View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20869_low_63 (Length: 329)
Name: NF20869_low_63
Description: NF20869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20869_low_63 |
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Alignment Details
Target: chr8 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 1 - 311
Target Start/End: Original strand, 3957824 - 3958134
Alignment:
| Q |
1 |
gatacatcattcctcaacctccatattgcccacaaaacaacatgtcaaatcaccaacaacctcatcttccctattcgattcgtacaccaaatgaaacaaa |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3957824 |
gatacatcattcctcaacctccatattgcccacaaaacaacatgtcagatcaccaacaacctcatcttccctattcgattcgtacaccaaatgaaacaaa |
3957923 |
T |
|
| Q |
101 |
cgaatgaaagaacatagatagattcccaaaataatagtaacaagctcagaccacctgaacatctcatatcaaatagatgttgagaacattctaaaatcaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3957924 |
cgaatgaaagaacatagatagattcccaaaataatagtaacaagctcagaccacctgaacatctcatatcaaatagatgttgagaacattctaaaatcaa |
3958023 |
T |
|
| Q |
201 |
ataaatgatgtacatgttcgtcatcctagtcactgtcataaaaaagcccgcagtgaagagtcatccactaaaatcacacctctactcgagcggttcagcc |
300 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |
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| T |
3958024 |
ataaatgatgtacatattcgtcatcctagtcactgtcataaaaaagcccgcagtgaagagttatccactaaaatcacacctctactcgagaggttcagcc |
3958123 |
T |
|
| Q |
301 |
tagttagttgg |
311 |
Q |
| |
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||||||||||| |
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|
| T |
3958124 |
tagttagttgg |
3958134 |
T |
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