View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20873_high_29 (Length: 371)
Name: NF20873_high_29
Description: NF20873
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20873_high_29 |
 | |
|
| [»] scaffold0691 (1 HSPs) |
| | |
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Alignment Details
Target: chr3 (Bit Score: 342; Significance: 0; HSPs: 13)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 17 - 362
Target Start/End: Complemental strand, 2838734 - 2838389
Alignment:
| Q |
17 |
cagaaattgtaggatttgaaggcccaagagaagaaatatatggttggttattggagggtgcagttgagcgcacagtcatatcagtggtaggaatgggggg |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
2838734 |
cagaaattgtaggatttgaaggcccaagagaagaaatatatggttggttattggagggtgcagctgagcgcacagtcatatcagtggtaggaatgggggg |
2838635 |
T |
|
| Q |
117 |
tctaggaaaaaccactcttgccaagctagtttttgaaagccaaaaggtaacagcaaactttgattgttatgcttgcgtcacagtttctcaatcatacact |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2838634 |
tctaggaaaaaccactcttgccaagctagtttttgaaagccaaaaggtaacagcaaactttgattgttatgcttgcgtcacagtttctcaatcatacact |
2838535 |
T |
|
| Q |
217 |
gtgagaggtttgttgataaacatgatggagcaattttgtcggggaactgaagaccctcttccacagatgttgcacaaaaaggatgaccagtcactgattg |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2838534 |
gtgagaggtttgttgataaacatgatggagcaattttgtcggggaactgaagaccctcttccacagatgttgcacaaaaaggatgaccagtcactgattg |
2838435 |
T |
|
| Q |
317 |
aagaagtgaggcaatacctccaacataagaggtacttgatattctt |
362 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2838434 |
aagaagtgaggcaatacctccaacataagaggtacttgatattctt |
2838389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 17 - 362
Target Start/End: Original strand, 5412890 - 5413235
Alignment:
| Q |
17 |
cagaaattgtaggatttgaaggcccaagagaagaaatatatggttggttattggagggtgcagttgagcgcacagtcatatcagtggtaggaatgggggg |
116 |
Q |
| |
|
||||| |||||||| ||||||| |||| ||||||| | | ||||||||||||||| ||||||| || || ||||||||||||||||||||||||||||| |
|
|
| T |
5412890 |
cagaagttgtaggaattgaaggtccaaaagaagaattgtctggttggttattggatggtgcagcggaacgtacagtcatatcagtggtaggaatgggggg |
5412989 |
T |
|
| Q |
117 |
tctaggaaaaaccactcttgccaagctagtttttgaaagccaaaaggtaacagcaaactttgattgttatgcttgcgtcacagtttctcaatcatacact |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
5412990 |
cctaggaaaaaccactcttgccaagctagtttttgaaagccaaaaggtatcagcacactttgattgttgtgcttgcgtaacagtttctcaatcatacact |
5413089 |
T |
|
| Q |
217 |
gtgagaggtttgttgataaacatgatggagcaattttgtcggggaactgaagaccctcttccacagatgttgcacaaaaaggatgaccagtcactgattg |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||| |||||||| |||||||||| |
|
|
| T |
5413090 |
gtgagaggtttgttgataaacatgatggagcaattttgtcggggaactgaagactctcttccgcagatgttacacaaaatggatgaccggtcactgatta |
5413189 |
T |
|
| Q |
317 |
aagaagtgaggcaatacctccaacataagaggtacttgatattctt |
362 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
5413190 |
tagaagtgaggcaatacctgcaacataagaggtatttgatattctt |
5413235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 17 - 362
Target Start/End: Complemental strand, 2855944 - 2855599
Alignment:
| Q |
17 |
cagaaattgtaggatttgaaggcccaagagaagaaatatatggttggttattggagggtgcagttgagcgcacagtcatatcagtggtaggaatgggggg |
116 |
Q |
| |
|
||||| ||||||| |||||||||||| ||||||| | | ||||||||||||||| ||| | |||||||| ||| || |||||||| ||||||||||| |
|
|
| T |
2855944 |
cagaagttgtaggcattgaaggcccaaaagaagaattgtctggttggttattggaaggtatatctgagcgcaaagtgatttcagtggtgggaatgggggg |
2855845 |
T |
|
| Q |
117 |
tctaggaaaaaccactcttgccaagctagtttttgaaagccaaaaggtaacagcaaactttgattgttatgcttgcgtcacagtttctcaatcatacact |
216 |
Q |
| |
|
| |||||||||| ||||||||||||||| ||||||| ||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
2855844 |
tataggaaaaactactcttgccaagctaatttttgacagccaaaaggtaacaacaaactttgattgtcgtgcttgcatcacagtttctcaatcatacact |
2855745 |
T |
|
| Q |
217 |
gtgagaggtttgttgataaacatgatggagcaattttgtcggggaactgaagaccctcttccacagatgttgcacaaaaaggatgaccagtcactgattg |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
2855744 |
gtgagaggtttgttgataaacatgatggagcaattttgtcggggaactgaagaccctcttccactgatgttgcacaaaatggatgaccagtcactgatta |
2855645 |
T |
|
| Q |
317 |
aagaagtgaggcaatacctccaacataagaggtacttgatattctt |
362 |
Q |
| |
|
| |||| ||||||||||| |||||||||||||| ||| ||||||| |
|
|
| T |
2855644 |
tacaagtaaggcaatacctgcaacataagaggtatttggtattctt |
2855599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 17 - 362
Target Start/End: Original strand, 2769073 - 2769418
Alignment:
| Q |
17 |
cagaaattgtaggatttgaaggcccaagagaagaaatatatggttggttattggagggtgcagttgagcgcacagtcatatcagtggtaggaatgggggg |
116 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||| |
|
|
| T |
2769073 |
cagaaattgtaggattggaaggcccaagagaagaattatttggttggttattggagggtgcagctaagcgcacagtgatatcagtggtaggaatgggggg |
2769172 |
T |
|
| Q |
117 |
tctaggaaaaaccactcttgccaagctagtttttgaaagccaaaaggtaacagcaaactttgattgttatgcttgcgtcacagtttctcaatcatacact |
216 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
2769173 |
tctaggaaaaaccactcttgccaaactagtttatgacagccaaaaggtaactgcaaactttgattgtcgtgcttgcatcacagtttctcaatcatacact |
2769272 |
T |
|
| Q |
217 |
gtgagaggtttgttgataaacatgatggagcaattttgtcggggaactgaagaccctcttccacagatgttgcacaaaaaggatgaccagtcactgattg |
316 |
Q |
| |
|
|||||||| || ||||||| ||||||||||||||||||| || ||||||||| ||||| | | ||||||| ||||||| ||||||| ||||||| | |
|
|
| T |
2769273 |
gtgagagggttactgataaaaatgatggagcaattttgtcaggaaactgaagaacctctgctaaagatgttacacaaaatggatgacatgtcactggtaa |
2769372 |
T |
|
| Q |
317 |
aagaagtgaggcaatacctccaacataagaggtacttgatattctt |
362 |
Q |
| |
|
||| || ||| ||||||| |||||||||||||| ||||||||||| |
|
|
| T |
2769373 |
tagaggtaaggaaatacctacaacataagaggtatttgatattctt |
2769418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 18 - 362
Target Start/End: Original strand, 2807272 - 2807616
Alignment:
| Q |
18 |
agaaattgtaggatttgaaggcccaagagaagaaatatatggttggttattggagggtgcagttgagcgcacagtcatatcagtggtaggaatggggggt |
117 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| | || ||||||||||||||||| || ||||||||| || || || |||||||||||||| ||| |
|
|
| T |
2807272 |
agaaattgtaggatttgaattcccaagagaagaaatgtctgtttggttattggagggtgtagctgagcgcacggtgatttcggtggtaggaatgggaggt |
2807371 |
T |
|
| Q |
118 |
ctaggaaaaaccactcttgccaagctagtttttgaaagccaaaaggtaacagcaaactttgattgttatgcttgcgtcacagtttctcaatcatacactg |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||| ||||||| || ||||||||||| ||||||| || ||||||||||||||||||||| |
|
|
| T |
2807372 |
ctaggaaaaaccactcttgccaagctagtttttgatagccaaacggtaacaacacactttgattgtcgtgcttgcatcgcagtttctcaatcatacactg |
2807471 |
T |
|
| Q |
218 |
tgagaggtttgttgataaacatgatggagcaattttgtcggggaactgaagaccctcttccacagatgttgcacaaaaaggatgaccagtcactgattga |
317 |
Q |
| |
|
||||||| ||| ||||||||||||||||||||||||||| || ||||||||||||||||||| | | ||| | |||| ||||||| | |||||||||| |
|
|
| T |
2807472 |
tgagagggttgatgataaacatgatggagcaattttgtcaggaaactgaagaccctcttccaaataagttacgcaaattggatgacaaatcactgattgt |
2807571 |
T |
|
| Q |
318 |
agaagtgaggcaatacctccaacataagaggtacttgatattctt |
362 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
2807572 |
agaagtgaggcaatacctgcaacataagaggtatttgatattctt |
2807616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 32 - 362
Target Start/End: Original strand, 2749014 - 2749344
Alignment:
| Q |
32 |
ttgaaggcccaagagaagaaatatatggttggttattggagggtgcagttgagcgcacagtcatatcagtggtaggaatggggggtctaggaaaaaccac |
131 |
Q |
| |
|
|||||| ||||| ||||||| | | ||||||||||||||| |||| || ||||||||| || ||||| |||||||||||||| || |||||||||||||| |
|
|
| T |
2749014 |
ttgaagtcccaaaagaagaactgtctggttggttattggatggtgaagctgagcgcacggtgatatccgtggtaggaatgggaggcctaggaaaaaccac |
2749113 |
T |
|
| Q |
132 |
tcttgccaagctagtttttgaaagccaaaaggtaacagcaaactttgattgttatgcttgcgtcacagtttctcaatcatacactgtgagaggtttgttg |
231 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
2749114 |
tcttgccaagctagtttttgaaagcaaaaaggtatcagcacactttgattgtcgtgcttgcgtcacagtttctcaatcttacactgtgagaggtttgttg |
2749213 |
T |
|
| Q |
232 |
ataaacatgatggagcaattttgtcggggaactgaagaccctcttccacagatgttgcacaaaaaggatgaccagtcactgattgaagaagtgaggcaat |
331 |
Q |
| |
|
|||||||||||||||||||| |||||| | ||| ||||| |||||| |||||||| ||||||| ||||||||||||||| ||| |||||||||||||| |
|
|
| T |
2749214 |
ataaacatgatggagcaattctgtcggagtactaaagactctcttctgcagatgttacacaaaatggatgaccagtcactaattatagaagtgaggcaat |
2749313 |
T |
|
| Q |
332 |
acctccaacataagaggtacttgatattctt |
362 |
Q |
| |
|
|||| |||||||||||||| ||||||||||| |
|
|
| T |
2749314 |
acctgcaacataagaggtatttgatattctt |
2749344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 17 - 362
Target Start/End: Original strand, 2759218 - 2759563
Alignment:
| Q |
17 |
cagaaattgtaggatttgaaggcccaagagaagaaatatatggttggttattggagggtgcagttgagcgcacagtcatatcagtggtaggaatgggggg |
116 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||| ||| |||||||| || |||||||||||||||||||| |
|
|
| T |
2759218 |
cagaaattgtaggatttgaaggcccaaaagaagaactatatggttggttattggagggttcagctgaacgcacagtgatttcagtggtaggaatgggggg |
2759317 |
T |
|
| Q |
117 |
tctaggaaaaaccactcttgccaagctagtttttgaaagccaaaaggtaacagcaaactttgattgttatgcttgcgtcacagtttctcaatcatacact |
216 |
Q |
| |
|
||| || ||||||||||||||||||||||||||||| ||||||||||||||| || | ||||||||| | |||||| || ||||||||||||||||||| |
|
|
| T |
2759318 |
tctcggcaaaaccactcttgccaagctagtttttgacagccaaaaggtaacaacacagtttgattgtcaagcttgcatcgtagtttctcaatcatacact |
2759417 |
T |
|
| Q |
217 |
gtgagaggtttgttgataaacatgatggagcaattttgtcggggaactgaagaccctcttccacagatgttgcacaaaaaggatgaccagtcactgattg |
316 |
Q |
| |
|
|||||||| || ||||||| ||||||| ||||||||||| || ||||||||||||||||||| ||| ||| ||||||| ||||||| |||||||||| |
|
|
| T |
2759418 |
gtgagaggattactgataaaaatgatggcgcaattttgtcaggaaactgaagaccctcttccaaagaagttacacaaaatggatgacaggtcactgatta |
2759517 |
T |
|
| Q |
317 |
aagaagtgaggcaatacctccaacataagaggtacttgatattctt |
362 |
Q |
| |
|
||| || ||| ||||||| ||||||||||||| ||||||||||| |
|
|
| T |
2759518 |
cagaggtaaggaaatacctagaacataagaggtatttgatattctt |
2759563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 17 - 362
Target Start/End: Original strand, 2818561 - 2818906
Alignment:
| Q |
17 |
cagaaattgtaggatttgaaggcccaagagaagaaatatatggttggttattggagggtgcagttgagcgcacagtcatatcagtggtaggaatgggggg |
116 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
2818561 |
cagaaatcgtaggatttgaaggcccgagagaagaactatatggttggttattggagggtgcagccgagcgcacagtgatatcagtggtaggaatgggggg |
2818660 |
T |
|
| Q |
117 |
tctaggaaaaaccactcttgccaagctagtttttgaaagccaaaaggtaacagcaaactttgattgttatgcttgcgtcacagtttctcaatcatacact |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||| || | ||||||||| |||||| || ||||||||||||||||||| |
|
|
| T |
2818661 |
tctaggaaaaaccactcttgccaagctagtttttgacagccaaaaggtaacaacacagtttgattgtcgagcttgcatcgtagtttctcaatcatacact |
2818760 |
T |
|
| Q |
217 |
gtgagaggtttgttgataaacatgatggagcaattttgtcggggaactgaagaccctcttccacagatgttgcacaaaaaggatgaccagtcactgattg |
316 |
Q |
| |
|
|||||||| || ||||||| |||||||||||||||| || || | ||||||||||| || | |||| || | ||||| ||||||| || ||||||| |
|
|
| T |
2818761 |
gtgagaggattactgataaaaatgatggagcaattttatcaggaagctgaagaccctgatctagagattttacgcaaaatggatgacaggttactgatta |
2818860 |
T |
|
| Q |
317 |
aagaagtgaggcaatacctccaacataagaggtacttgatattctt |
362 |
Q |
| |
|
||| || ||| ||||||| ||||||||||||| || |||||||| |
|
|
| T |
2818861 |
tagaggtaaggaaatacctagaacataagaggtatttaatattctt |
2818906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 21 - 362
Target Start/End: Original strand, 2797369 - 2797710
Alignment:
| Q |
21 |
aattgtaggatttgaaggcccaagagaagaaatatatggttggttattggagggtgcagttgagcgcacagtcatatcagtggtaggaatggggggtcta |
120 |
Q |
| |
|
|||||| |||||||||||||| || |||||| | | |||||||||| | ||||| ||| |||||||||||| || |||||||| |||||||| |||||| |
|
|
| T |
2797369 |
aattgtcggatttgaaggcccgagggaagaattgtctggttggttactagagggcacagctgagcgcacagtgatttcagtggttggaatgggaggtcta |
2797468 |
T |
|
| Q |
121 |
ggaaaaaccactcttgccaagctagtttttgaaagccaaaaggtaacagcaaactttgattgttatgcttgcgtcacagtttctcaatcatacactgtga |
220 |
Q |
| |
|
||||||||||||||||||||||||||||| || || |||||||||||| |||| ||||||||| ||||||| |||||||||||||||||||||| |||| |
|
|
| T |
2797469 |
ggaaaaaccactcttgccaagctagttttcgacagtcaaaaggtaacaacaaaatttgattgtcgtgcttgcatcacagtttctcaatcatacaccgtga |
2797568 |
T |
|
| Q |
221 |
gaggtttgttgataaacatgatggagcaattttgtcggggaactgaagaccctcttccacagatgttgcacaaaaaggatgaccagtcactgattgaaga |
320 |
Q |
| |
|
| || | ||||| |||||||||||| |||||||| | | ||||||| ||||||| |||||||| ||||||| ||||||| ||||| ||||| | | |
|
|
| T |
2797569 |
gggggatattgatcaacatgatggaggaattttgtagcgaaactgaaagccctcttttgcagatgttacacaaaatggatgacaagtcattgattataca |
2797668 |
T |
|
| Q |
321 |
agtgaggcaatacctccaacataagaggtacttgatattctt |
362 |
Q |
| |
|
||||||||||||||| |||||||| | ||| ||||||||||| |
|
|
| T |
2797669 |
agtgaggcaatacctgcaacataaaaagtatttgatattctt |
2797710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 21 - 137
Target Start/End: Original strand, 2790375 - 2790491
Alignment:
| Q |
21 |
aattgtaggatttgaaggcccaagagaagaaatatatggttggttattggagggtgcagttgagcgcacagtcatatcagtggtaggaatggggggtcta |
120 |
Q |
| |
|
|||||| |||||||||||||| || |||||| | | |||||||||||||||||| ||| |||||||||||| || |||||||| |||||||| |||||| |
|
|
| T |
2790375 |
aattgtcggatttgaaggcccgagggaagaattgtctggttggttattggagggcacagctgagcgcacagtgatttcagtggttggaatgggaggtcta |
2790474 |
T |
|
| Q |
121 |
ggaaaaaccactcttgc |
137 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
2790475 |
ggaaaaaccactcttgc |
2790491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 186 - 365
Target Start/End: Original strand, 2790493 - 2790672
Alignment:
| Q |
186 |
tgcttgcgtcacagtttctcaatcatacactgtgagaggtttgttgataaacatgatggagcaattttgtcggggaactgaagaccctcttccacagatg |
285 |
Q |
| |
|
||||||| |||| ||||||||||||| ||| ||||| || | ||||| |||||||||||| |||||||| | | |||||||| ||||||| |||||| |
|
|
| T |
2790493 |
tgcttgcatcaccgtttctcaatcattcaccgtgagggggatattgatcaacatgatggaggaattttgtagcgaaactgaaggccctcttttgcagatg |
2790592 |
T |
|
| Q |
286 |
ttgcacaaaaaggatgaccagtcactgattgaagaagtgaggcaatacctccaacataagaggtacttgatattcttcga |
365 |
Q |
| |
|
|| ||||||| ||||||| ||||||| ||| | |||||||||||||||| ||||||| | ||| |||||||||||||| |
|
|
| T |
2790593 |
ttacacaaaatggatgacaagtcactcattctacaagtgaggcaatacctgaaacataaaaagtatttgatattcttcga |
2790672 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 82 - 139
Target Start/End: Complemental strand, 22648590 - 22648533
Alignment:
| Q |
82 |
gagcgcacagtcatatcagtggtaggaatggggggtctaggaaaaaccactcttgcca |
139 |
Q |
| |
|
|||||||| ||||| || |||||||| ||||| || |||||||||||||||||||||| |
|
|
| T |
22648590 |
gagcgcactgtcatctctgtggtaggtatgggagggctaggaaaaaccactcttgcca |
22648533 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 21945676 - 21945728
Alignment:
| Q |
100 |
gtggtaggaatggggggtctaggaaaaaccactcttgccaagctagtttttga |
152 |
Q |
| |
|
|||||||||||||| || | ||||||||||||||| |||||| ||||||||| |
|
|
| T |
21945676 |
gtggtaggaatgggagggcaaggaaaaaccactctagccaagaaagtttttga |
21945728 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0691 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: scaffold0691
Description:
Target: scaffold0691; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 23 - 362
Target Start/End: Complemental strand, 6280 - 5941
Alignment:
| Q |
23 |
ttgtaggatttgaaggcccaagagaagaaatatatggttggttattggagggtgcagttgagcgcacagtcatatcagtggtaggaatggggggtctagg |
122 |
Q |
| |
|
|||||||||| |||||||||||||| ||| |||||||||||||||||||| || ||| ||||||||| || || ||||||||||||||||| ||| |||| |
|
|
| T |
6280 |
ttgtaggattcgaaggcccaagagaggaattatatggttggttattggagagtccagctgagcgcaccgtaatttcagtggtaggaatgggaggtatagg |
6181 |
T |
|
| Q |
123 |
aaaaaccactcttgccaagctagtttttgaaagccaaaaggtaacagcaaactttgattgttatgcttgcgtcacagtttctcaatcatacactgtgaga |
222 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||| || | ||||||||| ||||||| || ||||||||||| ||||||| |||||| |
|
|
| T |
6180 |
gaaaaccactcttgccaagctagtttttgacagccaaaaggtaacaacacaatttgattgtcgtgcttgcatcgcagtttctcaaacatacaccgtgaga |
6081 |
T |
|
| Q |
223 |
ggtttgttgataaacatgatggagcaattttgtcggggaactgaagaccctcttccacagatgttgcacaaaaaggatgaccagtcactgattgaagaag |
322 |
Q |
| |
|
|| || | |||||||||||||||||||||||||||| |||||||||||||||||| || ||||| ||||||| ||||||| ||||| | ||| ||||| |
|
|
| T |
6080 |
gggttactcataaacatgatggagcaattttgtcgggaaactgaagaccctcttccgcaaatgttacacaaaatggatgacaagtcattaattatagaag |
5981 |
T |
|
| Q |
323 |
tgaggcaatacctccaacataagaggtacttgatattctt |
362 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
5980 |
tgaggcaatacctgcaacataagaggtatttgatattctt |
5941 |
T |
|
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