View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2086_low_6 (Length: 508)
Name: NF2086_low_6
Description: NF2086
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2086_low_6 |
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Alignment Details
Target: chr1 (Bit Score: 467; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 467; E-Value: 0
Query Start/End: Original strand, 16 - 490
Target Start/End: Complemental strand, 26375095 - 26374621
Alignment:
| Q |
16 |
atggtgtcaatcttgatgaagtaaaggtaattgattatcttcagaacatatttatgacttaactgtagtattaccgtagtttttagtaggttcttagaat |
115 |
Q |
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| T |
26375095 |
atggtgtcaatcttgatgaagtaaaggtaattgattatcttcagaacatatttatgacttaactgtagtattaccgtagtttttaataggttcttagaat |
26374996 |
T |
|
| Q |
116 |
tttttaggccaatggacgttacttcaagaagatattaaacaatgatttcatattgggcaaacttaattttgataactaatttggaaacatggtgtactat |
215 |
Q |
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| T |
26374995 |
tttttaggccaatggacgttacttcaagaagatattaaacaatgatttcatattgggcaaacttaattttgataactaatttggaaacatggtgtactat |
26374896 |
T |
|
| Q |
216 |
attcgtatacattttgatctcgatgaggttggtctgctagaagcatgcagaccagcgtgctaggtcctacctttgttgctatgccggttttcgccttcta |
315 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
26374895 |
attcgtatacattttgatctcgatgaggttggtctgctagaagcatgcagaccagcgtgctaggtcctacctttgttgctatgtcggttttcgccttcta |
26374796 |
T |
|
| Q |
316 |
tatttgtggagtttatccgaaaaatctgatacatttttattgaatatcgaataacttattttttgttttaggtacgcaaaccaaatgatgacactgatat |
415 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26374795 |
tatttgtggagtttatccgaaaaatctgatacatttttattgaatatcgaataacttattttttgttttaggtacgcaaaccaaatgatgacactgatat |
26374696 |
T |
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| Q |
416 |
ttacgaggatgggaagctcggcgagaaaaccttaacatctgaaagttctatcacttctaacgtatctgaggaaac |
490 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26374695 |
ttacgaggatgggaagctcggcgagaaaaccttaacatctgaaagttctatcacttctaacgtatctgaggaaac |
26374621 |
T |
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