View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20876_high_10 (Length: 239)
Name: NF20876_high_10
Description: NF20876
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20876_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 30 - 173
Target Start/End: Original strand, 41772855 - 41772995
Alignment:
| Q |
30 |
agcaagacaaatcctcatcaccccattggttattttgttagatcgctcatctttctattagttgatgcattataaggttgagaagttagtagtctagtct |
129 |
Q |
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| T |
41772855 |
agcaagacaagtcctcatcaccccattggttattttgttagatcgctcatctttctattagttgatgcattataaggttgagaagttagtggtctagtct |
41772954 |
T |
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| Q |
130 |
aaatagttccaacagttagggatcagttagtaattacaatagta |
173 |
Q |
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| T |
41772955 |
aaatagttccaacagttaggg---agttagtaattacaatagta |
41772995 |
T |
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