View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20869_low_46 (Length: 377)
Name: NF20869_low_46
Description: NF20869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20869_low_46 |
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Alignment Details
Target: chr7 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 8 - 357
Target Start/End: Complemental strand, 37812503 - 37812153
Alignment:
| Q |
8 |
attatactaaaaatgatatctaggtacaattatgataactatactcattacatcatcccnnnnnnn-cttgatagacttctatataaatgatataaaaag |
106 |
Q |
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| T |
37812503 |
attacactaaaaatgatatctaggtacaattatgataactatactcattacatcatcccaaaaaaaacttgatagacttctatataaatgatataaaaag |
37812404 |
T |
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| Q |
107 |
caatcatttttcaatattgaacatgtacaacgattaatttgttggtcatttacttctatttattattaaggttagatatatttttatcccttataaaata |
206 |
Q |
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| T |
37812403 |
caatcatttttcaatattgaacatgtacaacgattaatttgttggtcatttacttctatttattattaaggttagatatatttttatcccttataaaata |
37812304 |
T |
|
| Q |
207 |
acggtttttaaagttttaggctctnnnnnnnnnttatttcggagtactgaacnnnnnnnnnaatttaaaaatgagggtttttagttgctataggtactaa |
306 |
Q |
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| T |
37812303 |
acggtttttaaagttttaggctctaaaaaaaaattatttcggagtactgaactttttttttaatttaaaaatgagggtttttagttgctataggtactaa |
37812204 |
T |
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| Q |
307 |
aataatattagtccatataaaataaaatagcgactaaaattgacaaacccc |
357 |
Q |
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| T |
37812203 |
aataatattagtccatataaaataaaatagcgactaaaattgacaaacccc |
37812153 |
T |
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