View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20869_low_53 (Length: 355)

Name: NF20869_low_53
Description: NF20869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20869_low_53
NF20869_low_53
[»] chr4 (19 HSPs)
chr4 (4-344)||(48875880-48876220)
chr4 (17-344)||(48870589-48870916)
chr4 (17-344)||(48886275-48886602)
chr4 (141-253)||(48705169-48705281)
chr4 (287-329)||(7878045-7878087)
chr4 (276-335)||(45365934-45365993)
chr4 (41-87)||(48735352-48735398)
chr4 (155-248)||(48735194-48735287)
chr4 (292-335)||(7237457-7237500)
chr4 (287-330)||(37826709-37826752)
chr4 (289-335)||(7771696-7771742)
chr4 (289-335)||(7790381-7790427)
chr4 (150-232)||(45371876-45371958)
chr4 (285-335)||(45384612-45384662)
chr4 (285-319)||(50669382-50669416)
chr4 (287-324)||(7786763-7786800)
chr4 (268-321)||(43596153-43596206)
chr4 (34-87)||(48705329-48705382)
chr4 (290-326)||(48156152-48156188)
[»] chr8 (5 HSPs)
chr8 (287-335)||(4962233-4962281)
chr8 (287-323)||(12195623-12195659)
chr8 (287-323)||(12200641-12200677)
chr8 (287-323)||(12440051-12440087)
chr8 (287-323)||(12445069-12445105)
[»] chr5 (2 HSPs)
chr5 (292-333)||(9120067-9120108)
chr5 (294-335)||(179364-179405)
[»] chr3 (5 HSPs)
chr3 (285-330)||(11024216-11024261)
chr3 (285-331)||(11015203-11015249)
chr3 (285-330)||(11005641-11005686)
chr3 (46-90)||(11005890-11005934)
chr3 (285-333)||(47451616-47451664)
[»] chr6 (1 HSPs)
chr6 (150-214)||(21015998-21016062)


Alignment Details
Target: chr4 (Bit Score: 293; Significance: 1e-164; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 4 - 344
Target Start/End: Original strand, 48875880 - 48876220
Alignment:
Q  4 tggtgggtatattattctccccttatatggcatcacgctttgagtttttctcattgagagccaatacctggatacaaattgagtgtcctcactccccttt 103  Q
    |||||| | ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48875880 tggtggttttatcattctccccttatatggcatcacgcttcgagtttttctcattgagagccaatacctggatacaaattgagtgtcctcactccccttt 48875979  T
Q  104 tagtaatgcctttgatgagaagtgcggtgtaggttccctctatcacggggctattcattggttggcttatggtgatgatttacaaaagagtgttatcctt 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  48875980 tagtaatgcctttgatgagaagtgcggtgtaggttccctctatcacggggctattcattggttggcttatcgtgatgatttacaaaagaatgttatcctt 48876079  T
Q  204 gcctttgatttaacggaaaggcaactttttgatatgcatttgccagatgattattataattataactatgatcctcacaactgtggtttgtgggtatttg 303  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  48876080 gcctttgatttcactgaaaggcaactttttgatatgcatttgccagatgattattacaattataactatgatcctaacaactgtggtttgtgggtatttg 48876179  T
Q  304 gggaatttctcagtctatgggctatggattataatgataat 344  Q
    ||||||||||||||||||  |||||||||||||||||||||    
T  48876180 gggaatttctcagtctatatgctatggattataatgataat 48876220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 17 - 344
Target Start/End: Original strand, 48870589 - 48870916
Alignment:
Q  17 attctccccttatatggcatcacgctttgagtttttctcattgagagccaatacctggatacaaattgagtgtcctcactccccttttagtaatgccttt 116  Q
    ||||| |||||||||  |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| || ||  |||||||   |||| | ||    
T  48870589 attcttcccttatatttcatcacacttcgagtttttctcattgagagccaatacctggatacaaattgagtgtactgacagcccttttgcgaatggcatt 48870688  T
Q  117 gatgagaagtgcggtgtaggttccctctatcacggggctattcattggttggcttatggtgatgatttacaaaagagtgttatccttgcctttgatttaa 216  Q
    ||||| |||  | | ||||||||||||||| | |||||||||||||||||||||||| ||| || ||||  ||||| |||||||||||||||||||||||    
T  48870689 gatgataagcccagcgtaggttccctctataatggggctattcattggttggcttatcgtgctggtttaggaaagaatgttatccttgcctttgatttaa 48870788  T
Q  217 cggaaaggcaactttttgatatgcatttgccagatgattattataattataactatgatcctcacaactgtggtttgtgggtatttggggaatttctcag 316  Q
    |||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  48870789 cggaaaggcaactttttgatatgcttttaccagatgattattacaattataactatgatcctaacaactgtggtttgtgggtatttggggaatttctcag 48870888  T
Q  317 tctatgggctatggattataatgataat 344  Q
    |||||  |||||||||||||||||||||    
T  48870889 tctatatgctatggattataatgataat 48870916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 17 - 344
Target Start/End: Original strand, 48886275 - 48886602
Alignment:
Q  17 attctccccttatatggcatcacgctttgagtttttctcattgagagccaatacctggatacaaattgagtgtcctcactccccttttagtaatgccttt 116  Q
    ||||| |||||||||  |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| || ||  |||||||   |||| | ||    
T  48886275 attcttcccttatatttcatcacacttcgagtttttctcattgagagccaatacctggatacaaattgagtgtactgacagcccttttgcgaatggcatt 48886374  T
Q  117 gatgagaagtgcggtgtaggttccctctatcacggggctattcattggttggcttatggtgatgatttacaaaagagtgttatccttgcctttgatttaa 216  Q
    ||||| |||  | | ||||||||||||||| | |||||||||||||||||||||||| ||| || ||||  ||||| |||||||||||||||||||||||    
T  48886375 gatgataagcccagcgtaggttccctctataatggggctattcattggttggcttatcgtgctggtttaggaaagaatgttatccttgcctttgatttaa 48886474  T
Q  217 cggaaaggcaactttttgatatgcatttgccagatgattattataattataactatgatcctcacaactgtggtttgtgggtatttggggaatttctcag 316  Q
    |||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  48886475 cggaaaggcaactttttgatatgcttttaccagatgattattacaattataactatgatcctaacaactgtggtttgtgggtatttggggaatttctcag 48886574  T
Q  317 tctatgggctatggattataatgataat 344  Q
    |||||  |||||||||||||||||||||    
T  48886575 tctatatgctatggattataatgataat 48886602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 141 - 253
Target Start/End: Complemental strand, 48705281 - 48705169
Alignment:
Q  141 ctctatcacggggctattcattggttggcttatggtgatgatttacaaaagagtgttatccttgcctttgatttaacggaaaggcaactttttgatatgc 240  Q
    |||||| | |||||||||||||||||||||||| || ||||||||| ||||  ||||||  ||||||||||||||| ||||||| |||||||||||||||    
T  48705281 ctctataatggggctattcattggttggcttatcgtcatgatttacgaaaggatgttattgttgcctttgatttaatggaaagggaactttttgatatgc 48705182  T
Q  241 atttgccagatga 253  Q
     ||||||||||||    
T  48705181 ttttgccagatga 48705169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 287 - 329
Target Start/End: Original strand, 7878045 - 7878087
Alignment:
Q  287 tggtttgtgggtatttggggaatttctcagtctatgggctatg 329  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  7878045 tggtttgtgggtatttggagaatttctcagtctatgggctatg 7878087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 335
Target Start/End: Complemental strand, 45365993 - 45365934
Alignment:
Q  276 cctcacaactgtggtttgtgggtatttggggaatttctcagtctatgggctatggattat 335  Q
    |||||| | |||||||||||||||||||| |||||| ||||| | |||||||||||||||    
T  45365993 cctcacgattgtggtttgtgggtatttggagaatttttcagtttttgggctatggattat 45365934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 48735398 - 48735352
Alignment:
Q  41 ctttgagtttttctcattgagagccaatacctggatacaaattgagt 87  Q
    |||||||||||||||||||||||| |||||||||| | |||||||||    
T  48735398 ctttgagtttttctcattgagagctaatacctggaaagaaattgagt 48735352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 248
Target Start/End: Complemental strand, 48735287 - 48735194
Alignment:
Q  155 tattcattggttggcttatggtgatgatttacaaaagagtgttatccttgcctttgatttaacggaaaggcaactttttgatatgcatttgcca 248  Q
    |||||||||||||||||||  | |||||||||  ||| |||||||   || ||||||||||| | ||||| |||||||| ||||| ||||||||    
T  48735287 tattcattggttggcttatcatcatgatttacgtaagggtgttattgctgtctttgatttaatgtaaaggaaacttttttatatggatttgcca 48735194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 292 - 335
Target Start/End: Complemental strand, 7237500 - 7237457
Alignment:
Q  292 tgtgggtatttggggaatttctcagtctatgggctatggattat 335  Q
    ||||||||||||| |||||||||||||||||||||  |||||||    
T  7237500 tgtgggtatttggagaatttctcagtctatgggctcaggattat 7237457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 37826752 - 37826709
Alignment:
Q  287 tggtttgtgggtatttggggaatttctcagtctatgggctatgg 330  Q
    |||||||||||||||||| |||||||| ||||||||||| ||||    
T  37826752 tggtttgtgggtatttggagaatttcttagtctatgggccatgg 37826709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 335
Target Start/End: Original strand, 7771696 - 7771742
Alignment:
Q  289 gtttgtgggtatttggggaatttctcagtctatgggctatggattat 335  Q
    |||||||||||||||| |||||||||||| |||| |||| |||||||    
T  7771696 gtttgtgggtatttggagaatttctcagtttatgcgctaaggattat 7771742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 335
Target Start/End: Original strand, 7790381 - 7790427
Alignment:
Q  289 gtttgtgggtatttggggaatttctcagtctatgggctatggattat 335  Q
    |||||||||||||||| |||||||||||| |||| |||| |||||||    
T  7790381 gtttgtgggtatttggagaatttctcagtttatgcgctaaggattat 7790427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 232
Target Start/End: Complemental strand, 45371958 - 45371876
Alignment:
Q  150 ggggctattcattggttggcttatggtgatgatttacaaaagagtgttatccttgcctttgatttaacggaaaggcaactttt 232  Q
    ||||||||| |||||||| ||| | || ||||||||   | ||||||||| |||||||||||||||| |||| || |||||||    
T  45371958 ggggctatttattggttgtcttttcgtcatgatttatcgatgagtgttattcttgcctttgatttaatggaacggaaactttt 45371876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 335
Target Start/End: Complemental strand, 45384662 - 45384612
Alignment:
Q  285 tgtggtttgtgggtatttggggaatttctcagtctatgggctatggattat 335  Q
    |||||||||||||||||||| |||||||||||| | || |||||| |||||    
T  45384662 tgtggtttgtgggtatttggagaatttctcagtttttgagctatgcattat 45384612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 319
Target Start/End: Original strand, 50669382 - 50669416
Alignment:
Q  285 tgtggtttgtgggtatttggggaatttctcagtct 319  Q
    |||||||||||||||||||| ||||||||||||||    
T  50669382 tgtggtttgtgggtatttggagaatttctcagtct 50669416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 324
Target Start/End: Original strand, 7786763 - 7786800
Alignment:
Q  287 tggtttgtgggtatttggggaatttctcagtctatggg 324  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  7786763 tggtttgtgggtatctggggaatttctcagtatatggg 7786800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 321
Target Start/End: Complemental strand, 43596206 - 43596153
Alignment:
Q  268 actatgatcctcacaactgtggtttgtgggtatttggggaatttctcagtctat 321  Q
    ||||||||||| | || |||| | |||||||||||||||||||||| |||||||    
T  43596206 actatgatcctaaaaattgtgatatgtgggtatttggggaatttcttagtctat 43596153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 48705382 - 48705329
Alignment:
Q  34 catcacgctttgagtttttctcattgagagccaatacctggatacaaattgagt 87  Q
    |||||| |||||||||||||||||||||||  ||||| |||| | |||||||||    
T  48705382 catcacactttgagtttttctcattgagagttaatacatggaaagaaattgagt 48705329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 326
Target Start/End: Complemental strand, 48156188 - 48156152
Alignment:
Q  290 tttgtgggtatttggggaatttctcagtctatgggct 326  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  48156188 tttgtgggtatttggagaatttctcagtttatgggct 48156152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000008; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 287 - 335
Target Start/End: Complemental strand, 4962281 - 4962233
Alignment:
Q  287 tggtttgtgggtatttggggaatttctcagtctatgggctatggattat 335  Q
    |||||||||||||||||| |||||||||||||||||||  |||||||||    
T  4962281 tggtttgtgggtatttggagaatttctcagtctatggggcatggattat 4962233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 12195623 - 12195659
Alignment:
Q  287 tggtttgtgggtatttggggaatttctcagtctatgg 323  Q
    ||||||||||||||||||  |||||||||||||||||    
T  12195623 tggtttgtgggtatttggaaaatttctcagtctatgg 12195659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 12200641 - 12200677
Alignment:
Q  287 tggtttgtgggtatttggggaatttctcagtctatgg 323  Q
    |||||||||||||||||| |||||||| |||||||||    
T  12200641 tggtttgtgggtatttggagaatttcttagtctatgg 12200677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 12440051 - 12440087
Alignment:
Q  287 tggtttgtgggtatttggggaatttctcagtctatgg 323  Q
    ||||||||||||||||||  |||||||||||||||||    
T  12440051 tggtttgtgggtatttggaaaatttctcagtctatgg 12440087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 12445069 - 12445105
Alignment:
Q  287 tggtttgtgggtatttggggaatttctcagtctatgg 323  Q
    |||||||||||||||||| |||||||| |||||||||    
T  12445069 tggtttgtgggtatttggagaatttcttagtctatgg 12445105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 333
Target Start/End: Original strand, 9120067 - 9120108
Alignment:
Q  292 tgtgggtatttggggaatttctcagtctatgggctatggatt 333  Q
    ||||||||||||| |||||||||||| |||||||||||||||    
T  9120067 tgtgggtatttggagaatttctcagtatatgggctatggatt 9120108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 335
Target Start/End: Original strand, 179364 - 179405
Alignment:
Q  294 tgggtatttggggaatttctcagtctatgggctatggattat 335  Q
    |||||||||||  ||||||||||| |||||||||||||||||    
T  179364 tgggtatttggacaatttctcagtatatgggctatggattat 179405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000005; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 11024261 - 11024216
Alignment:
Q  285 tgtggtttgtgggtatttggggaatttctcagtctatgggctatgg 330  Q
    |||| ||||||| ||||||| |||||||||||||||||||||||||    
T  11024261 tgtgatttgtggatatttggagaatttctcagtctatgggctatgg 11024216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 331
Target Start/End: Complemental strand, 11015249 - 11015203
Alignment:
Q  285 tgtggtttgtgggtatttggggaatttctcagtctatgggctatgga 331  Q
    |||| ||||||| ||||||| |||||||| |||||||||||||||||    
T  11015249 tgtgatttgtggatatttggagaatttctaagtctatgggctatgga 11015203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 11005686 - 11005641
Alignment:
Q  285 tgtggtttgtgggtatttggggaatttctcagtctatgggctatgg 330  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||    
T  11005686 tgtgatttgtggatatttggagaatttcttagtctatgggctatgg 11005641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 11005934 - 11005890
Alignment:
Q  46 agtttttctcattgagagccaatacctggatacaaattgagtgtc 90  Q
    ||||||||||||||||||| ||||| |||| | ||||||||||||    
T  11005934 agtttttctcattgagagcgaatacatggaaagaaattgagtgtc 11005890  T

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Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 333
Target Start/End: Complemental strand, 47451664 - 47451616
Alignment:
Q  285 tgtggtttgtgggtatttggggaatttctcagtctatgggctatggatt 333  Q
    |||||||||||||||||||| |||||||| |||||| ||| | ||||||    
T  47451664 tgtggtttgtgggtatttggagaatttcttagtctaagggttctggatt 47451616  T

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Target: chr6 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 21015998 - 21016062
Alignment:
Q  150 ggggctattcattggttggcttatggtgatgatttacaaaagagtgttatccttgcctttgattt 214  Q
    |||||||||||||||||||||| | || ||||||||  || ||  |||||| |||||||||||||    
T  21015998 ggggctattcattggttggcttttcgtcatgatttatcaatgaaagttatcattgcctttgattt 21016062  T

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