View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20869_low_39 (Length: 404)
Name: NF20869_low_39
Description: NF20869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20869_low_39 |
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Alignment Details
Target: chr7 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 45 - 378
Target Start/End: Complemental strand, 6973302 - 6972973
Alignment:
| Q |
45 |
atgatcaatctctaactaggattgatttcaactggatttgggcaagttctacactgtttgtttattctctcccccttcattttacaaaacctgatgaatt |
144 |
Q |
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| T |
6973302 |
atgatcaatctctaactaggattgatttcaactggatttgggcaagttctacactgtttgtttattctctcccccttcattttacaaaacctgatgaatt |
6973203 |
T |
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| Q |
145 |
atccatatttcaaaatctaaacatgtgaaacagattttttctgttacgtctacacgttttaaaattcgaacaaatcataggattttgataaacgcaaggg |
244 |
Q |
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| T |
6973202 |
atccatatttcaaaatccaaacatgtgaaacagattttttctgttacgtctacacgttttaaaattcgaacaaatcataggattttgataaacgcaaggg |
6973103 |
T |
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| Q |
245 |
acgagaagatattaccatctgtacttacatggtctatttctaactaattgtagctttagctacacatgttaagtgttaaaaatcttggtgaagtgtggcg |
344 |
Q |
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| T |
6973102 |
acgagaagatattaccatcagtactttcatggtctatttctaactaattgtagctttagctacacattttaagtgttaaaaatcttggtgaagtggggcg |
6973003 |
T |
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| Q |
345 |
tagcgtacgtagcgtatatttgatctactaaaaa |
378 |
Q |
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| T |
6973002 |
ca----acatagtgtgtatttgatctactaaaaa |
6972973 |
T |
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