View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2086_low_16 (Length: 377)
Name: NF2086_low_16
Description: NF2086
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2086_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 18 - 366
Target Start/End: Original strand, 47126530 - 47126882
Alignment:
| Q |
18 |
gtttgatccaaggtctttcgtttttatggagctatcattcttcagtaaattggtacacannnnnnn-atcctttgttagatacatatcttgaagcgcgtc |
116 |
Q |
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| T |
47126530 |
gtttgatccaaggtctttcgtttttatggagctatcattcttcagtaaattggtacacattttttttatcctttgttagatacatatcttgaagcgtgtc |
47126629 |
T |
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| Q |
117 |
atgacatggttataaggatccagttaaactttaccttatattgtgttaaaacatatctctactataaagtaaaattcacgttactacaccaacgacattg |
216 |
Q |
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| T |
47126630 |
atgacatagttataaggatccagttaaactttaccttatattgtgttaaaacatatctctactataaagtaaaattcacgttactacaccaacgacattg |
47126729 |
T |
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| Q |
217 |
aatgatttgagctcaaattctactaatatggtcgtataactttatcaaatgataagaaatattttagaaaaatataatgacatt---tagtattctctaa |
313 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| | |
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| T |
47126730 |
aatgatttgagctcaaattctactaatatggtcgtataactttatcaaatgataagaaatattttagaaaaatttaatgacatttagtagtattctctta |
47126829 |
T |
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| Q |
314 |
aaatttctcgatgtgcatataaagaaaataaaatccttgtgtattgtgttcat |
366 |
Q |
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|||||| |||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
47126830 |
aaatttatcgatgtgcatataaagaaaataaaatcattgtgtattgtgttcat |
47126882 |
T |
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