View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20873_high_14 (Length: 491)

Name: NF20873_high_14
Description: NF20873
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20873_high_14
NF20873_high_14
[»] chr7 (18 HSPs)
chr7 (17-469)||(8457038-8457492)
chr7 (17-437)||(18815278-18815701)
chr7 (67-476)||(27987408-27987822)
chr7 (217-372)||(24819811-24819966)
chr7 (106-361)||(5196636-5196891)
chr7 (223-350)||(40891739-40891866)
chr7 (199-372)||(12121682-12121855)
chr7 (223-347)||(586904-587028)
chr7 (190-275)||(20705542-20705627)
chr7 (190-275)||(20873586-20873671)
chr7 (226-290)||(22865783-22865847)
chr7 (226-290)||(47548969-47549033)
chr7 (226-290)||(47553412-47553476)
chr7 (222-279)||(27869019-27869076)
chr7 (217-368)||(34981961-34982112)
chr7 (217-313)||(36575394-36575490)
chr7 (217-350)||(37075565-37075698)
chr7 (17-72)||(27990204-27990259)
[»] chr1 (9 HSPs)
chr1 (17-476)||(26995878-26996344)
chr1 (17-476)||(24544899-24545365)
chr1 (17-280)||(40392619-40392882)
chr1 (103-353)||(28520809-28521059)
chr1 (217-372)||(10004045-10004200)
chr1 (217-372)||(27030066-27030221)
chr1 (223-350)||(41342783-41342910)
chr1 (226-280)||(37668976-37669030)
chr1 (223-350)||(49369887-49370014)
[»] scaffold0289 (1 HSPs)
scaffold0289 (19-476)||(10981-11446)
[»] chr4 (18 HSPs)
chr4 (32-382)||(24059572-24059924)
chr4 (249-476)||(25135450-25135685)
chr4 (199-353)||(23158122-23158276)
chr4 (199-353)||(36279175-36279329)
chr4 (199-372)||(51872781-51872954)
chr4 (223-296)||(8111038-8111111)
chr4 (223-368)||(17826738-17826883)
chr4 (217-368)||(15649024-15649175)
chr4 (223-350)||(18116357-18116484)
chr4 (223-353)||(29123410-29123541)
chr4 (223-296)||(4303231-4303304)
chr4 (225-297)||(12915913-12915985)
chr4 (226-290)||(36951324-36951388)
chr4 (226-290)||(50693789-50693853)
chr4 (223-278)||(3621622-3621677)
chr4 (223-353)||(22340699-22340829)
chr4 (102-231)||(25135278-25135407)
chr4 (226-290)||(17469159-17469223)
[»] chr2 (9 HSPs)
chr2 (17-207)||(20007412-20007602)
chr2 (199-353)||(30275985-30276139)
chr2 (203-365)||(1258561-1258723)
chr2 (217-353)||(23384957-23385093)
chr2 (222-353)||(32349993-32350124)
chr2 (217-353)||(21963522-21963658)
chr2 (217-353)||(21964707-21964843)
chr2 (223-296)||(38938592-38938665)
chr2 (217-272)||(27914654-27914709)
[»] chr6 (6 HSPs)
chr6 (223-365)||(17228056-17228198)
chr6 (217-372)||(2894351-2894506)
chr6 (222-314)||(7218361-7218453)
chr6 (199-353)||(18295368-18295522)
chr6 (223-368)||(667385-667530)
chr6 (223-278)||(28604934-28604989)
[»] chr3 (14 HSPs)
chr3 (199-371)||(3514780-3514952)
chr3 (223-371)||(48547674-48547822)
chr3 (217-365)||(9819174-9819322)
chr3 (223-353)||(23603382-23603512)
chr3 (223-350)||(23571596-23571723)
chr3 (223-353)||(42462840-42462970)
chr3 (223-296)||(8595377-8595450)
chr3 (226-290)||(16664099-16664163)
chr3 (226-290)||(39632867-39632931)
chr3 (202-290)||(10754162-10754250)
chr3 (226-290)||(52196409-52196473)
chr3 (217-296)||(17153836-17153915)
chr3 (223-350)||(42459278-42459405)
chr3 (217-278)||(53152132-53152193)
[»] chr8 (5 HSPs)
chr8 (223-371)||(26077680-26077828)
chr8 (202-290)||(10801715-10801803)
chr8 (233-371)||(31423195-31423333)
chr8 (227-278)||(26390289-26390340)
chr8 (223-278)||(29532477-29532532)
[»] scaffold0041 (1 HSPs)
scaffold0041 (223-350)||(74418-74545)
[»] scaffold0032 (1 HSPs)
scaffold0032 (223-353)||(58368-58498)
[»] scaffold0003 (1 HSPs)
scaffold0003 (223-314)||(224737-224828)
[»] chr5 (9 HSPs)
chr5 (223-296)||(11266145-11266218)
chr5 (223-296)||(27891818-27891891)
chr5 (226-290)||(29322916-29322980)
chr5 (223-280)||(29150424-29150481)
chr5 (217-353)||(5824941-5825077)
chr5 (222-365)||(31962632-31962775)
chr5 (226-275)||(8896369-8896418)
chr5 (226-275)||(38931892-38931941)
chr5 (217-269)||(6678632-6678684)


Alignment Details
Target: chr7 (Bit Score: 396; Significance: 0; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 17 - 469
Target Start/End: Complemental strand, 8457492 - 8457038
Alignment:
Q  17 accctccaaaagcacaaaaccgattttaatgagtatataagtcaccaagaagaactgtattgatatcaagtcaaagggatattagaagccacaaacgacc 116  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  8457492 accctccaagagcacaaaactgattttaatgagtatataagtcaccaagaagaactgtattgatatcaagtcaatgggatatcagaagccacaaacgacc 8457393  T
Q  117 gtaatgatcacacttaaaaaacaaatggtttctatcctctacacccccacatgaagtcacacaagatatcagtgaaacatccagaacatttctcttccac 216  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  8457392 gtaatgatcacaattaaaaaacaaatggtttttatcctctacacccccacatgaagtcacacaagatatcagtgaaacatccagaacatttctcttccgc 8457293  T
Q  217 agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcct 316  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8457292 agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaaccgctttatgccacgaaaaatgatgaaaatcct 8457193  T
Q  317 cagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcactgtgtatttgttggaagggtaaagttttcac--acacctatcagccatgtc 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  8457192 cagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcacggtgtatttgttggaagggtaaagttttcacacacacctatcagccatgtc 8457093  T
Q  415 aacctacaaacaagaacagacaaccactcactcccccaccaaaacctcctcccac 469  Q
    |||||||||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  8457092 aacctacaaacaagaacaaacaaccgttcactcccccaccaaaacctcctcccac 8457038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 17 - 437
Target Start/End: Complemental strand, 18815701 - 18815278
Alignment:
Q  17 accctccaaaagcacaaaaccgattttaatgagtatataagtcaccaagaagaactgtattgatatcaagtcaaagggatattagaagccacaaacgacc 116  Q
    ||||||||| |||||||||| ||||| ||||||||| ||| |  ||| |||||| |||||||||| |||| ||| ||||||| ||||| || |||||||     
T  18815701 accctccaagagcacaaaactgatttgaatgagtatttaaattgccatgaagaattgtattgataccaagccaatgggatatcagaagtcaaaaacgact 18815602  T
Q  117 gtaatgatcacacttaaaaaacaaatggtttctatcctctacacccccacatgaagtcacacaagatatcagtgaaacatccagaacatttctcttccac 216  Q
    ||| |||||||||||| |||||||||||| | | ||||||||| |||||||||||  | ||||||||| ||| ||||||||||||||||| ||||||| |    
T  18815601 gtagtgatcacacttacaaaacaaatggtctttgtcctctacagccccacatgaaaccgcacaagataccagggaaacatccagaacattcctcttcctc 18815502  T
Q  217 agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcct 316  Q
    |||| |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||| ||| |||||||||||| ||||||||||||||||||    
T  18815501 agattatcctttgtagcaagtctattcagaaagagacgctagacaaatatattaacctttaacggaaccgctttatgccacaaaaaatgatgaaaatcct 18815402  T
Q  317 cagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcactgtgtatttgttggaagggtaaagttttcacac--acctatcagccatgtc 414  Q
    ||||||| |||  |||||||| ||||||||||||||| ||||||||||| ||||||||||||||||| | |||||| |||||  |||||||||||||| |    
T  18815401 cagtaatattagggtcaaccgctgttaagtaagaataagcagattgcacggtgtatttgttggaaggatgaagtttccacaccaacctatcagccatgcc 18815302  T
Q  415 aacctac-aaacaagaacagacaa 437  Q
    ||| | | ||||||||||||||||    
T  18815301 aacttgcaaaacaagaacagacaa 18815278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 67 - 476
Target Start/End: Complemental strand, 27987822 - 27987408
Alignment:
Q  67 agaactgtattgatatcaagtcaaagggatattagaagccacaaacgaccgtaatgatcacacttaaaaaacaaatggtttctatcctctacacccccac 166  Q
    |||||||||| ||||||||| ||| ||||||| ||||||||||||||||  || ||||||||||||||||||||||||| | | | ||||||| ||||||    
T  27987822 agaactgtatcgatatcaagccaatgggatatcagaagccacaaacgac--tagtgatcacacttaaaaaacaaatggtctttgttctctacagccccac 27987725  T
Q  167 atgaagtcacacaagatatcagtgaaacatccagaacatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaat 266  Q
    |||||| | ||||||||| ||||||||||||||||| |||| ||||||  |||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  27987724 atgaagccgcacaagataccagtgaaacatccagaatattt-tcttccgtagattatcctttgtagcaagtctattcagaaagagacgccatacaaaaat 27987626  T
Q  267 attaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcact 366  Q
    |||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||| ||| | ||||||| ||||||||||||||||| ||||||||      
T  27987625 attaacctttaacggaaccgctttatgccacaaaaaatgatgaaaatcctcagtaatattagtatcaaccgctgttaagtaagaatacgtagattgcaag 27987526  T
Q  367 gtgtatttgttggaagggtaaagttttcaca--cacctatcagccatgtcaacctac-aaacaagaacagaca-----accactcactcccccaccaaaa 458  Q
     |||||||||||||| ||| |||||| ||||  ||||||||||||||| |||||| | ||||||||||| |||      |||| ||||||||||||||||    
T  27987525 atgtatttgttggaatggtgaagtttccacacccacctatcagccatgccaacctgcaaaacaagaacatacagtctctccacacactcccccaccaaaa 27987426  T
Q  459 cctcctcccacgcaaata 476  Q
    |||| |||||||||||||    
T  27987425 cctcatcccacgcaaata 27987408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 217 - 372
Target Start/End: Original strand, 24819811 - 24819966
Alignment:
Q  217 agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcct 316  Q
    |||| |||||||||| |||||||||||||||| || ||||| ||||||||||| || ||||| | ||| |||||| ||||  |||| |||| ||||||      
T  24819811 agattatcctttgtagcaagtctattcagaaaaagccgccaaacaaaaatattgacttttaagggaaccgctttaagccataaaaattgatcaaaatctg 24819910  T
Q  317 cagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcactgtgtat 372  Q
    |||| |||||| |||| || | ||||||||||||||| ||||| ||||| ||||||    
T  24819911 cagtgatgttagtgtccactgctgttaagtaagaataagcagaatgcaccgtgtat 24819966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 106 - 361
Target Start/End: Original strand, 5196636 - 5196891
Alignment:
Q  106 cacaaacgaccgtaatgatcacacttaaaaaacaaatggtttctatcctctacacccccacatgaagtcacacaagatatcagtgaaacatccagaacat 205  Q
    |||||||||||||| || || ||||||||||| |||||||  || |||||||   | |||||| | | | ||||||| |   | |||||||| || ||||    
T  5196636 cacaaacgaccgtagtggtcgcacttaaaaaataaatggtccctgtcctctaactcaccacataaggccgcacaagacacatgggaaacatcaagcacat 5196735  T
Q  206 ttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatg 305  Q
     |||||| |||| || |||||||||| |||||||||| |||||||| || |||| ||| ||||| || ||||||||||  || ||| ||||| ||||||     
T  5196736 atctcttgcacaaattatcctttgtagcaagtctatttagaaagagtcgtcagataaagatattcacttttaacgaaatcgccttaagccac-aaaaatt 5196834  T
Q  306 atgaaaatcctc-agtaatgttattgtcaaccgttgttaagtaagaatacgcagatt 361  Q
    || |||  || | |||||||||| |||||||||| || ||||||||||| |||||||    
T  5196835 atcaaaccccaccagtaatgttaatgtcaaccgtcgtgaagtaagaataagcagatt 5196891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 223 - 350
Target Start/End: Complemental strand, 40891866 - 40891739
Alignment:
Q  223 tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa 322  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| ||||| ||||| | ||| |||||| ||||  |||| |||| ||| ||  |||| |    
T  40891866 tcctttgtagcaagtctattcagaaagagacgccaaacaaaaatgttaacttttaagggaaccgctttaagccataaaaattgatcaaactctgcagtga 40891767  T
Q  323 tgttattgtcaaccgttgttaagtaaga 350  Q
    ||||| |||| |||| ||||||||||||    
T  40891766 tgttagtgtccaccgctgttaagtaaga 40891739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 199 - 372
Target Start/End: Original strand, 12121682 - 12121855
Alignment:
Q  199 agaacatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacg 298  Q
    |||||||| ||||| |  |||| |||||||||| ||||||||||||||||||| ||||| |||||||||||||| ||||| |  || |||||| ||||      
T  12121682 agaacattcctcttgcgaagattatcctttgtagcaagtctattcagaaagagccgccaaacaaaaatattaacttttaagggtaccgctttaagccata 12121781  T
Q  299 aaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcactgtgtat 372  Q
    |||| |||| |||||   |||| |||||| | || |||| |||||| |||||||| || || ||||| ||||||    
T  12121782 aaaattgatcaaaatttgcagtgatgttagtctccaccgctgttaaataagaataagctgaatgcaccgtgtat 12121855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 223 - 347
Target Start/End: Original strand, 586904 - 587028
Alignment:
Q  223 tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa 322  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||||||| | ||| |||||| ||||  ||||| ||| ||| ||  |||| |    
T  586904 tcctttgtagcaagtctattcaaaaagagacgccaaacaaaaatattaacctttaagggaaccgctttaagccataaaaaacgatcaaactctgcagtga 587003  T
Q  323 tgttattgtcaaccgttgttaagta 347  Q
    |||||  ||| |||| |||||||||    
T  587004 tgttagagtcgaccgctgttaagta 587028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 190 - 275
Target Start/End: Complemental strand, 20705627 - 20705542
Alignment:
Q  190 gaaacatccagaacatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctt 275  Q
    ||||| || ||||| |||||||| | ||||| |||||||||  |||||||||||||||| |||||||| |||||||||||||||||    
T  20705627 gaaacctcaagaacgtttctcttgcgcagattatcctttgttgcaagtctattcagaaaaagacgccatacaaaaatattaacctt 20705542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 190 - 275
Target Start/End: Complemental strand, 20873671 - 20873586
Alignment:
Q  190 gaaacatccagaacatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctt 275  Q
    ||||| || ||||| |||||||| | ||||| |||||||||  |||||||||||||||| |||||||| |||||||||||||||||    
T  20873671 gaaacctcaagaacgtttctcttgcgcagattatcctttgttgcaagtctattcagaaaaagacgccatacaaaaatattaacctt 20873586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 226 - 290
Target Start/End: Complemental strand, 22865847 - 22865783
Alignment:
Q  226 tttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgcttt 290  Q
    |||||| ||||||||||||||||||||||||| |||||||| |||||||| |||| |||||||||    
T  22865847 tttgtagcaagtctattcagaaagagacgccaaacaaaaatgttaaccttcaacggaactgcttt 22865783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 226 - 290
Target Start/End: Original strand, 47548969 - 47549033
Alignment:
Q  226 tttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgcttt 290  Q
    |||||| ||||||||||||||||||||||||| |||||||| |||||||| |||| |||||||||    
T  47548969 tttgtagcaagtctattcagaaagagacgccaaacaaaaatgttaaccttcaacggaactgcttt 47549033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 226 - 290
Target Start/End: Original strand, 47553412 - 47553476
Alignment:
Q  226 tttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgcttt 290  Q
    |||||| ||||||||||||||||||||||||| |||||||| |||||||| |||| |||||||||    
T  47553412 tttgtagcaagtctattcagaaagagacgccaaacaaaaatgttaaccttcaacggaactgcttt 47553476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 222 - 279
Target Start/End: Original strand, 27869019 - 27869076
Alignment:
Q  222 atcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaac 279  Q
    |||||||||| ||||||||||||||||||||||||| ||||| || ||||||||||||    
T  27869019 atcctttgtagcaagtctattcagaaagagacgccaaacaaatatgttaacctttaac 27869076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 368
Target Start/End: Original strand, 34981961 - 34982112
Alignment:
Q  217 agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcct 316  Q
    |||| |||||||||| |||| | |||||||||||| | ||| |||||||||||||||||||| |  || |||||| ||||  |||| |||| ||| ||      
T  34981961 agattatcctttgtagcaaggcgattcagaaagagcctccaaacaaaaatattaacctttaaagggaccgctttaagccataaaaactgatcaaactctg 34982060  T
Q  317 cagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcactgt 368  Q
    || | || ||| | || |||||||||||||||||||| || || ||||||||    
T  34982061 cattgatattagtatccaccgttgttaagtaagaataagctgaatgcactgt 34982112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 313
Target Start/End: Complemental strand, 36575490 - 36575394
Alignment:
Q  217 agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaat 313  Q
    |||| |||||||||| |||||||||||||||| || ||||| ||||||||||| || ||||| | ||| |||||| ||||  |||| |||| |||||    
T  36575490 agattatcctttgtagcaagtctattcagaaaaagccgccaaacaaaaatattgacttttaagggaaccgctttaagccataaaaattgatcaaaat 36575394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 217 - 350
Target Start/End: Complemental strand, 37075698 - 37075565
Alignment:
Q  217 agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcct 316  Q
    |||| |||||||||| |||||| |||| ||||||| | ||| |||||||||||||| ||||| | ||| |||||| ||||  |||| |||| ||| ||      
T  37075698 agattatcctttgtagcaagtcgattctgaaagagcctccaaacaaaaatattaacttttaaaggaaccgctttaagccataaaaattgatcaaactctg 37075599  T
Q  317 cagtaatgttattgtcaaccgttgttaagtaaga 350  Q
    |||| || ||| | || |||||||||||| ||||    
T  37075598 cagtgatattagtatccaccgttgttaagaaaga 37075565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 27990259 - 27990204
Alignment:
Q  17 accctccaaaagcacaaaaccgattttaatgagtatataagtcaccaagaagaact 72  Q
    ||||||||| |||||||||| ||||| ||||||||||||| || ||| ||||||||    
T  27990259 accctccaagagcacaaaactgatttgaatgagtatataaatcgccatgaagaact 27990204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 221; Significance: 1e-121; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 17 - 476
Target Start/End: Original strand, 26995878 - 26996344
Alignment:
Q  17 accctccaaaagcacaaaaccgattttaatgagtatataagtcaccaagaagaactgtattgatatcaagtcaaagggatattagaagccacaaacgacc 116  Q
    ||||||||| || ||||||| ||||| |||||| ||||||||| ||| |||||||||||| |||| |||| ||| | ||||| |||||||||||||||||    
T  26995878 accctccaagagtacaaaactgatttgaatgagcatataagtcgccatgaagaactgtatcgataccaagccaatgagatatcagaagccacaaacgacc 26995977  T
Q  117 gtaatgatcacacttaaaaaacaaatggtttctatcctctacacccccacatgaagtcacacaagatatcagtgaaacatccagaacatttctcttccac 216  Q
     || |||||||| || |||||||||| || ||||||||||| |  | ||||||||| |||||||||||   |||| |||||||||||||||||||||  |    
T  26995978 atagtgatcaca-ttgaaaaacaaatagtctctatcctctatagtctcacatgaagccacacaagatacttgtgagacatccagaacatttctcttctgc 26996076  T
Q  217 agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcct 316  Q
    | || |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||| | |||| ||||||||||||||||||    
T  26996077 aaattatcctttgcaccaagtctattcagaaagagacgccagacaaaaatattaacctttaacggaatcgctttcttccacaaaaaatgatgaaaatcct 26996176  T
Q  317 cagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcactgtgtatttgttggaagggtaaagttttcaca--cacctatcagccatgtc 414  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||  ||||| ||||  |||||||||||||||||    
T  26996177 cagtaatattattatcaaccgttgttaagtaagaataagcagattgcacggtgtatttgttggaagggtgtagtttccacacccacctatcagccatgtc 26996276  T
Q  415 aacctac-aaacaagaacagacaa-----ccactcactcccccaccaaaacctcctcccacgcaaata 476  Q
    ||||| | ||||||||||||||||     |||| |||||| |||||||| ||||||||||||||||||    
T  26996277 aacctgcaaaacaagaacagacaaccgctccacacactcctccaccaaagcctcctcccacgcaaata 26996344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 17 - 476
Target Start/End: Complemental strand, 24545365 - 24544899
Alignment:
Q  17 accctccaaaagcacaaaaccgattttaatgagtatataagtcaccaagaagaactgtattgatatcaagtcaaagggatattagaagccacaaacgacc 116  Q
    ||||| ||| ||||||||||  |||| ||||||||||||||||  || |||||| ||||| |||| |||| ||| ||||||| | ||| ||||||||| |    
T  24545365 accctgcaagagcacaaaactaatttcaatgagtatataagtcgtcatgaagaattgtatcgataccaagccaatgggatatcataaggcacaaacgatc 24545266  T
Q  117 gtaatgatcacacttaaaaaa-caaatggtttctatcctctacacccccacatgaagtcacacaagatatcagtgaaacatccagaacatttctcttcca 215  Q
    ||| ||||||||||||||||| |||||||| ||||||||||||| ||||| |||||| | ||||||||| |||||||||||| |||||||||||||| |     
T  24545265 gtagtgatcacacttaaaaaaacaaatggtctctatcctctacagccccaaatgaagccgcacaagataccagtgaaacatc-agaacatttctctttcg 24545167  T
Q  216 cagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcc 315  Q
     |||| |||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||| |||  ||||||| ||| ||||||||||||| |||    
T  24545166 aagattatcctttgtagcaagtctgttcagaaagagacgccagacaaaaatattaacttttaacggaaccactttatgacac-aaaaatgatgaaattcc 24545068  T
Q  316 tcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcactgtgtatttgttggaagggtaaagttttcacac--acctatcagccatgt 413  Q
    ||||||| ||||| ||||| || | ||||||||||||||||||||| |||| |||||||||||||||| | |||||| |||||  ||||||||||| ||     
T  24545067 tcagtaacgttatcgtcaatcgctattaagtaagaatacgcagattacactatgtatttgttggaaggatgaagtttccacacccacctatcagccgtgc 24544968  T
Q  414 caacctacaaa-caagaacagacaacc-----actcactcccccaccaaaacctcctcccacgcaaata 476  Q
    |||||| |||| ||| |||||||||||     || ||||||||||||||||||||| ||||| ||||||    
T  24544967 caacctgcaaaacaacaacagacaaccgttccacgcactcccccaccaaaacctccccccacacaaata 24544899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 17 - 280
Target Start/End: Original strand, 40392619 - 40392882
Alignment:
Q  17 accctccaaaagcacaaaaccgattttaatgagtatataagtcaccaagaagaactgtattgatatcaagtcaaagggatattagaagccacaaacgacc 116  Q
    ||||||||| |||||||||| ||||| |||||| ||||||||| | | |||||||||||| |||| |||||||| | ||||| ||||||||||||| |||    
T  40392619 accctccaagagcacaaaactgatttgaatgagcatataagtcgcaatgaagaactgtatcgataccaagtcaatgagatatcagaagccacaaacaacc 40392718  T
Q  117 gtaatgatcacacttaaaaaacaaatggtttctatcctctacacccccacatgaagtcacacaagatatcagtgaaacatccagaacatttctcttccac 216  Q
    ||| ||||||||||| ||||||||||||| ||||||||||||| |||||||||||| | || ||||||   |||||||||||||||||| |||| ||| |    
T  40392719 gtagtgatcacacttgaaaaacaaatggtgtctatcctctacagccccacatgaagccgcataagatacttgtgaaacatccagaacatatctcgtccgc 40392818  T
Q  217 agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacg 280  Q
    | ||  |||||| ||  ||||||||| | ||| || ||||||||||||||||||||||||||||    
T  40392819 aaattgtcctttatagtaagtctatttaaaaaaagtcgccagacaaaaatattaacctttaacg 40392882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 103 - 353
Target Start/End: Complemental strand, 28521059 - 28520809
Alignment:
Q  103 agccacaaacgaccgtaatgatcacacttaaaaaacaaatggtttctatcctctacacccccacatgaagtcacacaagatatcagtgaaacatccagaa 202  Q
    |||||||| |||||||| || ||||||||||||||||||||||  || |||||||   | |||||| | ||| ||||||| |  || || ||||| ||||    
T  28521059 agccacaatcgaccgtagtggtcacacttaaaaaacaaatggtccctgtcctctaactcaccacataaggtcgcacaagacacaagggagacatcaagaa 28520960  T
Q  203 catttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaa 302  Q
    |||| ||| | |||| || ||||| |||| ||||||||||||| ||||||||||| ||||| ||||| |||||||||||||| |||||| ||||| ||||    
T  28520959 cattcctcatacacaaattatcctctgtagcaagtctattcaggaagagacgccatacaaatatattcacctttaacgaaaccgctttaagccacaaaaa 28520860  T
Q  303 atgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaata 353  Q
     |||||||| || ||| | |||||| |||||||| ||||||| ||||||||    
T  28520859 ttgatgaaactcttcaatgatgttaatgtcaaccattgttaaataagaata 28520809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 217 - 372
Target Start/End: Original strand, 10004045 - 10004200
Alignment:
Q  217 agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcct 316  Q
    |||| |||||||||| ||||||||||||||||||| |||||  |||||||||| || ||||| | ||| |||||| ||||  |||| |||| ||||||      
T  10004045 agattatcctttgtagcaagtctattcagaaagagccgccaagcaaaaatattgacttttaaaggaaccgctttaagccataaaaattgatcaaaatctg 10004144  T
Q  317 cagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcactgtgtat 372  Q
    |||| |||||| |||| |||| ||||||||||||||| ||||| ||||| ||||||    
T  10004145 cagtgatgttagtgtccaccgctgttaagtaagaataagcagaatgcaccgtgtat 10004200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 372
Target Start/End: Original strand, 27030066 - 27030221
Alignment:
Q  217 agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcct 316  Q
    |||| ||||||| || |||||||||||| ||| || ||||| ||||||||||| || ||||| | ||| |||||| ||||  |||| |||| ||||||      
T  27030066 agattatcctttatagcaagtctattcaaaaaaagccgccaaacaaaaatattgacttttaagggaaccgctttaagccataaaaattgatcaaaatctg 27030165  T
Q  317 cagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcactgtgtat 372  Q
    |||| |||||| |||| |||| ||||||||||||||| ||||| ||||| ||||||    
T  27030166 cagtgatgttagtgtccaccgctgttaagtaagaataagcagaatgcaccgtgtat 27030221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 223 - 350
Target Start/End: Complemental strand, 41342910 - 41342783
Alignment:
Q  223 tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa 322  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||| ||||| ||||| | ||| |||||| ||||  |||| |||| ||| ||  |||| |    
T  41342910 tcctttgtagcaaatctattcagaaagagacgccaaacaaaaatgttaacttttaaaggaaccgctttaagccataaaaattgatcaaactctgcagtga 41342811  T
Q  323 tgttattgtcaaccgttgttaagtaaga 350  Q
    ||||| | || |||| ||||||||||||    
T  41342810 tgttagtatccaccgctgttaagtaaga 41342783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 226 - 280
Target Start/End: Original strand, 37668976 - 37669030
Alignment:
Q  226 tttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacg 280  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  37668976 tttgtatcaagtctattcagaaagagacgccaaacaaaaatgttaaccttcaacg 37669030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 350
Target Start/End: Original strand, 49369887 - 49370014
Alignment:
Q  223 tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa 322  Q
    ||||||||| ||||||||||||||||||||||||| | |||||| ||||| ||||| | ||| |||||| ||||  |||| |||| ||| ||  |||| |    
T  49369887 tcctttgtagcaagtctattcagaaagagacgccaaaaaaaaatgttaacttttaagggaaccgctttaagccataaaaattgatcaaactctgcagtga 49369986  T
Q  323 tgttattgtcaaccgttgttaagtaaga 350  Q
    | ||  |||| ||||||||||| |||||    
T  49369987 tattggtgtccaccgttgttaaataaga 49370014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 19 - 476
Target Start/End: Original strand, 10981 - 11446
Alignment:
Q  19 cctccaaaagcacaaaaccgattttaatgagtatataagtcaccaagaagaactgtattgatatcaagtcaaagggatattagaagccacaaacgaccgt 118  Q
    ||||||| |||||||||  ||||| ||||| ||||||| || ||| |||||||||||| |||| |||| ||| |||| || | |||||||||||||||||    
T  10981 cctccaagagcacaaaattgatttgaatgattatataaatcgccatgaagaactgtatcgataccaagccaatgggagatcaaaagccacaaacgaccgt 11080  T
Q  119 aatgatcacacttaaaaaacaaatggtttctatcctctacacccccacatgaagtcacacaagatatcagtgaaacatccagaacatttctcttccacag 218  Q
    ||||||||||||||||||||||||||||| | ||||||| | || ||||||||| |||| |||||| ||| || ||||| |||||||||||||||| |||    
T  11081 aatgatcacacttaaaaaacaaatggtttatgtcctctaaatccacacatgaagccacataagataccagggagacatctagaacatttctcttccgcag 11180  T
Q  219 ataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctca 318  Q
    || ||||||||||  |||||||||||| |||||||  || ||||| |||||||||||||||| |||  |||| |||||| ||||||||||||||||||||    
T  11181 attatcctttgtagaaagtctattcaggaagagacatcatacaaatatattaacctttaacggaacctctttgtgccacaaaaaatgatgaaaatcctca 11280  T
Q  319 gtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcactgtgtatttgttggaagggtaaagttttcaca-cacctatcagccatgtcaac 417  Q
    ||||| ||| ||||||| | ||||||||||||||| ||||||||||| |||||||| || |||||||  ||||| |||| || | |||||||||| ||||    
T  11281 gtaatattagtgtcaactgctgttaagtaagaataagcagattgcacagtgtatttattcgaagggtggagtttccacaccatccatcagccatgccaac 11380  T
Q  418 ctacaaa--caagaacagacaa-----ccactcactcccccaccaaaacctcctcccacgcaaata 476  Q
    || ||||   |||| |||||||     |||| |||||||||| |||||||||||||||| ||||||    
T  11381 ctgcaaaacaaagaccagacaacccctccacacactcccccatcaaaacctcctcccacacaaata 11446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 154; Significance: 2e-81; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 32 - 382
Target Start/End: Original strand, 24059572 - 24059924
Alignment:
Q  32 aaaaccgattttaatgagtatataagtcaccaagaagaactgtattgatatcaagtcaaagggatattagaagccacaaacgaccgtaatgatcacactt 131  Q
    ||||| ||||| |||||| ||||||||| ||| |||||||||||| |||| |||| ||| ||||||| |||||||||||||||||||| |||||||||||    
T  24059572 aaaactgatttgaatgagcatataagtcgccatgaagaactgtatcgataccaagccaatgggatatcagaagccacaaacgaccgtagtgatcacactt 24059671  T
Q  132 aaaaaacaaatggtttctatcctctacacccccacatgaagtcacacaagatatcagtgaaacatccagaacatttctcttccacagataatcctttgta 231  Q
    |||||||||||||| ||||||||||||| |||||||||||| |  |||||||| | |||||||||||||||| | |||| ||| || ||  |||||||||    
T  24059672 aaaaaacaaatggtctctatcctctacagccccacatgaagccgtacaagatacctgtgaaacatccagaacctgtctcgtccgcaaattgtcctttgta 24059771  T
Q  232 tcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaatgttattgt 331  Q
     |||||||| ||| ||||||||| || |||||||||||||| ||||||||||| | ||||||  |   ||||||| ||||||||||| |||| |||||||    
T  24059772 gcaagtctactcataaagagacgtcaaacaaaaatattaacttttaacgaaaccgttttatgttatagaaaatgacgaaaatcctcactaatattattgt 24059871  T
Q  332 caaccgttgttaagtaagaatacgcagattg--cactgtgtatttgttggaag 382  Q
    |||   |||||||||||||||| ||| ||||  ||| ||||||||||||||||    
T  24059872 caaatattgttaagtaagaataagcatattgtacacggtgtatttgttggaag 24059924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 249 - 476
Target Start/End: Original strand, 25135450 - 25135685
Alignment:
Q  249 gagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctca-gtaatgttattgtcaaccgttgttaagta 347  Q
    ||||||| ||||||| |||||||||||||| | ||| |||||| ||||  |||||| ||||||||| | | ||||| ||| ||||||||| |||||| ||    
T  25135450 gagacgctagacaaatatattaacctttaatggaaccgctttaagccaaaaaaaattatgaaaatcttaaagtaatattagtgtcaaccgctgttaaata 25135549  T
Q  348 agaatacgcagattgcactgtgtatttgttggaagggtaaag-ttttcacacacctatcagccatgtcaacctaca-aacaagaacagacaa-----cca 440  Q
    |||||| ||||||||||| |||||||||| |||||| | ||| ||  ||| ||||||||||||||| |||||| || |||||||||||||||     |||    
T  25135550 agaataagcagattgcacggtgtatttgtgggaaggatgaagcttcccacccacctatcagccatgccaacctgcataacaagaacagacaaccgctcca 25135649  T
Q  441 ctcactcccccaccaaaacctcctcccacgcaaata 476  Q
    | |||||||||||||||||||| |||||||||||||    
T  25135650 cacactcccccaccaaaacctcatcccacgcaaata 25135685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 199 - 353
Target Start/End: Complemental strand, 23158276 - 23158122
Alignment:
Q  199 agaacatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacg 298  Q
    |||||||| ||||| |  |||| |||||||||| ||||||||||||||||||| ||||| |||||||||||||| ||||| |  ||||||||| ||||      
T  23158276 agaacattcctcttgcgaagattatcctttgtagcaagtctattcagaaagagccgccaaacaaaaatattaacttttaaggggactgctttaagccata 23158177  T
Q  299 aaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaata 353  Q
    |||| |||| |||||   |||| |||||| |||| |||| |||||||||||||||    
T  23158176 aaaattgatcaaaatatgcagtgatgttagtgtccaccgctgttaagtaagaata 23158122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 199 - 353
Target Start/End: Complemental strand, 36279329 - 36279175
Alignment:
Q  199 agaacatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacg 298  Q
    |||||||| ||||| |  |||| |||||||||| ||||||||||||||||||  ||||| |||||||||||||| ||||| | ||| |||||| ||||      
T  36279329 agaacattcctcttacgaagattatcctttgtagcaagtctattcagaaagaaccgccaaacaaaaatattaacttttaagggaaccgctttaagccata 36279230  T
Q  299 aaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaata 353  Q
    |||| |||| ||||||  |||| |||||| |||| |||| |||||||||||||||    
T  36279229 aaaattgatcaaaatctgcagtgatgttagtgtccaccgctgttaagtaagaata 36279175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 199 - 372
Target Start/End: Original strand, 51872781 - 51872954
Alignment:
Q  199 agaacatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacg 298  Q
    |||||||| ||||| |  |||| |||||||||| ||||||||||||||||||| ||||| |||||||||||||| ||||| |  || |||||| ||||      
T  51872781 agaacattcctcttgcgaagattatcctttgtagcaagtctattcagaaagagccgccaaacaaaaatattaacttttaagggtaccgctttaagccata 51872880  T
Q  299 aaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcactgtgtat 372  Q
    |||| |||  ||||||  |||| |||||| ||||  ||| |||||| |||||||| || || ||||| ||||||    
T  51872881 aaaattgaacaaaatctgcagtgatgttagtgtctgccgctgttaaataagaataagctgaatgcaccgtgtat 51872954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 8111038 - 8111111
Alignment:
Q  223 tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgcca 296  Q
    ||||||||  ||||||||||||||||||||||||| |||||||||||||||||||| | ||| |||||| ||||    
T  8111038 tcctttgttgcaagtctattcagaaagagacgccatacaaaaatattaacctttaatggaaccgctttaagcca 8111111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 223 - 368
Target Start/End: Complemental strand, 17826883 - 17826738
Alignment:
Q  223 tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa 322  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| ||||| ||||| |||||  ||||| ||||  |||| |||| ||| ||  |||| |    
T  17826883 tcctttgtagcaagtctattcagaaagagacgccaaacaaaaatgttaacttttaaggaaaccactttaagccataaaaattgatcaaactctacagtga 17826784  T
Q  323 tgttattgtcaaccgttgttaagtaagaatacgcagattgcactgt 368  Q
    | ||  |||| ||||||||||| ||||| || || || ||||||||    
T  17826783 tattgatgtccaccgttgttaaataagagtaagctgaatgcactgt 17826738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 217 - 368
Target Start/End: Complemental strand, 15649175 - 15649024
Alignment:
Q  217 agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcct 316  Q
    |||| |||||||||| |||| | |||||||||||| | ||| |||||||||||||||||||| |  ||||||||| ||||  | ||||||| ||| ||      
T  15649175 agattatcctttgtagcaaggcgattcagaaagagcctccaaacaaaaatattaacctttaaagggactgctttaagccataataaatgatcaaactctg 15649076  T
Q  317 cagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcactgt 368  Q
    || | || ||| | || |||||||||||||||||||| || || ||||||||    
T  15649075 cattgatattagtatccaccgttgttaagtaagaataagctgaatgcactgt 15649024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 223 - 350
Target Start/End: Complemental strand, 18116484 - 18116357
Alignment:
Q  223 tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa 322  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||| ||||| ||||| | ||| |||||| ||||  |||| |||| ||| ||  |||| |    
T  18116484 tcctttgtagcaaatctattcagaaagagacgccaaacaaaaatgttaacttttaaaggaaccgctttaagccataaaaattgatcaaactctgcagtga 18116385  T
Q  323 tgttattgtcaaccgttgttaagtaaga 350  Q
    ||||| | || |||| ||||||||||||    
T  18116384 tgttagtatccaccgctgttaagtaaga 18116357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 223 - 353
Target Start/End: Complemental strand, 29123541 - 29123410
Alignment:
Q  223 tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaa-cgaaactgctttatgccacgaaaaatgatgaaaatcctcagta 321  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| ||||| |||||  ||||| |||||| ||||  |||| |||| ||| ||  ||||     
T  29123541 tcctttgtagcaagtctattcagaaagagacgccaaacaaaaatgttaacttttaagggaaaccgctttaagccataaaaattgatcaaactctgcagtg 29123442  T
Q  322 atgttattgtcaaccgttgttaagtaagaata 353  Q
    || ||  |||| ||||||||||| ||||||||    
T  29123441 atattgatgtccaccgttgttaaataagaata 29123410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 223 - 296
Target Start/End: Complemental strand, 4303304 - 4303231
Alignment:
Q  223 tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgcca 296  Q
    ||||||||| |||||||||||||||| |||||||| |||||||||||||| ||||| | ||| |||||| ||||    
T  4303304 tcctttgtagcaagtctattcagaaaaagacgccaaacaaaaatattaacttttaagggaaccgctttaagcca 4303231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 225 - 297
Target Start/End: Original strand, 12915913 - 12915985
Alignment:
Q  225 ctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccac 297  Q
    ||||||| ||| ||||||||||||||||||||| |||||||| ||||||||||||| ||| || ||| |||||    
T  12915913 ctttgtagcaattctattcagaaagagacgccaaacaaaaatgttaacctttaacggaaccgccttaagccac 12915985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 226 - 290
Target Start/End: Original strand, 36951324 - 36951388
Alignment:
Q  226 tttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgcttt 290  Q
    |||||| ||||||||||||||||||||||||| |||||||| |||||||| |||| ||| |||||    
T  36951324 tttgtagcaagtctattcagaaagagacgccatacaaaaatgttaaccttcaacggaaccgcttt 36951388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 226 - 290
Target Start/End: Complemental strand, 50693853 - 50693789
Alignment:
Q  226 tttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgcttt 290  Q
    |||||| ||||||||||||||||||||||||| |||||||| |||||||| |||| ||| |||||    
T  50693853 tttgtagcaagtctattcagaaagagacgccaaacaaaaatgttaaccttcaacggaaccgcttt 50693789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 278
Target Start/End: Original strand, 3621622 - 3621677
Alignment:
Q  223 tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaa 278  Q
    ||||||||  |||||||||||||||| |||||||| ||||||||||||||||||||    
T  3621622 tcctttgttgcaagtctattcagaaaaagacgccatacaaaaatattaacctttaa 3621677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 223 - 353
Target Start/End: Original strand, 22340699 - 22340829
Alignment:
Q  223 tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa 322  Q
    ||||||||| |||||||||| |||||||||||||| |||||||| ||||| ||||| | ||| |||||| ||||  |||| |||| |||  |  |||| |    
T  22340699 tcctttgtagcaagtctatttagaaagagacgccaaacaaaaatgttaacttttaagggaaccgctttaagccataaaaattgatcaaacactgcagtga 22340798  T
Q  323 tgttattgtcaaccgttgttaagtaagaata 353  Q
    | ||  |||| ||||||||||| ||||||||    
T  22340799 tattgatgtccaccgttgttaaataagaata 22340829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 25135278 - 25135407
Alignment:
Q  102 aagccacaaacgaccgtaatgatcacacttaaaaaacaaatggtttctatcctctacacccccacatgaagtcacacaagatatcagtgaaacatccaga 201  Q
    ||||||||| |||||  | ||||| ||||||||||||||||||| | | |||||||   ||||||| |||| | |||||||    || || |||||||||    
T  25135278 aagccacaatcgaccaaagtgatcgcacttaaaaaacaaatggtctttgtcctctaataccccacaagaagccgcacaagaagctagggagacatccaga 25135377  T
Q  202 acatttctcttccacagataatcctttgta 231  Q
    ||||||||||||| || || ||||||||||    
T  25135378 acatttctcttccgcaaattatcctttgta 25135407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 290
Target Start/End: Complemental strand, 17469223 - 17469159
Alignment:
Q  226 tttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgcttt 290  Q
    |||||| |||||||||||||||||||| |||| |||||||| |||||||| |||| ||| |||||    
T  17469223 tttgtagcaagtctattcagaaagagatgccaaacaaaaatgttaaccttcaacggaaccgcttt 17469159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 3e-37; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 17 - 207
Target Start/End: Original strand, 20007412 - 20007602
Alignment:
Q  17 accctccaaaagcacaaaaccgattttaatgagtatataagtcaccaagaagaactgtattgatatcaagtcaaagggatattagaagccacaaacgacc 116  Q
    ||||||||| | |||||||  ||||| |||||| ||||||||| ||| |||||||| ||| |||| |||| ||| ||||||| ||||||||||||| |||    
T  20007412 accctccaagaacacaaaattgatttgaatgagcatataagtcgccatgaagaactatatcgataccaagccaatgggatatcagaagccacaaacaacc 20007511  T
Q  117 gtaatgatcacacttaaaaaacaaatggtttctatcctctaca-cccccacatgaagtcacacaagatatcagtgaaacatccagaacattt 207  Q
    ||| ||||||||||| ||||||||||||| |||||||||||||   |||||||||||  |||||||||| | |||||||||| |||||||||    
T  20007512 gtagtgatcacactt-aaaaacaaatggtctctatcctctacagaacccacatgaagctacacaagatacctgtgaaacatctagaacattt 20007602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 199 - 353
Target Start/End: Original strand, 30275985 - 30276139
Alignment:
Q  199 agaacatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacg 298  Q
    |||||||| ||||| |  |||| |||||||||| | ||||||||||||||||| | ||| |||||||||||||| ||||| | ||| |||||| ||||      
T  30275985 agaacattcctcttgcgaagattatcctttgtagcgagtctattcagaaagagcctccaaacaaaaatattaacttttaagggaaccgctttaagccata 30276084  T
Q  299 aaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaata 353  Q
    |||| |||| ||||||  |||| |||||| |||| |||| |||||||||||||||    
T  30276085 aaaattgatcaaaatctgcagtgatgttagtgtccaccgctgttaagtaagaata 30276139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 203 - 365
Target Start/End: Original strand, 1258561 - 1258723
Alignment:
Q  203 catttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaa 302  Q
    ||||||| || |||| || ||| |||||| ||||||||||||||||||||||| | ||||| || |||||||| |||| ||| |||||   |||  ||||    
T  1258561 catttcttttacacaaattatcttttgtagcaagtctattcagaaagagacgcaaaacaaatatgttaaccttcaacggaaccgcttttaaccataaaaa 1258660  T
Q  303 atgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcac 365  Q
     |||| |||||| |||| ||||||| |||| ||||  |||||||| ||||| || ||||||||    
T  1258661 ttgattaaaatcttcagaaatgttagtgtccaccgccgttaagtacgaataagccgattgcac 1258723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 217 - 353
Target Start/End: Original strand, 23384957 - 23385093
Alignment:
Q  217 agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcct 316  Q
    |||| |||||||||| || |||||||||||||||| ||||| |||||||||||||| ||||| | ||| |||||| ||||  |||| |||| ||| ||      
T  23384957 agattatcctttgtagcatgtctattcagaaagagccgccaaacaaaaatattaacttttaaaggaaccgctttaagccataaaaattgatcaaactctg 23385056  T
Q  317 cagtaatgttattgtcaaccgttgttaagtaagaata 353  Q
    |||| || ||| | || |||  |||||||||||||||    
T  23385057 cagtgatattagtatccaccactgttaagtaagaata 23385093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 353
Target Start/End: Original strand, 32349993 - 32350124
Alignment:
Q  222 atcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagta 321  Q
    |||||||||| ||||||||||||||||||| | | | |||||||||||||| ||||| | ||  |||||| ||||  |||| |||| ||||||  ||||     
T  32349993 atcctttgtagcaagtctattcagaaagagccacgaaacaaaaatattaacttttaagggaatcgctttaagccataaaaattgatcaaaatctgcagtg 32350092  T
Q  322 atgttattgtcaaccgttgttaagtaagaata 353  Q
    || ||| | || |||| |||||||||||||||    
T  32350093 atattagtatccaccgctgttaagtaagaata 32350124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 353
Target Start/End: Original strand, 21963522 - 21963658
Alignment:
Q  217 agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcct 316  Q
    |||| |||||||||| |||||| |||||||||||| | ||| |||||||||||||| ||||| |  || |||||| ||||  |||| |||| ||| ||      
T  21963522 agattatcctttgtagcaagtcgattcagaaagagcctccaaacaaaaatattaacttttaaagggaccgctttaagccataaaaattgatcaaactctg 21963621  T
Q  317 cagtaatgttattgtcaaccgttgttaagtaagaata 353  Q
    |||| |  ||| | || ||||||||||||||||||||    
T  21963622 cagtgagattagtatccaccgttgttaagtaagaata 21963658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 353
Target Start/End: Original strand, 21964707 - 21964843
Alignment:
Q  217 agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcct 316  Q
    |||| |||||||||| |||||| |||||||||||| | ||| |||||||||||||| ||||| |  || |||||| ||||  |||| |||| ||| ||      
T  21964707 agattatcctttgtagcaagtcgattcagaaagagcctccaaacaaaaatattaacttttaaagggaccgctttaagccataaaaattgatcaaactctg 21964806  T
Q  317 cagtaatgttattgtcaaccgttgttaagtaagaata 353  Q
    |||| |  ||| | || ||||||||||||||||||||    
T  21964807 cagtgagattagtatccaccgttgttaagtaagaata 21964843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 38938592 - 38938665
Alignment:
Q  223 tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgcca 296  Q
    |||||||||  |||||||||||||||||||||||| |||||||| ||||  ||||| | ||| |||||| ||||    
T  38938592 tcctttgtagtaagtctattcagaaagagacgccaaacaaaaatgttaatttttaagggaaccgctttaagcca 38938665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 27914709 - 27914654
Alignment:
Q  217 agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaac 272  Q
    |||| |||||||||| ||||||||||||||||||  || || ||||||||||||||    
T  27914709 agattatcctttgtagcaagtctattcagaaagaaccgtcaaacaaaaatattaac 27914654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 223 - 365
Target Start/End: Original strand, 17228056 - 17228198
Alignment:
Q  223 tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa 322  Q
    ||||||||| |||||||||| |||||||||||||||||||| || || || ||||||| |||||||||| ||||| ||||||||||||| || ||||| |    
T  17228056 tcctttgtagcaagtctatttagaaagagacgccagacaaatatgttcacatttaacggaactgctttaagccacaaaaaatgatgaaactcttcagtga 17228155  T
Q  323 tgttattgtcaaccgttgttaagtaagaatacgcagattgcac 365  Q
    | ||| ||||||||| |||||| ||||||||||| ||||||||    
T  17228156 ttttagtgtcaaccgctgttaaataagaatacgccgattgcac 17228198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 217 - 372
Target Start/End: Original strand, 2894351 - 2894506
Alignment:
Q  217 agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcct 316  Q
    |||| |||||||||| |||||||||||||||| || ||||| |||||||||||||| ||||| | ||| |||||| ||||   ||| |||| ||||||      
T  2894351 agattatcctttgtagcaagtctattcagaaaaagccgccaaacaaaaatattaacttttaagggaaccgctttaagccatagaaattgatcaaaatctg 2894450  T
Q  317 cagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcactgtgtat 372  Q
    |||| |||||| | || |||| ||||||||||||||| ||||| ||||| ||||||    
T  2894451 cagtgatgttagtatccaccgctgttaagtaagaataagcagaatgcaccgtgtat 2894506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 222 - 314
Target Start/End: Complemental strand, 7218453 - 7218361
Alignment:
Q  222 atcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatc 314  Q
    |||||||||| |||||||||||||||| |||||||| |||||||| ||||||||||||| ||| || ||| ||||  |||| |||||||||||    
T  7218453 atcctttgtagcaagtctattcagaaaaagacgccaaacaaaaatgttaacctttaacggaaccgccttaagccataaaaattgatgaaaatc 7218361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 199 - 353
Target Start/End: Complemental strand, 18295522 - 18295368
Alignment:
Q  199 agaacatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacg 298  Q
    |||||||| ||||| |  |||| |||||||||| ||||||||||||||||||| ||||| |||||||||||||| ||||| |  || |||||| ||||      
T  18295522 agaacattcctcttgcgaagattatcctttgtagcaagtctattcagaaagagccgccaaacaaaaatattaacttttaagggtaccgctttaagccata 18295423  T
Q  299 aaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaata 353  Q
    |||| |||| |||||   |||| |||||| | || |||| |||||| ||||||||    
T  18295422 aaaattgatcaaaatatgcagtgatgttagtatccaccgctgttaaataagaata 18295368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 223 - 368
Target Start/End: Original strand, 667385 - 667530
Alignment:
Q  223 tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa 322  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||| | |||  ||||| ||||  |||| |||| ||| ||  |||| |    
T  667385 tcctttgtagcaagtctattcagaaagagacgccaaacaaaaatgttaacctttaagggaaccactttaagccataaaaattgattaaactctgcagtga 667484  T
Q  323 tgttattgtcaaccgttgttaagtaagaatacgcagattgcactgt 368  Q
    ||||  |||| |||| |||||| ||||| || || || ||||||||    
T  667485 tgttgatgtccaccgctgttaaataagagtaagctgaatgcactgt 667530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 278
Target Start/End: Complemental strand, 28604989 - 28604934
Alignment:
Q  223 tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaa 278  Q
    ||||||||  |||||||||||||||| |||||||| ||||||||||||||||||||    
T  28604989 tcctttgttgcaagtctattcagaaaaagacgccatacaaaaatattaacctttaa 28604934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 1e-23; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 199 - 371
Target Start/End: Original strand, 3514780 - 3514952
Alignment:
Q  199 agaacatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacg 298  Q
    |||||||| ||||| |  |||| |||||||||| ||||||||||||||||||  ||||| |||||||||||||| ||||| |  || |||||| ||||      
T  3514780 agaacattcctcttgcgaagattatcctttgtagcaagtctattcagaaagaaccgccaaacaaaaatattaacttttaagggtaccgctttaagccata 3514879  T
Q  299 aaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcactgtgta 371  Q
    |||| |||| ||||||  |||| |||||| |||| |||| ||||||||||||||| || || ||||| |||||    
T  3514880 aaaattgatcaaaatctgcagtgatgttagtgtccaccgctgttaagtaagaataagctgaatgcaccgtgta 3514952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 223 - 371
Target Start/End: Original strand, 48547674 - 48547822
Alignment:
Q  223 tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa 322  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||  |||| |||| ||| ||  |||| |    
T  48547674 tcctttgttgcaagtctattcagaaagagacgccagacaaaaatattaacctttaatggaactgctttaagccataaaaattgattaaactctgcagtga 48547773  T
Q  323 tgttattgtcaaccgttgttaagtaagaatacgcagattgcactgtgta 371  Q
    ||||   ||| ||||| ||||| |||||||| || || ||||| |||||    
T  48547774 tgttgaagtccaccgtcgttaaataagaataagctgaatgcaccgtgta 48547822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 217 - 365
Target Start/End: Original strand, 9819174 - 9819322
Alignment:
Q  217 agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcct 316  Q
    |||| |||||||||| |||||||||||||||| || ||||| ||| ||||||| || ||||| | ||| |||||| ||||  |||| |||| ||||||      
T  9819174 agattatcctttgtagcaagtctattcagaaaaagccgccaaacataaatattgacttttaagggaaccgctttaagccataaaaattgatcaaaatctg 9819273  T
Q  317 cagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcac 365  Q
    |||| |||||| |||| |||| ||||||||||||||| ||||| |||||    
T  9819274 cagtgatgttagtgtccaccgctgttaagtaagaataagcagaatgcac 9819322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 223 - 353
Target Start/End: Original strand, 23603382 - 23603512
Alignment:
Q  223 tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa 322  Q
    ||||| ||| ||||||||||||||||||| ||||| |||||||| ||||| ||||| | ||| |||||| ||||  |||| |||| ||| ||| || | |    
T  23603382 tccttagtagcaagtctattcagaaagagtcgccaaacaaaaatgttaacttttaaaggaaccgctttaagccataaaaattgatcaaactccgcaatga 23603481  T
Q  323 tgttattgtcaaccgttgttaagtaagaata 353  Q
    | |||||||| ||||||||||||||||||||    
T  23603482 tattattgtccaccgttgttaagtaagaata 23603512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 223 - 350
Target Start/End: Complemental strand, 23571723 - 23571596
Alignment:
Q  223 tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa 322  Q
    ||||||||| |||||||||||||||||||||| || |||||||| ||||| ||||| | ||| |||||| ||||  |||| |||| ||| ||  |||| |    
T  23571723 tcctttgtagcaagtctattcagaaagagacgtcatacaaaaatgttaacttttaagggaaccgctttaagccataaaaattgatcaaactctacagtga 23571624  T
Q  323 tgttattgtcaaccgttgttaagtaaga 350  Q
    ||||| |||| |||| ||||||||||||    
T  23571623 tgttagtgtccaccgctgttaagtaaga 23571596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 223 - 353
Target Start/End: Original strand, 42462840 - 42462970
Alignment:
Q  223 tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa 322  Q
    ||||||||| |||||||||||||||||| |||||| |||||||| ||||| ||||| | | | | |||| ||||  |||| |||| ||| ||  ||||||    
T  42462840 tcctttgtagcaagtctattcagaaagaaacgccaaacaaaaatgttaacttttaagggagccgttttaagccataaaaattgatcaaactctgcagtaa 42462939  T
Q  323 tgttattgtcaaccgttgttaagtaagaata 353  Q
    ||||  |||| ||||||||||| ||||||||    
T  42462940 tgttgatgtccaccgttgttaaataagaata 42462970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 8595377 - 8595450
Alignment:
Q  223 tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgcca 296  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| ||||| ||||| | ||| |||||| ||||    
T  8595377 tcctttgtagcaagtctattcagaaagagacgccaaacaaaaatgttaacttttaaaggaaccgctttaagcca 8595450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 226 - 290
Target Start/End: Original strand, 16664099 - 16664163
Alignment:
Q  226 tttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgcttt 290  Q
    |||||| ||||||||||||||||||||||||| |||||||| |||||||| |||| ||| |||||    
T  16664099 tttgtagcaagtctattcagaaagagacgccaaacaaaaatgttaaccttcaacggaaccgcttt 16664163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 226 - 290
Target Start/End: Complemental strand, 39632931 - 39632867
Alignment:
Q  226 tttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgcttt 290  Q
    |||||| ||||||||||||||||||||||||| |||||||| |||||||| |||| ||| |||||    
T  39632931 tttgtagcaagtctattcagaaagagacgccaaacaaaaatgttaaccttcaacggaaccgcttt 39632867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 290
Target Start/End: Original strand, 10754162 - 10754250
Alignment:
Q  202 acatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgcttt 290  Q
    |||||||| || |||| || ||| |||||| |||||||||||| |||||||||||| ||||| || |||||||| |||| ||| |||||    
T  10754162 acatttcttttacacaaattatcttttgtagcaagtctattcataaagagacgccaaacaaagatgttaaccttcaacggaaccgcttt 10754250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 290
Target Start/End: Original strand, 52196409 - 52196473
Alignment:
Q  226 tttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgcttt 290  Q
    |||||| ||||||||||||||||||| ||||| |||||||| |||||||| |||| ||| |||||    
T  52196409 tttgtagcaagtctattcagaaagaggcgccaaacaaaaatgttaaccttcaacggaaccgcttt 52196473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 217 - 296
Target Start/End: Complemental strand, 17153915 - 17153836
Alignment:
Q  217 agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgcca 296  Q
    |||| |||||||||| |||||||||||| |||||| ||||| | |||||||||||| ||||| | ||| |||||| ||||    
T  17153915 agattatcctttgtagcaagtctattcataaagagccgccaaataaaaatattaacttttaatggaaccgctttaagcca 17153836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 223 - 350
Target Start/End: Complemental strand, 42459405 - 42459278
Alignment:
Q  223 tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa 322  Q
    ||||||||| ||| |||||||||||| ||||| || |||||||| ||||||||||||| |||  | ||| ||||  | || || | |||||| ||||| |    
T  42459405 tcctttgtagcaattctattcagaaaaagacgtcaaacaaaaatgttaacctttaacggaacctccttaagccataagaattggttaaaatcttcagtga 42459306  T
Q  323 tgttattgtcaaccgttgttaagtaaga 350  Q
    |||| ||||| |||| |||||| |||||    
T  42459305 tgttgttgtccaccgctgttaaataaga 42459278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 53152193 - 53152132
Alignment:
Q  217 agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaa 278  Q
    |||| |||||||||| |||||| |||| ||||||| | ||| |||||||||||||| |||||    
T  53152193 agattatcctttgtagcaagtcgattctgaaagagcctccaaacaaaaatattaacttttaa 53152132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 3e-21; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 223 - 371
Target Start/End: Complemental strand, 26077828 - 26077680
Alignment:
Q  223 tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa 322  Q
    ||||||||| ||||||||||||||||||| ||||| |||||||||||||| ||||| |  || |||||| ||||  |||| |||| ||||||  |||| |    
T  26077828 tcctttgtagcaagtctattcagaaagagccgccaaacaaaaatattaacttttaagggtaccgctttaagccataaaaattgatcaaaatctgcagtga 26077729  T
Q  323 tgttattgtcaaccgttgttaagtaagaatacgcagattgcactgtgta 371  Q
    ||||| |||| |||| ||||||| ||||||| || || ||||| |||||    
T  26077728 tgttagtgtccaccgctgttaagaaagaataagctgaatgcaccgtgta 26077680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 202 - 290
Target Start/End: Complemental strand, 10801803 - 10801715
Alignment:
Q  202 acatttctcttccacagataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgcttt 290  Q
    |||||||| || |||| || ||| |||||| ||||||||||||||||||||||||| |||||||| |||||||| |||| |||||||||    
T  10801803 acatttcttttacacaaattatcttttgtagcaagtctattcagaaagagacgccaaacaaaaatgttaaccttcaacggaactgcttt 10801715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 233 - 371
Target Start/End: Complemental strand, 31423333 - 31423195
Alignment:
Q  233 caagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaatgttattgtc 332  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| | ||| |||||| ||||  |||| |||| ||| ||  |||| |||||   | |    
T  31423333 caagtctattcagaaagagacgtcagacaaaaatattaacctttaagggaaccgctttaagccataaaaattgattaaactctgcagtgatgttgaagcc 31423234  T
Q  333 aaccgttgttaagtaagaatacgcagattgcactgtgta 371  Q
     ||||||||||| |||||||| || || ||||| |||||    
T  31423233 caccgttgttaaataagaataagctgaatgcaccgtgta 31423195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 227 - 278
Target Start/End: Complemental strand, 26390340 - 26390289
Alignment:
Q  227 ttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaa 278  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  26390340 ttgtagcaagtctattcagaaagagacgccagacaaaaatgttaacctttaa 26390289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 223 - 278
Target Start/End: Original strand, 29532477 - 29532532
Alignment:
Q  223 tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaa 278  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||    
T  29532477 tcctttgtagcaagtctattcagaaagagacgccagacaaaaatgttaacatttaa 29532532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 223 - 350
Target Start/End: Original strand, 74418 - 74545
Alignment:
Q  223 tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa 322  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| ||||| ||||| | ||| |||||| ||||  |||| |||| ||| ||  |||| |    
T  74418 tcctttgtagcaagtctattcagaaagagacgccaaacaaaaatgttaacttttaagggaaccgctttaagccataaaaattgatcaaactctgcagtga 74517  T
Q  323 tgttattgtcaaccgttgttaagtaaga 350  Q
    ||||| |||| |||| ||||||||||||    
T  74518 tgttagtgtccaccgctgttaagtaaga 74545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 223 - 353
Target Start/End: Complemental strand, 58498 - 58368
Alignment:
Q  223 tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaa 322  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||| | ||| |||||| ||||  |||| |||| ||| ||  |||| |    
T  58498 tcctttgtagcaagtctattcagaaagagacgccaaacaaaaatgttaacctttaagggaaccgctttaagccataaaaattgattaaactctgcagtga 58399  T
Q  323 tgttattgtcaaccgttgttaagtaagaata 353  Q
    ||||  |||| |||| |||||| ||||||||    
T  58398 tgttgatgtccaccgctgttaaataagaata 58368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 223 - 314
Target Start/End: Complemental strand, 224828 - 224737
Alignment:
Q  223 tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatc 314  Q
    ||||||||| |||||||||||||||| |||||||| |||||||| ||||||||||||| ||| || ||| ||||  |||| |||||||||||    
T  224828 tcctttgtagcaagtctattcagaaaaagacgccaaacaaaaatgttaacctttaacggaaccgccttaagccataaaaattgatgaaaatc 224737  T

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Target: chr5 (Bit Score: 46; Significance: 5e-17; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 11266145 - 11266218
Alignment:
Q  223 tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgcca 296  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||| | ||| |||||| ||||    
T  11266145 tcctttgtagcaagtctattcagaaagagacgccaaacaaaaatattaacttttaaaggaaccgctttaagcca 11266218  T

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Target: chr5; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 27891818 - 27891891
Alignment:
Q  223 tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgcca 296  Q
    ||||||||  |||||||||||||||||||| ||||||||||||||||||||||||| | ||| |||||| ||||    
T  27891818 tcctttgttgcaagtctattcagaaagagatgccagacaaaaatattaacctttaatggaaccgctttaagcca 27891891  T

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Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 226 - 290
Target Start/End: Original strand, 29322916 - 29322980
Alignment:
Q  226 tttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgcttt 290  Q
    |||||| ||||||||||||||||||||||||| |||||||| |||||||| |||| |||||||||    
T  29322916 tttgtagcaagtctattcagaaagagacgccaaacaaaaatgttaaccttcaacggaactgcttt 29322980  T

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Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 280
Target Start/End: Original strand, 29150424 - 29150481
Alignment:
Q  223 tcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacg 280  Q
    ||||||||| ||||||||||||| || |||| ||| ||||||||||||||||||||||    
T  29150424 tcctttgtagcaagtctattcaggaaaagacaccaaacaaaaatattaacctttaacg 29150481  T

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Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 353
Target Start/End: Complemental strand, 5825077 - 5824941
Alignment:
Q  217 agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcct 316  Q
    |||| |||||||||| |||||| |||||||||||| | ||| |||||||||||||| ||||| |  || |||||| ||||  |||| |||| ||| ||      
T  5825077 agattatcctttgtagcaagtcgattcagaaagagcctccaaacaaaaatattaacttttaaagggaccgctttaagccataaaaattgatcaaactctg 5824978  T
Q  317 cagtaatgttattgtcaaccgttgttaagtaagaata 353  Q
    |||| |  ||| | || ||||||||||||||||||||    
T  5824977 cagtgagattagtatccaccgttgttaagtaagaata 5824941  T

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Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 365
Target Start/End: Complemental strand, 31962775 - 31962632
Alignment:
Q  222 atcctttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagta 321  Q
    |||||||||| |||||||||||||| ||||| |||| ||||| || ||||||||||||| |||  ||||  ||||  |||| |||  |||||| ||||      
T  31962775 atcctttgtagcaagtctattcagatagagatgccaaacaaatatgttaacctttaacggaaccacttttagccataaaaattgagcaaaatcttcagag 31962676  T
Q  322 atgttattgtcaaccgttgttaagtaagaatacgcagattgcac 365  Q
    |||||| |||| || |  ||||| |||||||| || ||||||||    
T  31962675 atgttagtgtccactgccgttaaataagaataagctgattgcac 31962632  T

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Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 275
Target Start/End: Original strand, 8896369 - 8896418
Alignment:
Q  226 tttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctt 275  Q
    |||||| ||||||||||||||||||||||||| ||||  || ||||||||    
T  8896369 tttgtagcaagtctattcagaaagagacgccaaacaactatgttaacctt 8896418  T

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Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 275
Target Start/End: Original strand, 38931892 - 38931941
Alignment:
Q  226 tttgtatcaagtctattcagaaagagacgccagacaaaaatattaacctt 275  Q
    |||||| |||||||||||||||||||| |||| ||||| || ||||||||    
T  38931892 tttgtagcaagtctattcagaaagagatgccaaacaaatatgttaacctt 38931941  T

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Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 6678684 - 6678632
Alignment:
Q  217 agataatcctttgtatcaagtctattcagaaagagacgccagacaaaaatatt 269  Q
    |||| |||||||||| |||||| |||||||||||| | ||| |||||||||||    
T  6678684 agattatcctttgtagcaagtcgattcagaaagagcctccaaacaaaaatatt 6678632  T

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