View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20869_low_65 (Length: 318)
Name: NF20869_low_65
Description: NF20869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20869_low_65 |
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Alignment Details
Target: chr7 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 19 - 309
Target Start/End: Original strand, 45952327 - 45952618
Alignment:
| Q |
19 |
cacatttctcacattatgtttgaagacaa-ttattcttctttttgctgaagctagcatcacccgtatgagttaaatcatccacattatacaatactttta |
117 |
Q |
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| T |
45952327 |
cacatttctcacattatgtttgaagacaaattattcttctttttgctgaagctagcaccacccgtatgagttaaatcatccacattatacaatactttta |
45952426 |
T |
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| Q |
118 |
taatattaagggatacaactcttccaaagaaaatatcattcttgttcaagtttgaatccgcaatccaatgataacattccaccagcatgataaattgtag |
217 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45952427 |
taatattaagggatacaactcttccaaagaaaatataattcttgtacaagtttgaatccgcaatccaatgataacattccaccagcatgataaattgtag |
45952526 |
T |
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| Q |
218 |
acaaaaacattcattctatgtgaaatagtaaaaactgaaagaagagtaattgataataatcacacactaacaagactcttgccaagaattat |
309 |
Q |
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| T |
45952527 |
acaaaaacattcattctatgtgaaatagtaaaaactgaaagaagattaattgataataatcacacactaacaagactcttgccaagaattat |
45952618 |
T |
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