View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20876_low_7 (Length: 254)

Name: NF20876_low_7
Description: NF20876
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20876_low_7
NF20876_low_7
[»] chr6 (13 HSPs)
chr6 (1-244)||(24751051-24751299)
chr6 (124-229)||(29355853-29355959)
chr6 (124-228)||(12221913-12222019)
chr6 (138-223)||(17432393-17432479)
chr6 (133-230)||(1347004-1347100)
chr6 (126-211)||(7947387-7947472)
chr6 (124-165)||(20400700-20400741)
chr6 (133-228)||(1354756-1354850)
chr6 (124-161)||(1941888-1941925)
chr6 (124-161)||(6024266-6024303)
chr6 (125-220)||(3815084-3815178)
chr6 (124-159)||(8409276-8409311)
chr6 (188-230)||(30786371-30786413)
[»] chr4 (42 HSPs)
chr4 (124-230)||(20639655-20639761)
chr4 (124-230)||(16408598-16408705)
chr4 (124-230)||(23501820-23501927)
chr4 (124-222)||(21489120-21489218)
chr4 (123-231)||(35567202-35567309)
chr4 (124-229)||(13256397-13256503)
chr4 (132-230)||(30639420-30639517)
chr4 (124-230)||(47443990-47444095)
chr4 (130-211)||(20908652-20908733)
chr4 (132-223)||(6430630-6430720)
chr4 (124-186)||(48327804-48327867)
chr4 (132-230)||(36816381-36816479)
chr4 (126-223)||(44363134-44363232)
chr4 (132-229)||(54175104-54175202)
chr4 (132-229)||(5648299-5648395)
chr4 (124-228)||(16911595-16911700)
chr4 (124-229)||(25629082-25629186)
chr4 (124-209)||(39029078-39029163)
chr4 (124-228)||(7038085-7038188)
chr4 (133-229)||(9832311-9832406)
chr4 (124-228)||(14983867-14983970)
chr4 (133-229)||(48598823-48598918)
chr4 (125-196)||(35894492-35894563)
chr4 (133-223)||(20225024-20225113)
chr4 (124-166)||(25343220-25343262)
chr4 (133-223)||(29207902-29207991)
chr4 (133-230)||(11054145-11054241)
chr4 (124-161)||(19027881-19027918)
chr4 (131-211)||(20405127-20405208)
chr4 (131-212)||(30581480-30581561)
chr4 (133-230)||(39077793-39077889)
chr4 (124-217)||(51865048-51865140)
chr4 (132-223)||(7909284-7909375)
chr4 (136-223)||(20225119-20225207)
chr4 (124-171)||(487190-487237)
chr4 (124-175)||(23580259-23580310)
chr4 (124-161)||(17043459-17043496)
chr4 (130-211)||(30690192-30690272)
chr4 (133-230)||(47528527-47528623)
chr4 (133-206)||(49796839-49796911)
chr4 (147-230)||(30352577-30352661)
chr4 (190-230)||(35532090-35532130)
[»] chr1 (42 HSPs)
chr1 (124-234)||(46247946-46248055)
chr1 (124-230)||(18944699-18944807)
chr1 (129-223)||(4349699-4349792)
chr1 (124-228)||(35005179-35005284)
chr1 (124-228)||(10668281-10668386)
chr1 (124-228)||(30395725-30395830)
chr1 (124-231)||(27201703-27201811)
chr1 (125-223)||(19932757-19932856)
chr1 (124-211)||(23768336-23768422)
chr1 (133-228)||(34725097-34725191)
chr1 (124-223)||(46991860-46991958)
chr1 (124-161)||(4430091-4430128)
chr1 (131-176)||(46859129-46859174)
chr1 (136-207)||(15505632-15505702)
chr1 (124-167)||(17470405-17470448)
chr1 (131-229)||(18741955-18742054)
chr1 (127-228)||(20004089-20004191)
chr1 (132-229)||(42304205-42304303)
chr1 (124-161)||(41319871-41319908)
chr1 (190-230)||(1517308-1517348)
chr1 (132-228)||(27474344-27474439)
chr1 (124-160)||(34679285-34679321)
chr1 (124-218)||(35117774-35117870)
chr1 (133-229)||(35253185-35253280)
chr1 (126-217)||(2435796-2435887)
chr1 (133-228)||(19414502-19414596)
chr1 (124-211)||(19701626-19701713)
chr1 (124-171)||(27136707-27136754)
chr1 (124-223)||(39214962-39215061)
chr1 (130-228)||(6983810-6983907)
chr1 (124-171)||(15511204-15511253)
chr1 (124-230)||(23796521-23796626)
chr1 (132-230)||(31382211-31382308)
chr1 (131-229)||(50812003-50812100)
chr1 (132-229)||(6358185-6358282)
chr1 (124-161)||(18724610-18724647)
chr1 (131-184)||(31442432-31442485)
chr1 (133-230)||(45812534-45812630)
chr1 (124-220)||(14617094-14617189)
chr1 (132-220)||(32632564-32632651)
chr1 (123-207)||(44485129-44485212)
chr1 (147-223)||(45402175-45402250)
[»] chr3 (42 HSPs)
chr3 (124-231)||(40272808-40272914)
chr3 (124-228)||(13628789-13628894)
chr3 (124-223)||(45786218-45786318)
chr3 (124-230)||(46421031-46421139)
chr3 (124-231)||(49013469-49013577)
chr3 (124-230)||(13730599-13730706)
chr3 (124-211)||(34420659-34420746)
chr3 (124-231)||(54374341-54374448)
chr3 (131-229)||(54484753-54484850)
chr3 (127-223)||(353353-353450)
chr3 (148-217)||(829452-829521)
chr3 (124-208)||(8247706-8247791)
chr3 (124-220)||(14987012-14987109)
chr3 (147-228)||(25517169-25517249)
chr3 (124-228)||(29366719-29366824)
chr3 (124-229)||(53996563-53996668)
chr3 (132-223)||(22609828-22609918)
chr3 (124-230)||(7943045-7943150)
chr3 (132-230)||(26869769-26869866)
chr3 (133-223)||(31592911-31593000)
chr3 (124-223)||(10795427-10795527)
chr3 (124-228)||(12914034-12914137)
chr3 (124-171)||(55401231-55401278)
chr3 (133-231)||(15797284-15797381)
chr3 (133-223)||(39203578-39203667)
chr3 (124-161)||(9276319-9276356)
chr3 (141-230)||(52926216-52926304)
chr3 (133-229)||(1217152-1217247)
chr3 (125-161)||(4495729-4495765)
chr3 (133-229)||(34771362-34771457)
chr3 (126-161)||(26573184-26573219)
chr3 (133-223)||(22122921-22123010)
chr3 (164-230)||(24851298-24851364)
chr3 (131-165)||(33235594-33235628)
chr3 (190-231)||(4495672-4495713)
chr3 (128-161)||(31904922-31904955)
chr3 (124-161)||(52428542-52428579)
chr3 (124-161)||(54032624-54032661)
chr3 (132-228)||(16735503-16735598)
chr3 (124-160)||(39212045-39212081)
chr3 (190-230)||(40390361-40390401)
chr3 (190-230)||(47624219-47624259)
[»] chr8 (34 HSPs)
chr8 (124-228)||(39460993-39461098)
chr8 (125-223)||(33866983-33867083)
chr8 (124-231)||(35261712-35261818)
chr8 (124-229)||(28817624-28817728)
chr8 (124-221)||(44530182-44530278)
chr8 (124-228)||(36720829-36720932)
chr8 (124-223)||(17823609-17823707)
chr8 (124-230)||(20869956-20870063)
chr8 (131-228)||(12625930-12626026)
chr8 (124-230)||(6760855-6760962)
chr8 (124-230)||(7136524-7136631)
chr8 (124-171)||(14018024-14018071)
chr8 (132-223)||(45071305-45071395)
chr8 (124-222)||(5689664-5689761)
chr8 (128-221)||(16225056-16225150)
chr8 (125-211)||(29877128-29877213)
chr8 (124-229)||(5135288-5135391)
chr8 (125-229)||(25250556-25250661)
chr8 (126-171)||(44742574-44742619)
chr8 (124-211)||(17250891-17250979)
chr8 (132-223)||(13160742-13160832)
chr8 (131-221)||(20284075-20284166)
chr8 (131-221)||(21070703-21070794)
chr8 (124-230)||(8897761-8897866)
chr8 (124-222)||(29521690-29521787)
chr8 (133-230)||(12670247-12670343)
chr8 (132-229)||(18164758-18164854)
chr8 (131-161)||(2626562-2626592)
chr8 (131-228)||(26954173-26954271)
chr8 (176-230)||(27468089-27468143)
chr8 (124-161)||(8484003-8484040)
chr8 (133-230)||(30454094-30454190)
chr8 (166-223)||(36486570-36486627)
chr8 (175-230)||(950591-950646)
[»] chr5 (24 HSPs)
chr5 (125-230)||(24448924-24449028)
chr5 (124-228)||(38879614-38879719)
chr5 (124-220)||(16880654-16880749)
chr5 (124-208)||(27328785-27328870)
chr5 (124-228)||(4619103-4619208)
chr5 (124-223)||(13801771-13801871)
chr5 (124-223)||(20135637-20135737)
chr5 (132-211)||(7097776-7097854)
chr5 (131-229)||(43334243-43334341)
chr5 (124-228)||(28516432-28516536)
chr5 (133-228)||(32703464-32703558)
chr5 (124-218)||(43574639-43574732)
chr5 (142-211)||(12477136-12477205)
chr5 (133-229)||(8169982-8170077)
chr5 (124-228)||(29334428-29334532)
chr5 (148-223)||(12575664-12575739)
chr5 (132-218)||(208936-209022)
chr5 (124-166)||(22187318-22187360)
chr5 (125-207)||(22600488-22600569)
chr5 (124-166)||(42924894-42924936)
chr5 (151-228)||(16957374-16957450)
chr5 (133-230)||(35710353-35710449)
chr5 (192-228)||(39801616-39801652)
chr5 (125-161)||(41425982-41426018)
[»] chr2 (26 HSPs)
chr2 (124-223)||(10543731-10543831)
chr2 (124-228)||(8455315-8455418)
chr2 (131-230)||(10546203-10546301)
chr2 (126-223)||(25632544-25632640)
chr2 (124-223)||(14530351-14530451)
chr2 (133-228)||(9671221-9671315)
chr2 (124-231)||(17623597-17623703)
chr2 (133-230)||(36871534-36871629)
chr2 (124-211)||(19615025-19615112)
chr2 (134-230)||(25249735-25249830)
chr2 (124-231)||(17668035-17668141)
chr2 (124-228)||(24200622-24200727)
chr2 (124-161)||(32781353-32781390)
chr2 (132-230)||(14444769-14444866)
chr2 (131-217)||(26684630-26684715)
chr2 (133-230)||(25641543-25641639)
chr2 (131-223)||(25079721-25079812)
chr2 (124-174)||(7214567-7214618)
chr2 (124-207)||(21377093-21377175)
chr2 (133-228)||(21779260-21779354)
chr2 (131-217)||(17471589-17471675)
chr2 (124-161)||(23145763-23145800)
chr2 (124-161)||(23557553-23557590)
chr2 (125-228)||(5841062-5841166)
chr2 (130-182)||(12315697-12315748)
chr2 (131-211)||(24890451-24890530)
[»] chr7 (36 HSPs)
chr7 (124-223)||(11617592-11617690)
chr7 (124-230)||(7879671-7879776)
chr7 (124-218)||(21566468-21566562)
chr7 (127-220)||(35334823-35334915)
chr7 (124-229)||(42805557-42805663)
chr7 (124-220)||(2541026-2541121)
chr7 (124-223)||(47716492-47716592)
chr7 (125-203)||(14099030-14099107)
chr7 (125-203)||(14409047-14409124)
chr7 (128-230)||(17048812-17048914)
chr7 (124-166)||(22699030-22699072)
chr7 (124-161)||(23419739-23419776)
chr7 (133-230)||(42391097-42391193)
chr7 (124-184)||(16341311-16341371)
chr7 (124-230)||(43557505-43557613)
chr7 (133-228)||(21172008-21172102)
chr7 (128-217)||(14732831-14732920)
chr7 (124-230)||(19426887-19426991)
chr7 (133-230)||(32758301-32758397)
chr7 (124-229)||(42798702-42798806)
chr7 (124-161)||(46354227-46354264)
chr7 (124-216)||(25434052-25434144)
chr7 (132-208)||(38604567-38604642)
chr7 (124-167)||(7644989-7645032)
chr7 (125-223)||(18747520-18747618)
chr7 (133-228)||(31591108-31591202)
chr7 (134-229)||(39093437-39093532)
chr7 (124-230)||(1408490-1408595)
chr7 (127-229)||(13792148-13792250)
chr7 (123-161)||(19266482-19266520)
chr7 (147-233)||(27889310-27889395)
chr7 (132-230)||(34626205-34626302)
chr7 (124-158)||(35203472-35203506)
chr7 (133-223)||(48735126-48735215)
chr7 (124-229)||(27629667-27629771)
chr7 (190-230)||(36602545-36602585)
[»] scaffold0057 (2 HSPs)
scaffold0057 (124-230)||(24769-24874)
scaffold0057 (124-230)||(46864-46969)
[»] scaffold0049 (1 HSPs)
scaffold0049 (124-223)||(59010-59110)
[»] scaffold0311 (1 HSPs)
scaffold0311 (124-222)||(10843-10940)
[»] scaffold0015 (1 HSPs)
scaffold0015 (133-228)||(48633-48727)
[»] scaffold0168 (1 HSPs)
scaffold0168 (133-229)||(30619-30714)
[»] scaffold0187 (2 HSPs)
scaffold0187 (133-223)||(10054-10143)
scaffold0187 (133-223)||(20382-20471)


Alignment Details
Target: chr6 (Bit Score: 189; Significance: 1e-102; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 24751299 - 24751051
Alignment:
Q  1 ttaaagtttttgtatatagcaatttgataaaagtatgtctatcaatcacctatagaacggataaaatcaataaactattttacattttgctgagactaaa 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24751299 ttaaagtttttgtatatagaaatttgataaaagtatgtctatcaatcacctatagaacggataaaatcaataaactattttacattttgctgagactaaa 24751200  T
Q  101 tacaaatttaattctttttattacttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgc-- 198  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||| |||| |||||||||||      
T  24751199 tacaaatttaattctttttattacttgtgtaaaaaatagggtaagactgcgtacaatacactaaaatggtgagaccccttcacgaaccgtgcgtatgcgt 24751100  T
Q  199 ---aggagctttagtgaaccgggttgccattttttactatattcttgga 244  Q
       || |||||||||| ||||||||||||||||||||||| || |||||    
T  24751099 atgagcagctttagtgcaccgggttgccattttttactatttttttgga 24751051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 124 - 229
Target Start/End: Complemental strand, 29355959 - 29355853
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    ||||||||| |||||||||||| ||||||||||||||| || ||||||| |||  ||||||| | | ||||||||| |||||||||||| ||||||||||    
T  29355959 cttgtgtaagaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgc 29355860  T
Q  223 cattttt 229  Q
    | |||||    
T  29355859 ccttttt 29355853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 12222019 - 12221913
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagc-tttagtgaaccgggttg 221  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||||| |||  ||||||| | | ||||||||| ||||| ||||||| |||||||||    
T  12222019 cttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagcttttagtgcaccgggttg 12221920  T
Q  222 ccatttt 228  Q
    || ||||    
T  12221919 ccctttt 12221913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 223
Target Start/End: Original strand, 17432393 - 17432479
Alignment:
Q  138 agggtaagactgcgtacaatacactaaaa-tggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    |||||||| ||| |||||||||||||||| ||||||||| | |||||| ||| || | |||| |||||||||||| |||||||||||    
T  17432393 agggtaaggctgtgtacaatacactaaaaatggtgagaccttttcccggatcctgtgcatgcgggagctttagtgcaccgggttgcc 17432479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 230
Target Start/End: Original strand, 1347004 - 1347100
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttttt 230  Q
    ||||||||||||| |||||||||||||||  |||||||| |||  ||||||| | | ||| ||||| |||||| ||||| ||||||||||| ||||||    
T  1347004 aaaacagggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttttt 1347100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 7947472 - 7947387
Alignment:
Q  126 tgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtg 211  Q
    |||||||||| ||||||||| ||||||||||||||| ||||||||| | |  ||||||| | | ||||||||  ||||||||||||    
T  7947472 tgtgtaaaaaccagggtaaggctgcgtacaatacaccaaaatggtgggcccccttcccggaccttgcgtatgtgggagctttagtg 7947387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 165
Target Start/End: Original strand, 20400700 - 20400741
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaa 165  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  20400700 cttgtgtaaaaaacagggtaagactgcgtacagtacactaaa 20400741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 1354850 - 1354756
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttt 228  Q
    ||||||||||||| |||||||||||||||  |||||||| |||  ||||||| | | ||| ||||| |||||| ||||| ||||||||||| ||||    
T  1354850 aaaacagggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 1354756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 161
Target Start/End: Original strand, 1941888 - 1941925
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacac 161  Q
    |||||||||||||||||||||| |||||||||||||||    
T  1941888 cttgtgtaaaaaacagggtaaggctgcgtacaatacac 1941925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 161
Target Start/End: Original strand, 6024266 - 6024303
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacac 161  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  6024266 cttgtgtaaaaaacatggtaagactgcgtacaatacac 6024303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 220
Target Start/End: Complemental strand, 3815178 - 3815084
Alignment:
Q  125 ttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggtt 220  Q
    |||||||||||| | |||| |||||||||||||||||  |||||||| |||   |||||||| | | ||||||| | |||||||||| ||||||||    
T  3815178 ttgtgtaaaaaatatggtacgactgcgtacaatacac-caaatggtgggaccctttcccgaaccctacgtatgcggaagctttagtgcaccgggtt 3815084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 159
Target Start/End: Original strand, 8409276 - 8409311
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatac 159  Q
    |||||||||||||||||||||| |||||||||||||    
T  8409276 cttgtgtaaaaaacagggtaaggctgcgtacaatac 8409311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 230
Target Start/End: Complemental strand, 30786413 - 30786371
Alignment:
Q  188 cgtgcgtatgcaggagctttagtgaaccgggttgccatttttt 230  Q
    ||||||||||| |||||||||||| ||||||||||| ||||||    
T  30786413 cgtgcgtatgcgggagctttagtgcaccgggttgccttttttt 30786371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 124 - 230
Target Start/End: Complemental strand, 20639761 - 20639655
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||| |||  ||||||| | | ||||||||| |||||||||||| |||||||||||    
T  20639761 cttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcc 20639662  T
Q  224 atttttt 230  Q
     ||||||    
T  20639661 ctttttt 20639655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 230
Target Start/End: Complemental strand, 16408705 - 16408598
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||  ||  ||||||| | |  || ||||| |||||||||||| ||||||||||    
T  16408705 cttgtgtaaaaaacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgc 16408606  T
Q  223 catttttt 230  Q
    | ||||||    
T  16408605 cctttttt 16408598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 230
Target Start/End: Original strand, 23501820 - 23501927
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    ||||||||||||||||||||||  |||||||||||||| || ||||||| |||  ||||||| | | ||| ||||| |||||||||||| ||||||||||    
T  23501820 cttgtgtaaaaaacagggtaaggttgcgtacaatacaccaataatggtgggaccccttcccggaccctgcatatgcgggagctttagtgcaccgggttgc 23501919  T
Q  223 catttttt 230  Q
    | ||||||    
T  23501920 cctttttt 23501927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 222
Target Start/End: Original strand, 21489120 - 21489218
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    |||| ||||||||||| ||||||||||||||||| ||| ||||||||| |||  ||||||||| | ||||||||| |||||||| ||| || |||||||    
T  21489120 cttgcgtaaaaaacagagtaagactgcgtacaatgcaccaaaatggtgggaccccttcccgaaccctgcgtatgcgggagctttcgtgcactgggttgc 21489218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 231
Target Start/End: Original strand, 35567202 - 35567309
Alignment:
Q  123 acttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    ||||||||||||||||||||||| ||| |||||| |||| ||| ||||| |||  ||||||||| | ||||| ||| |||||||||||| |||||| |||    
T  35567202 acttgtgtaaaaaacagggtaaggctgtgtacaacacaccaaa-tggtgggaccccttcccgaaccctgcgtctgcgggagctttagtgcaccgggctgc 35567300  T
Q  223 catttttta 231  Q
    | |||||||    
T  35567301 cctttttta 35567309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 229
Target Start/End: Complemental strand, 13256503 - 13256397
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    |||||||||||||||||||||| ||||||||||||||| || ||| ||| |||  ||||||||| |  || | ||| |||||||||||| ||||||||||    
T  13256503 cttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatagtgggaccccttcccgaaccccgcatctgcgggagctttagtgcaccgggttgc 13256404  T
Q  223 cattttt 229  Q
    | |||||    
T  13256403 ccttttt 13256397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 230
Target Start/End: Original strand, 30639420 - 30639517
Alignment:
Q  132 aaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttttt 230  Q
    |||||||||||||| ||||||||||||||| ||| |||||||||  ||||||| | | ||| ||||| |||||||||||| || |||||||| ||||||    
T  30639420 aaaaacagggtaaggctgcgtacaatacaccaaa-tggtgagaccccttcccggaccctgcatatgcgggagctttagtgcactgggttgccctttttt 30639517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 230
Target Start/End: Original strand, 47443990 - 47444095
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    |||| ||||||||||||||||| |||||||||||||||  |||||||| |||  ||||||| | | ||| ||||||||||||| |||| || ||||||||    
T  47443990 cttgcgtaaaaaacagggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggaccctgcatatgcaggagcttcagtgcactgggttgcc 47444088  T
Q  224 atttttt 230  Q
     ||||||    
T  47444089 ctttttt 47444095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 20908733 - 20908652
Alignment:
Q  130 taaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtg 211  Q
    ||||||| | |||||| ||||||||||||||| ||||||||| |||  ||||||||| | ||||||||| ||||||||||||    
T  20908733 taaaaaagaaggtaaggctgcgtacaatacaccaaaatggtgggaccccttcccgaaccctgcgtatgcgggagctttagtg 20908652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 223
Target Start/End: Complemental strand, 6430720 - 6430630
Alignment:
Q  132 aaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    |||||||||||||| |||||||||||||||  |||||||| |||  ||||||| | | ||||||||| |||||||||| | |||||||||||    
T  6430720 aaaaacagggtaaggctgcgtacaatacac-caaatggtgggaccacttcccggaccctgcgtatgcgggagctttagcgcaccgggttgcc 6430630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 186
Target Start/End: Complemental strand, 48327867 - 48327804
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaa 186  Q
    ||||||||||||||||||||||||||| |||||||||| || ||||||| ||| ||||||||||    
T  48327867 cttgtgtaaaaaacagggtaagactgcatacaatacaccaataatggtgggacctcttcccgaa 48327804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 230
Target Start/End: Complemental strand, 36816479 - 36816381
Alignment:
Q  132 aaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttttt 230  Q
    |||||||||| | | ||||||||||||||| |||| |||| |||| ||||| | | | || |||||| |||||||||||| ||||||||||| ||||||    
T  36816479 aaaaacagggcagggctgcgtacaatacaccaaaaaggtgggactccttcctggaccctgtgtatgcgggagctttagtgtaccgggttgccctttttt 36816381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 223
Target Start/End: Complemental strand, 44363232 - 44363134
Alignment:
Q  126 tgtgtaaaaaacagggtaagactgcgtacaatacactaaaa-tggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    |||||||||||||||||| | ||||||||||  ||| |||| ||||| |||  ||||||| | | ||||||||| |||||||||||| |||||||||||    
T  44363232 tgtgtaaaaaacagggtagggctgcgtacaacgcaccaaaaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcc 44363134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 229
Target Start/End: Original strand, 54175104 - 54175202
Alignment:
Q  132 aaaaacagggtaagactgcgtacaatacactaaaatggtgagacttctt-cccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccattttt 229  Q
    |||||||||||||| ||||||||||||||| ||||||||| |||  ||| |||| | | ||| ||||| |||||||||||| |||||| |||| |||||    
T  54175104 aaaaacagggtaaggctgcgtacaatacaccaaaatggtgggaccccttccccggaccctgcatatgcgggagctttagtgcaccgggctgcccttttt 54175202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 229
Target Start/End: Original strand, 5648299 - 5648395
Alignment:
Q  132 aaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccattttt 229  Q
    |||||||||||||| |||||||||||||||  |||||||| |||  ||||||| | | ||||||||| ||||||| |||| || |||||||| |||||    
T  5648299 aaaaacagggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggaccctgcgtatgcgggagcttcagtgcactgggttgcccttttt 5648395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 16911595 - 16911700
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    |||||||| ||| ||||||||| ||||||||||||||| || ||||||| |||  ||||||| | | |||||| || |||||||||||  ||||||||||    
T  16911595 cttgtgtacaaatcagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtacgcgggagctttagtttaccgggttgc 16911694  T
Q  223 catttt 228  Q
    | ||||    
T  16911695 cctttt 16911700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 229
Target Start/End: Original strand, 25629082 - 25629186
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    ||||||||||||| |||||||| ||| |||||||||||  |||||||| |||  ||||||| | | | | ||||| |||||||||||| |||||||||||    
T  25629082 cttgtgtaaaaaatagggtaaggctgtgtacaatacac-caaatggtgggaccccttcccggaccctacatatgcgggagctttagtgcaccgggttgcc 25629180  T
Q  224 attttt 229  Q
     |||||    
T  25629181 cttttt 25629186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 209
Target Start/End: Complemental strand, 39029163 - 39029078
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttag 209  Q
    |||||||||||||||||||||| ||| ||||||||||| ||||||||| |||  ||| ||| | | ||| ||||| ||||||||||    
T  39029163 cttgtgtaaaaaacagggtaaggctgtgtacaatacacgaaaatggtgggaccactttccggaccctgcatatgcgggagctttag 39029078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 7038085 - 7038188
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    ||||||||||||| ||||||||||| |||||||||||| ||||||||| | |  || |||| | | ||||||| | |||||||||||| || ||||||||    
T  7038085 cttgtgtaaaaaatagggtaagacttcgtacaatacaccaaaatggtggggcacctacccggaccctgcgtatac-ggagctttagtgcactgggttgcc 7038183  T
Q  224 atttt 228  Q
     ||||    
T  7038184 ctttt 7038188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 229
Target Start/End: Complemental strand, 9832406 - 9832311
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccattttt 229  Q
    ||||||||||||| |||||||||||||||  |||||||| |||  ||||||| | | ||| ||||||||| || ||||| ||||||||||| |||||    
T  9832406 aaaacagggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggaccctgcatatgcaggaactctagtgcaccgggttgcccttttt 9832311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 14983867 - 14983970
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    ||||||||||||| ||||||||  ||| ||||||||||| |||||||| |||  ||||||| | | ||||||||| |||||||||||| |||  ||||||    
T  14983867 cttgtgtaaaaaatagggtaaggttgcctacaatacact-aaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgtaccatgttgcc 14983965  T
Q  224 atttt 228  Q
     ||||    
T  14983966 ctttt 14983970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 229
Target Start/End: Complemental strand, 48598918 - 48598823
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccattttt 229  Q
    ||||||||||||| |||||||||||||||  |||||||| |||  ||||||| | | ||| ||||| |||||| ||||| ||||||||||| |||||    
T  48598918 aaaacagggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggaccatgcatatgccggagctctagtgcaccgggttgcccttttt 48598823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 35894563 - 35894492
Alignment:
Q  125 ttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtat 196  Q
    |||||||||||||| ||||||  |||||||||||||| ||||||||| |||  ||||||| ||| |||||||    
T  35894563 ttgtgtaaaaaacacggtaagtgtgcgtacaatacaccaaaatggtgggaccccttcccggatcatgcgtat 35894492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 223
Target Start/End: Original strand, 20225024 - 20225113
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    ||||||||||||| |||||||||||||||  |||||||| |||  ||||||| | | ||| ||||| |||||| ||||| |||||||||||    
T  20225024 aaaacagggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcc 20225113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 25343220 - 25343262
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaa 166  Q
    |||||||||||||||||||||| ||||||||||||||| ||||    
T  25343220 cttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaa 25343262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 223
Target Start/End: Complemental strand, 29207991 - 29207902
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    ||||||||||||| |||||||||||||||  |||||||| |||  ||||||| | | ||| ||||| |||||| ||||| |||||||||||    
T  29207991 aaaacagggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcc 29207902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 230
Target Start/End: Complemental strand, 11054241 - 11054145
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttttt 230  Q
    |||||||||||||||||||||||||||||  |||||| |  ||  ||||||| | | ||| ||||| |||||| ||||| ||||||||||| ||||||    
T  11054241 aaaacagggtaagactgcgtacaatacac-caaatggcggaaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttttt 11054145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 161
Target Start/End: Original strand, 19027881 - 19027918
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacac 161  Q
    |||||||||||||||||||||| |||||||||||||||    
T  19027881 cttgtgtaaaaaacagggtaaggctgcgtacaatacac 19027918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 20405127 - 20405208
Alignment:
Q  131 aaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtg 211  Q
    |||||||||||||||| ||||||||||||||||| ||||||| |||  ||||||| | |  || ||||| ||||||||||||    
T  20405127 aaaaaacagggtaagattgcgtacaatacactaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtg 20405208  T

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Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 212
Target Start/End: Complemental strand, 30581561 - 30581480
Alignment:
Q  131 aaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtga 212  Q
    |||||||||||||||  || ||||||||||| ||||||||| |||  ||||||| | | ||| |||| ||||||||||||||    
T  30581561 aaaaaacagggtaagggtgtgtacaatacaccaaaatggtgggaccccttcccggaccctgcatatgtaggagctttagtga 30581480  T

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Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 230
Target Start/End: Complemental strand, 39077889 - 39077793
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttttt 230  Q
    |||||||||||||  ||||||||||| || ||| ||||||||| |||| ||| | | ||| ||||| |||||| ||||| ||||||||||| ||||||    
T  39077889 aaaacagggtaaggttgcgtacaatataccaaa-tggtgagacatctttccggaccctgcatatgcgggagctctagtgcaccgggttgccttttttt 39077793  T

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Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 217
Target Start/End: Complemental strand, 51865140 - 51865048
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgg 217  Q
    ||||||||||||||| |||||| |||||||||||||||  |||||||| | |  ||||||| | | ||||||||| ||||||||| || |||||    
T  51865140 cttgtgtaaaaaacatggtaaggctgcgtacaatacac-caaatggtggggccccttcccggaccctgcgtatgcgggagctttattgcaccgg 51865048  T

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Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 223
Target Start/End: Complemental strand, 7909375 - 7909284
Alignment:
Q  132 aaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgc-aggagctttagtgaaccgggttgcc 223  Q
    ||||||||||||||  ||||||||||||||  |||||||| |||  ||||||||| | |||||||||  |||||||||||| | |||||||||    
T  7909375 aaaaacagggtaaggttgcgtacaatacac-caaatggtgggaccccttcccgaaccctgcgtatgcggggagctttagtgcatcgggttgcc 7909284  T

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Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 223
Target Start/End: Original strand, 20225119 - 20225207
Alignment:
Q  136 acagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    |||||||||| ||||||||||||||| || ||||||| |||  ||||||| | |  || ||||| |||||||||||| |||||||||||    
T  20225119 acagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgcc 20225207  T

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Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 171
Target Start/End: Complemental strand, 487237 - 487190
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtg 171  Q
    |||||||| |||||| |||||  |||||||||||||||||||||||||    
T  487237 cttgtgtataaaacaaggtaaagctgcgtacaatacactaaaatggtg 487190  T

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Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 175
Target Start/End: Complemental strand, 23580310 - 23580259
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagac 175  Q
    |||||||||||||||||| |||||||||||  |||||| ||||||| |||||    
T  23580310 cttgtgtaaaaaacaggggaagactgcgtaggatacaccaaaatggcgagac 23580259  T

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Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 161
Target Start/End: Complemental strand, 17043496 - 17043459
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacac 161  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  17043496 cttgtgtaaaatacagggtaaggctgcgtacaatacac 17043459  T

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Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 30690272 - 30690192
Alignment:
Q  130 taaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtg 211  Q
    |||||||||||||||| |||| ||||||||||  || ||||| |||  ||||||| | | ||||||||| ||||||||||||    
T  30690272 taaaaaacagggtaaggctgcatacaatacac-caattggtgggaccccttcccggaccctgcgtatgcgggagctttagtg 30690192  T

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Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 230
Target Start/End: Complemental strand, 47528623 - 47528527
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttttt 230  Q
    ||||||||||||| |||||||||||||||  |||||||| |||  ||||||| | | ||  ||||  |||||| ||||| ||||||||||| ||||||    
T  47528623 aaaacagggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggaccctgaatatgtgggagctctagtgcaccgggttgccctttttt 47528527  T

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Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 206
Target Start/End: Original strand, 49796839 - 49796911
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctt 206  Q
    |||||| |||||| |||||||||||||||  |||||||| |||  ||||||||| | ||||||||| |||||||    
T  49796839 aaaacatggtaaggctgcgtacaatacac-caaatggtgggaccccttcccgaaccctgcgtatgcgggagctt 49796911  T

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Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 30352661 - 30352577
Alignment:
Q  147 ctgcgtacaatacactaaaa-tggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttttt 230  Q
    ||||||||||||||| |||| ||||| |||  |||| || | | ||||||||| |||||||||||| |||| |||||| ||||||    
T  30352661 ctgcgtacaatacaccaaaaatggtgggaccccttctcggaccctgcgtatgcgggagctttagtgcaccgtgttgccctttttt 30352577  T

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Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 230
Target Start/End: Original strand, 35532090 - 35532130
Alignment:
Q  190 tgcgtatgcaggagctttagtgaaccgggttgccatttttt 230  Q
    ||||||||| |||||||||||| ||||||||||| ||||||    
T  35532090 tgcgtatgcgggagctttagtgcaccgggttgccctttttt 35532130  T

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Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 46248055 - 46247946
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||| |||  ||||||| | | ||||||||| |||||||||||| |||||||||||    
T  46248055 cttgtgtaaaaaacagggtaagactgcgtacaatacac-caaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgtaccgggttgcc 46247957  T
Q  224 attttttacta 234  Q
     ||||||||||    
T  46247956 cttttttacta 46247946  T

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Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 230
Target Start/End: Original strand, 18944699 - 18944807
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagc-tttagtgaaccgggttg 221  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||||| |||  ||||||| | | ||||||||| ||||| ||||||| |||||||||    
T  18944699 cttgtgtaaaaaacagggtaaggctgcgtacaatacaccaacaatggtgggaccccttcccggaccctgcgtatgcgggagcttttagtgcaccgggttg 18944798  T
Q  222 ccatttttt 230  Q
    || ||||||    
T  18944799 ccctttttt 18944807  T

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Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 4349699 - 4349792
Alignment:
Q  129 gtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    ||||||||||||||||| |||||||||||||||  |||||||| |||  ||||||| | | ||||||||| |||||||||||| |||||||||||    
T  4349699 gtaaaaaacagggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcc 4349792  T

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Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 35005179 - 35005284
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    |||||||||||||||||||||| |||| ||||||||| | ||||||||| |||  ||||||| | | ||||||||| || ||||||||| ||||||||||    
T  35005179 cttgtgtaaaaaacagggtaaggctgcatacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgcgggcgctttagtgcaccgggttgc 35005278  T
Q  223 catttt 228  Q
    | ||||    
T  35005279 cctttt 35005284  T

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Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 10668281 - 10668386
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    ||||||||||||||| ||||||  |||||||||||||| || ||||||| |||  |||||||   | ||||||||| |||||||||||| ||||||||||    
T  10668281 cttgtgtaaaaaacaaggtaaggttgcgtacaatacaccaataatggtgggaccccttcccggtccctgcgtatgcgggagctttagtgcaccgggttgc 10668380  T
Q  223 catttt 228  Q
    | ||||    
T  10668381 cctttt 10668386  T

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Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 30395830 - 30395725
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||||| |||  ||||||| | |  || ||||| |||||||||||| |||| |||||    
T  30395830 cttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgagttgc 30395731  T
Q  223 catttt 228  Q
    | ||||    
T  30395730 cctttt 30395725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 27201703 - 27201811
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    ||||||| | |||||||||||| |||||||||||||| | ||||||||| |||  ||||||| | | ||||||||| |||||||||||| |  |||||||    
T  27201703 cttgtgtcagaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccttgcgtatgcgggagctttagtgcattgggttgc 27201802  T
Q  223 catttttta 231  Q
    | |||||||    
T  27201803 cctttttta 27201811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 223
Target Start/End: Complemental strand, 19932856 - 19932757
Alignment:
Q  125 ttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    ||||||||||||||||||||| |||||||||||||| | ||||||||| |||  ||||||| | | |||||||||| || | |||||| ||| |||||||    
T  19932856 ttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgcaagatcattagtgcaccaggttgcc 19932757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 211
Target Start/End: Complemental strand, 23768422 - 23768336
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtg 211  Q
    |||||||||||||||||||||| |||||||||||||||  |||||||| |||  ||||||  | | ||||||||| ||||||||||||    
T  23768422 cttgtgtaaaaaacagggtaaggctgcgtacaatacac-caaatggtgggacaccttcccagaccctgcgtatgcgggagctttagtg 23768336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 34725191 - 34725097
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttt 228  Q
    ||||||||||||| |||||||||||||||| |||||||| |||  ||||||| | | ||| ||||| |||||| ||||| ||||||||||| ||||    
T  34725191 aaaacagggtaaggctgcgtacaatacact-aaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 34725097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 223
Target Start/End: Original strand, 46991860 - 46991958
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    |||||||||||||||||||||| ||| |||||||||||   ||||||| |||  ||||||| | | ||||||||  |||||||||||| |||||||||||    
T  46991860 cttgtgtaaaaaacagggtaaggctgtgtacaatacac-cgaatggtgggaccccttcccggaccctgcgtatgtgggagctttagtgcaccgggttgcc 46991958  T

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Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 161
Target Start/End: Complemental strand, 4430128 - 4430091
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacac 161  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4430128 cttgtgtaaaaaacagggtaagactgcgtacaatacac 4430091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 46859129 - 46859174
Alignment:
Q  131 aaaaaacagggtaagactgcgtacaatacactaaaatggtgagact 176  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||    
T  46859129 aaaaaacagggtaagactgcgtacaatacaccaaaatggtgggact 46859174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 15505632 - 15505702
Alignment:
Q  136 acagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagcttt 207  Q
    ||||||||||||||||||||||||||  |||||||| |||  ||||||||| | ||||||||| ||||||||    
T  15505632 acagggtaagactgcgtacaatacac-caaatggtgggaccccttcccgaaccctgcgtatgcgggagcttt 15505702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 17470448 - 17470405
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaat 167  Q
    |||||||||||||||||||||| ||||||||||||||| |||||    
T  17470448 cttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaat 17470405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 229
Target Start/End: Complemental strand, 18742054 - 18741955
Alignment:
Q  131 aaaaaacagggtaagactgcgtacaataca-ctaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccattttt 229  Q
    ||||||||||||||| |||||||||||||| | ||||||||| |||  ||||||  | | |||||||||  ||||||||||| |||||||| || |||||    
T  18742054 aaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccagaccctgcgtatgcgagagctttagtgcaccgggtttcccttttt 18741955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 228
Target Start/End: Complemental strand, 20004191 - 20004089
Alignment:
Q  127 gtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccat 225  Q
    |||||||||||| |||||| ||||||||||||||| || ||||||| |||  ||||||  | |  || ||||| |||||||||||| ||||||||||| |    
T  20004191 gtgtaaaaaacaaggtaaggctgcgtacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccct 20004092  T
Q  226 ttt 228  Q
    |||    
T  20004091 ttt 20004089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 229
Target Start/End: Complemental strand, 42304303 - 42304205
Alignment:
Q  132 aaaaacagggtaagactgcgtacaatacactaaaa-tggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccattttt 229  Q
    ||||||||||||||  |||||||||||||| |||| ||||| |||  ||||||| | | ||||||||  |||||||||||| ||||| ||||| |||||    
T  42304303 aaaaacagggtaaggttgcgtacaatacacaaaaaatggtgggaccccttcccggaccctgcgtatgtgggagctttagtgcaccggattgcccttttt 42304205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 161
Target Start/End: Complemental strand, 41319908 - 41319871
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacac 161  Q
    |||||||||||||||||||||| |||||||||||||||    
T  41319908 cttgtgtaaaaaacagggtaaggctgcgtacaatacac 41319871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 230
Target Start/End: Complemental strand, 1517348 - 1517308
Alignment:
Q  190 tgcgtatgcaggagctttagtgaaccgggttgccatttttt 230  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
T  1517348 tgcgtatgcaggagctttagtgcaccgggttgccctttttt 1517308  T

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Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 228
Target Start/End: Original strand, 27474344 - 27474439
Alignment:
Q  132 aaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttt 228  Q
    |||||||||| ||  |||||||||||||||| || ||||| |||  ||||||| | | ||||||||| |||||||||||| ||||| ||||| ||||    
T  27474344 aaaaacagggcaaagctgcgtacaatacactgaa-tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccggattgccctttt 27474439  T

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Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 34679321 - 34679285
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaataca 160  Q
    ||||||||||||||||||||||||||||||| |||||    
T  34679321 cttgtgtaaaaaacagggtaagactgcgtactataca 34679285  T

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Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 35117870 - 35117774
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaaatggtgagacttcttcccgaatcgtgcgt-atgcaggagctttagtgaaccggg 218  Q
    ||||||||||| |||||||||| ||| |||||||||| | |||||| || |||  ||||||| | | ||||| ||||||||||||||||| ||||||    
T  35117870 cttgtgtaaaatacagggtaaggctgtgtacaatacaccaaaaatgatgggaccccttcccggaccctgcgtaatgcaggagctttagtgcaccggg 35117774  T

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Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 229
Target Start/End: Complemental strand, 35253280 - 35253185
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccattttt 229  Q
    ||||||||||||| |||||||||||||||  |||||||| |||  ||||||| | | ||| ||||| |||||| ||||| ||||| ||||| |||||    
T  35253280 aaaacagggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccggattgcccttttt 35253185  T

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Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 2435887 - 2435796
Alignment:
Q  126 tgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgg 217  Q
    ||||| ||||| |||||||| ||||||||||||||| ||||||||| |||  ||| ||| | | | || |||| |||||||||||| |||||    
T  2435887 tgtgtgaaaaatagggtaagcctgcgtacaatacaccaaaatggtgggacccctttccgtaccctccgcatgcgggagctttagtgcaccgg 2435796  T

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Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 228
Target Start/End: Original strand, 19414502 - 19414596
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttt 228  Q
    |||||||| |||| |||||||||||||||  |||||||| |||  ||||||| | | ||| ||||| |||||| ||||| ||||||||||| ||||    
T  19414502 aaaacaggttaaggctgcgtacaatacac-caaatggtgggaccccttcccgtaccctgcatatgcgggagctctagtgcaccgggttgccctttt 19414596  T

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Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 211
Target Start/End: Original strand, 19701626 - 19701713
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtg 211  Q
    ||||||||||||||  ||||||  || ||||||||||| ||||||||| | |  ||||||| | | ||||||||| ||||||||||||    
T  19701626 cttgtgtaaaaaacttggtaaggatgggtacaatacaccaaaatggtggggccccttcccggaccctgcgtatgcgggagctttagtg 19701713  T

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Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 171
Target Start/End: Complemental strand, 27136754 - 27136707
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtg 171  Q
    ||||||||||||||| ||||||  |||||||||||||| |||||||||    
T  27136754 cttgtgtaaaaaacatggtaaggttgcgtacaatacaccaaaatggtg 27136707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 223
Target Start/End: Complemental strand, 39215061 - 39214962
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    |||||||||||||| ||||||| ||||||||||||  | ||||||||| | |  |||||| || | ||||||||  | |||||||||| |||||| ||||    
T  39215061 cttgtgtaaaaaactgggtaaggctgcgtacaatattccaaaatggtgggtccccttcccaaaccctgcgtatgtggaagctttagtgcaccgggctgcc 39214962  T

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Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 228
Target Start/End: Complemental strand, 6983907 - 6983810
Alignment:
Q  130 taaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttt 228  Q
    ||||||||||||||||  ||||||||||||||  |||||||| |||  ||| ||| | | |||||| ||||||||||| ||| |||||| |||| ||||    
T  6983907 taaaaaacagggtaagtatgcgtacaatacac-caaatggtgggacccctttccggaccctgcgtaggcaggagctttggtgcaccgggctgccctttt 6983810  T

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Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 171
Target Start/End: Complemental strand, 15511253 - 15511204
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcg--tacaatacactaaaatggtg 171  Q
    |||||||||||||||||||||| |||||  |||||||||| |||||||||    
T  15511253 cttgtgtaaaaaacagggtaaggctgcggatacaatacaccaaaatggtg 15511204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 230
Target Start/End: Original strand, 23796521 - 23796626
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    |||||||||||| ||  |||||  |||||||||||||| ||| |||||||||  ||||||  | | ||| ||||| |||||||||||| |||||| ||||    
T  23796521 cttgtgtaaaaatcaatgtaaggttgcgtacaatacaccaaa-tggtgagaccccttcccagaccctgcatatgctggagctttagtgcaccgggctgcc 23796619  T
Q  224 atttttt 230  Q
     ||||||    
T  23796620 ctttttt 23796626  T

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Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 230
Target Start/End: Complemental strand, 31382308 - 31382211
Alignment:
Q  132 aaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttttt 230  Q
    ||||||||| |||| |||||||||||||||  |||||||| |||  ||||| | | | ||| ||||| ||||||||| || ||||||||||| ||||||    
T  31382308 aaaaacaggataaggctgcgtacaatacac-caaatggtgggaccccttcctggaccctgcatatgcgggagctttactgtaccgggttgccctttttt 31382211  T

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Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 229
Target Start/End: Original strand, 50812003 - 50812100
Alignment:
Q  131 aaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccattttt 229  Q
    |||||||||||||||  |||||||||||||| ||||||||| |||  |||||||   | ||||||||| ||||||||| || || ||| |||| |||||    
T  50812003 aaaaaacagggtaaggttgcgtacaatacaccaaaatggtg-gaccccttcccgcgccctgcgtatgcgggagctttaatgcactgggctgcccttttt 50812100  T

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Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 229
Target Start/End: Original strand, 6358185 - 6358282
Alignment:
Q  132 aaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccattttt 229  Q
    |||| ||||||||  |||||||||| |||| ||||||||| |||  ||||||  | | ||||||||||||| ||||||||| | ||| |||| |||||    
T  6358185 aaaatcagggtaaagctgcgtacaaaacaccaaaatggtgggaccccttcccagaccctgcgtatgcaggatctttagtgatcggggctgcccttttt 6358282  T

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Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 161
Target Start/End: Complemental strand, 18724647 - 18724610
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacac 161  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  18724647 cttgtgtaaaaaacagggtaaggctgtgtacaatacac 18724610  T

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Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 31442485 - 31442432
Alignment:
Q  131 aaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccg 184  Q
    |||||||||||||||  |||||||||||||| ||||||||| |||  |||||||    
T  31442485 aaaaaacagggtaaggatgcgtacaatacaccaaaatggtgggaccccttcccg 31442432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 230
Target Start/End: Complemental strand, 45812630 - 45812534
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttttt 230  Q
    |||| |||||||| |||| |||||||||| ||| ||||| |||  |||||| || | ||| ||||| |||||| ||||| ||||||||||| ||||||    
T  45812630 aaaagagggtaaggctgcatacaatacaccaaa-tggtgggaccccttcccaaaccctgcatatgcgggagctctagtgcaccgggttgccttttttt 45812534  T

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Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 14617094 - 14617189
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggtt 220  Q
    |||||||||| |||| ||||||  ||||||||||||||  |||||||| ||   ||||||| | | ||| ||||| |||||||||||| ||||||||    
T  14617094 cttgtgtaaataacaaggtaaggttgcgtacaatacac-caaatggtgggatcccttcccggaccctgcatatgcgggagctttagtgcaccgggtt 14617189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 220
Target Start/End: Complemental strand, 32632651 - 32632564
Alignment:
Q  132 aaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggtt 220  Q
    |||||||||||||| |||||||||||||||  |||||||| |||  |||||| || | ||| ||||| ||||||| |||| ||| ||||    
T  32632651 aaaaacagggtaaggctgcgtacaatacac-caaatggtgggaccccttcccaaaccctgcatatgcgggagcttgagtgcaccaggtt 32632564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 44485212 - 44485129
Alignment:
Q  123 acttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagcttt 207  Q
    |||||||||||| ||| |||||| |||||||||||||||  |||||||  |||  ||||||| ||| | ||||||| ||||||||    
T  44485212 acttgtgtaaaagacatggtaaggctgcgtacaatacac-caaatggttggaccccttcccggatcctacgtatgcgggagcttt 44485129  T

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Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 223
Target Start/End: Original strand, 45402175 - 45402250
Alignment:
Q  147 ctgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    ||||||||||||||| ||| ||||| |||  ||||||  | | ||||||||| |||||||||||| |||||||||||    
T  45402175 ctgcgtacaatacaccaaa-tggtgggaccccttcccagaccctgcgtatgcgggagctttagtgcaccgggttgcc 45402250  T

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Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 40272914 - 40272808
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    |||||||||||||||||||||| |||||||||||||||  |||||||| |||  ||||||| | | ||||||||| |||||||||||| |||||||||||    
T  40272914 cttgtgtaaaaaacagggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcc 40272816  T
Q  224 atttttta 231  Q
     |||||||    
T  40272815 ctttttta 40272808  T

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Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 13628894 - 13628789
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    ||||||||| |||||||||||| ||||||||||||||| || ||||||| |||  ||||||| | | ||||||||| |||||||||||| ||||||||||    
T  13628894 cttgtgtaagaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgc 13628795  T
Q  223 catttt 228  Q
    | ||||    
T  13628794 cctttt 13628789  T

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Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 223
Target Start/End: Complemental strand, 45786318 - 45786218
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    |||||||||||||||||||||| |||||||||||||| | ||||||||| |||  ||||||| | | |||| |||| |||||||||||| ||||||||||    
T  45786318 cttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgaatgctggagctttagtgcaccgggttgc 45786219  T
Q  223 c 223  Q
    |    
T  45786218 c 45786218  T

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Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 230
Target Start/End: Complemental strand, 46421139 - 46421031
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagcttt-agtgaaccgggttg 221  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||||| |||  ||||||| | | ||||||||| |||||||| |||| ||||| |||    
T  46421139 cttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttaagtgcaccggtttg 46421040  T
Q  222 ccatttttt 230  Q
    || ||||||    
T  46421039 ccctttttt 46421031  T

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Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 49013577 - 49013469
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||||| |||  ||||||| | |  || || || |||||||||||| ||||||||||    
T  49013577 cttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatacgcgggagctttagtgcaccgggttgc 49013478  T
Q  223 catttttta 231  Q
    | |||||||    
T  49013477 cctttttta 49013469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 230
Target Start/End: Complemental strand, 13730706 - 13730599
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    |||||||||||||||||||||| ||| ||||||||||| || ||||||| |||  ||||||| | |  || ||||| |||||||||||| ||||||||||    
T  13730706 cttgtgtaaaaaacagggtaaggctgtgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgc 13730607  T
Q  223 catttttt 230  Q
    | ||||||    
T  13730606 cctttttt 13730599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 211
Target Start/End: Complemental strand, 34420746 - 34420659
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtg 211  Q
    |||||||||||||||||||||| |||||||| |||||| ||||||||| |||  ||||||| | | ||||||||  ||||||||||||    
T  34420746 cttgtgtaaaaaacagggtaaggctgcgtaccatacaccaaaatggtgggaccccttcccggaccttgcgtatgtgggagctttagtg 34420659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 54374448 - 54374341
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    ||||||||||||| |||||||| ||||||||||| ||| ||||||||| |||  ||||||| | | ||| ||||| |||||||||||  ||| || ||||    
T  54374448 cttgtgtaaaaaatagggtaaggctgcgtacaatccaccaaaatggtgggaccccttcccggaccctgcatatgcgggagctttagttcaccaggctgcc 54374349  T
Q  224 atttttta 231  Q
    ||||||||    
T  54374348 atttttta 54374341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 229
Target Start/End: Original strand, 54484753 - 54484850
Alignment:
Q  131 aaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccattttt 229  Q
    |||||||| |||||| ||||||||||||||| ||| ||||| |||  ||||||| | | ||||||||| |||||||||||| ||||||||||| |||||    
T  54484753 aaaaaacaaggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttttt 54484850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 223
Target Start/End: Complemental strand, 353450 - 353353
Alignment:
Q  127 gtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    ||||||||||||||||||| ||||||||||||||| || ||||||| |||  ||||||| | |  || ||||| |||||||||||| |||||||||||    
T  353450 gtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgcc 353353  T

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Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 829521 - 829452
Alignment:
Q  148 tgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgg 217  Q
    |||||||||||||| ||||||||| |||  ||||||||| | |||||||||||||||||||||| |||||    
T  829521 tgcgtacaatacaccaaaatggtgggaccccttcccgaaccctgcgtatgcaggagctttagtgcaccgg 829452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 208
Target Start/End: Complemental strand, 8247791 - 8247706
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagcttta 208  Q
    ||||||||||||||||||||||  |||||||||||||| || ||||||| |||| ||||||| | | ||||||||| |||||||||    
T  8247791 cttgtgtaaaaaacagggtaaggttgcgtacaatacaccaataatggtgggactccttcccggaccctgcgtatgcgggagcttta 8247706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 14987012 - 14987109
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggtt 220  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||||| |||   |||||| | | ||| ||||| |||||||||||| ||||||||    
T  14987012 cttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggacccattcccggaccttgcatatgcgggagctttagtgcaccgggtt 14987109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 25517249 - 25517169
Alignment:
Q  147 ctgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttt 228  Q
    ||||||||||||||| ||||||||| |||  ||||||| ||| ||||||||| |||||||||||| ||||||||||| ||||    
T  25517249 ctgcgtacaatacac-aaaatggtgggaccccttcccggatcctgcgtatgctggagctttagtgcaccgggttgccctttt 25517169  T

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Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 29366824 - 29366719
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    ||||| |||||||||||||||| ||||||||||||||| || ||||||| |||  ||||||| | | ||||||||  |||||||||||| || |||||||    
T  29366824 cttgtataaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgtgggagctttagtgcactgggttgc 29366725  T
Q  223 catttt 228  Q
    | ||||    
T  29366724 cctttt 29366719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 229
Target Start/End: Complemental strand, 53996668 - 53996563
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    |||||||||||||||||||||| |||| |||||||||| ||||||||| |||  ||||||  |   ||||||||  |||||||||||| |||||| ||||    
T  53996668 cttgtgtaaaaaacagggtaaggctgcttacaatacaccaaaatggtgggaccccttccctgacactgcgtatgtgggagctttagtgcaccgggctgcc 53996569  T
Q  224 attttt 229  Q
     |||||    
T  53996568 cttttt 53996563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 223
Target Start/End: Original strand, 22609828 - 22609918
Alignment:
Q  132 aaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    |||||||||||||| |||||||||||||||  |||||||| |||  ||||||| | | ||||||||| ||||||| |||| |||||||||||    
T  22609828 aaaaacagggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggaccttgcgtatgcgggagcttcagtgcaccgggttgcc 22609918  T

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Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 230
Target Start/End: Original strand, 7943045 - 7943150
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    ||||| ||||||||||||||||||||||||||||||| | |||||||| ||   ||| ||  | | ||||||||| |||||||||||| || ||||||||    
T  7943045 cttgtctaaaaaacagggtaagactgcgtacaataca-tcaaatggtgggatccctttccagaccatgcgtatgcgggagctttagtgcactgggttgcc 7943143  T
Q  224 atttttt 230  Q
     ||||||    
T  7943144 ttttttt 7943150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 230
Target Start/End: Original strand, 26869769 - 26869866
Alignment:
Q  132 aaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttttt 230  Q
    |||||||||||||| |||||||||||||||  |||||||| |||  ||| ||| | | ||||||||| |||||||| ||| ||||||||||| ||||||    
T  26869769 aaaaacagggtaaggctgcgtacaatacac-caaatggtgggaccccttgccggaccatgcgtatgcgggagctttggtgcaccgggttgccctttttt 26869866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 223
Target Start/End: Original strand, 31592911 - 31593000
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    ||||||||||||| |||||||||||||||  |||||||| |||| ||||||| | | ||| ||||| |||||| ||||| |||||||||||    
T  31592911 aaaacagggtaaggctgcgtacaatacac-caaatggtgggactccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcc 31593000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 223
Target Start/End: Complemental strand, 10795527 - 10795427
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    ||||||||||| |||||||||| |||||||||||||| | ||||||||| |||  ||||| | | | ||||||||| ||||||| |||| ||| ||||||    
T  10795527 cttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgc 10795428  T
Q  223 c 223  Q
    |    
T  10795427 c 10795427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 12914137 - 12914034
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    |||||||||||||||||||||| | |||||||||||||  ||||||||||||  ||||||  | | ||| ||||| ||||||| | || |||||||||||    
T  12914137 cttgtgtaaaaaacagggtaaggcggcgtacaatacac-caaatggtgagaccccttcccagaccctgcatatgcgggagcttcaatgcaccgggttgcc 12914039  T
Q  224 atttt 228  Q
     ||||    
T  12914038 ctttt 12914034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 171
Target Start/End: Original strand, 55401231 - 55401278
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtg 171  Q
    ||||||||||||||||| |||||||||||| ||||||| |||||||||    
T  55401231 cttgtgtaaaaaacaggttaagactgcgtataatacaccaaaatggtg 55401278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 231
Target Start/End: Original strand, 15797284 - 15797381
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttttta 231  Q
    ||||||||||||| |||||||||||||||  |||||||| |||  ||||||| | | ||| ||||  |||||| ||||| ||||||||||| |||||||    
T  15797284 aaaacagggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggaccctgcatatgtgggagctctagtgcaccgggttgccctttttta 15797381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 223
Target Start/End: Original strand, 39203578 - 39203667
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    |||||||||||||  |||||||||||||| ||| ||||| |||  ||||||| | | ||| ||||| |||||||||||| |||||||||||    
T  39203578 aaaacagggtaaggttgcgtacaatacaccaaa-tggtgggaccccttcccggaccttgcatatgcgggagctttagtgcaccgggttgcc 39203667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 161
Target Start/End: Original strand, 9276319 - 9276356
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacac 161  Q
    |||||||||||||||||||||| |||||||||||||||    
T  9276319 cttgtgtaaaaaacagggtaaggctgcgtacaatacac 9276356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 230
Target Start/End: Complemental strand, 52926304 - 52926216
Alignment:
Q  141 gtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttttt 230  Q
    ||||| ||||||||||||||| ||| ||||| |||  ||||||| | | ||||||||| |||||||||| | ||||||||||| ||||||    
T  52926304 gtaaggctgcgtacaatacaccaaa-tggtgggacaccttcccggaccctgcgtatgcgggagctttagcgcaccgggttgccctttttt 52926216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 229
Target Start/End: Original strand, 1217152 - 1217247
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccattttt 229  Q
    ||||||||||||| |||||||||||||||  |||||| | |||  ||||||| | | ||| ||||| |||||| ||||| ||||||||||| |||||    
T  1217152 aaaacagggtaaggctgcgtacaatacac-caaatggcgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttttt 1217247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 4495765 - 4495729
Alignment:
Q  125 ttgtgtaaaaaacagggtaagactgcgtacaatacac 161  Q
    ||||||||||||||||||||| |||||||||||||||    
T  4495765 ttgtgtaaaaaacagggtaaggctgcgtacaatacac 4495729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 229
Target Start/End: Complemental strand, 34771457 - 34771362
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccattttt 229  Q
    ||||||||||||| |||||||||||||||  |||||||| |||  ||||||| | | ||| ||||| |||||| ||||| |||||| |||| |||||    
T  34771457 aaaacagggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggctgcccttttt 34771362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 26573184 - 26573219
Alignment:
Q  126 tgtgtaaaaaacagggtaagactgcgtacaatacac 161  Q
    |||||||||||||||||||| |||||||||||||||    
T  26573184 tgtgtaaaaaacagggtaaggctgcgtacaatacac 26573219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 223
Target Start/End: Complemental strand, 22123010 - 22122921
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    ||||||||||||| |||||||||||||||  |||||||| |||  ||||||| | | ||| |||||  ||||| ||||| |||||||||||    
T  22123010 aaaacagggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggaccctgcatatgcgagagctctagtgcaccgggttgcc 22122921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 230
Target Start/End: Complemental strand, 24851364 - 24851298
Alignment:
Q  164 aaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttttt 230  Q
    |||||||| |||  ||||||| ||| ||| ||||| |||||||||||| ||||||||||| ||||||    
T  24851364 aaatggtgggaccccttcccggatcctgcatatgcgggagctttagtgcaccgggttgccctttttt 24851298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 165
Target Start/End: Original strand, 33235594 - 33235628
Alignment:
Q  131 aaaaaacagggtaagactgcgtacaatacactaaa 165  Q
    ||||||||||||||||||| |||||||||||||||    
T  33235594 aaaaaacagggtaagactgtgtacaatacactaaa 33235628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 4495713 - 4495672
Alignment:
Q  190 tgcgtatgcaggagctttagtgaaccgggttgccatttttta 231  Q
    ||||||||| |||||||||||| ||||||||||| |||||||    
T  4495713 tgcgtatgcgggagctttagtgcaccgggttgccctttttta 4495672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 161
Target Start/End: Complemental strand, 31904955 - 31904922
Alignment:
Q  128 tgtaaaaaacagggtaagactgcgtacaatacac 161  Q
    |||||||||||||||| |||||||||||||||||    
T  31904955 tgtaaaaaacagggtatgactgcgtacaatacac 31904922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 161
Target Start/End: Complemental strand, 52428579 - 52428542
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacac 161  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  52428579 cttgtgtaaaatacagggtaaggctgcgtacaatacac 52428542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 161
Target Start/End: Complemental strand, 54032661 - 54032624
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacac 161  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  54032661 cttgtgtaaaaaacagggtaaggctgcatacaatacac 54032624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 228
Target Start/End: Original strand, 16735503 - 16735598
Alignment:
Q  132 aaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttt 228  Q
    |||||||||||||| |||||||||||||||  |||||||| |||  ||||||| |   ||||||||| | ||||| |||| || |||||||| ||||    
T  16735503 aaaaacagggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggacactgcgtatgcggtagcttcagtgcactgggttgccctttt 16735598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 39212045 - 39212081
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaataca 160  Q
    |||||||||| |||| |||||||||||||||||||||    
T  39212045 cttgtgtaaataacaaggtaagactgcgtacaataca 39212081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 230
Target Start/End: Original strand, 40390361 - 40390401
Alignment:
Q  190 tgcgtatgcaggagctttagtgaaccgggttgccatttttt 230  Q
    ||||||||| |||||||||||| ||||||||||| ||||||    
T  40390361 tgcgtatgcgggagctttagtgcaccgggttgccctttttt 40390401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 230
Target Start/End: Original strand, 47624219 - 47624259
Alignment:
Q  190 tgcgtatgcaggagctttagtgaaccgggttgccatttttt 230  Q
    ||||||||| |||||||||||| ||||||||||| ||||||    
T  47624219 tgcgtatgcgggagctttagtgcaccgggttgccctttttt 47624259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 39461098 - 39460993
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    |||||||||||||||| ||||| ||||||||||||||| || |||||||||||  ||||||| | | ||||||||| |||||||||||| ||||||||||    
T  39461098 cttgtgtaaaaaacagagtaaggctgcgtacaatacaccaataatggtgagaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgc 39460999  T
Q  223 catttt 228  Q
    | ||||    
T  39460998 cctttt 39460993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 223
Target Start/End: Original strand, 33866983 - 33867083
Alignment:
Q  125 ttgtgtaaaaaa-cagggtaagactgcgtacaatacactaaaa-tggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    |||||||||||| |||||||||||||| |||||||||  |||| |||||| ||||||||||||| | ||||||||||| |||||||||| ||||||||||    
T  33866983 ttgtgtaaaaaagcagggtaagactgcatacaatacataaaaaatggtgacacttcttcccgaaccctgcgtatgcagaagctttagtgcaccgggttgc 33867082  T
Q  223 c 223  Q
    |    
T  33867083 c 33867083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 35261712 - 35261818
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    ||||||||||||||||||||||  ||||||||||||||  |||||||| |||  ||||| | | | ||||||||| |||||||||||| |||||||||||    
T  35261712 cttgtgtaaaaaacagggtaaggttgcgtacaatacac-caaatggtgggaccccttcctggaccctgcgtatgcgggagctttagtgcaccgggttgcc 35261810  T
Q  224 atttttta 231  Q
     |||||||    
T  35261811 ctttttta 35261818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 229
Target Start/End: Complemental strand, 28817728 - 28817624
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    |||||||||||||||||||||| |||||||||||||||   ||||||| |||  ||||||| | | ||||||||| |||||||||||| | |||||||||    
T  28817728 cttgtgtaaaaaacagggtaaggctgcgtacaatacac-ccaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcatcgggttgcc 28817630  T
Q  224 attttt 229  Q
     |||||    
T  28817629 cttttt 28817624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 221
Target Start/End: Original strand, 44530182 - 44530278
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttg 221  Q
    |||||||||||||||||||||| |||||||||||||||  |||||||| |||  ||||| | | | ||||||||| |||||||||||| |||||||||    
T  44530182 cttgtgtaaaaaacagggtaaggctgcgtacaatacac-caaatggtgggaccccttcctggaccctgcgtatgcgggagctttagtgcaccgggttg 44530278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 36720829 - 36720932
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    |||||||||||||||||||||| |||||||||||||||  |||||||| |||  ||||||| | | ||||||||| | |||||||||| ||| |||||||    
T  36720829 cttgtgtaaaaaacagggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggaccctgcgtatgcggaagctttagtgcacccggttgcc 36720927  T
Q  224 atttt 228  Q
     ||||    
T  36720928 ctttt 36720932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 223
Target Start/End: Original strand, 17823609 - 17823707
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    |||||||||||| |||| |||||||||||| ||||||| ||| |||||  ||  ||||||||| | ||| |||||||||||||||||| |||||||||||    
T  17823609 cttgtgtaaaaaccaggataagactgcgtaaaatacaccaaa-tggtggaaccccttcccgaaccctgcatatgcaggagctttagtgcaccgggttgcc 17823707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 230
Target Start/End: Original strand, 20869956 - 20870063
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||||| |||  ||||| | | |  || ||||| |||||||||||| ||||||||||    
T  20869956 cttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttccaggaccccgcatatgcgggagctttagtgcaccgggttgc 20870055  T
Q  223 catttttt 230  Q
    | ||||||    
T  20870056 cctttttt 20870063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 228
Target Start/End: Original strand, 12625930 - 12626026
Alignment:
Q  131 aaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttt 228  Q
    |||||||||||||||||||| ||||||||||  |||||||| |||  | ||||| | | ||||||||| |||||||||||| ||||||||||| ||||    
T  12625930 aaaaaacagggtaagactgcatacaatacac-caaatggtgggaccccctcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 12626026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 230
Target Start/End: Original strand, 6760855 - 6760962
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    |||||||||||||||||||||| || |||||||||||| || ||||||| |||  |||| || | |  || ||||| |||||||||||| ||||||||||    
T  6760855 cttgtgtaaaaaacagggtaaggcttcgtacaatacaccaataatggtgggaccccttctcggaccccgcatatgcgggagctttagtgcaccgggttgc 6760954  T
Q  223 catttttt 230  Q
    | ||||||    
T  6760955 cctttttt 6760962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 230
Target Start/End: Complemental strand, 7136631 - 7136524
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    |||||||||||| ||||||||| ||||||||||||||| || ||||||| |||  ||||||| | |  || ||||| |||||||||||| |||||||| |    
T  7136631 cttgtgtaaaaaccagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttac 7136532  T
Q  223 catttttt 230  Q
    | ||||||    
T  7136531 cctttttt 7136524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 171
Target Start/End: Complemental strand, 14018071 - 14018024
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtg 171  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||    
T  14018071 cttgtgtaaaaaacagggtgagactgcgtacaatacactaaattggtg 14018024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 223
Target Start/End: Original strand, 45071305 - 45071395
Alignment:
Q  132 aaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    |||||||||||||| |||||||||||||||  |||||||| |||  ||||||| | | ||||||||| ||||||| |||| |||||||||||    
T  45071305 aaaaacagggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggaccttgcgtatgcgggagcttcagtgcaccgggttgcc 45071395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 222
Target Start/End: Original strand, 5689664 - 5689761
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    |||||||||||| ||||||||| |||||||||||||||  ||||||||  ||  ||||||||| | ||||||||  |||||||||||| ||||| ||||    
T  5689664 cttgtgtaaaaagcagggtaaggctgcgtacaatacac-caaatggtggaaccccttcccgaaccatgcgtatgtgggagctttagtgcaccggtttgc 5689761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 221
Target Start/End: Original strand, 16225056 - 16225150
Alignment:
Q  128 tgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttg 221  Q
    |||||||||||||||||||||||||||||||||| || ||||||| ||   ||||||| | |  || ||||| |||||||||||| |||||||||    
T  16225056 tgtaaaaaacagggtaagactgcgtacaatacaccaataatggtgggatcccttcccggaccccgcatatgcgggagctttagtgcaccgggttg 16225150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 211
Target Start/End: Original strand, 29877128 - 29877213
Alignment:
Q  125 ttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtg 211  Q
    ||||||||||||||||||||| |||||||||||||||  |||||||| |||  ||||||| | | ||||||||| ||||| ||||||    
T  29877128 ttgtgtaaaaaacagggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggaccctgcgtatgcgggagcgttagtg 29877213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 229
Target Start/End: Complemental strand, 5135391 - 5135288
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    ||||||||||||| |||||||| ||| |||||||||||  |||||||| |||  ||||||| | | |||||||||||||||||| ||| |||||| ||||    
T  5135391 cttgtgtaaaaaagagggtaaggctgtgtacaatacac-caaatggtgggaccccttcccggaccctgcgtatgcaggagcttt-gtgcaccgggctgcc 5135294  T
Q  224 attttt 229  Q
     |||||    
T  5135293 cttttt 5135288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 229
Target Start/End: Original strand, 25250556 - 25250661
Alignment:
Q  125 ttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    |||||||||||| |||||| | ||||||||||||||| || ||||||| |||  ||||||||| |  || ||||| |||| ||||||| |||||||||||    
T  25250556 ttgtgtaaaaaatagggtatggctgcgtacaatacaccaataatggtgggaccccttcccgaaccccgcatatgcgggagatttagtgcaccgggttgcc 25250655  T
Q  224 attttt 229  Q
     |||||    
T  25250656 cttttt 25250661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 44742619 - 44742574
Alignment:
Q  126 tgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtg 171  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||    
T  44742619 tgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaatggtg 44742574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 211
Target Start/End: Complemental strand, 17250979 - 17250891
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtg 211  Q
    ||||||||||||||||| |||| | ||||||||||||| || ||||||| |||   |||||||| | |||||||| |||||||||||||    
T  17250979 cttgtgtaaaaaacaggttaaggcagcgtacaatacaccaataatggtgggaccctttcccgaaccctgcgtatgaaggagctttagtg 17250891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 223
Target Start/End: Original strand, 13160742 - 13160832
Alignment:
Q  132 aaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    |||||||||||||| |||||||||||||||  |||||||| |||  ||||||| | | ||||||||| ||||||| ||||  ||||||||||    
T  13160742 aaaaacagggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggaccctgcgtatgcgggagcttcagtgcgccgggttgcc 13160832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 20284166 - 20284075
Alignment:
Q  131 aaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttg 221  Q
    |||||| |||||||| ||||||||||||||| || ||||||| |||  ||||||| | | ||||||||| |||| ||||||| |||||||||    
T  20284166 aaaaaaaagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagttttagtgcaccgggttg 20284075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 21070794 - 21070703
Alignment:
Q  131 aaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttg 221  Q
    |||||| |||||||| ||||||||||||||| || ||||||| |||  ||||||| | | ||||||||| |||| ||||||| |||||||||    
T  21070794 aaaaaaaagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagttttagtgcaccgggttg 21070703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 230
Target Start/End: Complemental strand, 8897866 - 8897761
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    ||||||||||||| |||||||| || ||||||||||||  |||||||| |||  ||||||| | | ||| ||||| ||||||||| || ||| |||||||    
T  8897866 cttgtgtaaaaaatagggtaaggctacgtacaatacac-caaatggtgggaccccttcccggaccctgcatatgcgggagctttactgcacccggttgcc 8897768  T
Q  224 atttttt 230  Q
     ||||||    
T  8897767 ctttttt 8897761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 222
Target Start/End: Complemental strand, 29521787 - 29521690
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    ||||| |||||||||||||||| |||||||||||||||  |||||||| ||   | ||||  | | ||||||||| |||||||||||| ||||||||||    
T  29521787 cttgtttaaaaaacagggtaaggctgcgtacaatacac-caaatggtgggaacccatcccagaccctgcgtatgcgggagctttagtgcaccgggttgc 29521690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 230
Target Start/End: Complemental strand, 12670343 - 12670247
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttttt 230  Q
    ||||||||||||| |||||||||||||||  |||||||| |||  ||||||| | | ||| ||||| |||||| ||||| |||||||| || ||||||    
T  12670343 aaaacagggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttaccctttttt 12670247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 229
Target Start/End: Complemental strand, 18164854 - 18164758
Alignment:
Q  132 aaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccattttt 229  Q
    ||||||||||||||  |||||||||||||| |||  | || |||   |||||| | | ||||||||| |||||||||||| |||||||||||||||||    
T  18164854 aaaaacagggtaaggttgcgtacaatacaccaaag-gatgtgaccatttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccattttt 18164758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 161
Target Start/End: Original strand, 2626562 - 2626592
Alignment:
Q  131 aaaaaacagggtaagactgcgtacaatacac 161  Q
    |||||||||||||||||||||||||||||||    
T  2626562 aaaaaacagggtaagactgcgtacaatacac 2626592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 228
Target Start/End: Original strand, 26954173 - 26954271
Alignment:
Q  131 aaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttt 228  Q
    ||||||||||||||| ||||||||||||||| || ||||||| |||  ||||||  | |  || ||||| |||||||||||| || |||||||| ||||    
T  26954173 aaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccagacctcgcatatgcgggagctttagtgcactgggttgccctttt 26954271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 27468143 - 27468089
Alignment:
Q  176 ttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttttt 230  Q
    ||||||||| | | ||||||||| |||||||||||| ||||||||||| ||||||    
T  27468143 ttcttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttttt 27468089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 161
Target Start/End: Complemental strand, 8484040 - 8484003
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacac 161  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  8484040 cttgtgtaaaaaacagggcaaggctgcgtacaatacac 8484003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 230
Target Start/End: Complemental strand, 30454190 - 30454094
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttttt 230  Q
    |||||| |||||| |||||||| |||||| ||| ||||| |||  ||||||| | | ||| ||||| |||||| ||||| ||||||||||| ||||||    
T  30454190 aaaacaaggtaaggctgcgtacgatacaccaaa-tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttttt 30454094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 36486627 - 36486570
Alignment:
Q  166 atggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    |||||| ||| |||||||| | | ||||||||||||||||||||||  ||||||||||    
T  36486627 atggtgggacctcttcccggaccttgcgtatgcaggagctttagtgccccgggttgcc 36486570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 950646 - 950591
Alignment:
Q  175 cttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttg-ccatttttt 230  Q
    ||||||||||| || ||| |||||||||||||||||| ||||||||| |||||||||    
T  950646 cttcttcccgactc-tgcatatgcaggagctttagtgcaccgggttgtccatttttt 950591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 4e-22; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 125 - 230
Target Start/End: Original strand, 24448924 - 24449028
Alignment:
Q  125 ttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcca 224  Q
    |||||||||||| |||||||| ||||||||||||||| ||| ||||| |||  ||||||| | | |||||||||||||||||||||| |||||||||||     
T  24448924 ttgtgtaaaaaatagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcgtatgcaggagctttagtgcaccgggttgccc 24449022  T
Q  225 tttttt 230  Q
    ||||||    
T  24449023 tttttt 24449028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 38879614 - 38879719
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    ||||| |||||||||||||||| ||||||||||||||| || ||||||| |||  ||||||| | | ||||||||| |||||||||||| ||||||||||    
T  38879614 cttgtataaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgc 38879713  T
Q  223 catttt 228  Q
    | ||||    
T  38879714 cctttt 38879719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 16880749 - 16880654
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggtt 220  Q
    |||||||||||||||||||||| |||||||||||||||  |||||||| |||  ||||||| | | ||||||||| |||||||||||| ||||||||    
T  16880749 cttgtgtaaaaaacagggtaaggctgcgtacaatacac-caaatggtgtgaccacttcccggaccatgcgtatgcgggagctttagtgcaccgggtt 16880654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 208
Target Start/End: Original strand, 27328785 - 27328870
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagcttta 208  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||||| |||  ||||||||| | ||||||||| |||||||||    
T  27328785 cttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccgaaccctgcgtatgcgggagcttta 27328870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 4619208 - 4619103
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||||| |||  ||||||| | |  || |||||  ||||||||||| ||||||||||    
T  4619208 cttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgagagctttagtgcaccgggttgc 4619109  T
Q  223 catttt 228  Q
    | ||||    
T  4619108 cctttt 4619103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 223
Target Start/End: Complemental strand, 13801871 - 13801771
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||||| |||  ||||||| | |  || |||||  ||||||||||| ||||||||||    
T  13801871 cttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgagagctttagtgcaccgggttgc 13801772  T
Q  223 c 223  Q
    |    
T  13801771 c 13801771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 223
Target Start/End: Original strand, 20135637 - 20135737
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    ||||||||||||||| |||||| ||||||||||||||| || ||||||| |||  ||||||| | |  || ||||||||||||| |||| ||||||||||    
T  20135637 cttgtgtaaaaaacaaggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcaggagcttcagtgcaccgggttgc 20135736  T
Q  223 c 223  Q
    |    
T  20135737 c 20135737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 7097854 - 7097776
Alignment:
Q  132 aaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtg 211  Q
    ||||||||||||||  |||||||||||||| ||| |||||||||  ||||||||| | ||||||||| ||||||||||||    
T  7097854 aaaaacagggtaaggttgcgtacaatacaccaaa-tggtgagaccccttcccgaaccctgcgtatgcgggagctttagtg 7097776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 229
Target Start/End: Original strand, 43334243 - 43334341
Alignment:
Q  131 aaaaaacagggtaagactgcgtacaataca-ctaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccattttt 229  Q
    ||||||||||||||| |||||||||||||| | ||||||||| |||  ||||||| | | |||| |||| |||||||||||| ||||||||||| |||||    
T  43334243 aaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcg-atgcgggagctttagtgcaccgggttgcccttttt 43334341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 28516536 - 28516432
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    ||||||||||||||||| || | ||||||||||||||  ||||||||| |||   |||||  | | |||| ||||||||||||||||| ||| |||||||    
T  28516536 cttgtgtaaaaaacaggctagggctgcgtacaatacatcaaaatggtgggacccattcccagaccctgcgcatgcaggagctttagtggaccaggttgcc 28516437  T
Q  224 atttt 228  Q
     ||||    
T  28516436 ctttt 28516432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 228
Target Start/End: Original strand, 32703464 - 32703558
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttt 228  Q
    ||||||||||||| |||||||||||||||  |||||||| |||  ||||||| | | ||| ||||| |||||| ||||| ||||||||||| ||||    
T  32703464 aaaacagggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 32703558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 43574639 - 43574732
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccggg 218  Q
    |||||||| ||||||||||||| |||||||||||| ||  |||||||| |||  ||||||| | | ||||||||| |||||||||| | ||||||    
T  43574639 cttgtgtagaaaacagggtaaggctgcgtacaatatac-caaatggtgggaccccttcccggaccctgcgtatgcgggagctttagagcaccggg 43574732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 12477205 - 12477136
Alignment:
Q  142 taagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtg 211  Q
    |||| ||||||||||||||| ||||||||| |||  ||||||| ||  |||||||||| |||||||||||    
T  12477205 taaggctgcgtacaatacaccaaaatggtgggaccccttcccggattctgcgtatgcaagagctttagtg 12477136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 229
Target Start/End: Complemental strand, 8170077 - 8169982
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccattttt 229  Q
    ||||||||||||| |||||||||||||||  |||||||| |||  ||||||| | | ||| ||||| |||| || |||| ||||||||||| |||||    
T  8170077 aaaacagggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggaccctgcatatgcgggagtttcagtgcaccgggttgcccttttt 8169982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 29334428 - 29334532
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    ||||||||||||||| |||||| ||||||||||||||| | ||||||| |||   |||||| | | ||||||||  ||| ||||| || |||||| ||||    
T  29334428 cttgtgtaaaaaacaaggtaaggctgcgtacaatacaccagaatggtgggacccattcccggaccctgcgtatgtgggatctttaatgcaccgggctgcc 29334527  T
Q  224 atttt 228  Q
     ||||    
T  29334528 ctttt 29334532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 12575739 - 12575664
Alignment:
Q  148 tgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    |||||||||||||| ||||||||| |||  ||||| | | | |||||||||||||||||| ||| |||||| ||||    
T  12575739 tgcgtacaatacaccaaaatggtgggaccccttcctggaccctgcgtatgcaggagctttggtgcaccgggctgcc 12575664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 209022 - 208936
Alignment:
Q  132 aaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccggg 218  Q
    |||||||||||||| |||| | |||||||| ||||||||| |||  ||||| | | | || ||||||| ||||||||||| ||||||    
T  209022 aaaaacagggtaaggctgcattcaatacaccaaaatggtgggaccccttcctggaccctgggtatgcaagagctttagtgcaccggg 208936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 22187318 - 22187360
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaa 166  Q
    ||||||||||||||| | |||||||||||||||||||| ||||    
T  22187318 cttgtgtaaaaaacatgataagactgcgtacaatacaccaaaa 22187360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 207
Target Start/End: Original strand, 22600488 - 22600569
Alignment:
Q  125 ttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagcttt 207  Q
    |||||||||| |||||||||| ||| |||||||||||  |||||||| ||   ||||||| ||| ||||||||| ||||||||    
T  22600488 ttgtgtaaaacacagggtaaggctgtgtacaatacac-caaatggtgggatcccttcccggatcctgcgtatgcgggagcttt 22600569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 42924936 - 42924894
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaa 166  Q
    ||||||||||||||||||||||  |||||||||||||| ||||    
T  42924936 cttgtgtaaaaaacagggtaaggttgcgtacaatacaccaaaa 42924894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 228
Target Start/End: Original strand, 16957374 - 16957450
Alignment:
Q  151 gtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttt 228  Q
    ||||||||||| ||| ||||| |||  ||||||| | | ||||||||| |||||||||||| ||||||||||| ||||    
T  16957374 gtacaatacaccaaa-tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 16957450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 230
Target Start/End: Original strand, 35710353 - 35710449
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttttt 230  Q
    |||| |||||||| |||||| |||||||| ||| ||||| |||  ||||||| | | ||| ||||| |||||| ||||| ||||||||||| ||||||    
T  35710353 aaaatagggtaaggctgcgttcaatacaccaaa-tggtgggaccccttcccggaacatgcatatgcgggagctctagtgcaccgggttgccctttttt 35710449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 228
Target Start/End: Original strand, 39801616 - 39801652
Alignment:
Q  192 cgtatgcaggagctttagtgaaccgggttgccatttt 228  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  39801616 cgtatgcgggagctttagtgcaccgggttgccatttt 39801652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 41425982 - 41426018
Alignment:
Q  125 ttgtgtaaaaaacagggtaagactgcgtacaatacac 161  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  41425982 ttgtgtaaaaaacagggtaaggctgcatacaatacac 41426018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 223
Target Start/End: Original strand, 10543731 - 10543831
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    |||||||||||||||||||||| |||||||||||||| | ||||||||| |||  ||||||| | | ||||||||| |||||||||||| ||||||||||    
T  10543731 cttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgc 10543830  T
Q  223 c 223  Q
    |    
T  10543831 c 10543831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 8455418 - 8455315
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    ||||||||||| |||||||||| |||||||||||||||  |||||||| |||  ||||||| | | ||||||||| |||||||||||| |||||||||||    
T  8455418 cttgtgtaaaacacagggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggaccctgcgtatgccggagctttagtgcaccgggttgcc 8455320  T
Q  224 atttt 228  Q
     ||||    
T  8455319 ctttt 8455315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 10546203 - 10546301
Alignment:
Q  131 aaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttttt 230  Q
    ||||||||||||||| ||||||||||||||| ||| ||||| |||  ||||||| | | ||||||||| |||||||||||| ||||||||||| ||||||    
T  10546203 aaaaaacagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttttt 10546301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 223
Target Start/End: Original strand, 25632544 - 25632640
Alignment:
Q  126 tgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    ||||||||||||||| |||| |||||||||||||||  |||||||| || | ||||||||| | | ||||||| |||||||||||| |||||||||||    
T  25632544 tgtgtaaaaaacaggataaggctgcgtacaatacac-caaatggtgggattccttcccgaaccttacgtatgcgggagctttagtgcaccgggttgcc 25632640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 223
Target Start/End: Original strand, 14530351 - 14530451
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    ||||| |||||||||||||||| || |||||||||||| || ||||||| |||  ||||||| | | ||||||||| |||||||||||| ||||||||||    
T  14530351 cttgtataaaaaacagggtaaggctacgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgc 14530450  T
Q  223 c 223  Q
    |    
T  14530451 c 14530451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 133 - 228
Target Start/End: Original strand, 9671221 - 9671315
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttt 228  Q
    ||||||||||||| ||||||||||||||| ||| ||||| |||  ||||||| | | ||||||||| |||||||||||| ||||||||||| ||||    
T  9671221 aaaacagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 9671315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 17623597 - 17623703
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    |||||||||||| ||||||||| |||||||||||||||  ||||||||  ||  ||||||||||| ||||||||  | |||||||||| || ||||||||    
T  17623597 cttgtgtaaaaatcagggtaaggctgcgtacaatacac-caaatggtggaaccccttcccgaatcctgcgtatgtggaagctttagtgcactgggttgcc 17623695  T
Q  224 atttttta 231  Q
     |||||||    
T  17623696 ctttttta 17623703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 230
Target Start/End: Original strand, 36871534 - 36871629
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttttt 230  Q
    ||||||||||||| ||||||||||||||| ||| ||||| |||  ||||||| | | ||||||||| |||||||||||| ||||||||||| ||||||    
T  36871534 aaaacagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccggacc-tgcgtatgcgggagctttagtgcaccgggttgccctttttt 36871629  T

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Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 211
Target Start/End: Original strand, 19615025 - 19615112
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtg 211  Q
    ||||| ||||||||||||||||||||||||||||| || || ||| ||| |||  ||||||||| | ||||||||||||||||||||||    
T  19615025 cttgtataaaaaacagggtaagactgcgtacaatataccaataatagtg-gaccccttcccgaaccctgcgtatgcaggagctttagtg 19615112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 230
Target Start/End: Complemental strand, 25249830 - 25249735
Alignment:
Q  134 aaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttttt 230  Q
    |||||||||||| ||||||||||||||| ||| ||||| ||   ||||||||| | |||||||||  ||||||||||| ||||||||||| ||||||    
T  25249830 aaacagggtaaggctgcgtacaatacaccaaa-tggtgggatcccttcccgaaccctgcgtatgcgtgagctttagtgcaccgggttgccctttttt 25249735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 17668035 - 17668141
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    |||||||||||| ||||||||| |||||||||||||||  ||||||||  ||  |||| |||| | |||||||   |||||||||||| |||||||||||    
T  17668035 cttgtgtaaaaatcagggtaaggctgcgtacaatacac-caaatggtggaaccccttctcgaaccctgcgtatatgggagctttagtgcaccgggttgcc 17668133  T
Q  224 atttttta 231  Q
     |||||||    
T  17668134 ctttttta 17668141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 24200727 - 24200622
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaa-tggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    |||||||||||||||||||||| ||||||||||||||| |||| ||||| ||   ||||||| | | || |||||   ||||||||||| ||||||||||    
T  24200727 cttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaacccttcccggaccctgagtatgtgagagctttagtgcaccgggttgc 24200628  T
Q  223 catttt 228  Q
    | ||||    
T  24200627 cctttt 24200622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 161
Target Start/End: Complemental strand, 32781390 - 32781353
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacac 161  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32781390 cttgtgtaaaaaacagggtaagactgcgtacaatacac 32781353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 230
Target Start/End: Original strand, 14444769 - 14444866
Alignment:
Q  132 aaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttttt 230  Q
    |||||||||||||| ||| |||| |||||| ||| ||||| |||  ||||||| | | ||||||||| |||||||||||| ||| ||||||| ||||||    
T  14444769 aaaaacagggtaaggctgtgtacgatacaccaaa-tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccaggttgccctttttt 14444866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 26684715 - 26684630
Alignment:
Q  131 aaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgg 217  Q
    |||||| | |||||| |||||||||||| ||| |||||||| ||| |||||||||| | ||||||||| ||||||||| || |||||    
T  26684715 aaaaaatatggtaaggctgcgtacaatatact-aaatggtgggacctcttcccgaaccctgcgtatgcgggagctttaatgcaccgg 26684630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 230
Target Start/End: Original strand, 25641543 - 25641639
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttttt 230  Q
    ||||||||||||   |||||||||||||| ||| || || |||  ||||||||||| |||||||||  ||||||||||||||||| ||| | ||||||    
T  25641543 aaaacagggtaaagttgcgtacaatacaccaaattg-tgggaccccttcccgaatcctgcgtatgcgagagctttagtgaaccggattgtcctttttt 25641639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 25079812 - 25079721
Alignment:
Q  131 aaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    |||||||| ||||||  ||||||||||||||  || ||||| |||  ||||||| | | |||||||||| ||||||||||| |||||||||||    
T  25079812 aaaaaacaaggtaaggatgcgtacaatacaccgaa-tggtgggaccccttcccggaccctgcgtatgcaagagctttagtgcaccgggttgcc 25079721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 7214567 - 7214618
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacac-taaaatggtgaga 174  Q
    ||||||||||| |||||||||| |||||||||||||||  ||||||||||||    
T  7214567 cttgtgtaaaatacagggtaaggctgcgtacaatacacaaaaaatggtgaga 7214618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 207
Target Start/End: Complemental strand, 21377175 - 21377093
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagcttt 207  Q
    |||||||||||||||||||||| ||| ||||||| |||  |||||||| |||  ||||||||| | ||||||||  ||||||||    
T  21377175 cttgtgtaaaaaacagggtaaggctgggtacaatgcac-caaatggtgggaccccttcccgaaccctgcgtatgtgggagcttt 21377093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 21779354 - 21779260
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttt 228  Q
    |||||||||||||  |||||||||||||| ||| ||||| |||  ||||||| | | ||| ||||| |||||| ||||| ||||||||||| ||||    
T  21779354 aaaacagggtaaggttgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 21779260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 17471589 - 17471675
Alignment:
Q  131 aaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgg 217  Q
    |||||||||| ||||||||||||||||| || |||||| ||||||  ||||||  | | ||| ||||| |||| ||||||| |||||    
T  17471589 aaaaaacaggataagactgcgtacaatataccaaaatgatgagaccccttccctgaccctgcctatgcgggagttttagtgcaccgg 17471675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 161
Target Start/End: Complemental strand, 23145800 - 23145763
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacac 161  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  23145800 cttgtgtaaaaaacagtgtaaggctgcgtacaatacac 23145763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 161
Target Start/End: Complemental strand, 23557590 - 23557553
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacac 161  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  23557590 cttgtgtaaaaaacagtgtaaggctgcgtacaatacac 23557553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 5841062 - 5841166
Alignment:
Q  125 ttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    |||||||||||| ||||||||  ||||||||||||| | | ||||||| |||  ||||||| | |  || ||||| |||||||||||| |||| ||||||    
T  5841062 ttgtgtaaaaaatagggtaaggatgcgtacaatacatcaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgagttgcc 5841161  T
Q  224 atttt 228  Q
     ||||    
T  5841162 ctttt 5841166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 12315748 - 12315697
Alignment:
Q  130 taaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcc 182  Q
    |||||||||||||||||||| |||||||||||  |||| |||||||| |||||    
T  12315748 taaaaaacagggtaagactgtgtacaatacac-caaatagtgagactccttcc 12315697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 24890451 - 24890530
Alignment:
Q  131 aaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtg 211  Q
    |||||||| |||||| |||| |||||||||| ||  ||||| |||  ||||||| | | ||||||||||||||||||||||    
T  24890451 aaaaaacaaggtaaggctgcatacaatacaccaat-tggtgggaccccttcccggaccctgcgtatgcaggagctttagtg 24890530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 6e-21; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 223
Target Start/End: Complemental strand, 11617690 - 11617592
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||| |||  ||||| | | | ||||||||||||| |||||||| |||||||||||    
T  11617690 cttgtgtaaaaaacagggtaagactgcgtacaatacac-caaatggtgggaccccttcctggaccctgcgtatgcaggacctttagtgcaccgggttgcc 11617592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 230
Target Start/End: Original strand, 7879671 - 7879776
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    ||||||||||||||| |||||| |||||||||||||||  |||||||| |||  ||||||| | | ||||||||| ||||||| |||| |||||||||||    
T  7879671 cttgtgtaaaaaacaaggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggaccctgcgtatgcgggagcttcagtgcaccgggttgcc 7879769  T
Q  224 atttttt 230  Q
     ||||||    
T  7879770 ctttttt 7879776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 21566468 - 21566562
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccggg 218  Q
    |||||||||||||||| | ||||||||||||||||||| ||||||||  |||  ||||||||| | ||| ||||| |||||||||||| ||||||    
T  21566468 cttgtgtaaaaaacagaggaagactgcgtacaatacaccaaaatggtaggaccccttcccgaaccctgcatatgcgggagctttagtgcaccggg 21566562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 220
Target Start/End: Complemental strand, 35334915 - 35334823
Alignment:
Q  127 gtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggtt 220  Q
    ||||||||||||||||||||||| |||||||||||   ||||||| |||  ||||||| | | |||||||||||||||||||||| ||||||||    
T  35334915 gtgtaaaaaacagggtaagactgtgtacaatacac-cgaatggtgggaccccttcccggaccctgcgtatgcaggagctttagtgcaccgggtt 35334823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 229
Target Start/End: Original strand, 42805557 - 42805663
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    |||||||||||||||||||||| ||| ||||||||||| || ||||||| |||  ||||||| | |  || ||||| |||||||||||| ||||||||||    
T  42805557 cttgtgtaaaaaacagggtaaggctgtgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgc 42805656  T
Q  223 cattttt 229  Q
    | |||||    
T  42805657 ccttttt 42805663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 2541121 - 2541026
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggtt 220  Q
    |||||||||||||||||||||| |||||||| ||||||  |||||||| |||  |||||||   | ||||||||| |||||||||||| ||||||||    
T  2541121 cttgtgtaaaaaacagggtaaggctgcgtactatacac-caaatggtgggaccccttcccggtccctgcgtatgcgggagctttagtgcaccgggtt 2541026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 223
Target Start/End: Original strand, 47716492 - 47716592
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||||| |||  ||||||| | |  || ||||| |||||||| ||| ||||||||||    
T  47716492 cttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttggtgcaccgggttgc 47716591  T
Q  223 c 223  Q
    |    
T  47716592 c 47716592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 203
Target Start/End: Complemental strand, 14099107 - 14099030
Alignment:
Q  125 ttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggag 203  Q
    |||||||||||||||| ||||||||||||||||||||  |||||||| |||  ||||||||| | | ||||||||||||    
T  14099107 ttgtgtaaaaaacaggttaagactgcgtacaatacac-caaatggtgggaccccttcccgaaccctacgtatgcaggag 14099030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 203
Target Start/End: Complemental strand, 14409124 - 14409047
Alignment:
Q  125 ttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggag 203  Q
    |||||||||||||||| ||||||||||||||||||||  |||||||| |||  ||||||||| | | ||||||||||||    
T  14409124 ttgtgtaaaaaacaggttaagactgcgtacaatacac-caaatggtgggaccccttcccgaaccctacgtatgcaggag 14409047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 230
Target Start/End: Complemental strand, 17048914 - 17048812
Alignment:
Q  128 tgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccattt 227  Q
    ||||||||||||||||||  | |||||||||||| |||||||||  ||  ||||||| | | ||| |||| |||||||||||||||||  | ||||||||    
T  17048914 tgtaaaaaacagggtaaggttacgtacaatacaccaaaatggtggaaccccttcccggaacttgcttatgtaggagctttagtgaaccaagctgccattt 17048815  T
Q  228 ttt 230  Q
    |||    
T  17048814 ttt 17048812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 22699072 - 22699030
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaa 166  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  22699072 cttgtgtaaaaaacagggtaagactgcgtacaatacaccaaaa 22699030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 161
Target Start/End: Complemental strand, 23419776 - 23419739
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacac 161  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23419776 cttgtgtaaaaaacagggtaagactgcgtacaatacac 23419739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 230
Target Start/End: Complemental strand, 42391193 - 42391097
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttttt 230  Q
    ||||||||||||| |||||||||||||||  |||||||| |||  ||||||| | | ||| ||||| |||||| ||||| ||||||||||| ||||||    
T  42391193 aaaacagggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttttt 42391097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 184
Target Start/End: Original strand, 16341311 - 16341371
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccg 184  Q
    |||||||||||||||||||||| || |||||||||||| ||||||||| | | ||||||||    
T  16341311 cttgtgtaaaaaacagggtaaggctacgtacaatacaccaaaatggtgggccctcttcccg 16341371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 230
Target Start/End: Original strand, 43557505 - 43557613
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaa-aatggtgagacttcttcccgaatcgtgcgtatgcaggagc-tttagtgaaccgggttg 221  Q
    |||||||||||||||| ||||| ||||||||||||||| || ||||||| |||  | ||||| |   ||||||||| ||||| ||||||| |||||||||    
T  43557505 cttgtgtaaaaaacagagtaaggctgcgtacaatacaccaataatggtgggaccccctcccggactctgcgtatgcgggagcttttagtgcaccgggttg 43557604  T
Q  222 ccatttttt 230  Q
    || ||||||    
T  43557605 ccctttttt 43557613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 21172102 - 21172008
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttt 228  Q
    ||||||||||||| |||||||||||||||  |||||||| |||  ||||||| | | ||| ||||| |||||| ||||| ||||||||||| ||||    
T  21172102 aaaacagggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 21172008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 217
Target Start/End: Complemental strand, 14732920 - 14732831
Alignment:
Q  128 tgtaaaaaacagggtaagactgcgtacaatacactaaaa-tggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgg 217  Q
    |||||||||||||||||| |||||| |||||||| |||| |||||| ||| ||||||||| | ||  ||||| |||||||||||| |||||    
T  14732920 tgtaaaaaacagggtaaggctgcgt-caatacaccaaaaatggtgaaactccttcccgaaccctgtttatgcgggagctttagtgcaccgg 14732831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 230
Target Start/End: Complemental strand, 19426991 - 19426887
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    ||||||||||||| ||||||||||||||||||||||||  |||||||| |||  |||| || | | ||| |||||  |||||| |||| |||||||||||    
T  19426991 cttgtgtaaaaaatagggtaagactgcgtacaatacac-caaatggtgggac-ccttctcggaccctgcatatgcgagagcttcagtgcaccgggttgcc 19426894  T
Q  224 atttttt 230  Q
     ||||||    
T  19426893 ctttttt 19426887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 230
Target Start/End: Original strand, 32758301 - 32758397
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttttt 230  Q
    ||||||||||||| ||| ||||||||||| ||| ||||| |||  ||||||| | | ||| ||||| |||||| ||||| ||||||||||| ||||||    
T  32758301 aaaacagggtaaggctgtgtacaatacaccaaa-tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttttt 32758397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 229
Target Start/End: Original strand, 42798702 - 42798806
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    ||||||||||||||| |||||| |||||||||||||||  |||||||| |||   |||||| | | ||| ||||| |||||| ||||| | |||||||||    
T  42798702 cttgtgtaaaaaacaaggtaaggctgcgtacaatacac-caaatggtgggaccctttcccggaccctgcatatgcgggagctatagtgcatcgggttgcc 42798800  T
Q  224 attttt 229  Q
     |||||    
T  42798801 cttttt 42798806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 161
Target Start/End: Original strand, 46354227 - 46354264
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacac 161  Q
    |||||||||||||||||||||| |||||||||||||||    
T  46354227 cttgtgtaaaaaacagggtaaggctgcgtacaatacac 46354264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 216
Target Start/End: Original strand, 25434052 - 25434144
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccg 216  Q
    |||||| |||||||| ||||||| ||| ||||| |||| ||||||||  |||||||||  | | | ||||||||| |||||||||||| ||||    
T  25434052 cttgtgcaaaaaacatggtaagagtgcatacaacacaccaaaatggtatgacttcttcttggaccctgcgtatgcgggagctttagtgcaccg 25434144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 38604567 - 38604642
Alignment:
Q  132 aaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagcttta 208  Q
    |||||||||||||| |||||||||||||||  ||||||||||||  ||| ||| | | ||||||||| |||||||||    
T  38604567 aaaaacagggtaaggctgcgtacaatacac-caaatggtgagacccctttccggaccctgcgtatgcgggagcttta 38604642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 167
Target Start/End: Original strand, 7644989 - 7645032
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaat 167  Q
    |||||||||||||||||||||||  ||||||||||||| |||||    
T  7644989 cttgtgtaaaaaacagggtaagatagcgtacaatacaccaaaat 7645032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 223
Target Start/End: Original strand, 18747520 - 18747618
Alignment:
Q  125 ttgtgtaaaaaa-cagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    |||||||||||| ||||||||| ||||||| ||||||| ||  ||||| |||  ||||| ||| | ||||||||| |||||||||||| |||||| ||||    
T  18747520 ttgtgtaaaaaagcagggtaaggctgcgtataatacaccaat-tggtgggaccccttcctgaaccctgcgtatgcgggagctttagtgcaccgggctgcc 18747618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 31591202 - 31591108
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttt 228  Q
    ||||||| ||||| |||||||||||||| |||| ||||| |||  ||||||| | | ||| ||||| |||||| ||||| ||||||||||| ||||    
T  31591202 aaaacagagtaaggctgcgtacaatacaataaa-tggtgggaccccttcccggaccttgcatatgcgggagctctagtgcaccgggttgccctttt 31591108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 229
Target Start/End: Complemental strand, 39093532 - 39093437
Alignment:
Q  134 aaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccattttt 229  Q
    |||||||||||||||| ||||||||||| | ||| ||| ||   ||||||| | | ||| ||||||| |||||||||| |||||| |||| |||||    
T  39093532 aaacagggtaagactgtgtacaatacaccataatagtgggaacccttcccggaacttgcatatgcagaagctttagtgcaccgggctgcccttttt 39093437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 230
Target Start/End: Original strand, 1408490 - 1408595
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    ||||||||||||||| |||||| ||| ||||||||||   |||||||| |||  ||||||| | | ||||||||||| | |||||||  ||||| |||||    
T  1408490 cttgtgtaaaaaacaaggtaaggctgtgtacaataca-gcaaatggtgggaccccttcccggaccctgcgtatgcagaatctttagttcaccggattgcc 1408588  T
Q  224 atttttt 230  Q
     ||||||    
T  1408589 ttttttt 1408595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 229
Target Start/End: Complemental strand, 13792250 - 13792148
Alignment:
Q  127 gtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatt 226  Q
    |||||||||||  ||||||||||| ||||||||||  |||||| | |||  |||| |||| | ||||||||| |||||||| ||| |||| | |||| ||    
T  13792250 gtgtaaaaaacttggtaagactgcatacaatacacccaaatggcgggaccccttctcgaaccctgcgtatgctggagcttttgtgcaccgagctgccctt 13792151  T
Q  227 ttt 229  Q
    |||    
T  13792150 ttt 13792148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 19266482 - 19266520
Alignment:
Q  123 acttgtgtaaaaaacagggtaagactgcgtacaatacac 161  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  19266482 acttgcgtaaaaaacagggtaaggctgcgtacaatacac 19266520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 233
Target Start/End: Complemental strand, 27889395 - 27889310
Alignment:
Q  147 ctgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccattttttact 233  Q
    ||||||||||||||| ||| ||||| |||  ||||||| | | ||||||||| |||||||| ||  ||||||||||| |||||||||    
T  27889395 ctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcgtatgcgggagctttggtacaccgggttgcccttttttact 27889310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 230
Target Start/End: Complemental strand, 34626302 - 34626205
Alignment:
Q  132 aaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttttt 230  Q
    |||||||||||||| |||||| ||||||||  |||||||| ||   ||||||| | | ||||||||| |||||||||||  | ||||||||| ||||||    
T  34626302 aaaaacagggtaaggctgcgttcaatacac-caaatggtgggatcccttcccggaccctgcgtatgcgggagctttagttcatcgggttgccctttttt 34626205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 158
Target Start/End: Original strand, 35203472 - 35203506
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaata 158  Q
    ||||||||||||||||| |||||||||||||||||    
T  35203472 cttgtgtaaaaaacaggataagactgcgtacaata 35203506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 223
Target Start/End: Complemental strand, 48735215 - 48735126
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    |||||| |||||| |||||||||||||||  |||||||| |||  ||||||| | | ||| ||||| |||||| ||||| |||||||||||    
T  48735215 aaaacacggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcc 48735126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 229
Target Start/End: Original strand, 27629667 - 27629771
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    ||||||||||||||||||||||  |||||| |||||||  |||||||| |||  |||||||   | ||| ||||| | ||||| |||| |||||||||||    
T  27629667 cttgtgtaaaaaacagggtaaggttgcgtaaaatacac-caaatggtgggaccccttcccgggccctgcatatgcggtagcttcagtgcaccgggttgcc 27629765  T
Q  224 attttt 229  Q
     |||||    
T  27629766 cttttt 27629771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 230
Target Start/End: Original strand, 36602545 - 36602585
Alignment:
Q  190 tgcgtatgcaggagctttagtgaaccgggttgccatttttt 230  Q
    ||||||||| |||||||||||| ||||||||||| ||||||    
T  36602545 tgcgtatgcgggagctttagtgcaccgggttgccctttttt 36602585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 230
Target Start/End: Complemental strand, 24874 - 24769
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    |||||||||||||||||||||| |||||||||| ||||  |||||||| |||  ||||||||| | ||||||||| |||||||||||| | | |||||||    
T  24874 cttgtgtaaaaaacagggtaaggctgcgtacaacacac-caaatggtgggaccccttcccgaaccctgcgtatgcgggagctttagtgcagccggttgcc 24776  T
Q  224 atttttt 230  Q
     ||||||    
T  24775 ctttttt 24769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 230
Target Start/End: Original strand, 46864 - 46969
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    ||||||||||||| ||||||||  |||||||||||||| ||| ||||| |||  ||||||| | | ||||||||| |||||||||||| |||||||||||    
T  46864 cttgtgtaaaaaatagggtaaggttgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcc 46962  T
Q  224 atttttt 230  Q
     ||||||    
T  46963 ctttttt 46969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 223
Target Start/End: Original strand, 59010 - 59110
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaaatggtgagacttcttccc-gaatcgtgcgtatgcaggagctttagtgaaccgggttg 221  Q
    ||||| ||||||||||||||||||||||||||||||| | ||||||||| |||  |||||| || || ||||||||| |||||||||||| | |||||||    
T  59010 cttgtataaaaaacagggtaagactgcgtacaatacaccaaaaatggtgggaccccttcccagactc-tgcgtatgcgggagctttagtgcatcgggttg 59108  T
Q  222 cc 223  Q
    ||    
T  59109 cc 59110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 222
Target Start/End: Original strand, 10843 - 10940
Alignment:
Q  124 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgc 222  Q
    |||||||||||||||||||| | |||||| ||||||||  |||||||| |||  ||||||| | | ||||||||| |||||||||||| || |||||||    
T  10843 cttgtgtaaaaaacagggtagggctgcgtccaatacac-caaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcactgggttgc 10940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 48727 - 48633
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccatttt 228  Q
    ||||||||||||| |||||||||||||||  |||||||| |||  ||||||| | | ||| ||||| |||||| ||||| ||||||||||| ||||    
T  48727 aaaacagggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 48633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 229
Target Start/End: Original strand, 30619 - 30714
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgccattttt 229  Q
    ||||||||||| | ||||||||||||||| ||| ||||| |||  ||||||| | | ||| ||||| |||||| ||||| ||||||||||| |||||    
T  30619 aaaacagggtagggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttttt 30714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 223
Target Start/End: Complemental strand, 10143 - 10054
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    ||||||| |||||||||||||||||||||  |||| ||| |||  ||||||| | | ||| ||||||||||||  |||| |||||||||||    
T  10143 aaaacagagtaagactgcgtacaatacac-caaatagtgggaccccttcccggaccctgcatatgcaggagctccagtgcaccgggttgcc 10054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 223
Target Start/End: Complemental strand, 20471 - 20382
Alignment:
Q  133 aaaacagggtaagactgcgtacaatacactaaaatggtgagacttcttcccgaatcgtgcgtatgcaggagctttagtgaaccgggttgcc 223  Q
    ||||||| |||||||||||||||||||||  |||| ||| |||  ||||||| | | ||| ||||||||||||  |||| |||||||||||    
T  20471 aaaacagagtaagactgcgtacaatacac-caaatagtgggaccccttcccggaccctgcatatgcaggagctccagtgcaccgggttgcc 20382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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