View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20873_low_3 (Length: 650)
Name: NF20873_low_3
Description: NF20873
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20873_low_3 |
 | |
|
| [»] scaffold0257 (1 HSPs) |
| | |
|
| [»] scaffold1416 (1 HSPs) |
| | |
|
| [»] scaffold0329 (1 HSPs) |
| | |
|
| [»] scaffold0014 (1 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 611; Significance: 0; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 611; E-Value: 0
Query Start/End: Original strand, 1 - 634
Target Start/End: Original strand, 9802505 - 9803139
Alignment:
| Q |
1 |
gtggagagtggttttgatgtgtttaaattcagaaagtgaattgcctgctagaatgattttatctacatagacaagcagtattgtgtatgaagaagatgaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9802505 |
gtggagagtggttttgatgtgtttaaattcagaaagtgaattgcctgctagaatgattttatctacatagacaagcagtattgtgtatgaagaagatgaa |
9802604 |
T |
|
| Q |
101 |
aatttggtgaatagagagtgatctgaatttgcttgcttgaaaccttgagccacaagtaatgaagtgagcttctcataccactttctgctagcttgcttta |
200 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9802605 |
aatttggtgaatagagagtgatatgaatttgcttgcttgaaaccttgagccacaagtaatgaagtgagcttctcataccactttctgctagcttgcttta |
9802704 |
T |
|
| Q |
201 |
atccatagagagatttaatcagtttgcaaacttgatttggtttggatgttttaacacctggaggaagttacatgtacacattttcttgcaagtcgccatg |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9802705 |
atccatagagagatttaatcagtttgcaaacttgatttggtttggatgttttaacacctggaggaagttacatgtacacattttcttgcaagtcgccatg |
9802804 |
T |
|
| Q |
301 |
aagaaaagcattattgacatattgatggataaaccaatggtgaatggatgccaaagcaataatgagtatgacagtcgtaagcttagctacaggtgagtat |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
9802805 |
aagaaaagcattattgacatattgatggataaaccaatggtgaatggatgccaaagcaataatgagtatgacagtcgtaagcttagctacaagtgagtat |
9802904 |
T |
|
| Q |
401 |
gtgtcctagtaattcaaaccttcaatctgattgtatccc-ttagcaaccaaacgtgctttgaatctttctatggaaccatctgcatgatgtttaatcttg |
499 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9802905 |
gtgtcctagtaattcaaaccttcaatctgattgtatccctttagcaaccaaacgtgctttgaatctttctatggaaccatctgcatgatgtttaatcttg |
9803004 |
T |
|
| Q |
500 |
taaacccatatgcagcctattggtttgatgtttggaggtaaatcaacaagtttttaagtaccagtttgttcaagagctgtaagttcggtctccatggctt |
599 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |
|
|
| T |
9803005 |
taaacccatatgcagcctattggtttgatgtttggaggtaaatcaacaagtttttaagtaccagtttgttcaagagctgtaagttcagtctccatagctt |
9803104 |
T |
|
| Q |
600 |
tattcaaacaatcaaattttctagcctcaacatat |
634 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
9803105 |
tattcaaacaatcaaattttctagcctcaacatat |
9803139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 25 - 628
Target Start/End: Original strand, 37737529 - 37738135
Alignment:
| Q |
25 |
aaattcagaaagtgaattgcctgctagaatgattttatctacatagacaagcagtattgtgtatgaagaagatgaaaatttggtgaatagagagtgatct |
124 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||| | ||| ||||| ||||| || || ||| ||| || |||||| |||||||||||| || |||||| |
|
|
| T |
37737529 |
aaattcagaaagtgaattccctgcaagaatgatatcatccacatatacaagaagaatagtgaatgttgaggatgaagatttggtgaataaggaatgatct |
37737628 |
T |
|
| Q |
125 |
gaatttgcttgcttgaaaccttgagccacaagtaatgaagtgagcttctcataccactttctgctagcttgctttaatccatagagagatttaatcagtt |
224 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| || || | || ||||||||||| |||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
37737629 |
gaattagcttgcttgaaaccttgagccacaagtaaagatgtcaatttttcataccacttcatgcttgcttgctttaatccatagagggatttaatcagtt |
37737728 |
T |
|
| Q |
225 |
tgcaaacttgatttggtttggatgttttaacacctggaggaagttacatgtacacattttcttgcaagtcgccatgaagaaaagcattattgacata--- |
321 |
Q |
| |
|
|||| || ||||||||||| || | ||| |||||||| || |||| |||||||||||||||||| || || ||||||||||||||||||||||||| |
|
|
| T |
37737729 |
tgcatacctgatttggtttagaggatttgacacctggtgggagttgcatgtacacattttcttgtaactccccatgaagaaaagcattattgacatcaag |
37737828 |
T |
|
| Q |
322 |
ttgatggataaaccaatggtgaatggatgccaaagcaataatgagtatgacagtcgtaagcttagctacaggtgagtatgtgtcctagtaattcaaacct |
421 |
Q |
| |
|
||| || ||||||||||| ||||| ||||| || || ||||||||| ||||||| |||||||| ||||||||||||||||| || |||| | ||||| |
|
|
| T |
37737829 |
ttggtgaataaaccaatgatgaatagatgctaatgctataatgagtctgacagttgtaagctttgctacaggtgagtatgtatcaaagtagtctaaaccc |
37737928 |
T |
|
| Q |
422 |
tcaatctgattgtatcccttagcaaccaaacgtgctttgaatctttctatggaaccatctgcatgatgtttaatcttgtaaacccatatgcagcctattg |
521 |
Q |
| |
|
||||| |||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||| |||||||||||| |
|
|
| T |
37737929 |
tcaatttgattgtatcccttagcaactaaacatgctttgaatctttctatggatccatctgcatgatgtttgatcttataaacccatctgcagcctattg |
37738028 |
T |
|
| Q |
522 |
gtttgatgtttggaggtaaatcaacaagtttttaagtaccagtttgttcaagagctgtaagttcggtctccatggctttattcaaacaatcaaattttct |
621 |
Q |
| |
|
|||||||||| |||||||||||||| | ||| |||||||||||||||||||||| | |||||| |||| |||||| || ||| |||| ||||| || || |
|
|
| T |
37738029 |
gtttgatgttaggaggtaaatcaaccaatttccaagtaccagtttgttcaagagcagcaagttcagtcttcatggccttgttccaacagtcaaacttact |
37738128 |
T |
|
| Q |
622 |
agcctca |
628 |
Q |
| |
|
|||||| |
|
|
| T |
37738129 |
ggcctca |
37738135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 13 - 624
Target Start/End: Complemental strand, 26215132 - 26214519
Alignment:
| Q |
13 |
tttgatgtgtttaaattcagaaagtgaattgcctgctagaatgattttatctacatagacaagcagtattgtgtatgaagaagatgaaaatttggtgaat |
112 |
Q |
| |
|
|||||||| ||||| ||||| | |||||||||||||| ||| || | ||||||||| || | || || ||| ||| || || ||| ||||||| || |
|
|
| T |
26215132 |
tttgatgttgttaaactcagataatgaattgcctgctaaaataatatcatctacataaaccaaaaggatagtgaatgcagtagctgatgatttggtaaag |
26215033 |
T |
|
| Q |
113 |
agagagtgatctgaatttgcttgcttgaaaccttgagccacaagtaatgaagtgagcttctcataccactttctgctagcttgctttaatccatagagag |
212 |
Q |
| |
|
|| || |||||||| || || |||||| |||||||||||| | || || |||||| | |||||||| ||||| |||||||| ||||||||||| | |
|
|
| T |
26215032 |
agtgaatgatctgagttagcatgcttgtaaccttgagccagtaacaaagaggtgagcctttcataccattttctagaggcttgcttcaatccatagaggg |
26214933 |
T |
|
| Q |
213 |
atttaatcagtttgcaaacttgatttggtttggatgttttaacacctggaggaagttacatgtacacattttcttgcaagtcgccatgaagaaaagcatt |
312 |
Q |
| |
|
|||| | || ||| ||||||||||| ||||| ||||| | | ||| || || | | |||||| | |||||||||||| || ||||| ||||||||||| |
|
|
| T |
26214932 |
attttaccaatttacaaacttgattaggtttagatgtagtgataccaggtggtaactgcatgtagaaattttcttgcaattcaccatgcagaaaagcatt |
26214833 |
T |
|
| Q |
313 |
attgacata---ttgatggataaaccaatggtgaatggatgccaaagcaataatgagtatgacagtcgtaagcttagctacaggtgagtatgtgtcctag |
409 |
Q |
| |
|
|| |||| ||| || || || ||||| ||||| ||||| |||||||||| ||| | || || |||||| |||| ||||||||||||||||| || |
|
|
| T |
26214832 |
gttaacatcaagttggtgtatgaatcaatgatgaattgatgctaaagcaataacaagtctcactgtagtaagcatagcaacaggtgagtatgtgtcaaag |
26214733 |
T |
|
| Q |
410 |
taattcaaaccttcaatctgattgtatcccttagcaaccaaacgtgctttgaatctttctatggaaccatctgcatgatgtttaatcttgtaaacccata |
509 |
Q |
| |
|
||||| || |||| ||||| ||||| ||||| |||| || |||||||| || | || |||||| ||||| |||||||||||||||| || ||||||| |
|
|
| T |
26214732 |
taatttaa-ccttatatctggttgtaaccctttgcaaataagcgtgctttaaaccattttatggatccatcaacatgatgtttaatcttatatacccata |
26214634 |
T |
|
| Q |
510 |
tgcagcctattggtttgatgtttggaggtaaatcaacaagtttttaagtaccagtttgttcaagagctgtaagttcggtctccatggctttattcaaaca |
609 |
Q |
| |
|
||||||| || |||||| |||||||||| |||||||| ||| ||||| ||||||||| ||| ||| |||||||| ||||||||||| |||||| |||| |
|
|
| T |
26214633 |
tgcagccaatatgtttgacatttggaggtagatcaacaattttctaagttccagtttgtacaatagcagtaagttcagtctccatggccttattccaaca |
26214534 |
T |
|
| Q |
610 |
atcaaattttctagc |
624 |
Q |
| |
|
||||||||| ||||| |
|
|
| T |
26214533 |
atcaaatttactagc |
26214519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 443 - 633
Target Start/End: Complemental strand, 6531858 - 6531669
Alignment:
| Q |
443 |
gcaaccaaacgtgctttgaatctttctatggaaccatctgcatgatgtttaatcttgtaaacccatatgcagcctattggtttgatgtttggaggtaaat |
542 |
Q |
| |
|
||||| |||||||||||||| ||||||||||| |||||||||||||| | |||||| |||||||||||||| || |||||| || |||| |||||||| | |
|
|
| T |
6531858 |
gcaactaaacgtgctttgaacctttctatggatccatctgcatgatgct-aatcttataaacccatatgcatccaattggtgtggtgttgggaggtaagt |
6531760 |
T |
|
| Q |
543 |
caacaagtttttaagtaccagtttgttcaagagctgtaagttcggtctccatggctttattcaaacaatcaaattttctagcctcaacata |
633 |
Q |
| |
|
|||||||||| | || ||||||||| ||||||| | |||||| |||||||||||||| ||| |||| |||||||| ||||| ||| |||| |
|
|
| T |
6531759 |
caacaagtttccatgttccagtttgtacaagagcagcaagttcagtctccatggctttcttccaacagtcaaatttactagcttcagcata |
6531669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 503 - 634
Target Start/End: Complemental strand, 25126406 - 25126275
Alignment:
| Q |
503 |
acccatatgcagcctattggtttgatgtttggaggtaaatcaacaagtttttaagtaccagtttgttcaagagctgtaagttcggtctccatggctttat |
602 |
Q |
| |
|
|||||| || |||||||||||||||||||||||||||| ||||||||||| ||||| | ||||||||||||| | | |||| | || ||||||||||| |
|
|
| T |
25126406 |
acccatctggagcctattggtttgatgtttggaggtaagtcaacaagtttctaagtccttgtttgttcaagagaagcatgttcagacttcatggctttat |
25126307 |
T |
|
| Q |
603 |
tcaaacaatcaaattttctagcctcaacatat |
634 |
Q |
| |
|
|| ||||||||||||| ||||||||||||||| |
|
|
| T |
25126306 |
tccaacaatcaaatttactagcctcaacatat |
25126275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 164 - 243
Target Start/End: Complemental strand, 14457015 - 14456936
Alignment:
| Q |
164 |
gtgagcttctcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaacttgatttggttt |
243 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| | ||||| ||| |||| | || ||||||||||| |||||||| |
|
|
| T |
14457015 |
gtgagcttctcataccattttctgctagcttgcttgaggccataaagaaatttcagaagcttgcaaacttggtttggttt |
14456936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 422 - 577
Target Start/End: Complemental strand, 52778876 - 52778721
Alignment:
| Q |
422 |
tcaatctgattgtatcccttagcaaccaaacgtgctttgaatctttctatggaaccatctgcatgatgtttaatcttgtaaacccatatgcagcctattg |
521 |
Q |
| |
|
|||||||||||||| ||||| ||||| || | |||||| |||||| ||||||||||| ||||||| ||||| || |||| |||| | || || || | |
|
|
| T |
52778876 |
tcaatctgattgtaaccctttgcaactaatctggctttgtgtctttcaatggaaccatcagcatgatatttaactttataaatccatctacatccaatgg |
52778777 |
T |
|
| Q |
522 |
gtttgatgtttggaggtaaatcaacaagtttttaagtaccagtttgttcaagagct |
577 |
Q |
| |
|
||||||| || | |||||||||||||||| | |||||||||| ||||||||| |
|
|
| T |
52778776 |
gtttgatattggatggtaaatcaacaagttgccaggtaccagttttctcaagagct |
52778721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 9795922 - 9795996
Alignment:
| Q |
169 |
cttctcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaacttgatttggttt |
243 |
Q |
| |
|
|||||||||||| ||||| |||||||| || || ||||| |||||||| | || |||||||||||||||||||| |
|
|
| T |
9795922 |
cttctcataccattttctactagcttgtttcaaaccatatagagatttcagtagcttgcaaacttgatttggttt |
9795996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 395; Significance: 0; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 9 - 634
Target Start/End: Original strand, 18551270 - 18551897
Alignment:
| Q |
9 |
tggttttgatgtgtttaaattcagaaagtgaattgcctgctagaatgattttatctacatagacaagcagtattgtgtatgaagaagatgaaaatttggt |
108 |
Q |
| |
|
|||||||||||| || |||||||||||||||||| |||||||| ||||| | ||||||||||||||| | ||| ||| ||||||||||||| |||| || |
|
|
| T |
18551270 |
tggttttgatgttttcaaattcagaaagtgaatttcctgctaggatgatatcatctacatagacaagaattatggtgaatgaagaagatgaggattttgt |
18551369 |
T |
|
| Q |
109 |
gaatagagagtgatctgaatttgcttgcttgaaaccttgagccacaagtaatgaagtgagcttctcataccactttctgctagcttgctttaatccatag |
208 |
Q |
| |
|
||| ||||| |||||||||||| ||||||||||||||||||||| ||||||||| |||||| |||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
18551370 |
gaagagagaatgatctgaattttcttgcttgaaaccttgagccataagtaatgaggtgagcatctcatgccactttctgctagcttgctttaatccatag |
18551469 |
T |
|
| Q |
209 |
agagatttaatcagtttgcaaacttgatttggtttggatgttttaacacctggaggaagttacatgtacacattttcttgcaagtcgccatgaagaaaag |
308 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| || |||||||| |||| |
|
|
| T |
18551470 |
agagatttaatcagtttacaaacttgatttggtttggatgatttaacacctggaggaagttgcatgtacacattttcttgcaattcaccatgaaggaaag |
18551569 |
T |
|
| Q |
309 |
cattattgacat---attgatggataaaccaatggtgaatggatgccaaagcaataatgagtatgacagtcgtaagcttagctacaggtgagtatgtgtc |
405 |
Q |
| |
|
|||||||||||| |||||| |||||||||| |||||| ||||||||||||||||||||| ||||||| || | ||||||||||||||| |||||||| |
|
|
| T |
18551570 |
cattattgacatcaagttgatgaataaaccaattgtgaatagatgccaaagcaataatgagtctgacagtggt-atcttagctacaggtgaatatgtgtc |
18551668 |
T |
|
| Q |
406 |
ctagtaattcaaaccttcaatctgattgtatcccttagcaaccaaacgtgctttgaatctttctatggaaccatctgcatgatgtttaatcttgtaaacc |
505 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
18551669 |
aaagtaagagaaaccttcaatctgattatatcccttagcaaccaaacatgctttgaatctttctatggaaccatctgcatgatgtttaatcttgtaatcc |
18551768 |
T |
|
| Q |
506 |
catatgcagcctattggtttgatgtttggaggtaaatcaacaagtttttaagtaccagtttgttcaagagctgtaagttcggtctccatggctttattca |
605 |
Q |
| |
|
||| ||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||| || ||||||||||||||| |
|
|
| T |
18551769 |
catctgcagcctattagtttgatgtttggaggtaaaccaacaagtttccaagtaccagtttgttcaagagctttaagttcagtgtccatggctttattcc |
18551868 |
T |
|
| Q |
606 |
aacaatcaaattttctagcctcaacatat |
634 |
Q |
| |
|
|||||||||| || ||||||||||||||| |
|
|
| T |
18551869 |
aacaatcaaacttgctagcctcaacatat |
18551897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 422 - 576
Target Start/End: Complemental strand, 15758342 - 15758188
Alignment:
| Q |
422 |
tcaatctgattgtatcccttagcaaccaaacgtgctttgaatctttctatggaaccatctgcatgatgtttaatcttgtaaacccatatgcagcctattg |
521 |
Q |
| |
|
||||| ||||| || ||||| || ||||||||||||||| ||||||| ||||||||||| ||| || || || || ||| |||| |||| ||||| | |
|
|
| T |
15758342 |
tcaatttgattatagcccttggccaccaaacgtgctttgtatctttcaatggaaccatcaacattgtgctttattttaaaaatccatctgcaccctatag |
15758243 |
T |
|
| Q |
522 |
gtttgatgtttggaggtaaatcaacaagtttttaagtaccagtttgttcaagagc |
576 |
Q |
| |
|
|||||| ||||||||||||||||| ||| |||| ||||||||||||||||| |
|
|
| T |
15758242 |
gtttgactgctggaggtaaatcaacaattttccaagtgccagtttgttcaagagc |
15758188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 15886229 - 15886303
Alignment:
| Q |
169 |
cttctcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaacttgatttggttt |
243 |
Q |
| |
|
|||||||||||||||||| || || |||||||| ||||| | || |||| |||||| ||||||||||| ||||| |
|
|
| T |
15886229 |
cttctcataccactttctactggcctgctttaaaccatataatgacttaagcagtttacaaacttgattgggttt |
15886303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 44230464 - 44230396
Alignment:
| Q |
169 |
cttctcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaacttgatt |
237 |
Q |
| |
|
|||||||||||| ||||| || ||||| || || ||||| | |||||||| ||||||||| |||||||| |
|
|
| T |
44230464 |
cttctcataccattttctacttgcttgtttgaaaccatacaaagatttaagcagtttgcagacttgatt |
44230396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 335; Significance: 0; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 1 - 634
Target Start/End: Original strand, 19813396 - 19814032
Alignment:
| Q |
1 |
gtggagagtggttttgatgtgtttaaattcagaaagtgaattgcctgctagaatgattttatctacatagacaagcagtattgtgtatgaagaagatgaa |
100 |
Q |
| |
|
||||||| |||||||||||| || |||||||||||||||||||| ||||| ||||| | ||||||||| ||||| || | ||| || |||| ||||| |
|
|
| T |
19813396 |
gtggagaatggttttgatgttttcaaattcagaaagtgaattgcttgctaagatgatatcatctacatatacaaggagaactgtaaattaagaggatgat |
19813495 |
T |
|
| Q |
101 |
aatttggtgaatagagagtgatctgaatttgcttgcttgaaaccttgagccacaagtaatgaagtgagcttctcataccactttctgctagcttgcttta |
200 |
Q |
| |
|
|||| |||||||| || |||| ||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| | |
|
|
| T |
19813496 |
gatttagtgaatagggaatgattagaatttgtctgcttgaaaccttgagccacaagtaatgaagtaagcttttcataccactttctgctagcttgcttca |
19813595 |
T |
|
| Q |
201 |
atccatagagagatttaatcagtttgcaaacttgatttggtttggatgttttaacacctggaggaagttacatgtacacattttcttgcaagtcgccatg |
300 |
Q |
| |
|
|||||||||||||||| || ||||| |||||||||||||||||||| |||||||||||||||||||||| ||| |||||||| |||||||| || ||||| |
|
|
| T |
19813596 |
atccatagagagattttattagtttacaaacttgatttggtttggaggttttaacacctggaggaagttgcatatacacattctcttgcaattcaccatg |
19813695 |
T |
|
| Q |
301 |
aagaaaagcattattgacata---ttgatggataaaccaatggtgaatggatgccaaagcaataatgagtatgacagtcgtaagcttagctacaggtgag |
397 |
Q |
| |
|
||| |||||||||||||||| ||| || || |||||||| | |||||| |||||||||||||||||| ||||||| ||||| |||||||||||||| |
|
|
| T |
19813696 |
aaggaaagcattattgacatcaagttggtgaatgaaccaatgattaatggaggccaaagcaataatgagtctgacagttgtaagtttagctacaggtgaa |
19813795 |
T |
|
| Q |
398 |
tatgtgtcctagtaattcaaaccttcaatctgattgtatcccttagcaaccaaacgtgctttgaatctttctatggaaccatctgcatgatgtttaatct |
497 |
Q |
| |
|
|||||||| | |||| |||||| ||||||||||| |||||||||| ||| |||||||||||||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
19813796 |
tatgtgtcaaaataatccaaaccctcaatctgattatatcccttagaaactaaacgtgctttgaatctttcaatggatccatctgcatgatgtttaatct |
19813895 |
T |
|
| Q |
498 |
tgtaaacccatatgcagcctattggtttgatgtttggaggtaaatcaacaagtttttaagtaccagtttgttcaagagctgtaagttcggtctccatggc |
597 |
Q |
| |
|
||||||||||| || |||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||| |||||| || |||||||| || |
|
|
| T |
19813896 |
tgtaaacccatctgtagcctattggtttgatgtttggaggtaagtcaacaagtttccaagtactagtttgttcaagagttgtaagctcagtctccatagc |
19813995 |
T |
|
| Q |
598 |
tttattcaaacaatcaaattttctagcctcaacatat |
634 |
Q |
| |
|
||||||| |||||||||| || ||||||||||||||| |
|
|
| T |
19813996 |
tttattccaacaatcaaacttgctagcctcaacatat |
19814032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 25 - 628
Target Start/End: Complemental strand, 3004893 - 3004309
Alignment:
| Q |
25 |
aaattcagaaagtgaattgcctgctagaatgattttatctacatagacaagcagtattgtgtatgaagaagatgaaaatttggtgaatagagagtgatct |
124 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||| | ||| ||||| ||||| || || ||| ||| || |||||| |||||||||||| || |||||| |
|
|
| T |
3004893 |
aaattcagaaagtgaattccctgcaagaatgatatcatccacatatacaagaagaatagtgaatgttgaggatgaagatttggtgaataaggaatgatct |
3004794 |
T |
|
| Q |
125 |
gaatttgcttgcttgaaaccttgagccacaagtaatgaagtgagcttctcataccactttctgctagcttgctttaatccatagagagatttaatcagtt |
224 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| || || | || || |||||||| ||||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
3004793 |
gaattagcttgcttgaaaccttgagccacaagtaaagatgtcaatttttcttaccacttcctgcttgcttgctttaatccatagagggatttaatcagtt |
3004694 |
T |
|
| Q |
225 |
tgcaaacttgatttggtttggatgttttaacacctggaggaagttacatgtacacattttcttgcaagtcgccatgaagaaaagcattattgacat---a |
321 |
Q |
| |
|
|||| || ||||||||||| || | ||| |||||||| || |||| |||||||||||||||||| || || ||||||||||||||||||||||||| |
|
|
| T |
3004693 |
tgcatacctgatttggtttagaggatttgacacctggtgggagttgcatgtacacattttcttgtaactccccatgaagaaaagcattattgacatcaag |
3004594 |
T |
|
| Q |
322 |
ttgatggataaaccaatggtgaatggatgccaaagcaataatgagtatgacagtcgtaagcttagctacaggtgagtatgtgtcctagtaattcaaacct |
421 |
Q |
| |
|
||| || ||||||||||| ||||| ||||| || || ||||||||| ||||||| |||||||| ||||||||||||||||| || |||| | ||||| |
|
|
| T |
3004593 |
ttggtgaataaaccaatgatgaatagatgctaatgctataatgagtctgacagttgtaagctttgctacaggtgagtatgtatcaaagtagtctaaaccc |
3004494 |
T |
|
| Q |
422 |
tcaatctgattgtatcccttagcaaccaaacgtgctttgaatctttctatggaaccatctgcatgatgtttaatcttgtaaacccatatgcagcctattg |
521 |
Q |
| |
|
||||| |||||||||||||||||||| |||||||| |||||||||||||| ||||| ||||||||| |||||||||||| |
|
|
| T |
3004493 |
tcaatttgattgtatcccttagcaactaaacgtgc----------------------tctgcatgatgtttgatcttataaacccatctgcagcctattg |
3004416 |
T |
|
| Q |
522 |
gtttgatgtttggaggtaaatcaacaagtttttaagtaccagtttgttcaagagctgtaagttcggtctccatggctttattcaaacaatcaaattttct |
621 |
Q |
| |
|
|||||||||| |||||||||||||| | ||| |||||||| ||||||||||||| | |||||| ||||||||||| || ||| |||| ||||| || || |
|
|
| T |
3004415 |
gtttgatgttaggaggtaaatcaaccaatttccaagtaccaatttgttcaagagcagcaagttcagtctccatggccttgttccaacagtcaaacttact |
3004316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 11 - 283
Target Start/End: Complemental strand, 18477542 - 18477270
Alignment:
| Q |
11 |
gttttgatgtgtttaaattcagaaagtgaattgcctgctagaatgattttatctacatagacaagcagtattgtgtatgaagaagatgaaaatttggtga |
110 |
Q |
| |
|
||||||||||||| |||||||||||||||||| | ||| | |||||| | ||| ||||||| ||| ||||| ||| |||| |||||||| ||||||||| |
|
|
| T |
18477542 |
gttttgatgtgttcaaattcagaaagtgaattacttgcaaaaatgatatcatccacatagataagtagtatggtgaatgagaaagatgaagatttggtga |
18477443 |
T |
|
| Q |
111 |
atagagagtgatctgaatttgcttgcttgaaaccttgagccacaagtaatgaagtgagcttctcataccactttctgctagcttgctttaatccatagag |
210 |
Q |
| |
|
||||| | |||| |||||| ||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||| || |
|
|
| T |
18477442 |
atagaaaatgatatgaattagcttgattgaaaccttgaaccacaagtaaagaagtgagcttctcataccactttctgcttgcttgcttaaatccatatag |
18477343 |
T |
|
| Q |
211 |
agatttaatcagtttgcaaacttgatttggtttggatgttttaacacctggaggaagttacatgtacacattt |
283 |
Q |
| |
|
|||||| | || ||||||||||||||||||||||| | ||||||||| ||||| | ||||||||||||| |
|
|
| T |
18477342 |
agatttgactagcttgcaaacttgatttggtttggaagagttaacacctaatggaagctgcatgtacacattt |
18477270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 369 - 634
Target Start/End: Complemental strand, 18477264 - 18476997
Alignment:
| Q |
369 |
tgacagtcgtaagcttagctacaggtgagtatgtgtcctagtaattcaaaccttcaatctgattgtatcccttagcaaccaaacgtgctttgaatctttc |
468 |
Q |
| |
|
||||||| |||||||| |||||| |||| || |||| | |||| ||| ||||||||||| ||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
18477264 |
tgacagtggtaagcttggctacaagtgaatagatgtcaaaataatccaatccttcaatctggttgtatcccttagcaaccaaacgtgctttgagtctttc |
18477165 |
T |
|
| Q |
469 |
tatggaaccatctgcatgatgtttaatcttgtaaacccatatgcagcctattggtttgatgtttggaggtaaatcaacaagtttttaagtac--cagttt |
566 |
Q |
| |
|
|||||| ||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||| |||||||||||| |||| | ||||| |
|
|
| T |
18477164 |
tatggagaaatctgcatgatgtttaatcttttaaacccatttgcatcctattggtttgatgtttggaggtagatcaacaagtttccaagtgctatagttt |
18477065 |
T |
|
| Q |
567 |
gttcaagagctgtaagttcggtctccatggctttattcaaacaatcaaattttctagcctcaacatat |
634 |
Q |
| |
|
||||||||||| ||||||| ||||| ||||||||| || ||||| |||| | |||||||||| |||| |
|
|
| T |
18477064 |
gttcaagagctttaagttcagtctctatggctttaatccaacaaccaaacatgctagcctcaaaatat |
18476997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 160 - 264
Target Start/End: Complemental strand, 19666054 - 19665950
Alignment:
| Q |
160 |
tgaagtgagcttctcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaacttgatttggtttggatgttttaacacct |
259 |
Q |
| |
|
||||||||| || ||||||||||||||||| || || || | ||||| |||||||| || || |||||||| |||||||||||||| ||| |||||||| |
|
|
| T |
19666054 |
tgaagtgagtttttcataccactttctgcttgcctgtttaagaccataaagagatttcatgagcttgcaaacctgatttggtttggaggttgtaacacct |
19665955 |
T |
|
| Q |
260 |
ggagg |
264 |
Q |
| |
|
|||| |
|
|
| T |
19665954 |
tgagg |
19665950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 419 - 585
Target Start/End: Complemental strand, 19665792 - 19665626
Alignment:
| Q |
419 |
ccttcaatctgattgtatcccttagcaaccaaacgtgctttgaatctttctatggaaccatctgcatgatgtttaatcttgtaaacccatatgcagccta |
518 |
Q |
| |
|
|||| |||||||||||| ||||| ||||| | | ||| || ||||||| || | ||||||||||||| ||| || || || | ||| |||| |||| |
|
|
| T |
19665792 |
cctttaatctgattgtaacccttggcaacaagtcttgccttatatctttcaatagttccatctgcatgatatttgattttatatatccacctgcatccta |
19665693 |
T |
|
| Q |
519 |
ttggtttgatgtttggaggtaaatcaacaagtttttaagtaccagtttgttcaagagctgtaagttc |
585 |
Q |
| |
|
| ||||||||||| || |||||||| || ||||| |||||||||| | |||||||||||||||||| |
|
|
| T |
19665692 |
taggtttgatgttaggtggtaaatccaccagtttccaagtaccagtattttcaagagctgtaagttc |
19665626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 221 - 320
Target Start/End: Complemental strand, 33110544 - 33110445
Alignment:
| Q |
221 |
agtttgcaaacttgatttggtttggatgttttaacacctggaggaagttacatgtacacattttcttgcaagtcgccatgaagaaaagcattattgacat |
320 |
Q |
| |
|
||||| |||||||||||||||||||| | | |||||| ||| |||| | ||||||||||| ||| | | ||| |||||||| |||||||||||||||| |
|
|
| T |
33110544 |
agtttacaaacttgatttggtttggaagaatgaacaccaggatgaagcttcatgtacacatcttcatcaaggtctccatgaaggaaagcattattgacat |
33110445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 442 - 486
Target Start/End: Complemental strand, 14235558 - 14235514
Alignment:
| Q |
442 |
agcaaccaaacgtgctttgaatctttctatggaaccatctgcatg |
486 |
Q |
| |
|
||||||||||||||||||||| | |||||||| |||||||||||| |
|
|
| T |
14235558 |
agcaaccaaacgtgctttgaaacgttctatggtaccatctgcatg |
14235514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 16257844 - 16257774
Alignment:
| Q |
173 |
tcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaacttgatttggttt |
243 |
Q |
| |
|
|||||||| |||||||| ||||||||||| ||||| ||||| || | || ||| || |||||||||||||| |
|
|
| T |
16257844 |
tcataccattttctgctggcttgctttaaaccataaagagacttcaacaatttacacacttgatttggttt |
16257774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 261; Significance: 1e-145; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 13 - 628
Target Start/End: Complemental strand, 23682228 - 23681610
Alignment:
| Q |
13 |
tttgatgtgtttaaattcagaaagtgaattgcctgctagaatgattttatctacatagacaagcagtattgtgtatgaagaagatgaaaatttggtgaat |
112 |
Q |
| |
|
|||||||| || |||||||||||||||||| ||||| |||||||| | ||| ||||||||||| || || ||| ||| || |||||| ||||||||||| |
|
|
| T |
23682228 |
tttgatgttttgaaattcagaaagtgaatttcctgcaagaatgatatcatccacatagacaagaagaatagtgaatgttgaggatgaagatttggtgaat |
23682129 |
T |
|
| Q |
113 |
agagagtgatctgaatttgcttgcttgaaaccttgagccacaagtaatgaagtgagcttctcataccactttctgctagcttgctttaatccatagagag |
212 |
Q |
| |
|
| || ||||||||||| ||||||||||||||||||||||||||||| || || | | ||||||||||| |||| |||||||||||||||||||| | |
|
|
| T |
23682128 |
aaggaatgatctgaattagcttgcttgaaaccttgagccacaagtaaagatgtcaatatttcataccacttcatgcttgcttgctttaatccatagaggg |
23682029 |
T |
|
| Q |
213 |
atttaatcagtttgcaaacttgatttggtttggatgttttaacacctggaggaagttacatgtacacattttcttgcaagtcgccatgaagaaaagcatt |
312 |
Q |
| |
|
|||||||||||||||| || ||||||||||| | | ||| |||||||| || |||| |||||||||||||||||| || || ||||||||||||||||| |
|
|
| T |
23682028 |
atttaatcagtttgcatacatgatttggtttaaaggatttgacacctggtgggagttgcatgtacacattttcttgtaactccccatgaagaaaagcatt |
23681929 |
T |
|
| Q |
313 |
attgacata---ttgatggataaaccaatggtgaatggatgccaaagcaataatgagtatgacagtcgtaagcttagctacaggtgagtatgtgtcctag |
409 |
Q |
| |
|
|||||||| ||| || ||||||||||| ||||| ||||| || | ||||||||| ||||||| |||||||| |||||||||||||| || || || |
|
|
| T |
23681928 |
attgacatcaagttggtgaataaaccaatgatgaatagatgctaatgatataatgagtctgacagttgtaagctttgctacaggtgagtaggtatcaaag |
23681829 |
T |
|
| Q |
410 |
taattcaaaccttcaatctgattgtatcccttagcaaccaaacgtgctttgaatctttctatggaaccatctgcatgatgtttaatcttgtaaacccata |
509 |
Q |
| |
|
|| | ||||| ||||| ||||| || ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||| |
|
|
| T |
23681828 |
tagtctaaaccctcaatttgattatagcccttagcaactaaacgtgctttgaatctttctatggagccatctgcatgatgtttgatcttataaacccatc |
23681729 |
T |
|
| Q |
510 |
tgcagcctattggtttgatgtttggaggtaaatcaacaagtttttaagtaccagtttgttcaagagctgtaagttcggtctccatggctttattcaaaca |
609 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |||||| | ||| |||||||||||||||||||||| | |||||| ||||||||||| || ||| |||| |
|
|
| T |
23681728 |
tgcagcctattggtttgatgttaggaggtagatcaaccaatttccaagtaccagtttgttcaagagcagcaagttcagtctccatggccttgttccaaca |
23681629 |
T |
|
| Q |
610 |
atcaaattttctagcctca |
628 |
Q |
| |
|
||||| || ||||||||| |
|
|
| T |
23681628 |
gtcaaacttactagcctca |
23681610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 163 - 360
Target Start/End: Original strand, 4941697 - 4941897
Alignment:
| Q |
163 |
agtgagcttctcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaacttgatttggtttggatgttttaacacctgga |
262 |
Q |
| |
|
||||||| | |||||||| ||||| || || |||||||| ||||||||||||||||||| ||||||||||||||| ||||| || ||||| |||| | |
|
|
| T |
4941697 |
agtgagcctttcataccattttctactggcctgctttaaaccatagagagatttaatcaatttgcaaacttgattaggtttagaatctttaattcctgaa |
4941796 |
T |
|
| Q |
263 |
ggaagttacatgtacacattttcttgcaagtcgccatgaagaaaagcattattgacat---attgatggataaaccaatggtgaatggatgccaaagcaa |
359 |
Q |
| |
|
|| | || || |||||||| |||||||| || ||||||||||| ||||| || |||| |||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
4941797 |
ggtaattgcacgtacacatcctcttgcaattcaccatgaagaaatgcattgtttacatcaagttgatgtataaaccaatggtgaatagatgccaaagcaa |
4941896 |
T |
|
| Q |
360 |
t |
360 |
Q |
| |
|
| |
|
|
| T |
4941897 |
t |
4941897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 163 - 360
Target Start/End: Original strand, 5026777 - 5026977
Alignment:
| Q |
163 |
agtgagcttctcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaacttgatttggtttggatgttttaacacctgga |
262 |
Q |
| |
|
||||||| | |||||||| ||||| || || |||||||| ||||||||||||||||||| ||||||||||||||| ||||| || ||||| |||| | |
|
|
| T |
5026777 |
agtgagcctttcataccattttctactggcctgctttaaaccatagagagatttaatcaatttgcaaacttgattaggtttagaatctttaattcctgaa |
5026876 |
T |
|
| Q |
263 |
ggaagttacatgtacacattttcttgcaagtcgccatgaagaaaagcattattgacat---attgatggataaaccaatggtgaatggatgccaaagcaa |
359 |
Q |
| |
|
|| | || || |||||||| |||||||| || ||||||||||| ||||| || |||| |||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
5026877 |
ggtaattgcacgtacacatcctcttgcaattcaccatgaagaaatgcattgtttacatcaagttgatgtataaaccaatggtgaatagatgccaaagcaa |
5026976 |
T |
|
| Q |
360 |
t |
360 |
Q |
| |
|
| |
|
|
| T |
5026977 |
t |
5026977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 114 - 484
Target Start/End: Complemental strand, 16157963 - 16157590
Alignment:
| Q |
114 |
gagagtgatctgaatttgcttgcttgaaaccttgagccacaagtaatgaagtgagcttctcataccactttctgctagcttgctttaatccatagagaga |
213 |
Q |
| |
|
||||||| ||||||||||| ||||| | |||||||||| | ||| | || |||| | |||||||| ||||| || || |||||||| ||||||||||| |
|
|
| T |
16157963 |
gagagtggtctgaatttgcatgcttatatccttgagccagtaataaagcagcgagcctttcataccattttctactggcctgctttaaaccatagagaga |
16157864 |
T |
|
| Q |
214 |
tttaatcagtttgcaaacttgatttggtttggatgttttaacacctggaggaagttacatgtacacattttcttgcaagtcgccatgaagaaaagcatta |
313 |
Q |
| |
|
||| | || ||| |||||| |||| ||||| || | || || | |||| | | |||||| ||||| ||| ||| || |||||||| || ||||| |
|
|
| T |
16157863 |
ttttaccaatttacaaactcgattaggtttagaagcttcaattattcgaggtaactgcatgtaaacattctctcgcagttcaccatgaaggaatgcattg |
16157764 |
T |
|
| Q |
314 |
ttgacata---ttgatggataaaccaatggtgaatggatgccaaagcaataatgagtatgacagtcgtaagcttagctacaggtgagtatgtgtcctagt |
410 |
Q |
| |
|
|| |||| |||||||||||||||||||||||| |||||||||||||| | | | |||| || ||||| || | ||||| || || ||||| ||| |
|
|
| T |
16157763 |
tttacatcaagttgatggataaaccaatggtgaatagatgccaaagcaatcaccactctgactgtagtaagtttgacaacaggagaataagtgtcaaagt |
16157664 |
T |
|
| Q |
411 |
aattcaaaccttcaatctgattgtatcccttagcaaccaaacgtgctttgaatctttctatggaaccatctgca |
484 |
Q |
| |
|
| | |||||||||||| ||| | ||||| |||||| | ||||||||||| ||||| || ||||||||||||||| |
|
|
| T |
16157663 |
agtccaaaccttcaatttgagtatatcctttagcagctaaacgtgctttaaatctctcaatggaaccatctgca |
16157590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 161 - 246
Target Start/End: Original strand, 21807909 - 21807994
Alignment:
| Q |
161 |
gaagtgagcttctcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaacttgatttggtttgga |
246 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| || | ||||| || |||||||| |||||||||||||||||||||||||| |
|
|
| T |
21807909 |
gaagtgagcttctcataccactttctgcttgcttgtttaagaccatatagggatttaatgagtttgcaaacttgatttggtttgga |
21807994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 419 - 527
Target Start/End: Original strand, 20482755 - 20482863
Alignment:
| Q |
419 |
ccttcaatctgattgtatcccttagcaaccaaacgtgctttgaatctttctatggaaccatctgcatgatgtttaatcttgtaaacccatatgcagccta |
518 |
Q |
| |
|
|||||||||||||| |||||||||||||| |||||||||||| |||| || || || |||||||||| |||||| | || ||||| |||||||| |||| |
|
|
| T |
20482755 |
ccttcaatctgattatatcccttagcaactaaacgtgctttgtatctctcaatagagccatctgcattatgtttcactttataaacacatatgcacccta |
20482854 |
T |
|
| Q |
519 |
ttggtttga |
527 |
Q |
| |
|
| ||||||| |
|
|
| T |
20482855 |
taggtttga |
20482863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 419 - 527
Target Start/End: Complemental strand, 28018432 - 28018324
Alignment:
| Q |
419 |
ccttcaatctgattgtatcccttagcaaccaaacgtgctttgaatctttctatggaaccatctgcatgatgtttaatcttgtaaacccatatgcagccta |
518 |
Q |
| |
|
|||||||||||||| |||||||||||||| |||||||||||| |||| || || || |||||||||| ||| || | || ||||||||| |||| |||| |
|
|
| T |
28018432 |
ccttcaatctgattatatcccttagcaactaaacgtgctttgtatctctcaatagagccatctgcattatgcttcactttataaacccatctgcacccta |
28018333 |
T |
|
| Q |
519 |
ttggtttga |
527 |
Q |
| |
|
| ||||||| |
|
|
| T |
28018332 |
taggtttga |
28018324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 160 - 237
Target Start/End: Original strand, 28155272 - 28155349
Alignment:
| Q |
160 |
tgaagtgagcttctcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaacttgatt |
237 |
Q |
| |
|
|||||||||||||||| |||| || ||||||| |||||| | ||||||||||||||| ||||| ||||||||||| |
|
|
| T |
28155272 |
tgaagtgagcttctcaaaccatttcctgctaggttgcttgagaccatagagagatttatgaagtttacaaacttgatt |
28155349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 257; Significance: 1e-143; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 13 - 628
Target Start/End: Original strand, 36731376 - 36731994
Alignment:
| Q |
13 |
tttgatgtgtttaaattcagaaagtgaattgcctgctagaatgattttatctacatagacaagcagtattgtgtatgaagaagatgaaaatttggtgaat |
112 |
Q |
| |
|
|||||||| || ||||| |||||||||||| ||||| |||||||| | ||| ||||| ||||| || || ||| ||| || |||||| ||||||||||| |
|
|
| T |
36731376 |
tttgatgttttgaaatttagaaagtgaattccctgcaagaatgatatcatccacatatacaagaagaatagtgaatgttgaggatgaagatttggtgaat |
36731475 |
T |
|
| Q |
113 |
agagagtgatctgaatttgcttgcttgaaaccttgagccacaagtaatgaagtgagcttctcataccactttctgctagcttgctttaatccatagagag |
212 |
Q |
| |
|
| || ||||||||||| ||||||||||||||||||||||||||||| || | | || |||||||| ||||||||||||||||| ||||||||||| | |
|
|
| T |
36731476 |
aaggaatgatctgaattagcttgcttgaaaccttgagccacaagtaaagatgacaatttttcataccattttctgctagcttgcttcaatccatagaggg |
36731575 |
T |
|
| Q |
213 |
atttaatcagtttgcaaacttgatttggtttggatgttttaacacctggaggaagttacatgtacacattttcttgcaagtcgccatgaagaaaagcatt |
312 |
Q |
| |
|
|||||||||||||||| || ||||||||||| | | ||| |||| ||| || |||| || ||||||||||||||| || || |||||||||||||||| |
|
|
| T |
36731576 |
atttaatcagtttgcatacctgatttggtttagcggatttgacacttggtgggagttgcaagtacacattttcttgtaactccacatgaagaaaagcatt |
36731675 |
T |
|
| Q |
313 |
attgacata---ttgatggataaaccaatggtgaatggatgccaaagcaataatgagtatgacagtcgtaagcttagctacaggtgagtatgtgtcctag |
409 |
Q |
| |
|
|||||||| ||| || ||||||||||| ||||| ||||| || || ||||||||| ||||||| ||||| || ||||||||||||||||| || || |
|
|
| T |
36731676 |
attgacatcaagttggtgaataaaccaatgatgaatagatgctaatgctataatgagtctgacagttgtaagttttgctacaggtgagtatgtatcaaag |
36731775 |
T |
|
| Q |
410 |
taattcaaaccttcaatctgattgtatcccttagcaaccaaacgtgctttgaatctttctatggaaccatctgcatgatgtttaatcttgtaaacccata |
509 |
Q |
| |
|
|| | ||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||| |
|
|
| T |
36731776 |
tagtctaaaccctcaatttgattgtatcccttagcaactaaacgtgctttgaatctttctatggagccatctgcatgatgtttgatcttataaacccatc |
36731875 |
T |
|
| Q |
510 |
tgcagcctattggtttgatgtttggaggtaaatcaacaagtttttaagtaccagtttgttcaagagctgtaagttcggtctccatggctttattcaaaca |
609 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| | ||| |||||||||||||||||||||| | |||||| |||||||| || || ||| |||| |
|
|
| T |
36731876 |
tgcagcctattggtttgatgttaggaggtaaatcaaccaatttccaagtaccagtttgttcaagagcagcaagttcagtctccatagccttgttccaaca |
36731975 |
T |
|
| Q |
610 |
atcaaattttctagcctca |
628 |
Q |
| |
|
||||| || ||||||||| |
|
|
| T |
36731976 |
gtcaaacttactagcctca |
36731994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 25 - 625
Target Start/End: Original strand, 23884200 - 23884803
Alignment:
| Q |
25 |
aaattcagaaagtgaattgcctgctagaatgattttatctacatagacaagcagtattgtgtatgaagaagatgaaaatttggtgaatagagagtgatct |
124 |
Q |
| |
|
||||||| ||||||| || ||||| |||||||| | ||| ||||| ||||| ||||||||| ||||||||||| | |||||||||||| || | || | |
|
|
| T |
23884200 |
aaattcataaagtgagtttcctgcaagaatgatatcatccacatacacaagaagtattgtgaatgaagaagatcatgatttggtgaataatgaattattt |
23884299 |
T |
|
| Q |
125 |
gaatttgcttgcttgaaaccttgagccacaagtaatgaagtgagcttctcataccactttctgctagcttgctttaatccatagagagatttaatcagtt |
224 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||||| |||| | ||| ||||||||||| ||||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
23884300 |
gaattagcttgcttgaagccttgagccacaagtaaaaaagtcaacttttcataccacttcctgcttgcttgctttaatccatagagggatttaatcagtt |
23884399 |
T |
|
| Q |
225 |
tgcaaacttgatttggtttggatgttttaacacctggaggaagttacatgtacacattttcttgcaagtcgccatgaagaaaagcattattgacata--- |
321 |
Q |
| |
|
|||| || ||||||||||| || | ||| || ||||| ||||||| |||||||||||||||||| || || ||||||||||| ||||||||||||| |
|
|
| T |
23884400 |
tgcagacctgatttggtttagaggatttgacgcctggtggaagtttcatgtacacattttcttgtaactcaccatgaagaaatgcattattgacatcaat |
23884499 |
T |
|
| Q |
322 |
ttgatggataaaccaatggtgaatggatgccaaagcaataatgagtatgacagtcgtaagcttagctacaggtgagtatgtgtcctagtaattcaaacct |
421 |
Q |
| |
|
||| || || |||||||| ||||| ||||||||||| ||||||||| | ||||| |||||||| ||||||||||| |||||||| |||||| ||||| |
|
|
| T |
23884500 |
ttggtgaatgaaccaatgatgaatagatgccaaagctataatgagtctaacagttgtaagctttgctacaggtgaatatgtgtcaaagtaatctaaaccc |
23884599 |
T |
|
| Q |
422 |
tcaatctgattgtatcccttagcaaccaaacgtgctttgaatctttctatggaaccatctgcatgatgtttaatcttgtaaacccatatgcagcctattg |
521 |
Q |
| |
|
||||| |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| ||||| ||||| ||||||||| |||| ||||||| |
|
|
| T |
23884600 |
tcaatttgattgtatcccttagcaactaaacgtgcattgaatctttctatggagccatctgcatggtgtttgatcttataaacccatctgcaacctattg |
23884699 |
T |
|
| Q |
522 |
gtttgatgtttggaggtaaatcaacaagtttttaagtaccagtttgttcaagagctgtaagttcggtctccatggctttattcaaacaatcaaattttct |
621 |
Q |
| |
|
|||||||||| | ||||| ||||| || || |||| ||||||||||||||| | |||||||| ||||||||||| || ||| |||| ||||| || || |
|
|
| T |
23884700 |
gtttgatgttagaaggtagttcaaccagcttccaagtgccagtttgttcaagaacagtaagttcagtctccatggccttgttccaacagtcaaacttact |
23884799 |
T |
|
| Q |
622 |
agcc |
625 |
Q |
| |
|
|||| |
|
|
| T |
23884800 |
agcc |
23884803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 419 - 527
Target Start/End: Original strand, 16989920 - 16990028
Alignment:
| Q |
419 |
ccttcaatctgattgtatcccttagcaaccaaacgtgctttgaatctttctatggaaccatctgcatgatgtttaatcttgtaaacccatatgcagccta |
518 |
Q |
| |
|
|||||||||||||| |||||||||||||| |||||||||||| |||| || || || |||||||||| |||||| | || ||||||||| |||| |||| |
|
|
| T |
16989920 |
ccttcaatctgattatatcccttagcaactaaacgtgctttgtatctctcaatagagccatctgcattatgtttcactttataaacccatctgcacccta |
16990019 |
T |
|
| Q |
519 |
ttggtttga |
527 |
Q |
| |
|
| ||||||| |
|
|
| T |
16990020 |
taggtttga |
16990028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 23958591 - 23958515
Alignment:
| Q |
170 |
ttctcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaacttgatttggtttgga |
246 |
Q |
| |
|
||||||||| |||| |||||||||||||||| |||||||| ||||| | ||||| || ||||||||||||||||| |
|
|
| T |
23958591 |
ttctcatacaacttcctgctagcttgctttagaccatagagtgatttgagaagtttacagacttgatttggtttgga |
23958515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 169 - 312
Target Start/End: Complemental strand, 15450146 - 15450003
Alignment:
| Q |
169 |
cttctcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaacttgatttggtttggatgttttaacacctggaggaagt |
268 |
Q |
| |
|
|||||||||||| |||||||||||||| || | |||| |||||||| |||| || |||| |||||||||||| |||| | ||||||||| ||||| |
|
|
| T |
15450146 |
cttctcataccattttctgctagcttgtttgaggtcatatagagatttcatcaacttacaaaattgatttggtttagatgatgaaacacctggtggaaga |
15450047 |
T |
|
| Q |
269 |
tacatgtacacattttcttgcaagtcgccatgaagaaaagcatt |
312 |
Q |
| |
|
|||||| |||| ||||||| || |||||||| |||||||| |
|
|
| T |
15450046 |
gtcatgtatacatcctcttgcagatcaccatgaaggaaagcatt |
15450003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 348 - 527
Target Start/End: Original strand, 26465803 - 26465982
Alignment:
| Q |
348 |
atgccaaagcaataatgagtatgacagtcgtaagcttagctacaggtgagtatgtgtcctagtaattcaaaccttcaatctgattgtatcccttagcaac |
447 |
Q |
| |
|
|||| ||||| |||||| | ||||||| || || ||||| || ||||| ||||| || | |||| |||||| ||||| || ||||| ||||| ||||| |
|
|
| T |
26465803 |
atgctaaagctataatggttctgacagttgtgagtttagcaactggtgaatatgtatcaaaataatccaaaccctcaatttggttgtaaccctttgcaac |
26465902 |
T |
|
| Q |
448 |
caaacgtgctttgaatctttctatggaaccatctgcatgatgtttaatcttgtaaacccatatgcagcctattggtttga |
527 |
Q |
| |
|
| | ||||||| ||||||| || || ||||||||||||||||| |||||||| | |||| |||| |||| ||||||| |
|
|
| T |
26465903 |
aagtcttgctttgtatctttcaattgagccatctgcatgatgtttgatcttgtatatccatctgcaaactataggtttga |
26465982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 26465625 - 26465691
Alignment:
| Q |
173 |
tcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaacttgatttg |
239 |
Q |
| |
|
||||||||||||||||| |||||||| | ||||| ||||| || || ||||||||||||||||||| |
|
|
| T |
26465625 |
tcataccactttctgcttgcttgcttaagaccataaagagacttgataagtttgcaaacttgatttg |
26465691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 245
Target Start/End: Original strand, 9845791 - 9845866
Alignment:
| Q |
170 |
ttctcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaacttgatttggtttgg |
245 |
Q |
| |
|
||||||||||| | |||||||||||| || | ||||||||| || |||| ||||| ||||||||||| ||||||| |
|
|
| T |
9845791 |
ttctcataccattgtctgctagcttgtttgagtccatagagtgacttaacaagtttacaaacttgattaggtttgg |
9845866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 476 - 576
Target Start/End: Complemental strand, 23958282 - 23958182
Alignment:
| Q |
476 |
ccatctgcatgatgtttaatcttgtaaacccatatgcagcctattggtttgatgtttggaggtaaatcaacaagtttttaagtaccagtttgttcaagag |
575 |
Q |
| |
|
|||| |||||||||||| || ||||||| |||| |||| ||| | ||||| | ||||| ||||||||||| | ||| |||||||||| | |||||||| |
|
|
| T |
23958282 |
ccatatgcatgatgtttgattttgtaaatccatctgcatcctttaggtttcacatttggtggtaaatcaaccattttccaagtaccagtattttcaagag |
23958183 |
T |
|
| Q |
576 |
c |
576 |
Q |
| |
|
| |
|
|
| T |
23958182 |
c |
23958182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 71; Significance: 8e-32; HSPs: 13)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 332 - 634
Target Start/End: Complemental strand, 31273338 - 31273036
Alignment:
| Q |
332 |
aaccaatggtgaatggatgccaaagcaataatgagtatgacagtcgtaagcttagctacaggtgagtatgtgtcctagtaattcaaaccttcaatctgat |
431 |
Q |
| |
|
|||||||| ||||| |||| |||||||||| ||| | | || |||| |||||| ||||||||||||||||| |||||| ||||||| || |||| |
|
|
| T |
31273338 |
aaccaatgatgaattgatgttaaagcaataacaagtctcattgtagtaaacttagcaacaggtgagtatgtgtcaaagtaatctaaaccttatatatgat |
31273239 |
T |
|
| Q |
432 |
tgtatcccttagcaaccaaacgtgctttgaatctttctatggaaccatctgcatgatgtttaatcttgtaaacccatatgcagcctattggtttgatgtt |
531 |
Q |
| |
|
| || ||||| ||||| || || ||||| || ||||||||||| | ||||||||||||| ||||||| || |||| | |||| || || |||||||| || |
|
|
| T |
31273238 |
tttaaccctttgcaactaagcgggctttaaacctttctatggatcaatctgcatgatgtctaatcttatatacccttctgcaaccaataggtttgatatt |
31273139 |
T |
|
| Q |
532 |
tggaggtaaatcaacaagtttttaagtaccagtttgttcaagagctgtaagttcggtctccatggctttattcaaacaatcaaattttctagcctcaaca |
631 |
Q |
| |
|
|||| |||||||| ||| |||| | ||||||||||||||| |||||||| ||||||||| | |||||| | ||||||||||| |||| |||| || |
|
|
| T |
31273138 |
aaagggtagatcaacaactttccaagttcgagtttgttcaagagcagtaagttcagtctccatgaccttattccatcaatcaaatttactaggctcatca |
31273039 |
T |
|
| Q |
632 |
tat |
634 |
Q |
| |
|
||| |
|
|
| T |
31273038 |
tat |
31273036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 161 - 320
Target Start/End: Complemental strand, 31961691 - 31961532
Alignment:
| Q |
161 |
gaagtgagcttctcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaacttgatttggtttggatgttttaacacctg |
260 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | ||||| |||||||| || |||||||| |||||||| ||||| | || || |||||| |
|
|
| T |
31961691 |
gaagtgagcttctcataccactttctgctagcttgcttaagaccataaagagatttcatgagtttgcagacttgattgggttttgtagtgttgacacctt |
31961592 |
T |
|
| Q |
261 |
gaggaagttacatgtacacattttcttgcaagtcgccatgaagaaaagcattattgacat |
320 |
Q |
| |
|
|||| | ||||||||||| |||||| | || ||||||| ||| |||||||| |||| |
|
|
| T |
31961591 |
gaggcacaatcatgtacacatcttcttgtatatcaccatgaaaaaatgcattattcacat |
31961532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 28561371 - 28561298
Alignment:
| Q |
173 |
tcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaacttgatttggtttgga |
246 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| |||||||| || ||||||||||||||||| |||||||| |
|
|
| T |
28561371 |
tcataccactttctgctagcttgctttggtccataaagagatttcatgagtttgcaaacttgattaggtttgga |
28561298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 415 - 498
Target Start/End: Complemental strand, 34067980 - 34067897
Alignment:
| Q |
415 |
caaaccttcaatctgattgtatcccttagcaaccaaacgtgctttgaatctttctatggaaccatctgcatgatgtttaatctt |
498 |
Q |
| |
|
|||||| || ||||||||||| || |||||||| |||||||||||| ||||||||||||| ||||||||||||| ||| ||||| |
|
|
| T |
34067980 |
caaaccctctatctgattgtaacctttagcaactaaacgtgctttgtatctttctatggacccatctgcatgatatttgatctt |
34067897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 419 - 527
Target Start/End: Complemental strand, 6343403 - 6343295
Alignment:
| Q |
419 |
ccttcaatctgattgtatcccttagcaaccaaacgtgctttgaatctttctatggaaccatctgcatgatgtttaatcttgtaaacccatatgcagccta |
518 |
Q |
| |
|
|||||||||||||| |||||||||||||| |||||||||||| |||| || || || |||||||||| ||| || | || ||||||||| |||| |||| |
|
|
| T |
6343403 |
ccttcaatctgattatatcccttagcaactaaacgtgctttgtatctctcaatagagccatctgcattatgcttcactttataaacccatctgcacccta |
6343304 |
T |
|
| Q |
519 |
ttggtttga |
527 |
Q |
| |
|
| ||||||| |
|
|
| T |
6343303 |
taggtttga |
6343295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 552
Target Start/End: Complemental strand, 12302012 - 12301882
Alignment:
| Q |
422 |
tcaatctgattgtatcccttagcaaccaaacgtgctttgaatctttctatggaaccatctgcatgatgtttaatcttgtaaacccatatgcagcctattg |
521 |
Q |
| |
|
||||| |||||||| ||||||||||| || | ||||||| | || |||||||| |||||||||| ||||| ||||| || | |||| | || ||||| | |
|
|
| T |
12302012 |
tcaatttgattgtaacccttagcaacaaatcttgctttgtagctctctatggagccatctgcattgtgtttgatcttatatatccatcttcaacctatag |
12301913 |
T |
|
| Q |
522 |
gtttgatgtttggaggtaaatcaacaagttt |
552 |
Q |
| |
|
||||||| || || ||||||| ||| ||||| |
|
|
| T |
12301912 |
gtttgatattaggtggtaaattaaccagttt |
12301882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 442 - 486
Target Start/End: Complemental strand, 22844053 - 22844009
Alignment:
| Q |
442 |
agcaaccaaacgtgctttgaatctttctatggaaccatctgcatg |
486 |
Q |
| |
|
||||||||||||||||||||| | |||||||| |||||||||||| |
|
|
| T |
22844053 |
agcaaccaaacgtgctttgaaacgttctatggtaccatctgcatg |
22844009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 26970999 - 26970915
Alignment:
| Q |
162 |
aagtgagcttctcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaacttgatttggtttgga |
246 |
Q |
| |
|
||||||| ||||||||||||||||| || | |||||| | ||||||| ||||||| | || |||||||||||||| || ||||| |
|
|
| T |
26970999 |
aagtgagtttctcataccactttctacttgtttgcttgaggccatagatagatttagtaagcttgcaaacttgattaggcttgga |
26970915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 582
Target Start/End: Complemental strand, 14617321 - 14617158
Alignment:
| Q |
419 |
ccttcaatctgattgtatcccttagcaaccaaacgtgctttgaatctttctatggaaccatctgcatgatgtttaatcttgtaaacccatatgcagccta |
518 |
Q |
| |
|
||||||||||||||||| ||||||||||||| | ||| || ||||||| |||| |||| |||||||| |||||| ||||| | ||| || |||| |
|
|
| T |
14617321 |
ccttcaatctgattgtaacccttagcaaccagtcttgccttatatctttcaatggtgccatttgcatgatatttaattttgtatatccaccgacatccta |
14617222 |
T |
|
| Q |
519 |
ttggtttgatgtttggaggtaaatcaacaagtttttaagtaccagtttgttcaagagctgtaag |
582 |
Q |
| |
|
||||||| || | | |||||| | || ||||| |||||||||| | ||||||||||||||| |
|
|
| T |
14617221 |
ttggtttaatatcagctggtaaacccaccagtttccaagtaccagtattttcaagagctgtaag |
14617158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 26134766 - 26134696
Alignment:
| Q |
173 |
tcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaacttgatttggttt |
243 |
Q |
| |
|
|||||||| |||||||| ||||||||||| ||||| ||||| || | || ||| || |||||||||||||| |
|
|
| T |
26134766 |
tcataccattttctgctggcttgctttaaaccataaagagacttcaacaatttacacacttgatttggttt |
26134696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 249
Target Start/End: Complemental strand, 31273659 - 31273425
Alignment:
| Q |
13 |
tttgatgtgtttaaattcagaaagtgaattgcctgctagaatgattttatctacatagacaagcagtattgtgtatgaagaagatgaaaatttggtgaat |
112 |
Q |
| |
|
|||||||| ||||| |||||| |||||| ||||||| ||| || | |||||||||||| | | || ||| ||| || || |||| ||||||| ||| |
|
|
| T |
31273659 |
tttgatgttgttaaactcagaa--tgaatttcctgctaaaataatatcatctacatagaccaaaatgatggtgaatgtagtagctgaagatttggtaaat |
31273562 |
T |
|
| Q |
113 |
agagagtgatctgaatttgcttgcttgaaaccttgagccacaagtaatgaagtgagcttctcataccactttctgctagcttgctttaatccatagagag |
212 |
Q |
| |
|
|| || |||| ||| || || |||||| | |||||||||| | || || |||||| | |||||||| |||||| ||| |||| ||||||||||| | |
|
|
| T |
31273561 |
agtgaatgatatgagttagcatgcttgtatccttgagccaataacaaagaggtgagcctttcataccattttctggaggctcgcttcaatccatagaggg |
31273462 |
T |
|
| Q |
213 |
atttaatcagtttgcaaacttgatttggtttggatgt |
249 |
Q |
| |
|
|||||| || || ||||||||||| ||||| ||||| |
|
|
| T |
31273461 |
atttaaccaattatcaaacttgattgggtttagatgt |
31273425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 25420131 - 25420171
Alignment:
| Q |
167 |
agcttctcataccactttctgctagcttgctttaatccata |
207 |
Q |
| |
|
|||||||||||||||||| |||||||||| ||||| ||||| |
|
|
| T |
25420131 |
agcttctcataccactttatgctagcttgttttaaaccata |
25420171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 34068228 - 34068152
Alignment:
| Q |
170 |
ttctcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaacttgatttggtttgga |
246 |
Q |
| |
|
||||||||||||||||| || || || || ||||||||||| ||||||| ||||||| || ||||| |||||||| |
|
|
| T |
34068228 |
ttctcataccactttctactggcctgtttcaatccatagagtgatttaactagtttgctgacctgattgggtttgga |
34068152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 65; Significance: 3e-28; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 478 - 634
Target Start/End: Original strand, 23375712 - 23375868
Alignment:
| Q |
478 |
atctgcatgatgtttaatcttgtaaacccatatgcagcctattggtttgatgtttggaggtaaatcaacaagtttttaagtaccagtttgttcaagagct |
577 |
Q |
| |
|
||||||||||||||||||||| || ||||| ||||||| || ||||| || || |||||||||||||||| ||| |||| | ||||||| ||||||| |
|
|
| T |
23375712 |
atctgcatgatgtttaatcttatattcccatctgcagccaataggttttatattgggaggtaaatcaacaattttccaagttctagtttgtacaagagca |
23375811 |
T |
|
| Q |
578 |
gtaagttcggtctccatggctttattcaaacaatcaaattttctagcctcaacatat |
634 |
Q |
| |
|
||||||| |||| |||||| |||||| |||| |||||||| ||||||||||||||| |
|
|
| T |
23375812 |
ataagttcagtcttcatggccttattccaacagtcaaatttactagcctcaacatat |
23375868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 164 - 244
Target Start/End: Original strand, 4644849 - 4644929
Alignment:
| Q |
164 |
gtgagcttctcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaacttgatttggtttg |
244 |
Q |
| |
|
||||||||||||||||||||||| || ||||| || |||||||| || ||||| | ||||||||||| |||||||||||| |
|
|
| T |
4644849 |
gtgagcttctcataccactttctacttgcttgtttcaatccatacagtgattttactagtttgcaaacctgatttggtttg |
4644929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 577
Target Start/End: Original strand, 19585795 - 19585950
Alignment:
| Q |
422 |
tcaatctgattgtatcccttagcaaccaaacgtgctttgaatctttctatggaaccatctgcatgatgtttaatcttgtaaacccatatgcagcctattg |
521 |
Q |
| |
|
|||||||||||||| ||||| ||||| || | |||||| ||||||| ||||||||||| |||||| ||||| || |||| |||| | || || || | |
|
|
| T |
19585795 |
tcaatctgattgtaaccctttgcaactaatctggctttgtatctttcaatggaaccatcaacatgatatttaactttataaatccatctacatccaatgg |
19585894 |
T |
|
| Q |
522 |
gtttgatgtttggaggtaaatcaacaagtttttaagtaccagtttgttcaagagct |
577 |
Q |
| |
|
||||||| || | ||||||||||||||||| | |||||||||| ||||||||| |
|
|
| T |
19585895 |
gtttgatattggatggtaaatcaacaagtttccaggtaccagttttctcaagagct |
19585950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 422 - 577
Target Start/End: Complemental strand, 12286496 - 12286341
Alignment:
| Q |
422 |
tcaatctgattgtatcccttagcaaccaaacgtgctttgaatctttctatggaaccatctgcatgatgtttaatcttgtaaacccatatgcagcctattg |
521 |
Q |
| |
|
|||||||||||||| ||||| ||||| || | |||||| ||||||| ||||||||||| |||||| ||||| || |||| |||| | || || || | |
|
|
| T |
12286496 |
tcaatctgattgtaaccctttgcaactaatctggctttgtatctttcaatggaaccatcaacatgatatttaactttataaatccatctacatccaatgg |
12286397 |
T |
|
| Q |
522 |
gtttgatgtttggaggtaaatcaacaagtttttaagtaccagtttgttcaagagct |
577 |
Q |
| |
|
||||||| || | |||||||||||||||| | |||||||||| ||||||||| |
|
|
| T |
12286396 |
gtttgatattggatggtaaatcaacaagttgccaggtaccagttttctcaagagct |
12286341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 161 - 320
Target Start/End: Original strand, 18963535 - 18963694
Alignment:
| Q |
161 |
gaagtgagcttctcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaacttgatttggtttggatgttttaacacctg |
260 |
Q |
| |
|
|||||||| || |||||||||||||||||||||||||| | |||| |||||||| | || || ||||||||||| |||||||| || | |||||| |
|
|
| T |
18963535 |
gaagtgaggttttcataccactttctgctagcttgcttgagaacataaagagattttaagagctttcaaacttgattaggtttggaagtagtgacacctt |
18963634 |
T |
|
| Q |
261 |
gaggaagttacatgtacacattttcttgcaagtcgccatgaagaaaagcattattgacat |
320 |
Q |
| |
|
| || | ||| ||||||| |||||| || || ||||| |||||||||||||| |||| |
|
|
| T |
18963635 |
gtggtacaagcatatacacatcttcttgtaaatcaccatgtagaaaagcattattcacat |
18963694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 432 - 582
Target Start/End: Original strand, 18963809 - 18963959
Alignment:
| Q |
432 |
tgtatcccttagcaaccaaacgtgctttgaatctttctatggaaccatctgcatgatgtttaatcttgtaaacccatatgcagcctattggtttgatgtt |
531 |
Q |
| |
|
|||| ||||||||||| | | ||||||| |||| |||||||| |||||||||||||| || ||||||| | |||| || | ||||| |||||||| || |
|
|
| T |
18963809 |
tgtaacccttagcaactagtcttgctttgtatctctctatggagccatctgcatgatgcttggtcttgtagatccatctgaaacctataggtttgatatt |
18963908 |
T |
|
| Q |
532 |
tggaggtaaatcaacaagtttttaagtaccagtttgttcaagagctgtaag |
582 |
Q |
| |
|
|| ||||||| || ||||| |||| ||||| | |||||||| |||||| |
|
|
| T |
18963909 |
aggtggtaaattcactagtttccaagttccagtattttcaagagttgtaag |
18963959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 134 - 243
Target Start/End: Original strand, 23374180 - 23374289
Alignment:
| Q |
134 |
tgcttgaaaccttgagccacaagtaatgaagtgagcttctcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaactt |
233 |
Q |
| |
|
|||||| |||||||||||| | ||| || |||||| | |||||||| ||||| |||||||||||||||||||| ||||||| || ||| |||||| |
|
|
| T |
23374180 |
tgcttgtaaccttgagccagcaataaagaggtgagcctttcataccattttctagaggcttgctttaatccatagagggatttaaccaatttacaaacta |
23374279 |
T |
|
| Q |
234 |
gatttggttt |
243 |
Q |
| |
|
|||| ||||| |
|
|
| T |
23374280 |
gattaggttt |
23374289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 31193959 - 31194029
Alignment:
| Q |
173 |
tcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaacttgatttggttt |
243 |
Q |
| |
|
|||||||| |||||||| ||||||||||| ||||| ||||| || | || ||| || |||||||||||||| |
|
|
| T |
31193959 |
tcataccattttctgctggcttgctttaaaccataaagagacttcaacaatttacacacttgatttggttt |
31194029 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 52774354 - 52774284
Alignment:
| Q |
173 |
tcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaacttgatttggttt |
243 |
Q |
| |
|
|||||||| |||||||| ||||||||||| ||||| ||||| || | || ||| || |||||||||||||| |
|
|
| T |
52774354 |
tcataccattttctgctggcttgctttaaaccataaagagacttcaacaatttacacacttgatttggttt |
52774284 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 58; Significance: 5e-24; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 161 - 246
Target Start/End: Complemental strand, 16988045 - 16987960
Alignment:
| Q |
161 |
gaagtgagcttctcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaacttgatttggtttgga |
246 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| || | |||||||| |||||||| |||||||||||||||||||||||||| |
|
|
| T |
16988045 |
gaagtgagcttctcataccactttctgcttgcttgtttaagaccatagagggatttaatgagtttgcaaacttgatttggtttgga |
16987960 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 161 - 237
Target Start/End: Complemental strand, 35088629 - 35088553
Alignment:
| Q |
161 |
gaagtgagcttctcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaacttgatt |
237 |
Q |
| |
|
|||||||| |||||||||||||| || |||||||| ||||||||||||||||| || | ||||||||||| ||||| |
|
|
| T |
35088629 |
gaagtgagtttctcataccacttcctactagcttgttttaatccatagagagacttcttaagtttgcaaacctgatt |
35088553 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 408 - 465
Target Start/End: Complemental strand, 14040028 - 14039971
Alignment:
| Q |
408 |
agtaattcaaaccttcaatctgattgtatcccttagcaaccaaacgtgctttgaatct |
465 |
Q |
| |
|
|||||| ||| |||||||||||||| |||||||||||||||||| |||||||| |||| |
|
|
| T |
14040028 |
agtaatccaagccttcaatctgattatatcccttagcaaccaaaagtgctttgtatct |
14039971 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 419 - 525
Target Start/End: Complemental strand, 17130796 - 17130690
Alignment:
| Q |
419 |
ccttcaatctgattgtatcccttagcaaccaaacgtgctttgaatctttctatggaaccatctgcatgatgtttaatcttgtaaacccatatgcagccta |
518 |
Q |
| |
|
|||||||| ||||| |||||||| ||||| |||||||||||| | || || ||||||||||| |||| || || | |||||||||||| |||| |||| |
|
|
| T |
17130796 |
ccttcaatttgattatatcccttggcaactaaacgtgctttgtacctatcaatggaaccatcagcattgtgcttgactttgtaaacccatctgcacccta |
17130697 |
T |
|
| Q |
519 |
ttggttt |
525 |
Q |
| |
|
| ||||| |
|
|
| T |
17130696 |
taggttt |
17130690 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 2006083 - 2006043
Alignment:
| Q |
167 |
agcttctcataccactttctgctagcttgctttaatccata |
207 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
2006083 |
agcttttcataccactttctgctagcttgctttaaaccata |
2006043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 320
Target Start/End: Original strand, 23166285 - 23166436
Alignment:
| Q |
169 |
cttctcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaacttgatttggtttggatgttttaacacctggaggaagt |
268 |
Q |
| |
|
|||||||||||||||||| || ||||| ||||| ||||| ||||||||| | | ||||| |||||||| |||| || | ||| | ||| ||||||| |
|
|
| T |
23166285 |
cttctcataccactttctactggcttgttttaaaccataaagagatttagttaacttgcagacttgattgagtttagaagatttgataccaggaggaacc |
23166384 |
T |
|
| Q |
269 |
tacatgtacacattttcttgcaagtcgccatgaagaaaagcattattgacat |
320 |
Q |
| |
|
||| ||||||| |||||| || || ||||| | ||| ||||||||||||| |
|
|
| T |
23166385 |
atcatatacacatcttcttgtaaatctccatgcaaaaaggcattattgacat |
23166436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 13989304 - 13989234
Alignment:
| Q |
173 |
tcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaacttgatttggttt |
243 |
Q |
| |
|
|||||||| |||||||| ||||||||||| ||||| ||||| || | || ||| || |||||||||||||| |
|
|
| T |
13989304 |
tcataccattttctgctggcttgctttaaaccataaagagacttcaacaatttacacacttgatttggttt |
13989234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 460
Target Start/End: Original strand, 19803432 - 19803473
Alignment:
| Q |
419 |
ccttcaatctgattgtatcccttagcaaccaaacgtgctttg |
460 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||||| |||| |
|
|
| T |
19803432 |
ccttcaatttgattgtatcccttagcaactaaacgtgatttg |
19803473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 22644819 - 22644747
Alignment:
| Q |
164 |
gtgagcttctcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaacttgat |
236 |
Q |
| |
|
||||||||||||||||||| ||||| || ||||| || ||||| || ||||| ||| |||||||||||||| |
|
|
| T |
22644819 |
gtgagcttctcataccactgcctgcttgcctgcttcaaaccataaagggatttcttcaatttgcaaacttgat |
22644747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0257 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0257
Description:
Target: scaffold0257; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 585
Target Start/End: Complemental strand, 8118 - 7690
Alignment:
| Q |
160 |
tgaagtgagcttctcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaacttgatttggtttggatgttttaacacct |
259 |
Q |
| |
|
||||||||| || ||| ||||||||||||| || || || | ||||| |||||||| || || |||||||| |||||||||||||| ||| |||||||| |
|
|
| T |
8118 |
tgaagtgagtttttcagaccactttctgcttgcctgtttaagaccataaagagatttcatgagcttgcaaacctgatttggtttggaggttgtaacacct |
8019 |
T |
|
| Q |
260 |
ggaggaagttacatgtacacattttcttgcaagtcgccatgaagaaaagcattattgacat---attgatggataaaccaatggtgaatggatgccaaag |
356 |
Q |
| |
|
|||| | ||| || |||| ||| || ||||| |||||||| || |||||||| |||| ||||| ||| ||||| || || || || |||| |
|
|
| T |
8018 |
tgaggtacaatcatatagacatcttcctgtaagtcaccatgaaggaatgcattattcacatcaagctgatgaatatgccaattgttgattgaggctaaag |
7919 |
T |
|
| Q |
357 |
caataatgagtatgacagtcgtaagcttagctacaggtgagtatgtgtcctagtaattcaaaccttcaatctgattgtatcccttagcaaccaaacgtgc |
456 |
Q |
| |
|
|||| || | | || || || |||||||| |||||||| || ||||| | || | | ||||||||||||||||| ||||| ||||| | | ||| |
|
|
| T |
7918 |
caatgatagttctcactgtagtgagcttagccacaggtgaataagtgtcaaaatagtcaagtccttcaatctgattgtaacccttggcaacaagtcttgc |
7819 |
T |
|
| Q |
457 |
tttgaatctttctatggaaccatctgcatgatgtttaatcttgtaaacccatatgcagcctattggtttgatgtttggaggtaaatcaacaagtttttaa |
556 |
Q |
| |
|
|| ||||||| || | ||||||||||||| ||| || || || | ||| |||| ||||| |||||||||| || |||||||| || ||||| || |
|
|
| T |
7818 |
cttatatctttcaatagttccatctgcatgatatttgattttatatatccacctgcatcctataggtttgatgtcaggtggtaaatccaccagtttccaa |
7719 |
T |
|
| Q |
557 |
gtaccagtttgttcaagagctgtaagttc |
585 |
Q |
| |
|
|||||||| | |||||||||||||||||| |
|
|
| T |
7718 |
gtaccagtattttcaagagctgtaagttc |
7690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1416 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1416
Description:
Target: scaffold1416; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 419 - 527
Target Start/End: Original strand, 328 - 436
Alignment:
| Q |
419 |
ccttcaatctgattgtatcccttagcaaccaaacgtgctttgaatctttctatggaaccatctgcatgatgtttaatcttgtaaacccatatgcagccta |
518 |
Q |
| |
|
|||||||||||||| |||||||||||||| |||||||||||| || | || || || |||||| ||| ||| || | || ||||||||| |||| |||| |
|
|
| T |
328 |
ccttcaatctgattatatcccttagcaactaaacgtgctttgtatatctcaatagagccatctacattatgcttcactttataaacccatctgcacccta |
427 |
T |
|
| Q |
519 |
ttggtttga |
527 |
Q |
| |
|
| ||||||| |
|
|
| T |
428 |
taggtttga |
436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0329 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0329
Description:
Target: scaffold0329; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 422 - 577
Target Start/End: Complemental strand, 12205 - 12050
Alignment:
| Q |
422 |
tcaatctgattgtatcccttagcaaccaaacgtgctttgaatctttctatggaaccatctgcatgatgtttaatcttgtaaacccatatgcagcctattg |
521 |
Q |
| |
|
|||||||||||||| ||||| ||||| || | |||||| |||||| ||||||||||| ||||||| ||||| || |||| |||| | || || || | |
|
|
| T |
12205 |
tcaatctgattgtaaccctttgcaactaatctggctttgtgtctttcaatggaaccatcagcatgatatttaactttataaatccatctacatccaatgg |
12106 |
T |
|
| Q |
522 |
gtttgatgtttggaggtaaatcaacaagtttttaagtaccagtttgttcaagagct |
577 |
Q |
| |
|
||||||| || | |||||||||||||||| | |||||||||| ||||||||| |
|
|
| T |
12105 |
gtttgatattggatggtaaatcaacaagttgccaggtaccagttttctcaagagct |
12050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 94613 - 94683
Alignment:
| Q |
173 |
tcataccactttctgctagcttgctttaatccatagagagatttaatcagtttgcaaacttgatttggttt |
243 |
Q |
| |
|
|||||||| |||||||| ||||||||||| ||||| ||||| || | || ||| || |||||||||||||| |
|
|
| T |
94613 |
tcataccattttctgctggcttgctttaaaccataaagagacttcaacaatttacacacttgatttggttt |
94683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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