View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2086_low_17 (Length: 374)
Name: NF2086_low_17
Description: NF2086
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2086_low_17 |
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Alignment Details
Target: chr2 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 10 - 352
Target Start/End: Complemental strand, 2014359 - 2014013
Alignment:
| Q |
10 |
gacatcatcatgtacaacctagtttcaacacaacaagctatgtgaaaaatgtctttcatagacaaagtttaaataatctcatgcatatccaccttgatga |
109 |
Q |
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| T |
2014359 |
gacatcatcatgtacaacctagtttcaacacaacaagctatgtgaaaaatgtctttcatagacaaagtttaaataatctcatccatatccaccttgatga |
2014260 |
T |
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| Q |
110 |
acaagaaatatagttaacatcaaggattattcataggcaaaaaacctttctgcaacaagaagtagcaaatctctatattatttgcctaataatttaaagc |
209 |
Q |
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| T |
2014259 |
acaagaaatatagttaacatcaaggattattcataggca-aaaacctttctgcaacaggaagtagaaaatctctatattatttgcctaataatttaaagc |
2014161 |
T |
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| Q |
210 |
gaaaaattggagaagggaaattattatgtaa-----taaagtgaaactaatgaccgtttacgattgtgttgaacttcatctgataattataaaaaagacg |
304 |
Q |
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| T |
2014160 |
gaaaaattggagaagggaaattattatgtaataaattaaagtgaaactaatgaccgtttacgactgtgttgaacttcatctgataattataaaaaagaca |
2014061 |
T |
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| Q |
305 |
ttgcagaagaaaaacaaaacaaactccctcctactaaaacataaatca |
352 |
Q |
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| T |
2014060 |
ttgcagaagaaaaacaaaataaactccctcctactaaaacataaatca |
2014013 |
T |
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