View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20878_high_6 (Length: 239)

Name: NF20878_high_6
Description: NF20878
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20878_high_6
NF20878_high_6
[»] chr7 (3 HSPs)
chr7 (137-211)||(17299438-17299512)
chr7 (1-56)||(31659737-31659792)
chr7 (1-49)||(31660942-31660990)
[»] chr6 (3 HSPs)
chr6 (1-108)||(30495629-30495737)
chr6 (15-86)||(30494640-30494711)
chr6 (9-101)||(7316234-7316326)
[»] chr3 (9 HSPs)
chr3 (1-101)||(29931295-29931395)
chr3 (1-101)||(29980449-29980549)
chr3 (11-101)||(29932641-29932731)
chr3 (11-101)||(29981795-29981885)
chr3 (1-48)||(8456599-8456646)
chr3 (5-56)||(7758516-7758567)
chr3 (5-56)||(46492953-46493004)
chr3 (11-92)||(10583983-10584063)
chr3 (9-101)||(23770347-23770439)
[»] chr4 (5 HSPs)
chr4 (5-108)||(8896847-8896949)
chr4 (5-56)||(1289211-1289262)
chr4 (29-108)||(46638685-46638764)
chr4 (1-45)||(26420436-26420480)
chr4 (9-37)||(26421563-26421591)
[»] chr1 (6 HSPs)
chr1 (1-84)||(12389914-12389997)
chr1 (1-56)||(24422914-24422969)
chr1 (1-56)||(43377834-43377889)
chr1 (1-56)||(52275082-52275137)
chr1 (5-56)||(11437135-11437186)
chr1 (40-101)||(35066973-35067034)
[»] chr5 (8 HSPs)
chr5 (1-101)||(38834155-38834254)
chr5 (5-56)||(22940559-22940610)
chr5 (14-99)||(16788694-16788779)
chr5 (1-56)||(16650106-16650161)
chr5 (13-58)||(121459-121504)
chr5 (13-58)||(5504039-5504084)
chr5 (2-58)||(124422-124478)
chr5 (2-58)||(5503027-5503083)
[»] chr2 (3 HSPs)
chr2 (1-48)||(11257743-11257790)
chr2 (11-92)||(27553708-27553788)
chr2 (12-56)||(11258754-11258798)
[»] chr8 (1 HSPs)
chr8 (2-58)||(13883762-13883818)


Alignment Details
Target: chr7 (Bit Score: 67; Significance: 7e-30; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 17299438 - 17299512
Alignment:
Q  137 cataagagtgtttctttttccactatactaattttccatgtgtcttactgatttcggattatataatctcaaaaa 211  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17299438 catacgagtgtttctttttccactatactaattttccatgtgtcttactgatttcggattatataatctgaaaaa 17299512  T

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Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31659792 - 31659737
Alignment:
Q  1 ttatttatacacgtggcatgccacgcaggcgttgactgggtcaaaattcaccaaaa 56  Q
    ||||||| ||||||||||||||||||| |||||||||  ||||||||| |||||||    
T  31659792 ttatttacacacgtggcatgccacgcatgcgttgactatgtcaaaattgaccaaaa 31659737  T

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Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 31660942 - 31660990
Alignment:
Q  1 ttatttatacacgtggcatgccacgcaggcgttgactgggtcaaaattc 49  Q
    ||||||| || |||||||||||| ||| ||||||||| |||||||||||    
T  31660942 ttatttacacgcgtggcatgccatgcaagcgttgactaggtcaaaattc 31660990  T

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Target: chr6 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 30495629 - 30495737
Alignment:
Q  1 ttatttatacacgtggcatgccacgcaggcgttgactgggtcaaaattcaccaaaatggctattattgcaaaggtactaaatctta-aggggctaaaatt 99  Q
    ||||||| |||||||||||||||||||| |||||||| | ||||||||  |||| | | ||||||||||||| |  |||||||||| |||||| ||||||    
T  30495629 ttatttacacacgtggcatgccacgcagacgttgactagatcaaaattggccaagaggactattattgcaaatgggctaaatcttagaggggccaaaatt 30495728  T
Q  100 gttattttt 108  Q
    |||||||||    
T  30495729 gttattttt 30495737  T

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Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 30494711 - 30494640
Alignment:
Q  15 ggcatgccacgcaggcgttgactgggtcaaaattcaccaaaatggctattattgcaaaggtactaaatctta 86  Q
    ||||||||||||||||||||||||||||||||||  | || | | |||||||||||||||  ||||||||||    
T  30494711 ggcatgccacgcaggcgttgactgggtcaaaattggctaagaggactattattgcaaaggggctaaatctta 30494640  T

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Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 7316234 - 7316326
Alignment:
Q  9 acacgtggcatgccacgcaggcgttgactgggtcaaaattcaccaaaatggctattattgcaaaggtactaaatcttaaggggctaaaattgt 101  Q
    ||||||||| ||||||| ||||||||| |  ||||||||| ||||||| | | ||   ||||||||  |||||||||||||||| ||||||||    
T  7316234 acacgtggcttgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccatagatgcaaaggggctaaatcttaaggggccaaaattgt 7316326  T

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Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 29931395 - 29931295
Alignment:
Q  1 ttatttatacacgtggcatgccacgcaggcgttgactgggtcaaaattcaccaaaatggctattattgcaaaggtactaaatcttaaggggctaaaattg 100  Q
    ||||||| |||||||| ||||||  ||||||||||||| ||||||||| ||||||| | |||||||||||||||   ||||||||| ||||| |||||||    
T  29931395 ttatttacacacgtggaatgccatacaggcgttgactgtgtcaaaattgaccaaaaggactattattgcaaaggggttaaatcttagggggccaaaattg 29931296  T
Q  101 t 101  Q
    |    
T  29931295 t 29931295  T

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Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 29980549 - 29980449
Alignment:
Q  1 ttatttatacacgtggcatgccacgcaggcgttgactgggtcaaaattcaccaaaatggctattattgcaaaggtactaaatcttaaggggctaaaattg 100  Q
    ||||||| |||||||| ||||||  ||||||||||||| ||||||||| ||||||| | |||||||||||||||   ||||||||| ||||| |||||||    
T  29980549 ttatttacacacgtggaatgccatacaggcgttgactgtgtcaaaattgaccaaaaggactattattgcaaaggggttaaatcttagggggccaaaattg 29980450  T
Q  101 t 101  Q
    |    
T  29980449 t 29980449  T

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Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 29932641 - 29932731
Alignment:
Q  11 acgtggcatgccacgcaggcgttgactgggtcaaaattcaccaaaatggctattattgcaaaggtactaaatcttaaggggctaaaattgt 101  Q
    ||||||||||||| | || |||||||| ||||||||||  |||||| | ||||||||||||||| ||||||||||||||||  ||||||||    
T  29932641 acgtggcatgccaggaagacgttgactaggtcaaaattggccaaaaggactattattgcaaagggactaaatcttaaggggtcaaaattgt 29932731  T

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Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 29981795 - 29981885
Alignment:
Q  11 acgtggcatgccacgcaggcgttgactgggtcaaaattcaccaaaatggctattattgcaaaggtactaaatcttaaggggctaaaattgt 101  Q
    ||||||||||||| | || |||||||| ||||||||||  |||||| | ||||||||||||||| ||||||||||||||||  ||||||||    
T  29981795 acgtggcatgccaggaagacgttgactaggtcaaaattggccaaaaggactattattgcaaagggactaaatcttaaggggtcaaaattgt 29981885  T

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Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 8456646 - 8456599
Alignment:
Q  1 ttatttatacacgtggcatgccacgcaggcgttgactgggtcaaaatt 48  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  8456646 ttatttacacacgtggcatgccacgcaggcgttgactaggtcaaaatt 8456599  T

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Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 7758567 - 7758516
Alignment:
Q  5 ttatacacgtggcatgccacgcaggcgttgactgggtcaaaattcaccaaaa 56  Q
    ||||||||||||||||||||  | ||||||||| |||||||||| |||||||    
T  7758567 ttatacacgtggcatgccacttaagcgttgactaggtcaaaattgaccaaaa 7758516  T

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Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 46492953 - 46493004
Alignment:
Q  5 ttatacacgtggcatgccacgcaggcgttgactgggtcaaaattcaccaaaa 56  Q
    ||||||||||||  ||||||||| ||||||||| |||||||||| |||||||    
T  46492953 ttatacacgtggtctgccacgcatgcgttgactaggtcaaaattgaccaaaa 46493004  T

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Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 10583983 - 10584063
Alignment:
Q  11 acgtggcatgccacgcaggcgttgactgggtcaaaattcaccaaaatggctattattgcaaaggtactaaatcttaaggggc 92  Q
    ||||||||||||||  ||| ||||||| |||||||||| ||||||| ||  | |||||||||||  |||||||||| |||||    
T  10583983 acgtggcatgccacttaggtgttgacttggtcaaaattgaccaaaa-ggtcaatattgcaaaggggctaaatcttagggggc 10584063  T

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Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 23770347 - 23770439
Alignment:
Q  9 acacgtggcatgccacgcaggcgttgactgggtcaaaattcaccaaaatggctattattgcaaaggtactaaatcttaaggggctaaaattgt 101  Q
    ||||||||||||||||  | ||||||||| ||||||| || ||||||| | |||    ||||||||   ||||||||| ||||||||||||||    
T  23770347 acacgtggcatgccacatatgcgttgacttggtcaaagttgaccaaaaggactaaagatgcaaaggggttaaatcttagggggctaaaattgt 23770439  T

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Target: chr4 (Bit Score: 44; Significance: 4e-16; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 8896847 - 8896949
Alignment:
Q  5 ttatacacgtggcatgccacgcaggcgttgactgggtcaaaattcaccaaaatggctattattgcaaaggtactaaatcttaaggggctaaaattgttat 104  Q
    ||||||||||||||||||||  ||||||||||| |||||||||| ||||||| | | | |||||||||||  |||||||||||||| | |||||| | ||    
T  8896847 ttatacacgtggcatgccacttaggcgttgactcggtcaaaattgaccaaaaagtc-aatattgcaaaggggctaaatcttaagggaccaaaattatcat 8896945  T
Q  105 tttt 108  Q
    ||||    
T  8896946 tttt 8896949  T

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Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 1289262 - 1289211
Alignment:
Q  5 ttatacacgtggcatgccacgcaggcgttgactgggtcaaaattcaccaaaa 56  Q
    ||||||||||||||||||||  | ||||||||| |||||||||| |||||||    
T  1289262 ttatacacgtggcatgccacttaagcgttgactcggtcaaaattgaccaaaa 1289211  T

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Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 108
Target Start/End: Original strand, 46638685 - 46638764
Alignment:
Q  29 gcgttgactgggtcaaaattcaccaaaatggctattattgcaaaggtactaaatcttaaggggctaaaattgttattttt 108  Q
    |||||||||  ||||||||| | ||||| | |||   ||||||||| ||||||||||| |||||||||||||| ||||||    
T  46638685 gcgttgactttgtcaaaattgatcaaaaagactaaagttgcaaagggactaaatcttagggggctaaaattgtaattttt 46638764  T

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Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 26420480 - 26420436
Alignment:
Q  1 ttatttatacacgtggcatgccacgcaggcgttgactgggtcaaa 45  Q
    ||||||| ||||||| ||||||||||| ||||||||| |||||||    
T  26420480 ttatttacacacgtgacatgccacgcaagcgttgactaggtcaaa 26420436  T

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Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Original strand, 26421563 - 26421591
Alignment:
Q  9 acacgtggcatgccacgcaggcgttgact 37  Q
    |||||||||||||||||||||||||||||    
T  26421563 acacgtggcatgccacgcaggcgttgact 26421591  T

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Target: chr1 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 12389914 - 12389997
Alignment:
Q  1 ttatttatacacgtggcatgccacgcaggcgttgactgggtcaaaattcaccaaaatggctattattgcaaaggtactaaatct 84  Q
    ||||||| |||||||||||||||| ||| |||||| |||||||||||  | ||||| | |||||||||||||||  ||||||||    
T  12389914 ttatttacacacgtggcatgccacacagacgttgattgggtcaaaatagatcaaaaggactattattgcaaaggggctaaatct 12389997  T

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Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 24422969 - 24422914
Alignment:
Q  1 ttatttatacacgtggcatgccacgcaggcgttgactgggtcaaaattcaccaaaa 56  Q
    ||||||| |||||||||||||||| ||||||||||||  ||||||||| |||||||    
T  24422969 ttatttacacacgtggcatgccacacaggcgttgactatgtcaaaattgaccaaaa 24422914  T

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Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 43377889 - 43377834
Alignment:
Q  1 ttatttatacacgtggcatgccacgcaggcgttgactgggtcaaaattcaccaaaa 56  Q
    ||||||| |||||||||||||||| || ||||||||| |||||||||| |||||||    
T  43377889 ttatttacacacgtggcatgccacacatgcgttgacttggtcaaaattgaccaaaa 43377834  T

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Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 52275137 - 52275082
Alignment:
Q  1 ttatttatacacgtggcatgccacgcaggcgttgactgggtcaaaattcaccaaaa 56  Q
    ||||||| |||| ||||||||||||||||||||||||  ||||||||| |||||||    
T  52275137 ttatttacacacttggcatgccacgcaggcgttgactatgtcaaaattgaccaaaa 52275082  T

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Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 11437135 - 11437186
Alignment:
Q  5 ttatacacgtggcatgccacgcaggcgttgactgggtcaaaattcaccaaaa 56  Q
    ||||||||||||||||||||  | ||||||||| |||||||||| |||||||    
T  11437135 ttatacacgtggcatgccacttaagcgttgactcggtcaaaattgaccaaaa 11437186  T

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Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 35066973 - 35067034
Alignment:
Q  40 gtcaaaattcaccaaaatggctattattgcaaaggtactaaatcttaaggggctaaaattgt 101  Q
    ||||||||| ||||||| | |||||||||||||||  |||||| ||| ||||| ||||||||    
T  35066973 gtcaaaattgaccaaaaggactattattgcaaaggggctaaatattagggggccaaaattgt 35067034  T

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Target: chr5 (Bit Score: 37; Significance: 0.000000000005; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 38834254 - 38834155
Alignment:
Q  1 ttatttatacacgtggcatgccacgcaggcgttgactgggtcaaaattcaccaaaatggctattattgcaaaggtactaaatcttaaggggctaaaattg 100  Q
    |||||||||||| ||||||  || ||||||||||||    |||||||| | ||||| | ||||||||||||||| ||||||||||| || ||||||||||    
T  38834254 ttatttatacacatggcatatcatgcaggcgttgacata-tcaaaattgaacaaaaagactattattgcaaaggaactaaatcttagggagctaaaattg 38834156  T

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Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 22940559 - 22940610
Alignment:
Q  5 ttatacacgtggcatgccacgcaggcgttgactgggtcaaaattcaccaaaa 56  Q
    ||||||||||||||||||||  ||||||||||| |||||||||| |||||||    
T  22940559 ttatacacgtggcatgccacttaggcgttgacttggtcaaaattgaccaaaa 22940610  T

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Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 16788694 - 16788779
Alignment:
Q  14 tggcatgccacgcaggcgttgactgggtcaaaattcaccaaaatggctattattgcaaaggtactaaatcttaaggggctaaaatt 99  Q
    |||||||||||| ||| |||||||  ||||||||| || |||| | | | |||||||||| | ||||||||||| |||||||||||    
T  16788694 tggcatgccacgtaggagttgactcagtcaaaattgacaaaaaggaccactattgcaaagatgctaaatcttaaagggctaaaatt 16788779  T

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Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 16650161 - 16650106
Alignment:
Q  1 ttatttatacacgtggcatgccacgcaggcgttgactgggtcaaaattcaccaaaa 56  Q
    ||||||| |||||||||||||||| || || |||||| |||||||||| |||||||    
T  16650161 ttatttacacacgtggcatgccacacatgcattgacttggtcaaaattgaccaaaa 16650106  T

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Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 121504 - 121459
Alignment:
Q  13 gtggcatgccacgcaggcgttgactgggtcaaaattcaccaaaatg 58  Q
    ||||||||||||  ||||||||||| |||||||||| |||||||||    
T  121504 gtggcatgccacttaggcgttgacttggtcaaaattgaccaaaatg 121459  T

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Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 5504039 - 5504084
Alignment:
Q  13 gtggcatgccacgcaggcgttgactgggtcaaaattcaccaaaatg 58  Q
    ||||||||||||  ||||||||||| |||||||||| |||||||||    
T  5504039 gtggcatgccacttaggcgttgacttggtcaaaattgaccaaaatg 5504084  T

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Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 124422 - 124478
Alignment:
Q  2 tatttatacacgtggcatgccacgcaggcgttgactgggtcaaaattcaccaaaatg 58  Q
    |||||| ||| ||||||||||||  | ||||||||||||| |||||| |||||||||    
T  124422 tatttacacatgtggcatgccacataagcgttgactgggttaaaattgaccaaaatg 124478  T

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Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 5503083 - 5503027
Alignment:
Q  2 tatttatacacgtggcatgccacgcaggcgttgactgggtcaaaattcaccaaaatg 58  Q
    |||||| ||| ||||||||||||  | ||||||| |||||||||||| |||||||||    
T  5503083 tatttacacatgtggcatgccacataagcgttgattgggtcaaaattgaccaaaatg 5503027  T

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Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 11257790 - 11257743
Alignment:
Q  1 ttatttatacacgtggcatgccacgcaggcgttgactgggtcaaaatt 48  Q
    ||||||| |||||||||||||||||||||||||||||  |||||||||    
T  11257790 ttatttacacacgtggcatgccacgcaggcgttgactatgtcaaaatt 11257743  T

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Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 27553708 - 27553788
Alignment:
Q  11 acgtggcatgccacgcaggcgttgactgggtcaaaattcaccaaaatggctattattgcaaaggtactaaatcttaaggggc 92  Q
    ||||||||||||||  ||||||||||| |||||||||| ||||||| | | | |||||||||||  |||||||||| |||||    
T  27553708 acgtggcatgccacttaggcgttgactcggtcaaaattgaccaaaaggtcga-tattgcaaaggggctaaatcttagggggc 27553788  T

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Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 11258754 - 11258798
Alignment:
Q  12 cgtggcatgccacgcaggcgttgactgggtcaaaattcaccaaaa 56  Q
    |||||||||||| ||| ||||||||| |||||||||| |||||||    
T  11258754 cgtggcatgccatgcaagcgttgactaggtcaaaattgaccaaaa 11258798  T

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Target: chr8 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 13883762 - 13883818
Alignment:
Q  2 tatttatacacgtggcatgccacgcaggcgttgactgggtcaaaattcaccaaaatg 58  Q
    |||||| ||| ||||||||||||  | ||||||||||| |||||||| |||||||||    
T  13883762 tatttacacatgtggcatgccacataagcgttgactggatcaaaattgaccaaaatg 13883818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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