View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20869_low_17 (Length: 604)

Name: NF20869_low_17
Description: NF20869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20869_low_17
NF20869_low_17
[»] chr3 (32 HSPs)
chr3 (30-301)||(18412657-18412928)
chr3 (30-306)||(5286737-5287013)
chr3 (30-301)||(5291183-5291454)
chr3 (30-301)||(18417169-18417440)
chr3 (33-263)||(27953447-27953677)
chr3 (208-306)||(18412933-18413031)
chr3 (462-560)||(1987233-1987331)
chr3 (462-560)||(19445929-19446027)
chr3 (462-560)||(19447754-19447852)
chr3 (196-282)||(35004131-35004216)
chr3 (324-408)||(4882684-4882769)
chr3 (324-408)||(19629209-19629294)
chr3 (324-382)||(19926885-19926943)
chr3 (318-408)||(4652719-4652811)
chr3 (462-527)||(19703237-19703302)
chr3 (318-382)||(14143123-14143187)
chr3 (462-549)||(15883941-15884028)
chr3 (462-549)||(15899120-15899207)
chr3 (317-408)||(15898962-15899054)
chr3 (508-580)||(32965837-32965909)
chr3 (462-549)||(15732397-15732484)
chr3 (462-549)||(15747482-15747569)
chr3 (508-582)||(4788055-4788129)
chr3 (508-582)||(4802893-4802967)
chr3 (530-591)||(5645513-5645574)
chr3 (530-591)||(5660936-5660997)
chr3 (317-408)||(15883783-15883875)
chr3 (326-408)||(15732248-15732331)
chr3 (326-408)||(15747333-15747416)
chr3 (462-549)||(16065225-16065312)
chr3 (462-549)||(37186455-37186542)
chr3 (1-29)||(3074615-3074643)
[»] chr4 (19 HSPs)
chr4 (29-301)||(53041643-53041915)
chr4 (30-301)||(19291857-19292128)
chr4 (30-282)||(11294467-11294715)
chr4 (30-173)||(15089749-15089891)
chr4 (324-408)||(6558741-6558825)
chr4 (462-560)||(15652987-15653085)
chr4 (340-408)||(17240115-17240183)
chr4 (462-560)||(4863961-4864060)
chr4 (115-267)||(44871882-44872026)
chr4 (324-408)||(17093667-17093752)
chr4 (324-408)||(15652855-15652940)
chr4 (462-549)||(1641468-1641555)
chr4 (508-594)||(13452743-13452829)
chr4 (326-408)||(14240715-14240798)
chr4 (462-527)||(26140577-26140642)
chr4 (194-247)||(44876011-44876064)
chr4 (508-580)||(5315566-5315638)
chr4 (530-592)||(1894189-1894251)
chr4 (530-592)||(1908989-1909051)
[»] chr6 (13 HSPs)
chr6 (30-263)||(21535012-21535245)
chr6 (316-408)||(27281609-27281701)
chr6 (462-560)||(12615831-12615929)
chr6 (462-589)||(16768856-16768983)
chr6 (318-408)||(25178155-25178245)
chr6 (324-408)||(34472845-34472930)
chr6 (324-382)||(17761336-17761394)
chr6 (462-549)||(30722407-30722494)
chr6 (324-382)||(14853286-14853344)
chr6 (489-549)||(17092965-17093025)
chr6 (530-594)||(22255861-22255925)
chr6 (338-367)||(7583812-7583841)
chr6 (344-408)||(20423151-20423215)
[»] chr8 (8 HSPs)
chr8 (30-306)||(19917266-19917544)
chr8 (30-301)||(19921681-19921954)
chr8 (462-560)||(19908191-19908289)
chr8 (462-549)||(15208735-15208822)
chr8 (326-408)||(15208888-15208971)
chr8 (508-582)||(18799506-18799580)
chr8 (462-549)||(22141752-22141839)
chr8 (462-549)||(29035206-29035293)
[»] chr5 (19 HSPs)
chr5 (30-282)||(66643-66893)
chr5 (30-282)||(62215-62465)
chr5 (462-560)||(22897231-22897329)
chr5 (326-408)||(24673209-24673292)
chr5 (326-408)||(24709983-24710066)
chr5 (326-408)||(24755747-24755830)
chr5 (324-382)||(3942423-3942481)
chr5 (336-408)||(24613592-24613665)
chr5 (336-408)||(24742987-24743060)
chr5 (462-549)||(18063296-18063383)
chr5 (324-408)||(24946058-24946143)
chr5 (336-408)||(24978924-24978997)
chr5 (462-527)||(27290840-27290905)
chr5 (532-594)||(11544084-11544146)
chr5 (532-594)||(11558142-11558204)
chr5 (530-594)||(22345863-22345927)
chr5 (317-368)||(16681193-16681244)
chr5 (462-543)||(34498659-34498740)
chr5 (462-549)||(30914592-30914679)
[»] scaffold0254 (1 HSPs)
scaffold0254 (30-280)||(736-984)
[»] chr7 (27 HSPs)
chr7 (27-267)||(35229507-35229744)
chr7 (30-267)||(35233492-35233726)
chr7 (462-560)||(4053676-4053775)
chr7 (462-560)||(15477884-15477983)
chr7 (462-560)||(4946662-4946760)
chr7 (470-560)||(39863767-39863857)
chr7 (324-408)||(10840735-10840819)
chr7 (462-594)||(11359570-11359702)
chr7 (462-549)||(14227086-14227173)
chr7 (463-549)||(13550637-13550723)
chr7 (317-408)||(15920124-15920217)
chr7 (462-549)||(48216292-48216379)
chr7 (462-548)||(5803659-5803745)
chr7 (317-408)||(16509403-16509496)
chr7 (317-408)||(18589950-18590043)
chr7 (317-408)||(18621642-18621735)
chr7 (468-589)||(30243144-30243265)
chr7 (317-368)||(16524519-16524570)
chr7 (317-408)||(14226928-14227021)
chr7 (468-589)||(16035220-16035341)
chr7 (317-408)||(16500108-16500201)
chr7 (313-408)||(4946810-4946904)
chr7 (530-594)||(18428354-18428418)
chr7 (326-408)||(5803510-5803593)
chr7 (338-367)||(6177519-6177548)
chr7 (313-408)||(30243005-30243099)
chr7 (497-549)||(39149225-39149277)
[»] chr1 (12 HSPs)
chr1 (30-296)||(28132428-28132690)
chr1 (30-282)||(42756212-42756469)
chr1 (30-247)||(28162654-28162870)
chr1 (84-282)||(5997781-5997978)
chr1 (463-589)||(20330587-20330713)
chr1 (324-408)||(16404189-16404273)
chr1 (462-589)||(20345031-20345158)
chr1 (462-549)||(21479887-21479974)
chr1 (317-408)||(21480040-21480132)
chr1 (229-301)||(25893272-25893345)
chr1 (30-84)||(25893347-25893401)
chr1 (367-408)||(9187444-9187485)
[»] scaffold0394 (1 HSPs)
scaffold0394 (30-280)||(681-929)
[»] scaffold0021 (3 HSPs)
scaffold0021 (462-560)||(97503-97601)
scaffold0021 (462-560)||(178416-178514)
scaffold0021 (339-408)||(59963-60032)
[»] chr2 (15 HSPs)
chr2 (324-408)||(18084380-18084464)
chr2 (462-560)||(27686339-27686437)
chr2 (324-408)||(17258808-17258892)
chr2 (462-549)||(13063427-13063514)
chr2 (317-408)||(20830046-20830138)
chr2 (462-549)||(20846797-20846884)
chr2 (317-408)||(20846950-20847042)
chr2 (508-580)||(15715191-15715263)
chr2 (468-589)||(21694602-21694723)
chr2 (468-589)||(21709332-21709453)
chr2 (495-591)||(29441313-29441408)
chr2 (462-549)||(26622013-26622100)
chr2 (468-589)||(17258622-17258743)
chr2 (462-519)||(20829923-20829980)
chr2 (468-560)||(19799982-19800074)
[»] scaffold0206 (1 HSPs)
scaffold0206 (462-572)||(19061-19171)
[»] scaffold0260 (3 HSPs)
scaffold0260 (462-589)||(7354-7481)
scaffold0260 (462-549)||(12908-12994)
scaffold0260 (338-408)||(12771-12843)
[»] scaffold0170 (1 HSPs)
scaffold0170 (462-560)||(203-301)
[»] scaffold0055 (1 HSPs)
scaffold0055 (339-408)||(8798-8867)
[»] scaffold0052 (1 HSPs)
scaffold0052 (339-408)||(75668-75737)
[»] scaffold0143 (1 HSPs)
scaffold0143 (324-408)||(21386-21470)
[»] scaffold0240 (1 HSPs)
scaffold0240 (324-382)||(22049-22107)
[»] scaffold0186 (1 HSPs)
scaffold0186 (462-594)||(15096-15228)
[»] scaffold0049 (1 HSPs)
scaffold0049 (324-382)||(36524-36582)
[»] scaffold1658 (1 HSPs)
scaffold1658 (462-527)||(772-837)


Alignment Details
Target: chr3 (Bit Score: 252; Significance: 1e-140; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 30 - 301
Target Start/End: Original strand, 18412657 - 18412928
Alignment:
Q  30 tgtcaatagaaataatggcaaatcaaattttataagattgtacatttatttgtaaatagttaaataatcattctatcaattagcataattagcagtaaat 129  Q
    ||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  18412657 tgtcaatggaattaatggcaaatcaaattttataagattgcacatttatttgtaaatagtcaaataatcattctatcaattagcataattagctgtaaat 18412756  T
Q  130 gtatatatgtcagtttagctaatttagtgggttgaaagtcaacttgaaagcttgtaattgcattgtatttatatgagaaatcagaatgaagagggacaca 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18412757 gtatatatgtcagtttagctaatttagtgggttgaaagtcaacttgaaagcttgtaattgcattgtatttatatgagaaatcagaatgaagagggacaca 18412856  T
Q  230 gttttgaccctcatttctcttagtctctctgagtttaaacatccctcatttcttagtttctttgagtctaac 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18412857 gttttgaccctcatttctcttagtctctctgagtttaaacatccctcatttcttagtttctttgagtctaac 18412928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 30 - 306
Target Start/End: Original strand, 5286737 - 5287013
Alignment:
Q  30 tgtcaatagaaataatggcaaatcaaattttataagattgtacatttatttgtaaatagttaaataatcattctatcaattagcataattagcagtaaat 129  Q
    ||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  5286737 tgtcaatggaattaatggcaaatcaaattttataagattgcacatttatttgtaaatagtcaaataatcattctatcaattagcataattagctgtaaat 5286836  T
Q  130 gtatatatgtcagtttagctaatttagtgggttgaaagtcaacttgaaagcttgtaattgcattgtatttatatgagaaatcagaatgaagagggacaca 229  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5286837 gtatatatgtcagtttagctaatttattgggttgaaagtcaacttgaaagcttgtaattgcattgtatttatatgagaaatcagaatgaagagggacaca 5286936  T
Q  230 gttttgaccctcatttctcttagtctctctgagtttaaacatccctcatttcttagtttctttgagtctaacctggt 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5286937 gttttgaccctcatttctcttagtctctctgagtttaaacatccctcatttcttagtttctttgagtctaacatggt 5287013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 30 - 301
Target Start/End: Original strand, 5291183 - 5291454
Alignment:
Q  30 tgtcaatagaaataatggcaaatcaaattttataagattgtacatttatttgtaaatagttaaataatcattctatcaattagcataattagcagtaaat 129  Q
    ||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  5291183 tgtcaatggaattaatggcaaatcaaattttataagattgcacatttatttgtaaatagtcaaataatcattctatcaattagcataattagctgtaaat 5291282  T
Q  130 gtatatatgtcagtttagctaatttagtgggttgaaagtcaacttgaaagcttgtaattgcattgtatttatatgagaaatcagaatgaagagggacaca 229  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5291283 gtatatatgtcagtttagctaatttattgggttgaaagtcaacttgaaagcttgtaattgcattgtatttatatgagaaatcagaatgaagagggacaca 5291382  T
Q  230 gttttgaccctcatttctcttagtctctctgagtttaaacatccctcatttcttagtttctttgagtctaac 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5291383 gttttgaccctcatttctcttagtctctctgagtttaaacatccctcatttcttagtttctttgagtctaac 5291454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 30 - 301
Target Start/End: Original strand, 18417169 - 18417440
Alignment:
Q  30 tgtcaatagaaataatggcaaatcaaattttataagattgtacatttatttgtaaatagttaaataatcattctatcaattagcataattagcagtaaat 129  Q
    ||||||| ||| ||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  18417169 tgtcaatggaattaatgacaaatcaaattttataagattgcacatttatttgtaaatagtcaaataatcattctatcaattagcataattagctgtaaat 18417268  T
Q  130 gtatatatgtcagtttagctaatttagtgggttgaaagtcaacttgaaagcttgtaattgcattgtatttatatgagaaatcagaatgaagagggacaca 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18417269 gtatatatgtcagtttagctaatttagtgggttgaaagtcaacttgaaagcttgtaattgcattgtatttatatgagaaatcagaatgaagaggtacaca 18417368  T
Q  230 gttttgaccctcatttctcttagtctctctgagtttaaacatccctcatttcttagtttctttgagtctaac 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18417369 gttttgaccctcatttctcttagtctctctgagtttaaacatccctcatttcttagtttctttgagtctaac 18417440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 33 - 263
Target Start/End: Complemental strand, 27953677 - 27953447
Alignment:
Q  33 caatagaaataatggcaaatcaaattttataagattgtacatttatttgtaaatagttaaataatcattctatcaattagcataattagcagtaaatgta 132  Q
    |||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  27953677 caatggaattaatggcaaatcaaattttataagattgcacatttatttgtaaatagtcaaataatcattctatcaattagcataattagctgtaaatgta 27953578  T
Q  133 tatatgtcagtttagctaatttagtgggttgaaagtcaacttgaaagcttgtaattgcattgtatttatatgagaaatcagaatgaagagggacacagtt 232  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27953577 tatatgtcaatttagctaatttagtgggttgaaagtcaacttgagagcttgtaattgccttgtatttatatgagaaatcagaatgaagagggacacagtt 27953478  T
Q  233 ttgaccctcatttctcttagtctctctgagt 263  Q
    ||||||||||||||||||||| |||||||||    
T  27953477 ttgaccctcatttctcttagtttctctgagt 27953447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 208 - 306
Target Start/End: Original strand, 18412933 - 18413031
Alignment:
Q  208 aatcagaatgaagagggacacagttttgaccctcatttctcttagtctctctgagtttaaacatccctcatttcttagtttctttgagtctaacctggt 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18412933 aatcagaatgaagagggacacagttttgaccctcatttctcttagtctctctgagtttaaacatccctcatttcttagtttctttgagtctaacatggt 18413031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 462 - 560
Target Start/End: Original strand, 1987233 - 1987331
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatc 560  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1987233 gatccttcgtgatcgtgcttgagttcgtcactgatggtgatgaattcgcactggaattgcgaaggaaatggttcaatgatgatgattcagtgatgaatc 1987331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 462 - 560
Target Start/End: Complemental strand, 19446027 - 19445929
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatc 560  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19446027 gatccttcgtgatcgtgcttgagttcgtcactgatggtgatgaattcgcactggaattgcgaaggaaatggttcaatgatgatgattcagtgatgaatc 19445929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 462 - 560
Target Start/End: Complemental strand, 19447852 - 19447754
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatc 560  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19447852 gatccttcgtgatcgtgcttgagttcgtcactgatggtgatgaattcgcactggaattgcgaaggaaatggttcaatgatgatgattcagtgatgaatc 19447754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 196 - 282
Target Start/End: Original strand, 35004131 - 35004216
Alignment:
Q  196 atttatatgagaaatcagaatgaagagggacacagttttgaccctcatttctcttagtctctctgagtttaaacatccctcatttct 282  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  35004131 atttatatgagaaatcagaatgaagggggatacagttttgaccctcatttctcttagtctctctgagttt-aatatccctcatttct 35004216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 324 - 408
Target Start/End: Complemental strand, 4882769 - 4882684
Alignment:
Q  324 ttggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttg-cgtgaatccgaaaataaatcgg 408  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||| | |   ||||||||||||||||||||    
T  4882769 ttggagattttgagcgaagatcttcggaaacacttgaacttgattctgtttgttgatttttggatttgaatccgaaaataaatcgg 4882684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 324 - 408
Target Start/End: Original strand, 19629209 - 19629294
Alignment:
Q  324 ttggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttg-cgtgaatccgaaaataaatcgg 408  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||| | |   ||||||||||||||||||||    
T  19629209 ttggagattttgagcgaagatcttcggaaacacttgaacttgattctgtttgttgatttttggatttgaatccgaaaataaatcgg 19629294  T

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Target: chr3; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 324 - 382
Target Start/End: Complemental strand, 19926943 - 19926885
Alignment:
Q  324 ttggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgattt 382  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||    
T  19926943 ttggagattttgagcgaagatcttcggaaacacttgaacttgattctgtttgttgattt 19926885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 318 - 408
Target Start/End: Complemental strand, 4652811 - 4652719
Alignment:
Q  318 tttcggttggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttg--cgtgaatccgaaaataaatcgg 408  Q
    ||||| |||||| |||  ||||||||||| |||||||||||||||||||||||||||| |||||| |||    ||||||||||||||||||||    
T  4652811 tttcgattggaggttttgagcgaagatctccggaaacacttgaacttgattctgtttgttgattttttggatttgaatccgaaaataaatcgg 4652719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 527
Target Start/End: Complemental strand, 19703302 - 19703237
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaagga 527  Q
    ||||| ||||||| |||||||| ||||||||  |||||||||| ||||||||||||||||||||||    
T  19703302 gatccttcgtgatcgtgcttgaattcgtcaccaatggtgatgaattcgcactggaattgcgaagga 19703237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 318 - 382
Target Start/End: Original strand, 14143123 - 14143187
Alignment:
Q  318 tttcggttggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgattt 382  Q
    |||| ||||||||||   || ||||||||||||||||||||||||||||||||||||| ||||||    
T  14143123 tttcagttggagattctgagagaagatcttcggaaacacttgaacttgattctgtttgttgattt 14143187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 462 - 549
Target Start/End: Original strand, 15883941 - 15884028
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattc 549  Q
    ||||| ||||||| |||||||| |||||| |  |||||||||| |||||||||||||||||| |||  || ||| |||||||||||||    
T  15883941 gatccttcgtgatcgtgcttgaattcgtcgccaatggtgatgaattcgcactggaattgcgagggatttgattcgatgatgatgattc 15884028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 462 - 549
Target Start/End: Original strand, 15899120 - 15899207
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattc 549  Q
    ||||| ||||||| |||||||| |||||| |  |||||||||| |||||||||||||||||| |||  || ||| |||||||||||||    
T  15899120 gatccttcgtgatcgtgcttgaattcgtcgccaatggtgatgaattcgcactggaattgcgagggatttgattcgatgatgatgattc 15899207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 317 - 408
Target Start/End: Original strand, 15898962 - 15899054
Alignment:
Q  317 ttttcggttggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttgc-gtgaatccgaaaataaatcgg 408  Q
    ||||| |||||||||||| | ||||||||||||||||||||||||  || ||||| ||| |||||| ||||  | || |||||||||||||||    
T  15898962 ttttcagttggagatttcgaacgaagatcttcggaaacacttgaatctggttctgcttgttgatttcttgctttaaaaccgaaaataaatcgg 15899054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 508 - 580
Target Start/End: Original strand, 32965837 - 32965909
Alignment:
Q  508 cgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatcgtcgagaactgtgatgaatt 580  Q
    ||||||||||||| ||||||   |||||||||||||||||||  |||||||||   |||||||||||||||||    
T  32965837 cgcactggaattgtgaaggattcggttcaatgatgatgattctttgatgaatcactgagaactgtgatgaatt 32965909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 462 - 549
Target Start/End: Original strand, 15732397 - 15732484
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattc 549  Q
    ||||| ||||||| |||||||| |||||| |  ||| |||||| ||||||||||||||||||||||  || ||| ||||||| |||||    
T  15732397 gatccttcgtgatcgtgcttgaattcgtcgccaatgctgatgaattcgcactggaattgcgaaggatttgattcgatgatgacgattc 15732484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 462 - 549
Target Start/End: Original strand, 15747482 - 15747569
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattc 549  Q
    ||||| ||||||| |||||||| |||||| |  ||| |||||| ||||||||||||||||||||||  || ||| ||||||| |||||    
T  15747482 gatccttcgtgatcgtgcttgaattcgtcgccaatgctgatgaattcgcactggaattgcgaaggatttgattcgatgatgacgattc 15747569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 508 - 582
Target Start/End: Original strand, 4788055 - 4788129
Alignment:
Q  508 cgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatcgtcgagaactgtgatgaatttg 582  Q
    ||||||||||||| ||||||   ||||| |||||||||||||  |||||||||   |||||||||||||||||||    
T  4788055 cgcactggaattgtgaaggattcggttcgatgatgatgattctttgatgaatcactgagaactgtgatgaatttg 4788129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 508 - 582
Target Start/End: Original strand, 4802893 - 4802967
Alignment:
Q  508 cgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatcgtcgagaactgtgatgaatttg 582  Q
    ||||||||||||| ||||||   ||||| |||||||||||||  |||||||||   |||||||||||||||||||    
T  4802893 cgcactggaattgtgaaggattcggttcgatgatgatgattctttgatgaatcactgagaactgtgatgaatttg 4802967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 530 - 591
Target Start/End: Complemental strand, 5645574 - 5645513
Alignment:
Q  530 tggttcaatgatgatgattcagtgatgaatcgtcgagaactgtgatgaatttggttgaatct 591  Q
    |||||| |||||||||||||  |||||||||   |||||| |||||||||||||||||||||    
T  5645574 tggttcgatgatgatgattctttgatgaatcactgagaaccgtgatgaatttggttgaatct 5645513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 530 - 591
Target Start/End: Complemental strand, 5660997 - 5660936
Alignment:
Q  530 tggttcaatgatgatgattcagtgatgaatcgtcgagaactgtgatgaatttggttgaatct 591  Q
    |||||| |||||||||||||  |||||||||   |||||| |||||||||||||||||||||    
T  5660997 tggttcgatgatgatgattctttgatgaatcactgagaaccgtgatgaatttggttgaatct 5660936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 408
Target Start/End: Original strand, 15883783 - 15883875
Alignment:
Q  317 ttttcggttggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttgc-gtgaatccgaaaataaatcgg 408  Q
    ||||| |||||||||||| |  |||||||||||||||||||||||  || ||||| ||| |||||| ||||  | || |||||||||||||||    
T  15883783 ttttcagttggagatttcgaatgaagatcttcggaaacacttgaatctggttctgcttgttgatttcttgctttaaaaccgaaaataaatcgg 15883875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 408
Target Start/End: Original strand, 15732248 - 15732331
Alignment:
Q  326 ggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttgc-gtgaatccgaaaataaatcgg 408  Q
    ||||||||  ||||||||||||||||||||||||||  || ||||| ||| |||||| ||||  | || |||||||||||||||    
T  15732248 ggagattttgagcgaagatcttcggaaacacttgaatctggttctgcttgttgatttcttgctttaaaaccgaaaataaatcgg 15732331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 408
Target Start/End: Original strand, 15747333 - 15747416
Alignment:
Q  326 ggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttgc-gtgaatccgaaaataaatcgg 408  Q
    ||||||||  ||||||||||||||||||||||||||  || ||||| ||| |||||| ||||  | || |||||||||||||||    
T  15747333 ggagattttgagcgaagatcttcggaaacacttgaatctggttctgcttgttgatttcttgctttaaaaccgaaaataaatcgg 15747416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 549
Target Start/End: Original strand, 16065225 - 16065312
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattc 549  Q
    ||||| ||||||| ||| |||| |||||| |  | |||||||| ||||||||||||||||||||| | || ||| ||||||| |||||    
T  16065225 gatccttcgtgatcgtgtttgaattcgtcgccaacggtgatgaattcgcactggaattgcgaagggattgattcgatgatgaagattc 16065312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 549
Target Start/End: Original strand, 37186455 - 37186542
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattc 549  Q
    ||||| ||||||| ||| |||| |||||| |  | |||||||| ||||||||||||||||||||||| || ||| | ||||| |||||    
T  37186455 gatccttcgtgatcgtgtttgaattcgtcgccaacggtgatgaattcgcactggaattgcgaaggaattgattcgacgatgaagattc 37186542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 3074643 - 3074615
Alignment:
Q  1 aactcaatctagtatttgaatgagtcaac 29  Q
    |||||||||||||||||||||||||||||    
T  3074643 aactcaatctagtatttgaatgagtcaac 3074615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 249; Significance: 1e-138; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 29 - 301
Target Start/End: Complemental strand, 53041915 - 53041643
Alignment:
Q  29 ctgtcaatagaaataatggcaaatcaaattttataagattgtacatttatttgtaaatagttaaataatcattctatcaattagcataattagcagtaaa 128  Q
    |||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  53041915 ctgtcaatggaattaatggcaaatcaaattttataagattgcacatttatttgtaaatagtcaaataatcattctatcaattagcataattagctgtaaa 53041816  T
Q  129 tgtatatatgtcagtttagctaatttagtgggttgaaagtcaacttgaaagcttgtaattgcattgtatttatatgagaaatcagaatgaagagggacac 228  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53041815 tgtatatatgtcagtttagctaatttattgggttgaaagtcaacttgaaagcttgtaattgcattgtatttatatgagaaatcagaatgaagagggacac 53041716  T
Q  229 agttttgaccctcatttctcttagtctctctgagtttaaacatccctcatttcttagtttctttgagtctaac 301  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53041715 agttttgaccctcatttctcttagtctctctgagtttaaacatccctcatttcttagtttctttgagtctaac 53041643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 30 - 301
Target Start/End: Complemental strand, 19292128 - 19291857
Alignment:
Q  30 tgtcaatagaaataatggcaaatcaaattttataagattgtacatttatttgtaaatagttaaataatcattctatcaattagcataattagcagtaaat 129  Q
    ||||||| ||| ||||||||||||||||| |||||||||| |||||||||||||| |||| | | ||||||||| |||||||||||||||||| ||||||    
T  19292128 tgtcaatggaattaatggcaaatcaaattctataagattgcacatttatttgtaa-tagtcataaaatcattctttcaattagcataattagctgtaaat 19292030  T
Q  130 gtatatatgtcagtttagctaatttagtgggttgaaagtcaacttgaaagcttgtaattgcattgtatttatatgagaaatcagaatgaagagggacaca 229  Q
     || ||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||| ||||||||||||||||||||||||||    
T  19292029 atacatatgtcagtttagctaatttagtgggttgaaagtcaacttgacagcttgtaaatacattgtatttatacgagaaatcagaatgaagagggacaca 19291930  T
Q  230 gttttgaccctcatttctcttagtctctctgagtttaaacatccctcatt--tcttagtttctttgagtctaac 301  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||| |||  ||||||||||| ||||||||||    
T  19291929 gttttgaccctcatttctcttggtctctctgagttt-aacatccctaatttctcttagtttctctgagtctaac 19291857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 30 - 282
Target Start/End: Original strand, 11294467 - 11294715
Alignment:
Q  30 tgtcaatagaaataatggcaaatcaaattttataagattgtacatttatttgtaaatagttaaataatcattctatcaattagcataattagcagtaaat 129  Q
    ||||||| ||| ||||||||||||||||| |||||||||| |||||||||||||| |||| |||||||||| || |||||||||||||||||| ||||||    
T  11294467 tgtcaatggaattaatggcaaatcaaattctataagattgcacatttatttgtaa-tagtcaaataatcatcctttcaattagcataattagctgtaaat 11294565  T
Q  130 gtatatatgtcagtttagctaatttagtgggttgaaagtcaacttgaaagcttgtaattgcattgtatttatatgagaaatcagaatgaagagggacaca 229  Q
     |||| | ||||||||||||||||||||||||||||||||||||||  | ||||||| |  |||||||||||||||||||||||||||||| |||| |||    
T  11294566 atatacacgtcagtttagctaatttagtgggttgaaagtcaacttggcaacttgtaaatagattgtatttatatgagaaatcagaatgaagggggataca 11294665  T
Q  230 gttttgaccctcatttctcttagtctctctgagtttaaacatccctcatttct 282  Q
    |||||||||||||||  ||||||||||| ||||||| || |||||||||||||    
T  11294666 gttttgaccctcatt--tcttagtctctttgagttt-aatatccctcatttct 11294715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 30 - 173
Target Start/End: Original strand, 15089749 - 15089891
Alignment:
Q  30 tgtcaatagaaataatggcaaatcaaattttataagattgtacatttatttgtaaatagttaaataatcattctatcaattagcataattagcagtaaat 129  Q
    ||||||| ||| ||||||||||||||||| |||||||||| ||||||||||| || |||| ||| |||||| || |||||||||||||||||| ||||||    
T  15089749 tgtcaatggaattaatggcaaatcaaattctataagattgcacatttatttgcaa-tagtcaaacaatcatcctttcaattagcataattagctgtaaat 15089847  T
Q  130 gtatatatgtcagtttagctaatttagtgggttgaaagtcaact 173  Q
     |||| ||||||||||||||||||||||||||||||||||||||    
T  15089848 atatacatgtcagtttagctaatttagtgggttgaaagtcaact 15089891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 324 - 408
Target Start/End: Original strand, 6558741 - 6558825
Alignment:
Q  324 ttggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttgcgtgaatccgaaaataaatcgg 408  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6558741 ttggagattttgagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttgcgtgaatccgaaaataaatcgg 6558825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 462 - 560
Target Start/End: Original strand, 15652987 - 15653085
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatc 560  Q
    ||||| ||||||| ||||||||||||||||||||| ||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  15652987 gatccttcgtgatcgtgcttgagttcgtcactgatagtgataaattcgcactggaattgcgaaggaaatggttcaatgatgatgattcagtgatgaatc 15653085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 340 - 408
Target Start/End: Complemental strand, 17240183 - 17240115
Alignment:
Q  340 aagatcttcggaaacacttgaacttgattctgtttgatgatttgttgcgtgaatccgaaaataaatcgg 408  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17240183 aagatcttcggaaacacttgagcttgattctgtttgatgatttgttgcgtgaatccgaaaataaatcgg 17240115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 462 - 560
Target Start/End: Complemental strand, 4864060 - 4863961
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaagg-aagtggttcaatgatgatgattcagtgatgaatc 560  Q
    ||||||||||||| ||||||||||| ||||||| | ||||||  ||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  4864060 gatccctcgtgatcgtgcttgagtttgtcactggtagtgatggattcgcactggaattgcgaaggaaaatggttcaatgatgatgattcagtgatgaatc 4863961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 115 - 267
Target Start/End: Complemental strand, 44872026 - 44871882
Alignment:
Q  115 taattagcagtaaatgtatatatgtcagtttagctaatttagtgggttgaaagtcaacttgaaagcttgtaattgcattgtatttatatgagaaatcaga 214  Q
    |||||||| ||||||||| |||   || |||||||||||| ||||||||||||||||||||| |        || |||||||||||||||||||| || |    
T  44872026 taattagctgtaaatgtacatacaacaatttagctaatttcgtgggttgaaagtcaacttgaca--------ttacattgtatttatatgagaaaccaca 44871935  T
Q  215 atgaagagggacacagttttgaccctcatttctcttagtctctctgagtttaa 267  Q
    |||||| |||| | ||||||||||||||||||||  ||| |||||||||||||    
T  44871934 atgaagtgggatatagttttgaccctcatttctcaaagtttctctgagtttaa 44871882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 324 - 408
Target Start/End: Complemental strand, 17093752 - 17093667
Alignment:
Q  324 ttggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttg-cgtgaatccgaaaataaatcgg 408  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||| | |   ||||||||||||||||||||    
T  17093752 ttggagattttgagcgaagatcttcggaaacacttgaacttgattctgtttgttgatttttggatttgaatccgaaaataaatcgg 17093667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 324 - 408
Target Start/End: Original strand, 15652855 - 15652940
Alignment:
Q  324 ttggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttg-cgtgaatccgaaaataaatcgg 408  Q
    ||||||||||  || ||||||||||||||||||||||||||||||||||||| |||||| | |   ||||||||||||||||||||    
T  15652855 ttggagattttgagtgaagatcttcggaaacacttgaacttgattctgtttgttgatttttggatttgaatccgaaaataaatcgg 15652940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 462 - 549
Target Start/End: Complemental strand, 1641555 - 1641468
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattc 549  Q
    ||||| ||||||| |||||||| ||||||||  |||||||||| ||||||||||||||||||||||  || ||| ||||||| |||||    
T  1641555 gatccttcgtgatcgtgcttgaattcgtcaccaatggtgatgaattcgcactggaattgcgaaggagttgattcgatgatgaagattc 1641468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 508 - 594
Target Start/End: Complemental strand, 13452829 - 13452743
Alignment:
Q  508 cgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatcgtcgagaactgtgatgaatttggttgaatctgtg 594  Q
    ||||||||||||| ||||||   ||||| |||||||||||||  |||||||||   |||||| ||||||||||||||||||||||||    
T  13452829 cgcactggaattgtgaaggattcggttcgatgatgatgattctttgatgaatcactgagaaccgtgatgaatttggttgaatctgtg 13452743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 408
Target Start/End: Original strand, 14240715 - 14240798
Alignment:
Q  326 ggagatttcaagcgaagatcttcg--gaaacacttgaacttgattctgtttgatgatttgttgcgtgaatccgaaaataaatcgg 408  Q
    ||||||||| | ||||||||||||  |||| ||||||||  | |||||||||||||||||||||||||| |||||||||||||||    
T  14240715 ggagatttcgaacgaagatcttcgaggaaaaacttgaacc-gcttctgtttgatgatttgttgcgtgaaaccgaaaataaatcgg 14240798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 527
Target Start/End: Original strand, 26140577 - 26140642
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaagga 527  Q
    ||||| ||||||| |||||||| ||||||||  |||||||||| ||||||||||||||||||||||    
T  26140577 gatccttcgtgatcgtgcttgaattcgtcaccaatggtgatgaattcgcactggaattgcgaagga 26140642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 247
Target Start/End: Complemental strand, 44876064 - 44876011
Alignment:
Q  194 gtatttatatgagaaatcagaatgaagagggacacagttttgaccctcatttct 247  Q
    |||||| |||||||||| |||||||||||||||||| |||||||||||||||||    
T  44876064 gtatttgtatgagaaattagaatgaagagggacacaattttgaccctcatttct 44876011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 508 - 580
Target Start/End: Complemental strand, 5315638 - 5315566
Alignment:
Q  508 cgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatcgtcgagaactgtgatgaatt 580  Q
    ||||||||||||| ||||||   |||||||||||||||||||  |||||||||   |||||||||||||||||    
T  5315638 cgcactggaattgtgaaggattcggttcaatgatgatgattctttgatgaatcactgagaactgtgatgaatt 5315566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 530 - 592
Target Start/End: Complemental strand, 1894251 - 1894189
Alignment:
Q  530 tggttcaatgatgatgattcagtgatgaatcgtcgagaactgtgatgaatttggttgaatctg 592  Q
    |||||| |||||||||||||  ||||||||||  ||||||||||| ||||||| |||||||||    
T  1894251 tggttcgatgatgatgattctttgatgaatcgctgagaactgtgacgaatttgattgaatctg 1894189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 530 - 592
Target Start/End: Complemental strand, 1909051 - 1908989
Alignment:
Q  530 tggttcaatgatgatgattcagtgatgaatcgtcgagaactgtgatgaatttggttgaatctg 592  Q
    |||||| |||||||||||||  |||||||||   ||||||||||| ||||||| |||||||||    
T  1909051 tggttcgatgatgatgattctttgatgaatcactgagaactgtgacgaatttgattgaatctg 1908989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 198; Significance: 1e-107; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 30 - 263
Target Start/End: Original strand, 21535012 - 21535245
Alignment:
Q  30 tgtcaatagaaataatggcaaatcaaattttataagattgtacatttatttgtaaatagttaaataatcattctatcaattagcataattagcagtaaat 129  Q
    ||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  21535012 tgtcaatggaattaatggcaaatcaaattttataagattgcacatttatttgtaaatagtcaaataatcattctatcaattagcataattagctgtaaat 21535111  T
Q  130 gtatatatgtcagtttagctaatttagtgggttgaaagtcaacttgaaagcttgtaattgcattgtatttatatgagaaatcagaatgaagagggacaca 229  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  21535112 gtatatatgccagtttagctaatttagtgggttgaaagtcaacttgaaagcctgtaattgcattgtatttatatgagaaatcagaatgaagagggacgca 21535211  T
Q  230 gttttgaccctcatttctcttagtctctctgagt 263  Q
    |||||||||||||||||||||||| |||||||||    
T  21535212 gttttgaccctcatttctcttagtttctctgagt 21535245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 316 - 408
Target Start/End: Original strand, 27281609 - 27281701
Alignment:
Q  316 attttcggttggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttgcgtgaatccgaaaataaatcgg 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  27281609 attttcggttggagatttcaagcgaagatcttcggaaacacttgaacttggttctgcttgatgatttgttgcgtgaatccgaaaataaatcgg 27281701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 462 - 560
Target Start/End: Complemental strand, 12615929 - 12615831
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatc 560  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| | | |||||||||||||||||||||||||||||||    
T  12615929 gatccttcgtgatcgtgcttgagttcgtcactgatggtgatgaattcgcactggaattgcgaacggaatggttcaatgatgatgattcagtgatgaatc 12615831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 462 - 589
Target Start/End: Original strand, 16768856 - 16768983
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatcg 561  Q
    ||||| ||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||| ||||||| ||||||||| ||||||     
T  16768856 gatccttcgtgatcgtgcttgagttcgtcactaatggtgatgaattcgcactggaattgcgaaggaaatggttcgatgatgaagattcagtgttgaatct 16768955  T
Q  562 tcgagaactgtgatgaatttggttgaat 589  Q
      ||||| ||||| ||||||| ||||||    
T  16768956 ctgagaattgtgacgaatttgcttgaat 16768983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 318 - 408
Target Start/End: Complemental strand, 25178245 - 25178155
Alignment:
Q  318 tttcggttggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttgcgtgaatccgaaaataaatcgg 408  Q
    |||| ||||||||||   || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25178245 tttcagttggagattctgagagaagaccttcggaaacacttgaacttgattctgtttgatgatttgttgcgtgaatccgaaaataaatcgg 25178155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 324 - 408
Target Start/End: Original strand, 34472845 - 34472930
Alignment:
Q  324 ttggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttg-cgtgaatccgaaaataaatcgg 408  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||| | |   ||||||||||||||||||||    
T  34472845 ttggagattttgagcgaagatcttcggaaacacttgaacttgattctgtttgttgatttttggatttgaatccgaaaataaatcgg 34472930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 324 - 382
Target Start/End: Original strand, 17761336 - 17761394
Alignment:
Q  324 ttggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgattt 382  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||    
T  17761336 ttggagattttgagcgaagatcttcggaaacacttgaacttgattctgtttgttgattt 17761394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 462 - 549
Target Start/End: Original strand, 30722407 - 30722494
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattc 549  Q
    ||||| |||||||  ||||||| ||||||||  |||||||||| ||||||||||||||||||||||| || ||| ||||||| |||||    
T  30722407 gatccttcgtgatcatgcttgaattcgtcaccaatggtgatgaattcgcactggaattgcgaaggaattgattcgatgatgaagattc 30722494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 324 - 382
Target Start/End: Complemental strand, 14853344 - 14853286
Alignment:
Q  324 ttggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgattt 382  Q
    ||||||||||  || ||||||||||||||||||||||||||||||||||||| ||||||    
T  14853344 ttggagattttgagagaagatcttcggaaacacttgaacttgattctgtttgttgattt 14853286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 489 - 549
Target Start/End: Original strand, 17092965 - 17093025
Alignment:
Q  489 tcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattc 549  Q
    |||||||||||||||| |||||||| ||||||||||||||  | ||| ||||||| |||||    
T  17092965 tcactgatggtgatgaattcgcactagaattgcgaaggaatggattcgatgatgaagattc 17093025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 530 - 594
Target Start/End: Original strand, 22255861 - 22255925
Alignment:
Q  530 tggttcaatgatgatgattcagtgatgaatcgtcgagaactgtgatgaatttggttgaatctgtg 594  Q
    |||||| |||||||||||||  |||||||||   |||||| |||||||||||| |||||||||||    
T  22255861 tggttcgatgatgatgattctttgatgaatcactgagaaccgtgatgaatttgattgaatctgtg 22255925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 367
Target Start/End: Complemental strand, 7583841 - 7583812
Alignment:
Q  338 cgaagatcttcggaaacacttgaacttgat 367  Q
    ||||||||||||||||||||||||||||||    
T  7583841 cgaagatcttcggaaacacttgaacttgat 7583812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 344 - 408
Target Start/End: Complemental strand, 20423215 - 20423151
Alignment:
Q  344 tcttcggaaacacttgaacttgattctgtttgatgatttgttgcgtgaatccgaaaataaatcgg 408  Q
    |||||||||||||||||   | |||||||||||||||||| |||  | | |||||||||||||||    
T  20423215 tcttcggaaacacttgattctcattctgtttgatgatttggtgctcggaaccgaaaataaatcgg 20423151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 163; Significance: 9e-87; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 163; E-Value: 9e-87
Query Start/End: Original strand, 30 - 306
Target Start/End: Original strand, 19917266 - 19917544
Alignment:
Q  30 tgtcaatagaaataatggcaaatcaaattttataagattgtacatttatttgtaaatagttaaataatcattctatcaattagcataattagcagtaaat 129  Q
    ||||||| ||| ||||||||||||||||| |||||||||| |||||||||||||| |||| ||||||||||||| |||||||||||||||||| ||||||    
T  19917266 tgtcaatggaattaatggcaaatcaaattctataagattgcacatttatttgtaa-tagtcaaataatcattctttcaattagcataattagctgtaaat 19917364  T
Q  130 gtatatatgtcagtttagctaatttagtgggttgaaagtcaacttgaaagcttgtaattgcattgtatttatatgagaaatcagaatgaagagggacaca 229  Q
     || ||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||| ||||||||||||||||||||||||     
T  19917365 atacatatgtcagtttagctaatttagtgggttgaaagtcaacttgacagcttgtaaatacattgtatttatatcagaaatcagaatgaagagggacacg 19917464  T
Q  230 g--ttttgaccctcatttctcttagtctctctgagtttaaacatccctcatt--tcttagtttctttgagtctaacctggt 306  Q
    |  ||||||||||||||||||||||||||| |  |||| ||||| |||||||  ||||||||||| |||||||||| ||||    
T  19917465 gttttttgaccctcatttctcttagtctctttttgttt-aacattcctcatttctcttagtttctctgagtctaacatggt 19917544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 30 - 301
Target Start/End: Original strand, 19921681 - 19921954
Alignment:
Q  30 tgtcaatagaaataatggcaaatcaaattttataagattgtacatttatttgtaaatagttaaataatcattctatcaattagcataattagcagtaaat 129  Q
    ||||||| ||| |||||||| |||| ||| |||||||||| |||||||||| ||| |||| ||||||||||||| |||||||||||||||||| ||||||    
T  19921681 tgtcaatggaattaatggcatatcacattctataagattgcacatttatttataa-tagtcaaataatcattctttcaattagcataattagctgtaaat 19921779  T
Q  130 gtatatatgtcagtttagctaatttagtgggttgaaagtcaacttgaaagcttgtaattgcattgtatttatatgagaaatcagaatgaagagggacaca 229  Q
     || ||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||| | | |||| |||||| ||||||| ||||||||||    
T  19921780 atacatatgtcagtttagctaatttagtgggttgaaagtcaacttgacagcttgtaaatacattgcactgatatcagaaattagaatgaggagggacaca 19921879  T
Q  230 g--ttttgaccctcatttctcttagtctctctgagtttaaacatccctca--tttcttagtttctttgagtctaac 301  Q
    |  ||||||||||||||||||||||||||| ||||||| |||||||||||  ||||||||||||| ||||||||||    
T  19921880 gttttttgaccctcatttctcttagtctctatgagttt-aacatccctcatttttcttagtttctctgagtctaac 19921954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 462 - 560
Target Start/End: Original strand, 19908191 - 19908289
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatc 560  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||| ||||||||||||||||    
T  19908191 gatccttcgtgatcgtgcttgagttcgtcactgatggtgatgaattcgcactggaattgcgaagggaatggttcaatgatgacgattcagtgatgaatc 19908289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 462 - 549
Target Start/End: Complemental strand, 15208822 - 15208735
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattc 549  Q
    ||||| ||||||| |||||||| |||||| |  |||||||||| ||||||||||||||||||||||  || ||| ||||||| |||||    
T  15208822 gatccttcgtgatcgtgcttgaattcgtcgccaatggtgatgaattcgcactggaattgcgaaggatttgattcgatgatgacgattc 15208735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 326 - 408
Target Start/End: Complemental strand, 15208971 - 15208888
Alignment:
Q  326 ggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttgc-gtgaatccgaaaataaatcgg 408  Q
    ||||||||  ||||||||||||||||||||||||||  |||||||| ||| |||||| ||||  | || |||||||||||||||    
T  15208971 ggagattttgagcgaagatcttcggaaacacttgaatctgattctgcttgttgatttcttgctttaaaaccgaaaataaatcgg 15208888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 508 - 582
Target Start/End: Complemental strand, 18799580 - 18799506
Alignment:
Q  508 cgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatcgtcgagaactgtgatgaatttg 582  Q
    ||||||||||||| ||||||   ||||| |||||||||||||  |||||||||   |||||||||||||||||||    
T  18799580 cgcactggaattgtgaaggattcggttcgatgatgatgattctttgatgaatcactgagaactgtgatgaatttg 18799506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 549
Target Start/End: Complemental strand, 22141839 - 22141752
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattc 549  Q
    ||||| ||||||| ||| |||| |||||| |  | |||||||| ||||||||||||||||||||| | || ||| ||||||| |||||    
T  22141839 gatccttcgtgatcgtgtttgaattcgtcgccaacggtgatgaattcgcactggaattgcgaagggattgattcgatgatgaagattc 22141752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 549
Target Start/End: Complemental strand, 29035293 - 29035206
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattc 549  Q
    ||||| ||||||| ||| |||| |||||| |  | |||||||| ||||||||||||||||||||| | || ||| ||||||| |||||    
T  29035293 gatccttcgtgatcgtgtttgaattcgtcgccaacggtgatgaattcgcactggaattgcgaagggattgattcgatgatgaagattc 29035206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 161; Significance: 1e-85; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 30 - 282
Target Start/End: Original strand, 66643 - 66893
Alignment:
Q  30 tgtcaatagaaataatggcaaatcaaattttataagattgtacatttatttgtaaatagttaaataatcattctatcaattagcataattagcagtaaat 129  Q
    ||||||| ||| ||||||||||||||||| |||||||||| |||||||||||||| |||| |||||||||| || |||||||||||||||||| ||||||    
T  66643 tgtcaatggaattaatggcaaatcaaattctataagattgcacatttatttgtaa-tagtcaaataatcatcctttcaattagcataattagctgtaaat 66741  T
Q  130 gtatatatgtcagtttagctaatttagtgggttgaaagtcaacttgaaagcttgtaattgcattgtatttatatgagaaatcagaatgaagagggacaca 229  Q
     |||| | ||||||||||||||||||||||||||||||||||||||  | ||||||| | ||||||||||||||||||||||||||||||| |||| |||    
T  66742 atatacacgtcagtttagctaatttagtgggttgaaagtcaacttggcaacttgtaaatacattgtatttatatgagaaatcagaatgaagggggataca 66841  T
Q  230 gttttgaccctcatttctcttagtctctctgagtttaaacatccctcatttct 282  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  66842 gttttgaccctcatttctcttagtctctctgagttt-aatatccctcatttct 66893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 30 - 282
Target Start/End: Original strand, 62215 - 62465
Alignment:
Q  30 tgtcaatagaaataatggcaaatcaaattttataagattgtacatttatttgtaaatagttaaataatcattctatcaattagcataattagcagtaaat 129  Q
    ||||||| ||| ||||||||||||||||| ||||||||||  ||||||||||||| |||| |||||||||| || |||||||||||||||||| ||||||    
T  62215 tgtcaatggaattaatggcaaatcaaattctataagattgcgcatttatttgtaa-tagtcaaataatcatcctttcaattagcataattagctgtaaat 62313  T
Q  130 gtatatatgtcagtttagctaatttagtgggttgaaagtcaacttgaaagcttgtaattgcattgtatttatatgagaaatcagaatgaagagggacaca 229  Q
     |||| ||| ||||||||||||||||||||||||||||||||||||  | ||||||| | ||||||||||||||||||||||||||||||| |||| |||    
T  62314 atatacatgccagtttagctaatttagtgggttgaaagtcaacttggcaacttgtaaatacattgtatttatatgagaaatcagaatgaagggggataca 62413  T
Q  230 gttttgaccctcatttctcttagtctctctgagtttaaacatccctcatttct 282  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  62414 gttttgaccctcatttctcttagtctctctgagttt-aatatccctcatttct 62465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 462 - 560
Target Start/End: Complemental strand, 22897329 - 22897231
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatc 560  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22897329 gatccttcgtgatcgtgcttgagttcgtcactgatggtgatgaattcgcgctggaattgcgaaggaaatggttcaatgatgatgattcagtgatgaatc 22897231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 326 - 408
Target Start/End: Original strand, 24673209 - 24673292
Alignment:
Q  326 ggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttg-cgtgaatccgaaaataaatcgg 408  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||| | |   ||||||||||||||||||||    
T  24673209 ggagattttgagcgaagatcttcggaaacacttgaacttgattctgtttgttgatttttggatttgaatccgaaaataaatcgg 24673292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 326 - 408
Target Start/End: Original strand, 24709983 - 24710066
Alignment:
Q  326 ggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttg-cgtgaatccgaaaataaatcgg 408  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||| | |   ||||||||||||||||||||    
T  24709983 ggagattttgagcgaagatcttcggaaacacttgaacttgattctgtttgttgatttttggatttgaatccgaaaataaatcgg 24710066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 326 - 408
Target Start/End: Original strand, 24755747 - 24755830
Alignment:
Q  326 ggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttg-cgtgaatccgaaaataaatcgg 408  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||| | |   ||||||||||||||||||||    
T  24755747 ggagattttgagcgaagatcttcggaaacacttgaacttgattctgtttgttgatttttggatttgaatccgaaaataaatcgg 24755830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 324 - 382
Target Start/End: Complemental strand, 3942481 - 3942423
Alignment:
Q  324 ttggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgattt 382  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||    
T  3942481 ttggagattttgagcgaagatcttcggaaacacttgaacttgattctgtttgttgattt 3942423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 24613592 - 24613665
Alignment:
Q  336 agcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttg-cgtgaatccgaaaataaatcgg 408  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| | |   ||||||||||||||||||||    
T  24613592 agcgaagatcttcggaaacacttgaacttgattctgtttgttgatttttggatttgaatccgaaaataaatcgg 24613665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 24742987 - 24743060
Alignment:
Q  336 agcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttg-cgtgaatccgaaaataaatcgg 408  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| | |   ||||||||||||||||||||    
T  24742987 agcgaagatcttcggaaacacttgaacttgattctgtttgttgatttttggatttgaatccgaaaataaatcgg 24743060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 462 - 549
Target Start/End: Original strand, 18063296 - 18063383
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattc 549  Q
    ||||| ||||||| |||||||| |||||| |  |||||||||| ||||||||||||||||||||||  || ||| |||||||||||||    
T  18063296 gatccttcgtgatcgtgcttgaattcgtcgccaatggtgatgaattcgcactggaattgcgaaggatttgattcgatgatgatgattc 18063383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 324 - 408
Target Start/End: Complemental strand, 24946143 - 24946058
Alignment:
Q  324 ttggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttg-cgtgaatccgaaaataaatcgg 408  Q
    ||||||||||  ||||||||||||||||||||||||||||||||| |||||| | |||| | |   ||||||||||||||||||||    
T  24946143 ttggagattttgagcgaagatcttcggaaacacttgaacttgattttgtttgctaatttttggatttgaatccgaaaataaatcgg 24946058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 24978997 - 24978924
Alignment:
Q  336 agcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttg-cgtgaatccgaaaataaatcgg 408  Q
    |||||||||||||||||||||||||||||||||||||||| | |||| | |   ||||||||||||||||||||    
T  24978997 agcgaagatcttcggaaacacttgaacttgattctgtttgctaatttttggatttgaatccgaaaataaatcgg 24978924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 527
Target Start/End: Original strand, 27290840 - 27290905
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaagga 527  Q
    ||||| ||||||| |||||||| ||||||||  |||||||||| ||||||||||||||||||||||    
T  27290840 gatccttcgtgatcgtgcttgaattcgtcaccaatggtgatgaattcgcactggaattgcgaagga 27290905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 532 - 594
Target Start/End: Complemental strand, 11544146 - 11544084
Alignment:
Q  532 gttcaatgatgatgattcagtgatgaatcgtcgagaactgtgatgaatttggttgaatctgtg 594  Q
    |||| |||||||||||||  |||||||||   |||||||||||||||||||||||||||||||    
T  11544146 gttcgatgatgatgattctttgatgaatcactgagaactgtgatgaatttggttgaatctgtg 11544084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 532 - 594
Target Start/End: Complemental strand, 11558204 - 11558142
Alignment:
Q  532 gttcaatgatgatgattcagtgatgaatcgtcgagaactgtgatgaatttggttgaatctgtg 594  Q
    |||| |||||||||||||  |||||||||   |||||||||||||||||||||||||||||||    
T  11558204 gttcgatgatgatgattctttgatgaatcactgagaactgtgatgaatttggttgaatctgtg 11558142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 530 - 594
Target Start/End: Complemental strand, 22345927 - 22345863
Alignment:
Q  530 tggttcaatgatgatgattcagtgatgaatcgtcgagaactgtgatgaatttggttgaatctgtg 594  Q
    |||||| |||||||||||||  |||||||||   |||||| ||||||||||||||||||||||||    
T  22345927 tggttcgatgatgatgattctttgatgaatcactgagaaccgtgatgaatttggttgaatctgtg 22345863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 317 - 368
Target Start/End: Complemental strand, 16681244 - 16681193
Alignment:
Q  317 ttttcggttggagatttcaagcgaagatcttcggaaacacttgaacttgatt 368  Q
    ||||| ||||||||| |  |||||||||||||||||||||||||||||||||    
T  16681244 ttttcagttggagatcttgagcgaagatcttcggaaacacttgaacttgatt 16681193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 543
Target Start/End: Original strand, 34498659 - 34498740
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatga 543  Q
    ||||| ||||||| ||| |||| ||||||||  | |||||||| ||||||||||||||||||||| | || ||| |||||||    
T  34498659 gatccttcgtgatcgtgtttgaattcgtcaccaacggtgatgaattcgcactggaattgcgaagggattgattcgatgatga 34498740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 549
Target Start/End: Original strand, 30914592 - 30914679
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattc 549  Q
    ||||| ||||||| |||||||| |||||  |  |||||||||| || ||||| |||||||||||||| || ||| ||||||| |||||    
T  30914592 gatccttcgtgatcgtgcttgaattcgttgccaatggtgatgaatttgcactagaattgcgaaggaactgattcgatgatgaagattc 30914679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 155; Significance: 5e-82; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 30 - 280
Target Start/End: Original strand, 736 - 984
Alignment:
Q  30 tgtcaatagaaataatggcaaatcaaattttataagattgtacatttatttgtaaatagttaaataatcattctatcaattagcataattagcagtaaat 129  Q
    ||||||| ||| ||||||||||||||||| |||||||||| |||||||||||||| |||| |||||||||| || |||||||||||||||||| ||||||    
T  736 tgtcaatggaattaatggcaaatcaaattctataagattgcacatttatttgtaa-tagtcaaataatcatcctttcaattagcataattagctgtaaat 834  T
Q  130 gtatatatgtcagtttagctaatttagtgggttgaaagtcaacttgaaagcttgtaattgcattgtatttatatgagaaatcagaatgaagagggacaca 229  Q
     |||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| |  |||||||||||||||||||||||||| |||  ||| |||    
T  835 atatacatgtcagtttagctaatttagtgggttgaaagtcaacttgacaacttgtaaatatattgtatttatatgagaaatcagaataaaggaggataca 934  T
Q  230 gttttgaccctcatttctcttagtctctctgagtttaaacatccctcattt 280  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||    
T  935 gttttgaccctcatttctcttagtctctctgagttt-aatatccctcattt 984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 150; Significance: 5e-79; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 27 - 267
Target Start/End: Original strand, 35229507 - 35229744
Alignment:
Q  27 aactgtcaatagaaataatggcaaatcaaattttataagattgtacatttatttgtaaatagttaaataatcattctatcaattagcataattagcagta 126  Q
    |||||||||| ||| ||||||||||||||||| |||||||||| |||||||||||||| |||| |||||||||| || |||||||||||||||||| |||    
T  35229507 aactgtcaatggaattaatggcaaatcaaattctataagattgcacatttatttgtaa-tagtcaaataatcatcctttcaattagcataattagctgta 35229605  T
Q  127 aatgtatatatgtcagtttagctaatttagtgggttgaaagtcaacttgaaagcttgtaattgcattgtatttatatgagaaatcagaatgaagagggac 226  Q
    ||| |||| | ||||||||||||||||||||||||||||||||||||||  | ||||||| | ||||||||||||||||||||||||||||||| ||||     
T  35229606 aatatatacacgtcagtttagctaatttagtgggttgaaagtcaacttggcaacttgtaaatacattgtatttatatgagaaatcagaatgaagggggat 35229705  T
Q  227 acagttttgaccctcatttctcttagtctctctgagtttaa 267  Q
    ||||||||||||||||||  |||||||||||||||||||||    
T  35229706 acagttttgaccctcatt--tcttagtctctctgagtttaa 35229744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 30 - 267
Target Start/End: Original strand, 35233492 - 35233726
Alignment:
Q  30 tgtcaatagaaataatggcaaatcaaattttataagattgtacatttatttgtaaatagttaaataatcattctatcaattagcataattagcagtaaat 129  Q
    ||||||| ||| ||||||||||||||||| |||||||||| |||||||||||||| |||| |||||||||| || |||||||||||||||||  ||||||    
T  35233492 tgtcaatggaattaatggcaaatcaaattctataagattgcacatttatttgtaa-tagtcaaataatcatcctttcaattagcataattagttgtaaat 35233590  T
Q  130 gtatatatgtcagtttagctaatttagtgggttgaaagtcaacttgaaagcttgtaattgcattgtatttatatgagaaatcagaatgaagagggacaca 229  Q
     |||| | ||||||||||||||||||||||||||||||||||||||  | ||||||| | ||||||||||||||||||||||||||||||| |||| |||    
T  35233591 atatacacgtcagtttagctaatttagtgggttgaaagtcaacttggcaacttgtaaatacattgtatttatatgagaaatcagaatgaagggggataca 35233690  T
Q  230 gttttgaccctcatttctcttagtctctctgagtttaa 267  Q
    |||||||||||||||  |||||||||||||||||||||    
T  35233691 gttttgaccctcatt--tcttagtctctctgagtttaa 35233726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 462 - 560
Target Start/End: Complemental strand, 4053775 - 4053676
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaagg-aagtggttcaatgatgatgattcagtgatgaatc 560  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  4053775 gatccttcgtgatcgtgcttgagttcgtcactgatggtgatgaattcgcactggaattgcgaaggaaaatggttcaatgatgatgattcagtgatgaatc 4053676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 462 - 560
Target Start/End: Complemental strand, 15477983 - 15477884
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaagg-aagtggttcaatgatgatgattcagtgatgaatc 560  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  15477983 gatccttcgtgatcgtgcttgagttcgtcactgatggtgatgaattcgcactggaattgcgaaggaaaatggttcaatgatgatgattcagtgatgaatc 15477884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 462 - 560
Target Start/End: Complemental strand, 4946760 - 4946662
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatc 560  Q
    ||||| ||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||    
T  4946760 gatccttcgtgatcgtgcttgagttcgtcactgacggtgatgaattcgcactggaattgcgaagggaatggttcaatgatgatggttcagtgatgaatc 4946662  T

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Target: chr7; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 470 - 560
Target Start/End: Original strand, 39863767 - 39863857
Alignment:
Q  470 gtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatc 560  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||| ||||    
T  39863767 gtgatcgtgcttgagttcgtcactgatggtgatgaattcgcactggaattgcgaagggaatggttcaatgatgatgattcagtgattaatc 39863857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 324 - 408
Target Start/End: Original strand, 10840735 - 10840819
Alignment:
Q  324 ttggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttgcgtgaatccgaaaataaatcgg 408  Q
    ||||||||||  ||||||||||||||||||||||||||||||||| |||||| |||||| |  | ||||||||||||||||||||    
T  10840735 ttggagattttgagcgaagatcttcggaaacacttgaacttgattttgtttgttgatttttgacttgaatccgaaaataaatcgg 10840819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 462 - 594
Target Start/End: Complemental strand, 11359702 - 11359570
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatcg 561  Q
    ||||| ||||||| |||||||  |||||  || | ||||| || | ||||||||||||| ||||||   ||||| |||||||||||||  |||||||||     
T  11359702 gatccttcgtgatcgtgcttggattcgttgctaacggtgacgaatccgcactggaattgtgaaggattcggttcgatgatgatgattctttgatgaatca 11359603  T
Q  562 tcgagaactgtgatgaatttggttgaatctgtg 594  Q
      |||||| ||||||||||||||||||||||||    
T  11359602 ctgagaaccgtgatgaatttggttgaatctgtg 11359570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 462 - 549
Target Start/End: Original strand, 14227086 - 14227173
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattc 549  Q
    ||||| ||||||| |||||||| |||||| |  |||||||||| ||||||||||||||||||||||| || ||| ||||||| |||||    
T  14227086 gatccttcgtgatcgtgcttgaattcgtcgccaatggtgatgaattcgcactggaattgcgaaggaattgattcgatgatgaagattc 14227173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 463 - 549
Target Start/End: Original strand, 13550637 - 13550723
Alignment:
Q  463 atccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattc 549  Q
    |||| ||||||| |||||||| |||||| |  |||||||||| ||||||||||||||||||||||  || ||| |||||||||||||    
T  13550637 atccttcgtgatcgtgcttgaattcgtcgccaatggtgatgaattcgcactggaattgcgaaggatttgattcgatgatgatgattc 13550723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 408
Target Start/End: Original strand, 15920124 - 15920217
Alignment:
Q  317 ttttcggttggagatttcaagcgaagatcttcggaaacacttgaacttga-ttctgtttgatgatttgttgc-gtgaatccgaaaataaatcgg 408  Q
    ||||| |||||||||||  ||||||||||||||||||||||||||||||| || |||||| |||||| | ||  |||| |||||||||||||||    
T  15920124 ttttcagttggagattttgagcgaagatcttcggaaacacttgaacttgatttttgtttgttgatttctggctttgaaaccgaaaataaatcgg 15920217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 462 - 549
Target Start/End: Complemental strand, 48216379 - 48216292
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattc 549  Q
    ||||| ||||||| |||||||| |||||| |  |||||||||| ||||||||||||||||||||||  || ||| ||||||| |||||    
T  48216379 gatccttcgtgatcgtgcttgaattcgtcgccaatggtgatgaattcgcactggaattgcgaaggatttgattcgatgatgaagattc 48216292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 462 - 548
Target Start/End: Original strand, 5803659 - 5803745
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgatt 548  Q
    ||||| ||||||| |||||||| |||||| |  ||| |||||| ||||||||||||||||||||||  || ||| ||||||||||||    
T  5803659 gatccttcgtgatcgtgcttgaattcgtcgccaatgttgatgaattcgcactggaattgcgaaggatttgattcgatgatgatgatt 5803745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 317 - 408
Target Start/End: Original strand, 16509403 - 16509496
Alignment:
Q  317 ttttcggttggagatttcaagcgaagatcttcggaaacacttgaacttgattct-gtttgatgatttgttgc-gtgaatccgaaaataaatcgg 408  Q
    ||||| ||||||||| |  ||||||||||||||||||||||||||||||||| | ||||| |||||| | ||  |||| |||||||||||||||    
T  16509403 ttttcagttggagatcttgagcgaagatcttcggaaacacttgaacttgattttcgtttgttgatttctggctttgaaaccgaaaataaatcgg 16509496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 317 - 408
Target Start/End: Original strand, 18589950 - 18590043
Alignment:
Q  317 ttttcggttggagatttcaagcgaagatcttcggaaacacttgaacttgattct-gtttgatgatttgttgc-gtgaatccgaaaataaatcgg 408  Q
    ||||| ||||||||| |  ||||||||||||||||||||||||||||||||| | ||||| |||||| | ||  |||| |||||||||||||||    
T  18589950 ttttcagttggagatcttgagcgaagatcttcggaaacacttgaacttgattttcgtttgttgatttctagctttgaaaccgaaaataaatcgg 18590043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 317 - 408
Target Start/End: Complemental strand, 18621735 - 18621642
Alignment:
Q  317 ttttcggttggagatttcaagcgaagatcttcggaaacacttgaacttgattct-gtttgatgatttgttgc-gtgaatccgaaaataaatcgg 408  Q
    ||||| ||||||||| |  ||||||||||||||||||||||||||||||||| | ||||| |||||| | ||  |||| |||||||||||||||    
T  18621735 ttttcagttggagatcttgagcgaagatcttcggaaacacttgaacttgattttcgtttgttgatttctagctttgaaaccgaaaataaatcgg 18621642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 468 - 589
Target Start/End: Original strand, 30243144 - 30243265
Alignment:
Q  468 tcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatcgtcgaga 567  Q
    ||||||| |||||||||||||||||  |  ||||||  |||||||| | ||||||||| |  || ||||||||||| ||||||||| ||||||   ||||    
T  30243144 tcgtgatcgtgcttgagttcgtcaccaacagtgatggattcgcacttgtattgcgaagaagctgattcaatgatgaagattcagtgttgaatctctgaga 30243243  T
Q  568 actgtgatgaatttggttgaat 589  Q
    | ||||| ||||||| ||||||    
T  30243244 attgtgacgaatttgcttgaat 30243265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 317 - 368
Target Start/End: Original strand, 16524519 - 16524570
Alignment:
Q  317 ttttcggttggagatttcaagcgaagatcttcggaaacacttgaacttgatt 368  Q
    ||||| ||||||||| |  |||||||||||||||||||||||||||||||||    
T  16524519 ttttcagttggagatcttgagcgaagatcttcggaaacacttgaacttgatt 16524570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 317 - 408
Target Start/End: Original strand, 14226928 - 14227021
Alignment:
Q  317 ttttcggttggagatttcaagcgaagatcttcggaaacacttgaacttga-ttctgtttgatgatttgttgc-gtgaatccgaaaataaatcgg 408  Q
    ||||||||||||  |||  | ||||||||||||||||||||||||||||| || |||||| |||||| | ||  |||| |||||||||||||||    
T  14226928 ttttcggttggatcttttgaacgaagatcttcggaaacacttgaacttgatttttgtttgttgatttctggctttgaaaccgaaaataaatcgg 14227021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 468 - 589
Target Start/End: Complemental strand, 16035341 - 16035220
Alignment:
Q  468 tcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatcgtcgaga 567  Q
    ||||||| |||||||||| ||||||  |  ||||||  |||||||| | |||||||||||   | ||||||||||| ||||||||| ||||||   ||||    
T  16035341 tcgtgatcgtgcttgagtccgtcaccaacagtgatggattcgcacttgtattgcgaaggagccgattcaatgatgaagattcagtgttgaatctctgaga 16035242  T
Q  568 actgtgatgaatttggttgaat 589  Q
    | ||||| ||||||| ||||||    
T  16035241 attgtgacgaatttgcttgaat 16035220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 317 - 408
Target Start/End: Original strand, 16500108 - 16500201
Alignment:
Q  317 ttttcggttggagatttcaagcgaagatcttcggaaacacttgaacttgattct-gtttgatgatttgttgc-gtgaatccgaaaataaatcgg 408  Q
    ||||| ||||||||| |  || |||||||||||||||||||||||||||||| | ||||| |||||| | ||  |||| |||||||||||||||    
T  16500108 ttttcagttggagatcttgagggaagatcttcggaaacacttgaacttgattttcgtttgttgatttctggctttgaaaccgaaaataaatcgg 16500201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 408
Target Start/End: Complemental strand, 4946904 - 4946810
Alignment:
Q  313 gtgattttcggttggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgatt-tgttgcgtgaatccgaaaataaatcgg 408  Q
    |||||||||||||||||||||| | | ||| |||||||||| ||||  | ||||||||||||| ||||| | | || ||||||||||||||||||||    
T  4946904 gtgattttcggttggagatttcgaac-aagttcttcggaaa-acttcgatttgattctgtttgttgattatctggcttgaatccgaaaataaatcgg 4946810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 530 - 594
Target Start/End: Complemental strand, 18428418 - 18428354
Alignment:
Q  530 tggttcaatgatgatgattcagtgatgaatcgtcgagaactgtgatgaatttggttgaatctgtg 594  Q
    |||||| |||||||||||||  |||||||||   |||||| |||||||||||| |||||||||||    
T  18428418 tggttcgatgatgatgattctttgatgaatcactgagaaccgtgatgaatttgattgaatctgtg 18428354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 408
Target Start/End: Original strand, 5803510 - 5803593
Alignment:
Q  326 ggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttgc-gtgaatccgaaaataaatcgg 408  Q
    ||||||||  ||||||||||||||||||||||||||  || ||||| ||| |||||| ||||  | || |||||||||||||||    
T  5803510 ggagattttgagcgaagatcttcggaaacacttgaatctggttctgcttgttgatttcttgcttttaaaccgaaaataaatcgg 5803593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 367
Target Start/End: Complemental strand, 6177548 - 6177519
Alignment:
Q  338 cgaagatcttcggaaacacttgaacttgat 367  Q
    ||||||||||||||||||||||||||||||    
T  6177548 cgaagatcttcggaaacacttgaacttgat 6177519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 408
Target Start/End: Original strand, 30243005 - 30243099
Alignment:
Q  313 gtgattttcggttggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttg-cgtgaatccgaaaataaatcgg 408  Q
    ||||||||  |||||||||||| | | |||||||||||||| ||||  | ||||||||||||| ||||||  || | ||||||||||||||||||||    
T  30243005 gtgatttttagttggagatttcgaac-aagatcttcggaaa-acttcgatttgattctgtttgctgattttctgacttgaatccgaaaataaatcgg 30243099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 549
Target Start/End: Complemental strand, 39149277 - 39149225
Alignment:
Q  497 ggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattc 549  Q
    |||||||| ||||||||||||||||||||| | || ||| ||||||| |||||    
T  39149277 ggtgatgaattcgcactggaattgcgaagggattgattcgatgatgaagattc 39149225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 148; Significance: 8e-78; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 30 - 296
Target Start/End: Original strand, 28132428 - 28132690
Alignment:
Q  30 tgtcaatagaaataatggcaaatcaaattttataagattgtacatttatttgtaaatagttaaataatcattctatcaattagcataattagcagtaaat 129  Q
    ||||||| ||| ||||||||||||||||| |||||||||| |||||||||||||| |||| |||||||||| || |||||||||||||||||| ||||||    
T  28132428 tgtcaatggaattaatggcaaatcaaattctataagattgcacatttatttgtaa-tagtcaaataatcatcctttcaattagcataattagctgtaaat 28132526  T
Q  130 gtatatatgtcagtttagctaatttagtgggttgaaagtcaacttgaaagcttgtaattgcattgtatttatatgagaaatcagaatgaagagggacaca 229  Q
     |||| | ||||||||||||||||||||||||||||||||||||||  | |||| || | ||||||||||||||||||||||||||||||| |||| |||    
T  28132527 atatacacgtcagtttagctaatttagtgggttgaaagtcaacttggcaacttgcaaatacattgtatttatatgagaaatcagaatgaagggggataca 28132626  T
Q  230 gttttgaccctcatttctcttagtctctctgagtttaaacatccctcatttcttagtttctttgagt 296  Q
     ||||||||||||||  ||||||||||||||||||| || ||||||||||||||||| ||| |||||    
T  28132627 attttgaccctcatt--tcttagtctctctgagttt-aatatccctcatttcttagtctctctgagt 28132690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 30 - 282
Target Start/End: Complemental strand, 42756469 - 42756212
Alignment:
Q  30 tgtcaatagaaataatggcaaatcaaattttataagattgtacatttatttgtaaatagttaaataatcattctatcaattagcataattagcagtaaat 129  Q
    ||||||| ||| ||||||||||||||||| |||||||||| |||||||||||||| |||| |||||||||| || |||||||||||||||||| ||||||    
T  42756469 tgtcaatggaattaatggcaaatcaaattctataagattgcacatttatttgtaa-tagtcaaataatcatcctttcaattagcataattagctgtaaat 42756371  T
Q  130 gtatatatgtcagtttagctaatttagtgggttgaaagtcaacttgaaagcttgtaattgcattgtatttatatgagaaatcagaatgaagagggacaca 229  Q
     |||| |||||||||| |||||||||||||||||||||||||||||| | ||||||| | ||||||||||||||||||||||||||||||| |||| |||    
T  42756370 atatacatgtcagttttgctaatttagtgggttgaaagtcaacttgacaacttgtaaatacattgtatttatatgagaaatcagaatgaagcgggataca 42756271  T
Q  230 gttt-------tgaccctcatttctcttagtctctctgagtttaaacatccctcatttct 282  Q
    ||||       ||||||||||||||||| |||||| ||||||| || |||||||||||||    
T  42756270 gttttgacttttgaccctcatttctcttggtctctttgagttt-aatatccctcatttct 42756212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 30 - 247
Target Start/End: Original strand, 28162654 - 28162870
Alignment:
Q  30 tgtcaatagaaataatggcaaatcaaattttataagattgtacatttatttgtaaatagttaaataatcattctatcaattagcataattagcagtaaat 129  Q
    ||||||| ||| ||||||||||||||||| |||||||||| |||||||||||||| |||| |||||||||| || |||||||||||||||||  ||||||    
T  28162654 tgtcaatggaattaatggcaaatcaaattctataagattgcacatttatttgtaa-tagtcaaataatcatcctttcaattagcataattagttgtaaat 28162752  T
Q  130 gtatatatgtcagtttagctaatttagtgggttgaaagtcaacttgaaagcttgtaattgcattgtatttatatgagaaatcagaatgaagagggacaca 229  Q
     |||| | ||||||||||||||||||||||||||||||||||||||  | ||||||| | ||||||||||||||||||||||||||||||| |||| |||    
T  28162753 atatacacgtcagtttagctaatttagtgggttgaaagtcaacttggcaacttgtaaatacattgtatttatatgagaaatcagaatgaagggggataca 28162852  T
Q  230 gttttgaccctcatttct 247  Q
    ||||||||||||||||||    
T  28162853 gttttgaccctcatttct 28162870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 84 - 282
Target Start/End: Original strand, 5997781 - 5997978
Alignment:
Q  84 aatagttaaataatcattctatcaattagcataattagcagtaaatgtatatatgtcagtttagctaatttagtgggttgaaagtcaacttgaaagcttg 183  Q
    |||||| |||||||||| || |||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  5997781 aatagtcaaataatcatcctttcaattagcataattagctgtaaatatatacatgtcagtttagctaatttagtgggttgaaagtcaacttgacaacttg 5997880  T
Q  184 taattgcattgtatttatatgagaaatcagaatgaagagggacacagttttgaccctcatttctcttagtctctctgagtttaaacatccctcatttct 282  Q
    ||| | |||||||||||||| |||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  5997881 taaatacattgtatttatataagaaatcagaatgaaggggtatacagttttgaccctcatttctcttagtctctctgagttt-aatatccctcatttct 5997978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 463 - 589
Target Start/End: Original strand, 20330587 - 20330713
Alignment:
Q  463 atccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatcgt 562  Q
    |||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||      
T  20330587 atccttcgtgatcgtgcttgagttcgtcactgatggtgatgaattcgcactggaattgcgaaggaaatggttcaatgatgaagattcagtgttgaatcac 20330686  T
Q  563 cgagaactgtgatgaatttggttgaat 589  Q
     ||||| ||||| ||||||| ||||||    
T  20330687 tgagaattgtgacgaatttgcttgaat 20330713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 324 - 408
Target Start/End: Complemental strand, 16404273 - 16404189
Alignment:
Q  324 ttggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttgcgtgaatccgaaaataaatcgg 408  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16404273 ttggagattttgagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttgcgtgaatccgaaaataaatcgg 16404189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 462 - 589
Target Start/End: Original strand, 20345031 - 20345158
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatcg 561  Q
    ||||| ||||||| |||||||||||||||| |||||||||||| || |||||||||||||||||||| |||||||||||||| ||||||||| ||||||     
T  20345031 gatccttcgtgatcgtgcttgagttcgtcagtgatggtgatgaatttgcactggaattgcgaaggaaatggttcaatgatgaagattcagtgttgaatca 20345130  T
Q  562 tcgagaactgtgatgaatttggttgaat 589  Q
      ||||| ||||| ||||||| ||||||    
T  20345131 ctgagaattgtgacgaatttgcttgaat 20345158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 462 - 549
Target Start/End: Complemental strand, 21479974 - 21479887
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattc 549  Q
    ||||| ||||||| |||||||| |||||| |  |||||||||| ||||||||||||||||||||||  || ||| |||||||||||||    
T  21479974 gatccttcgtgatcgtgcttgaattcgtcgccaatggtgatgaattcgcactggaattgcgaaggatttgattcgatgatgatgattc 21479887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 317 - 408
Target Start/End: Complemental strand, 21480132 - 21480040
Alignment:
Q  317 ttttcggttggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttgc-gtgaatccgaaaataaatcgg 408  Q
    |||||||||||||||||| | ||||||||||||||||||||||||  || ||||| ||| |||||| ||||  | || |||||||||||||||    
T  21480132 ttttcggttggagatttcgaacgaagatcttcggaaacacttgaatctggttctgcttgttgatttcttgctttaaaaccgaaaataaatcgg 21480040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 25893345 - 25893272
Alignment:
Q  229 agttttgaccctcatttctcttagtctctctgagtttaaacatccctcatt--tcttagtttctttgagtctaac 301  Q
    ||||||||||||||||||||||||||||||||||||| || |||| |||||  |||||||||||  |||||||||    
T  25893345 agttttgaccctcatttctcttagtctctctgagttt-aatatccttcattgctcttagtttctccgagtctaac 25893272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 25893401 - 25893347
Alignment:
Q  30 tgtcaatagaaataatggcaaatcaaattttataagattgtacatttatttgtaa 84  Q
    ||||||| ||| ||||||||||||||||| |||||||||| ||||||||||||||    
T  25893401 tgtcaatggaattaatggcaaatcaaattctataagattgcacatttatttgtaa 25893347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 367 - 408
Target Start/End: Original strand, 9187444 - 9187485
Alignment:
Q  367 ttctgtttgatgatttgttgcgtgaatccgaaaataaatcgg 408  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  9187444 ttctgtttgatgatttgttgcgtgaaaccgaaaataaatcgg 9187485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 147; Significance: 3e-77; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 30 - 280
Target Start/End: Original strand, 681 - 929
Alignment:
Q  30 tgtcaatagaaataatggcaaatcaaattttataagattgtacatttatttgtaaatagttaaataatcattctatcaattagcataattagcagtaaat 129  Q
    ||||||| ||| ||||||||||||||||| |||||||||| |||||||||||||| |||| |||||||||| || |||||||||||||||||  ||||||    
T  681 tgtcaatggaattaatggcaaatcaaattctataagattgcacatttatttgtaa-tagtcaaataatcatcctttcaattagcataattagatgtaaat 779  T
Q  130 gtatatatgtcagtttagctaatttagtgggttgaaagtcaacttgaaagcttgtaattgcattgtatttatatgagaaatcagaatgaagagggacaca 229  Q
     |||| | ||||||||||||||||||||||||||||||||||||||| | ||||||| |  |||||||||||||||||||||||||| |||  ||| |||    
T  780 atatacaagtcagtttagctaatttagtgggttgaaagtcaacttgacaacttgtaaatatattgtatttatatgagaaatcagaataaaggaggataca 879  T
Q  230 gttttgaccctcatttctcttagtctctctgagtttaaacatccctcattt 280  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||    
T  880 gttttgaccctcatttctcttagtctctctgagttt-aatatccctcattt 929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 83; Significance: 5e-39; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 462 - 560
Target Start/End: Complemental strand, 97601 - 97503
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatc 560  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  97601 gatccttcgtgatcgtgcttgagttcgtcactgatggtgatgaattcgcactggaattgcgaaggaaatggttcaatgatgatgattcagtgatgaatc 97503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 462 - 560
Target Start/End: Complemental strand, 178514 - 178416
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatc 560  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  178514 gatccttcgtgatcgtgcttgagttcgtcactgatggtgatgaattcgcactggaattgcgaaggaaatggttcaatgatgatgattcagtgatgaatc 178416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 339 - 408
Target Start/End: Complemental strand, 60032 - 59963
Alignment:
Q  339 gaagatcttcggaaacacttgaacttgattctgtttgatgatttgttgcgtgaatccgaaaataaatcgg 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  60032 gaagatcttcggaaacacttgaacttgattctgtttgatgatttgttgcatgaatccgaaaataaatcgg 59963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 8e-38; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 324 - 408
Target Start/End: Complemental strand, 18084464 - 18084380
Alignment:
Q  324 ttggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttgcgtgaatccgaaaataaatcgg 408  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18084464 ttggagatttcgagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttgcgtgaatccgaaaataaatcgg 18084380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 462 - 560
Target Start/End: Complemental strand, 27686437 - 27686339
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatc 560  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  27686437 gatccttcgtgatcgtgcttgagttcgtcactgatggtgatgaattcgcactggaattgcgaagggaatggttcaatgatgatgattcagtgatgaatc 27686339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 324 - 408
Target Start/End: Complemental strand, 17258892 - 17258808
Alignment:
Q  324 ttggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttgcgtgaatccgaaaataaatcgg 408  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17258892 ttggagattttgagcgaagatcttcggaaacacttgaacttgattctatttgatgatttgttgcgtgaatccgaaaataaatcgg 17258808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 462 - 549
Target Start/End: Complemental strand, 13063514 - 13063427
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattc 549  Q
    ||||| ||||||| |||||||| |||||| |  |||||||||| ||||||||||||||||||||||  || ||| |||||||||||||    
T  13063514 gatccttcgtgatcgtgcttgaattcgtcgccaatggtgatgaattcgcactggaattgcgaaggatttgattcgatgatgatgattc 13063427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 317 - 408
Target Start/End: Complemental strand, 20830138 - 20830046
Alignment:
Q  317 ttttcggttggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttgc-gtgaatccgaaaataaatcgg 408  Q
    |||||||||||||||||| | ||||||||||||||||||||||||  || ||||| ||| |||||| ||||  | || |||||||||||||||    
T  20830138 ttttcggttggagatttcgaacgaagatcttcggaaacacttgaatctggttctgcttgttgatttcttgctttaaaaccgaaaataaatcgg 20830046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 462 - 549
Target Start/End: Complemental strand, 20846884 - 20846797
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattc 549  Q
    ||||| ||||||| |||||||| |||||| |  |||||||||| ||||||||||||||||||||||  || ||| ||||||| |||||    
T  20846884 gatccttcgtgatcgtgcttgaattcgtcgccaatggtgatgaattcgcactggaattgcgaaggatttgattcgatgatgangattc 20846797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 317 - 408
Target Start/End: Complemental strand, 20847042 - 20846950
Alignment:
Q  317 ttttcggttggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttgc-gtgaatccgaaaataaatcgg 408  Q
    |||||||||||||||||| | ||||||||||||||||||||||||  || ||||| ||| |||||| ||||  | || |||||||||||||||    
T  20847042 ttttcggttggagatttcgaacgaagatcttcggaaacacttgaatctggttctgcttgttgatttcttgctttaaaaccgaaaataaatcgg 20846950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 508 - 580
Target Start/End: Original strand, 15715191 - 15715263
Alignment:
Q  508 cgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatcgtcgagaactgtgatgaatt 580  Q
    ||||||||||||| ||||||   |||||||||||||||||||  |||||||||   |||||||||||||||||    
T  15715191 cgcactggaattgtgaaggattcggttcaatgatgatgattctttgatgaatcactgagaactgtgatgaatt 15715263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 468 - 589
Target Start/End: Original strand, 21694602 - 21694723
Alignment:
Q  468 tcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatcgtcgaga 567  Q
    ||||||| |||||||||| ||||||  |  ||||||  |||||||| | |||||||||||   | ||||||||||| ||||||||| ||||||   ||||    
T  21694602 tcgtgatcgtgcttgagtccgtcaccaacagtgatggattcgcacttgtattgcgaaggagccgattcaatgatgaagattcagtgttgaatctctgaga 21694701  T
Q  568 actgtgatgaatttggttgaat 589  Q
    | ||||| ||||||| ||||||    
T  21694702 attgtgacgaatttgcttgaat 21694723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 468 - 589
Target Start/End: Original strand, 21709332 - 21709453
Alignment:
Q  468 tcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatcgtcgaga 567  Q
    ||||||| |||||||||| ||||||  |  ||||||  |||||||| | |||||||||||   | ||||||||||| ||||||||| ||||||   ||||    
T  21709332 tcgtgatcgtgcttgagtccgtcaccaacagtgatggattcgcacttgtattgcgaaggagccgattcaatgatgaagattcagtgttgaatctctgaga 21709431  T
Q  568 actgtgatgaatttggttgaat 589  Q
    | ||||| ||||||| ||||||    
T  21709432 attgtgacgaatttgcttgaat 21709453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 495 - 591
Target Start/End: Original strand, 29441313 - 29441408
Alignment:
Q  495 atggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatcgtcgagaactgtgatgaatttggttgaatct 591  Q
    |||||||||| |||||||| |||||||  || ||  |||||||||||||||||||   ||||||||   |||||| ||||||||||| |||||||||    
T  29441313 atggtgatgaattcgcacttgaattgcagagaaaccggttcaatgatgatgattcttcgatgaatcactgagaaccgtgatgaattt-gttgaatct 29441408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 549
Target Start/End: Original strand, 26622013 - 26622100
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattc 549  Q
    ||||| ||||||| ||| |||| |||||| |  | |||||||| ||||||||||||||||||||| | || ||| ||||||| |||||    
T  26622013 gatccttcgtgatcgtgtttgaattcgtcgccaacggtgatgaattcgcactggaattgcgaagggattgattcgatgatgaagattc 26622100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 468 - 589
Target Start/End: Complemental strand, 17258743 - 17258622
Alignment:
Q  468 tcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtgg-ttcaatgatgatgattcagtgatgaatcgtcgag 566  Q
    ||||||| |||||||||| ||||||  |  ||||||  |||||||| | ||||||||| |||| | ||||||||||| ||||||||| ||||||   |||    
T  17258743 tcgtgatcgtgcttgagtccgtcaccaacagtgatggattcgcacttgtattgcgaag-aagtcgattcaatgatgaagattcagtgttgaatctctgag 17258645  T
Q  567 aactgtgatgaatttggttgaat 589  Q
    || ||||| ||||||| ||||||    
T  17258644 aattgtgacgaatttgattgaat 17258622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 519
Target Start/End: Complemental strand, 20829980 - 20829923
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaatt 519  Q
    ||||| ||||||| |||||||| |||||| |  |||||||||| ||||||||||||||    
T  20829980 gatccttcgtgatcgtgcttgaattcgtcgccaatggtgatgaattcgcactggaatt 20829923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 468 - 560
Target Start/End: Complemental strand, 19800074 - 19799982
Alignment:
Q  468 tcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatc 560  Q
    ||||||| |||||||||| ||||||  | |||||||  |||||||| | |||| |||| |  || ||||||||||| ||||||||| ||||||    
T  19800074 tcgtgatcgtgcttgagtccgtcaccaacggtgatggattcgcacttgtattgtgaagaagttgattcaatgatgaagattcagtgttgaatc 19799982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 462 - 572
Target Start/End: Complemental strand, 19171 - 19061
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatcg 561  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||  ||||||||||||| ||||||||||||||||     
T  19171 gatccttcgtgatcgtgcttgagttcgtcactgatggtgatgaattcgcactggaattgtgaaggaaacggttcaatgatgacgattcagtgatgaatca 19072  T
Q  562 tcgagaactgt 572  Q
    | |||||||||    
T  19071 ttgagaactgt 19061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 72; Significance: 2e-32; HSPs: 3)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 462 - 589
Target Start/End: Original strand, 7354 - 7481
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatcg 561  Q
    ||||| ||||||| |||||||||||||||| |||||||||||| || |||||||||||||||||||| |||||||||||||| ||||||||| ||||||     
T  7354 gatccttcgtgatcgtgcttgagttcgtcagtgatggtgatgaatttgcactggaattgcgaaggaaatggttcaatgatgaagattcagtgttgaatca 7453  T
Q  562 tcgagaactgtgatgaatttggttgaat 589  Q
      ||||| ||||| ||||||| ||||||    
T  7454 ctgagaattgtgacgaatttgcttgaat 7481  T

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Target: scaffold0260; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 462 - 549
Target Start/End: Original strand, 12908 - 12994
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattc 549  Q
    ||||| ||||||| |||||||| |||||| |  |||| ||||| ||||||||||||||||||||||| || ||| ||||||| |||||    
T  12908 gatccttcgtgatcgtgcttgaattcgtcgcc-atggggatgaattcgcactggaattgcgaaggaattgattcgatgatgaagattc 12994  T

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Target: scaffold0260; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 338 - 408
Target Start/End: Original strand, 12771 - 12843
Alignment:
Q  338 cgaagatcttcggaaacacttgaacttga-ttctgtttgatgatttgttgc-gtgaatccgaaaataaatcgg 408  Q
    |||||||||||||||||||||||| |||| || |||||| |||||| | ||  |||| |||||||||||||||    
T  12771 cgaagatcttcggaaacacttgaatttgatttttgtttgttgatttctggctttgaaaccgaaaataaatcgg 12843  T

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Target: scaffold0170 (Bit Score: 71; Significance: 7e-32; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 462 - 560
Target Start/End: Complemental strand, 301 - 203
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatc 560  Q
    ||||| ||||||| |||||||||||||||| |||||||||||  ||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  301 gatccttcgtgatcgtgcttgagttcgtcattgatggtgatggattcgcactggaattgcgaagggaatggttcaatgatgatgattcagtgatgaatc 203  T

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Target: scaffold0055 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 339 - 408
Target Start/End: Original strand, 8798 - 8867
Alignment:
Q  339 gaagatcttcggaaacacttgaacttgattctgtttgatgatttgttgcgtgaatccgaaaataaatcgg 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8798 gaagatcttcggaaacacttgaacttgattctgtttgatgatttgttgcatgaatccgaaaataaatcgg 8867  T

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Target: scaffold0052 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 339 - 408
Target Start/End: Complemental strand, 75737 - 75668
Alignment:
Q  339 gaagatcttcggaaacacttgaacttgattctgtttgatgatttgttgcgtgaatccgaaaataaatcgg 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  75737 gaagatcttcggaaacacttgaacttgattctgtttgatgatttgttgcatgaatccgaaaataaatcgg 75668  T

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Target: scaffold0143 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 324 - 408
Target Start/End: Complemental strand, 21470 - 21386
Alignment:
Q  324 ttggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgatttgttgcgtgaatccgaaaataaatcgg 408  Q
    ||||||||||  ||||||||||||||||||||||||||||||||| |||||| |||||| |  | ||||||||||||||||||||    
T  21470 ttggagattttgagcgaagatcttcggaaacacttgaacttgattttgtttgttgatttttgacttgaatccgaaaataaatcgg 21386  T

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Target: scaffold0240 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 324 - 382
Target Start/End: Original strand, 22049 - 22107
Alignment:
Q  324 ttggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgattt 382  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||    
T  22049 ttggagattttgagcgaagatcttcggaaacacttgaacttgattctgtttgttgattt 22107  T

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Target: scaffold0186 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 462 - 594
Target Start/End: Original strand, 15096 - 15228
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaaggaagtggttcaatgatgatgattcagtgatgaatcg 561  Q
    ||||| ||||||| |||||||  |||||  || | ||||| || | ||||||||||||| ||||||   ||||| |||||||||||||  |||||||||     
T  15096 gatccttcgtgatcgtgcttggattcgttgctaacggtgacgaatccgcactggaattgtgaaggattcggttcgatgatgatgattctttgatgaatca 15195  T
Q  562 tcgagaactgtgatgaatttggttgaatctgtg 594  Q
      |||||| ||||||||||||||||||||||||    
T  15196 ctgagaaccgtgatgaatttggttgaatctgtg 15228  T

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Target: scaffold0049 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 324 - 382
Target Start/End: Complemental strand, 36582 - 36524
Alignment:
Q  324 ttggagatttcaagcgaagatcttcggaaacacttgaacttgattctgtttgatgattt 382  Q
    ||||||||||  ||||||||||| |||||||||||||||||||||||||||| ||||||    
T  36582 ttggagattttgagcgaagatctccggaaacacttgaacttgattctgtttgttgattt 36524  T

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Target: scaffold1658 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold1658
Description:

Target: scaffold1658; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 462 - 527
Target Start/End: Complemental strand, 837 - 772
Alignment:
Q  462 gatccctcgtgattgtgcttgagttcgtcactgatggtgatgatttcgcactggaattgcgaagga 527  Q
    ||||| ||||||| |||||||| ||||||||  |||||||||| |||| |||||||||||||||||    
T  837 gatccttcgtgatcgtgcttgaattcgtcaccaatggtgatgaattcgtactggaattgcgaagga 772  T

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