View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2087_high_13 (Length: 321)

Name: NF2087_high_13
Description: NF2087
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2087_high_13
NF2087_high_13
[»] chr3 (63 HSPs)
chr3 (16-303)||(35311895-35312158)
chr3 (30-165)||(10954911-10955048)
chr3 (13-153)||(55401048-55401188)
chr3 (46-168)||(26492184-26492306)
chr3 (30-153)||(28917974-28918099)
chr3 (67-151)||(14216867-14216951)
chr3 (67-151)||(14222996-14223080)
chr3 (13-168)||(20503429-20503578)
chr3 (63-153)||(8587017-8587107)
chr3 (66-153)||(10335285-10335372)
chr3 (63-150)||(16000012-16000099)
chr3 (19-168)||(40993287-40993431)
chr3 (70-168)||(26508068-26508166)
chr3 (67-168)||(41961650-41961752)
chr3 (83-168)||(14979139-14979224)
chr3 (63-164)||(25775468-25775572)
chr3 (67-153)||(750618-750705)
chr3 (67-153)||(15796294-15796380)
chr3 (63-152)||(8383231-8383320)
chr3 (19-143)||(18426932-18427056)
chr3 (19-153)||(23657713-23657846)
chr3 (67-168)||(34910280-34910376)
chr3 (63-126)||(51206349-51206412)
chr3 (75-153)||(3164033-3164111)
chr3 (67-153)||(14829663-14829748)
chr3 (66-140)||(21479104-21479178)
chr3 (63-153)||(35994735-35994823)
chr3 (70-139)||(4987294-4987363)
chr3 (63-148)||(10268482-10268567)
chr3 (63-168)||(32400704-32400808)
chr3 (67-127)||(14209112-14209172)
chr3 (67-168)||(28812478-28812574)
chr3 (67-126)||(1509539-1509598)
chr3 (46-153)||(7171475-7171581)
chr3 (67-168)||(9799995-9800099)
chr3 (68-153)||(3610606-3610691)
chr3 (67-160)||(14747526-14747621)
chr3 (20-153)||(25093475-25093608)
chr3 (67-140)||(34185123-34185196)
chr3 (13-102)||(35222962-35223051)
chr3 (63-119)||(7928457-7928513)
chr3 (66-146)||(10318034-10318113)
chr3 (68-168)||(22774071-22774166)
chr3 (67-127)||(27505245-27505305)
chr3 (67-119)||(49651786-49651838)
chr3 (63-102)||(8593161-8593200)
chr3 (71-126)||(21256990-21257045)
chr3 (67-146)||(25948887-25948966)
chr3 (52-102)||(3865698-3865748)
chr3 (63-153)||(24205038-24205127)
chr3 (74-119)||(11610528-11610573)
chr3 (67-140)||(39756222-39756295)
chr3 (69-146)||(55212943-55213020)
chr3 (66-154)||(38731190-38731278)
chr3 (47-102)||(2941582-2941637)
chr3 (67-150)||(4990967-4991050)
chr3 (13-119)||(11251985-11252089)
chr3 (67-118)||(16789020-16789071)
chr3 (58-169)||(8789541-8789653)
chr3 (91-168)||(40052296-40052367)
chr3 (82-147)||(11493376-11493441)
chr3 (67-144)||(14832081-14832158)
chr3 (46-102)||(13845504-13845560)
[»] chr6 (73 HSPs)
chr6 (13-168)||(34595091-34595247)
chr6 (67-168)||(10770674-10770775)
chr6 (13-146)||(17841535-17841668)
chr6 (16-167)||(16833267-16833418)
chr6 (13-160)||(12696290-12696442)
chr6 (67-151)||(8365519-8365603)
chr6 (58-154)||(8776964-8777060)
chr6 (67-153)||(16766670-16766756)
chr6 (20-146)||(28152079-28152204)
chr6 (20-152)||(7977783-7977915)
chr6 (31-151)||(9658854-9658974)
chr6 (63-161)||(426510-426609)
chr6 (47-153)||(853839-853945)
chr6 (67-153)||(9107370-9107456)
chr6 (75-154)||(17435171-17435250)
chr6 (13-150)||(4877918-4878055)
chr6 (13-154)||(33001235-33001376)
chr6 (66-168)||(7801155-7801259)
chr6 (19-151)||(23771554-23771685)
chr6 (13-140)||(24645466-24645594)
chr6 (13-168)||(32511612-32511767)
chr6 (63-153)||(7938089-7938179)
chr6 (67-168)||(7027197-7027301)
chr6 (31-119)||(28715302-28715390)
chr6 (72-160)||(31959125-31959213)
chr6 (67-150)||(3398595-3398677)
chr6 (63-154)||(6898277-6898368)
chr6 (69-120)||(9522897-9522948)
chr6 (68-151)||(15489733-15489816)
chr6 (66-153)||(3209355-3209442)
chr6 (67-125)||(9911528-9911587)
chr6 (47-166)||(13789114-13789233)
chr6 (47-166)||(13797733-13797852)
chr6 (13-127)||(32978845-32978960)
chr6 (79-145)||(2224207-2224273)
chr6 (67-153)||(9027151-9027237)
chr6 (46-127)||(1191679-1191760)
chr6 (73-150)||(1681734-1681811)
chr6 (63-116)||(1700362-1700415)
chr6 (67-140)||(5970108-5970181)
chr6 (68-148)||(19044442-19044522)
chr6 (67-119)||(31384927-31384979)
chr6 (63-118)||(403860-403915)
chr6 (73-168)||(2117035-2117129)
chr6 (63-142)||(7265589-7265668)
chr6 (13-152)||(13360319-13360457)
chr6 (63-150)||(13851712-13851799)
chr6 (63-98)||(16388213-16388248)
chr6 (63-152)||(5732506-5732595)
chr6 (13-102)||(7378003-7378092)
chr6 (67-131)||(8713974-8714039)
chr6 (13-78)||(10294166-10294231)
chr6 (74-146)||(17302536-17302609)
chr6 (63-100)||(26402676-26402713)
chr6 (20-168)||(32298560-32298709)
chr6 (67-143)||(7930288-7930364)
chr6 (63-119)||(21924931-21924987)
chr6 (58-168)||(5626687-5626797)
chr6 (74-149)||(17341671-17341746)
chr6 (58-137)||(19040341-19040420)
chr6 (63-143)||(27904032-27904114)
chr6 (66-152)||(9629357-9629443)
chr6 (13-161)||(17327596-17327750)
chr6 (67-168)||(34073347-34073449)
chr6 (32-89)||(1315969-1316026)
chr6 (63-100)||(6751878-6751915)
chr6 (13-78)||(10339060-10339125)
chr6 (67-100)||(21395308-21395341)
chr6 (47-127)||(25010179-25010262)
chr6 (67-115)||(7973665-7973713)
chr6 (67-119)||(9025494-9025546)
chr6 (82-146)||(16388248-16388311)
chr6 (68-119)||(31429004-31429056)
[»] chr5 (54 HSPs)
chr5 (13-168)||(21576691-21576848)
chr5 (13-153)||(21191002-21191142)
chr5 (63-153)||(6247595-6247685)
chr5 (13-168)||(4105214-4105372)
chr5 (67-153)||(13287399-13287485)
chr5 (63-168)||(14422862-14422965)
chr5 (67-153)||(21522723-21522809)
chr5 (67-153)||(21533289-21533375)
chr5 (63-137)||(33178014-33178088)
chr5 (64-166)||(8419985-8420089)
chr5 (67-151)||(21542005-21542089)
chr5 (58-153)||(24906292-24906387)
chr5 (72-146)||(14674249-14674323)
chr5 (66-153)||(15382450-15382539)
chr5 (67-145)||(19579682-19579760)
chr5 (19-140)||(31084309-31084435)
chr5 (13-146)||(43564863-43564994)
chr5 (68-141)||(21351906-21351979)
chr5 (67-168)||(41633693-41633794)
chr5 (67-143)||(39698524-39698600)
chr5 (19-127)||(42893359-42893467)
chr5 (67-142)||(10298553-10298628)
chr5 (67-150)||(37328844-37328927)
chr5 (58-127)||(15883986-15884056)
chr5 (70-168)||(43001763-43001856)
chr5 (19-168)||(28588626-28588774)
chr5 (68-160)||(30135279-30135372)
chr5 (67-140)||(30183535-30183608)
chr5 (68-153)||(36642763-36642848)
chr5 (71-131)||(7218271-7218331)
chr5 (63-161)||(6326293-6326392)
chr5 (69-148)||(17177025-17177104)
chr5 (13-152)||(26312743-26312882)
chr5 (67-167)||(11685898-11685998)
chr5 (67-127)||(7677704-7677764)
chr5 (82-153)||(22013387-22013458)
chr5 (105-170)||(6072352-6072417)
chr5 (30-119)||(30502351-30502440)
chr5 (30-119)||(30542694-30542783)
chr5 (67-168)||(2436879-2436981)
chr5 (58-146)||(16203786-16203874)
chr5 (86-150)||(19552562-19552626)
chr5 (74-152)||(15405062-15405138)
chr5 (13-100)||(27932261-27932348)
chr5 (70-148)||(41995449-41995525)
chr5 (13-146)||(6770523-6770649)
chr5 (63-100)||(2548413-2548450)
chr5 (74-126)||(17088284-17088337)
chr5 (46-99)||(30099017-30099070)
chr5 (87-148)||(40000555-40000616)
chr5 (71-127)||(12159951-12160007)
chr5 (67-143)||(12641657-12641733)
chr5 (19-102)||(23015936-23016024)
chr5 (136-168)||(39758244-39758276)
[»] chr7 (63 HSPs)
chr7 (13-153)||(13770664-13770809)
chr7 (13-160)||(24105644-24105791)
chr7 (38-153)||(25481875-25481990)
chr7 (67-153)||(24339615-24339701)
chr7 (15-151)||(26733279-26733415)
chr7 (13-152)||(43027410-43027554)
chr7 (46-168)||(15680772-15680889)
chr7 (67-153)||(27945014-27945100)
chr7 (58-151)||(33994187-33994280)
chr7 (13-153)||(21864779-21864921)
chr7 (63-153)||(11061072-11061162)
chr7 (13-153)||(5409777-5409922)
chr7 (13-151)||(18212979-18213118)
chr7 (13-168)||(32287409-32287567)
chr7 (13-151)||(598183-598321)
chr7 (63-145)||(7197293-7197375)
chr7 (67-127)||(3991323-3991383)
chr7 (19-119)||(27093365-27093465)
chr7 (19-119)||(27184836-27184936)
chr7 (49-140)||(5835233-5835324)
chr7 (69-168)||(15902780-15902879)
chr7 (67-146)||(18215186-18215265)
chr7 (13-100)||(21880178-21880265)
chr7 (19-119)||(1401032-1401130)
chr7 (67-168)||(2334205-2334309)
chr7 (58-127)||(8234145-8234214)
chr7 (67-140)||(9408334-9408407)
chr7 (67-118)||(18039006-18039058)
chr7 (63-119)||(19213810-19213866)
chr7 (71-119)||(26033465-26033513)
chr7 (68-127)||(7438705-7438764)
chr7 (67-126)||(9778500-9778559)
chr7 (67-102)||(21560527-21560562)
chr7 (67-125)||(32094020-32094079)
chr7 (67-138)||(11272586-11272659)
chr7 (76-153)||(13557750-13557830)
chr7 (69-139)||(41020483-41020553)
chr7 (67-168)||(10042895-10042996)
chr7 (63-100)||(28155596-28155633)
chr7 (110-167)||(28401102-28401159)
chr7 (90-165)||(11722121-11722197)
chr7 (63-151)||(21826248-21826336)
chr7 (63-143)||(23191879-23191959)
chr7 (73-168)||(43249950-43250046)
chr7 (133-168)||(11700769-11700804)
chr7 (67-126)||(19992001-19992060)
chr7 (67-150)||(21140982-21141065)
chr7 (86-160)||(2034407-2034481)
chr7 (82-152)||(5235960-5236030)
chr7 (68-126)||(11665441-11665499)
chr7 (67-140)||(6630912-6630985)
chr7 (67-148)||(18013074-18013155)
chr7 (68-164)||(19206011-19206108)
chr7 (67-96)||(25822685-25822714)
chr7 (63-100)||(25956471-25956508)
chr7 (13-102)||(39138468-39138557)
chr7 (67-151)||(6028600-6028684)
chr7 (67-119)||(7058433-7058485)
chr7 (63-119)||(20549798-20549854)
chr7 (82-154)||(22868014-22868086)
chr7 (105-145)||(29999061-29999101)
chr7 (67-127)||(35861963-35862023)
chr7 (63-95)||(40287353-40287385)
[»] chr1 (76 HSPs)
chr1 (13-150)||(42359395-42359532)
chr1 (63-168)||(19058852-19058958)
chr1 (46-168)||(46348362-46348479)
chr1 (13-142)||(37598816-37598944)
chr1 (58-160)||(38078652-38078756)
chr1 (72-168)||(48450592-48450688)
chr1 (13-161)||(1486650-1486804)
chr1 (21-143)||(1815240-1815362)
chr1 (74-168)||(14359529-14359622)
chr1 (68-168)||(28273089-28273189)
chr1 (67-151)||(47989473-47989556)
chr1 (58-168)||(51409982-51410093)
chr1 (13-168)||(5898212-5898367)
chr1 (58-140)||(22881607-22881689)
chr1 (13-117)||(18337338-18337442)
chr1 (67-168)||(24577186-24577288)
chr1 (63-168)||(35702584-35702690)
chr1 (13-144)||(22515833-22515964)
chr1 (67-153)||(5376500-5376586)
chr1 (67-153)||(6612171-6612257)
chr1 (20-126)||(18190061-18190167)
chr1 (67-153)||(31694710-31694796)
chr1 (63-168)||(36878418-36878524)
chr1 (67-153)||(5944254-5944342)
chr1 (67-168)||(9629900-9630001)
chr1 (67-127)||(1704992-1705052)
chr1 (30-154)||(2896084-2896208)
chr1 (13-153)||(5927286-5927426)
chr1 (19-127)||(40258885-40258993)
chr1 (63-151)||(41877466-41877554)
chr1 (82-153)||(398780-398851)
chr1 (67-146)||(18556456-18556535)
chr1 (71-153)||(48040465-48040548)
chr1 (71-161)||(18471262-18471355)
chr1 (63-141)||(31672891-31672969)
chr1 (67-136)||(113289-113358)
chr1 (13-153)||(16297227-16297369)
chr1 (69-157)||(21378547-21378635)
chr1 (69-168)||(32434718-32434814)
chr1 (67-153)||(40917724-40917808)
chr1 (46-153)||(30749815-30749920)
chr1 (46-153)||(30771266-30771371)
chr1 (72-149)||(31015020-31015097)
chr1 (63-151)||(9103615-9103702)
chr1 (75-150)||(13011223-13011299)
chr1 (63-99)||(24334701-24334737)
chr1 (13-61)||(43112999-43113047)
chr1 (67-126)||(6332671-6332729)
chr1 (67-168)||(17778515-17778605)
chr1 (67-153)||(20157350-20157436)
chr1 (63-151)||(9709795-9709883)
chr1 (69-153)||(10572591-10572675)
chr1 (13-153)||(10577681-10577821)
chr1 (82-150)||(16927200-16927268)
chr1 (74-146)||(29144365-29144437)
chr1 (30-78)||(32461416-32461464)
chr1 (67-154)||(6427322-6427409)
chr1 (82-144)||(9033022-9033085)
chr1 (69-140)||(13997869-13997940)
chr1 (74-153)||(15323136-15323215)
chr1 (63-102)||(21620979-21621018)
chr1 (63-118)||(52903257-52903312)
chr1 (67-101)||(2218264-2218298)
chr1 (29-119)||(11605897-11605987)
chr1 (21-119)||(40181878-40181976)
chr1 (67-100)||(30173762-30173795)
chr1 (82-151)||(34298411-34298480)
chr1 (63-127)||(1864876-1864940)
chr1 (63-131)||(7988447-7988515)
chr1 (63-119)||(13436465-13436521)
chr1 (85-153)||(15641048-15641116)
chr1 (13-57)||(15765827-15765871)
chr1 (82-138)||(19324550-19324606)
chr1 (68-168)||(27471567-27471667)
chr1 (46-102)||(29163360-29163416)
chr1 (77-153)||(37055866-37055942)
[»] chr4 (57 HSPs)
chr4 (13-153)||(23292932-23293072)
chr4 (46-168)||(12797317-12797438)
chr4 (19-168)||(49430983-49431133)
chr4 (13-168)||(21945460-21945616)
chr4 (13-127)||(2361921-2362035)
chr4 (27-157)||(34306764-34306893)
chr4 (67-151)||(19482643-19482727)
chr4 (75-151)||(11651142-11651218)
chr4 (75-151)||(27706185-27706261)
chr4 (19-119)||(28964200-28964300)
chr4 (67-146)||(30298926-30299006)
chr4 (67-146)||(30327794-30327874)
chr4 (52-126)||(54580008-54580082)
chr4 (20-153)||(12895227-12895360)
chr4 (13-102)||(35161060-35161149)
chr4 (30-154)||(40481609-40481737)
chr4 (13-160)||(3947707-3947859)
chr4 (13-153)||(35157931-35158071)
chr4 (27-127)||(38846972-38847072)
chr4 (82-168)||(22440615-22440701)
chr4 (13-126)||(4157150-4157262)
chr4 (67-140)||(11596352-11596425)
chr4 (58-119)||(29205451-29205512)
chr4 (67-143)||(4383351-4383426)
chr4 (67-153)||(28084494-28084581)
chr4 (63-102)||(42640553-42640592)
chr4 (13-127)||(715551-715668)
chr4 (13-127)||(752877-752994)
chr4 (30-119)||(8423681-8423770)
chr4 (30-102)||(9996864-9996936)
chr4 (63-99)||(16073421-16073457)
chr4 (73-151)||(20633460-20633535)
chr4 (58-146)||(40179627-40179715)
chr4 (63-102)||(6879461-6879500)
chr4 (67-146)||(12895116-12895194)
chr4 (68-131)||(24613702-24613765)
chr4 (74-152)||(14126118-14126196)
chr4 (66-140)||(15029751-15029825)
chr4 (70-168)||(24543943-24544038)
chr4 (69-118)||(6485613-6485662)
chr4 (67-152)||(16303266-16303351)
chr4 (67-168)||(50280839-50280942)
chr4 (58-102)||(4157460-4157504)
chr4 (67-151)||(30838185-30838269)
chr4 (71-146)||(26504303-26504378)
chr4 (68-118)||(28000743-28000794)
chr4 (82-153)||(36635297-36635368)
chr4 (63-101)||(482234-482272)
chr4 (13-79)||(12323967-12324033)
chr4 (67-151)||(12708121-12708206)
chr4 (46-100)||(13307903-13307957)
chr4 (46-152)||(31800457-31800563)
chr4 (68-153)||(847924-848009)
chr4 (20-61)||(4136280-4136321)
chr4 (77-154)||(28720848-28720924)
chr4 (67-167)||(35723384-35723484)
chr4 (142-170)||(30093997-30094025)
[»] chr2 (61 HSPs)
chr2 (13-168)||(18840959-18841114)
chr2 (58-168)||(30404841-30404951)
chr2 (13-148)||(15972851-15972986)
chr2 (67-153)||(18421936-18422022)
chr2 (63-153)||(19536393-19536484)
chr2 (13-168)||(37558940-37559090)
chr2 (13-168)||(38117105-38117261)
chr2 (13-126)||(2438665-2438778)
chr2 (67-152)||(20539674-20539759)
chr2 (13-154)||(28596444-28596582)
chr2 (13-151)||(20242673-20242811)
chr2 (52-148)||(6940233-6940329)
chr2 (73-161)||(12940941-12941029)
chr2 (13-154)||(21091695-21091836)
chr2 (63-147)||(20473301-20473385)
chr2 (63-150)||(21624242-21624330)
chr2 (67-153)||(15657837-15657923)
chr2 (67-153)||(36756344-36756430)
chr2 (27-154)||(23717998-23718118)
chr2 (27-154)||(24105670-24105790)
chr2 (13-168)||(12224178-12224336)
chr2 (52-102)||(5040758-5040808)
chr2 (19-151)||(14996171-14996308)
chr2 (75-145)||(24894370-24894440)
chr2 (74-160)||(21374706-21374794)
chr2 (67-151)||(23058442-23058527)
chr2 (67-127)||(974746-974806)
chr2 (30-118)||(29176456-29176544)
chr2 (67-151)||(30335392-30335476)
chr2 (67-147)||(30717530-30717610)
chr2 (67-123)||(33153427-33153483)
chr2 (67-168)||(37419705-37419802)
chr2 (74-146)||(39323244-39323316)
chr2 (82-168)||(27286307-27286393)
chr2 (68-160)||(11223864-11223956)
chr2 (63-118)||(18255976-18256031)
chr2 (67-137)||(12668423-12668493)
chr2 (82-168)||(36409642-36409728)
chr2 (82-151)||(21616737-21616806)
chr2 (13-78)||(35056927-35056992)
chr2 (58-102)||(5367216-5367260)
chr2 (82-146)||(16069269-16069333)
chr2 (68-140)||(26769497-26769569)
chr2 (67-151)||(34784982-34785066)
chr2 (66-102)||(44635522-44635558)
chr2 (105-168)||(6290115-6290178)
chr2 (63-98)||(27460065-27460100)
chr2 (19-77)||(19942314-19942372)
chr2 (82-152)||(21782833-21782903)
chr2 (63-153)||(31018563-31018653)
chr2 (13-119)||(37411190-37411296)
chr2 (67-145)||(38442289-38442366)
chr2 (46-100)||(43585984-43586038)
chr2 (68-153)||(18276494-18276579)
chr2 (82-151)||(28412325-28412394)
chr2 (82-154)||(28677880-28677953)
chr2 (67-100)||(33884077-33884110)
chr2 (67-119)||(18622613-18622665)
chr2 (140-168)||(24009266-24009294)
chr2 (63-119)||(34691801-34691857)
chr2 (63-119)||(34714213-34714269)
[»] scaffold0652 (1 HSPs)
scaffold0652 (13-150)||(408-545)
[»] chr8 (57 HSPs)
chr8 (63-168)||(20873027-20873132)
chr8 (13-168)||(36450700-36450850)
chr8 (64-168)||(22595951-22596056)
chr8 (13-143)||(5813575-5813705)
chr8 (67-153)||(22651949-22652035)
chr8 (67-152)||(2572056-2572141)
chr8 (69-153)||(29510306-29510390)
chr8 (75-151)||(41838131-41838207)
chr8 (13-168)||(8342931-8343080)
chr8 (13-156)||(18407690-18407832)
chr8 (70-153)||(25192350-25192433)
chr8 (63-168)||(18170478-18170584)
chr8 (63-168)||(18634046-18634152)
chr8 (63-119)||(4948659-4948715)
chr8 (67-143)||(15816129-15816205)
chr8 (67-126)||(25566841-25566900)
chr8 (13-119)||(3025558-3025664)
chr8 (67-153)||(13436964-13437050)
chr8 (68-153)||(22197743-22197828)
chr8 (63-127)||(24613520-24613583)
chr8 (46-153)||(926767-926874)
chr8 (53-140)||(4786324-4786411)
chr8 (58-153)||(31556970-31557064)
chr8 (19-102)||(40332215-40332298)
chr8 (68-154)||(4298887-4298973)
chr8 (67-153)||(8343289-8343375)
chr8 (67-153)||(28745471-28745557)
chr8 (65-119)||(30077385-30077439)
chr8 (68-153)||(4673426-4673511)
chr8 (67-160)||(24669399-24669492)
chr8 (63-143)||(34897068-34897148)
chr8 (19-98)||(15023209-15023288)
chr8 (13-72)||(16641915-16641974)
chr8 (68-131)||(29447111-29447174)
chr8 (67-142)||(30271291-30271366)
chr8 (63-143)||(22204622-22204704)
chr8 (13-153)||(24857982-24858129)
chr8 (82-168)||(29775994-29776080)
chr8 (63-151)||(3677761-3677849)
chr8 (30-102)||(3951499-3951571)
chr8 (63-166)||(13844592-13844689)
chr8 (68-140)||(20679396-20679468)
chr8 (63-99)||(30271251-30271287)
chr8 (82-150)||(36934646-36934714)
chr8 (46-102)||(43737790-43737846)
chr8 (67-150)||(11927086-11927169)
chr8 (46-101)||(33405363-33405418)
chr8 (68-168)||(14134662-14134757)
chr8 (73-127)||(41831946-41832000)
chr8 (52-165)||(9414860-9414973)
chr8 (69-150)||(11803235-11803316)
chr8 (13-78)||(22652035-22652100)
chr8 (72-153)||(27213520-27213601)
chr8 (58-126)||(31514872-31514941)
chr8 (77-153)||(28642381-28642457)
chr8 (13-77)||(29447045-29447109)
chr8 (30-118)||(31580090-31580178)
[»] scaffold0053 (1 HSPs)
scaffold0053 (13-153)||(8771-8911)
[»] scaffold0223 (1 HSPs)
scaffold0223 (67-153)||(20145-20231)
[»] scaffold0083 (1 HSPs)
scaffold0083 (46-153)||(45509-45617)
[»] scaffold0050 (1 HSPs)
scaffold0050 (46-165)||(70238-70358)
[»] scaffold0306 (1 HSPs)
scaffold0306 (13-168)||(13351-13519)
[»] scaffold0152 (1 HSPs)
scaffold0152 (13-168)||(21808-21976)
[»] scaffold0027 (1 HSPs)
scaffold0027 (67-153)||(46655-46741)
[»] scaffold0018 (2 HSPs)
scaffold0018 (68-153)||(178819-178905)
scaffold0018 (74-160)||(192256-192342)
[»] scaffold0003 (2 HSPs)
scaffold0003 (67-168)||(241551-241653)
scaffold0003 (13-56)||(236920-236963)
[»] scaffold0171 (2 HSPs)
scaffold0171 (67-160)||(23386-23479)
scaffold0171 (67-153)||(23483-23570)
[»] scaffold0103 (1 HSPs)
scaffold0103 (75-167)||(51769-51862)
[»] scaffold0722 (1 HSPs)
scaffold0722 (63-143)||(7028-7108)
[»] scaffold0136 (1 HSPs)
scaffold0136 (67-151)||(3849-3933)
[»] scaffold0122 (2 HSPs)
scaffold0122 (67-153)||(8639-8725)
scaffold0122 (20-127)||(8009-8115)
[»] scaffold0246 (1 HSPs)
scaffold0246 (30-154)||(19548-19676)
[»] scaffold0021 (1 HSPs)
scaffold0021 (70-153)||(130455-130538)
[»] scaffold0475 (1 HSPs)
scaffold0475 (13-96)||(3338-3421)
[»] scaffold0361 (1 HSPs)
scaffold0361 (46-127)||(14529-14607)
[»] scaffold0019 (1 HSPs)
scaffold0019 (67-168)||(71680-71784)
[»] scaffold0793 (1 HSPs)
scaffold0793 (13-127)||(4827-4944)
[»] scaffold0011 (1 HSPs)
scaffold0011 (68-126)||(17750-17808)
[»] scaffold0512 (1 HSPs)
scaffold0512 (13-89)||(4982-5058)
[»] scaffold0450 (1 HSPs)
scaffold0450 (67-127)||(8635-8695)
[»] scaffold0025 (1 HSPs)
scaffold0025 (67-118)||(23777-23829)
[»] scaffold0004 (3 HSPs)
scaffold0004 (68-139)||(123612-123686)
scaffold0004 (74-143)||(92790-92859)
scaffold0004 (67-114)||(83172-83219)
[»] scaffold0009 (2 HSPs)
scaffold0009 (30-100)||(174516-174586)
scaffold0009 (30-100)||(180029-180099)
[»] scaffold0008 (1 HSPs)
scaffold0008 (67-148)||(263372-263453)
[»] scaffold0007 (1 HSPs)
scaffold0007 (73-153)||(225274-225354)
[»] scaffold0049 (1 HSPs)
scaffold0049 (63-153)||(63745-63836)
[»] scaffold0036 (1 HSPs)
scaffold0036 (13-56)||(35692-35735)
[»] scaffold0066 (1 HSPs)
scaffold0066 (79-168)||(33375-33463)
[»] scaffold0279 (1 HSPs)
scaffold0279 (136-168)||(17736-17768)
[»] scaffold0044 (1 HSPs)
scaffold0044 (70-102)||(53204-53236)


Alignment Details
Target: chr3 (Bit Score: 166; Significance: 8e-89; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 16 - 303
Target Start/End: Complemental strand, 35312158 - 35311895
Alignment:
Q  16 acagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaatta 115  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||||| ||||||||      |||||||||||||||||||||| ||||||||||||||    
T  35312158 acagacactcttcagattaggtgtgtctcagtgtcagacatatgtcttatccgacac------ttgtaattacactgaattatgtaacatttttaaatta 35312065  T
Q  116 ttagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcatactattggttatttataagttgaattttaatttttcatggcctcttaa 215  Q
    ||| |||||||||| |||||||||||||||||||||| |                  |||||||||||||||||||||||||||||||||||||| ||||    
T  35312064 ttaaatgtgtcgacatatcagtgtccgtgtcgtgtcctt------------------tggttatttataagttgaattttaatttttcatggccttttaa 35311983  T
Q  216 atgagtgatttaataattaaaattatgtttgtaactgggatggttgtgtcactaactctcccataatagtattcgtgtatgactttac 303  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35311982 ttgagtgatttaataattaaaattatgtttgtaactgggatggttgtgtcactaactctcccataatagtattcgtgtatgactttac 35311895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 30 - 165
Target Start/End: Complemental strand, 10955048 - 10954911
Alignment:
Q  30 gattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgac 129  Q
    ||||||| |||| |||||||| ||||| |||| |||||||||||||||||||| |||||||||||||||||||  |||| |||||||||| ||||||| |    
T  10955048 gattaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccgacacttgtgattacactgaattatgtgattttttcaaattattagttgtgtcggc 10954949  T
Q  130 gtatcagtgtccgtgtc--gtgtccgtatccgtgcttc 165  Q
    || ||||||| ||||||  |||||||||||||||||||    
T  10954948 gtgtcagtgttcgtgtccggtgtccgtatccgtgcttc 10954911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 55401188 - 55401048
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| ||||||| || ||||||| ||||  | ||||| ||||| |||| ||||||||||||||||||||||||||||| ||||||||||  |||| |||    
T  55401188 agcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaa 55401089  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||||| ||||||| |||||||||||||||||||| ||||    
T  55401088 ttattagttgtgtcggcgtatcagtgtccgtgtcgtatccg 55401048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 46 - 168
Target Start/End: Original strand, 26492184 - 26492306
Alignment:
Q  46 gtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgt 145  Q
    ||||||||||  |||| ||||||||||||| |||||||||||||||||||| | |||  |||| |||||||||| | ||||| ||| |||||||||||||    
T  26492184 gtgtcagacatgtgtcgtgtccgacaccgatacttgtaattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccgtgt 26492283  T
Q  146 cgtgtccgtatccgtgcttcata 168  Q
    ||||||||||| |||||||||||    
T  26492284 cgtgtccgtattcgtgcttcata 26492306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 30 - 153
Target Start/End: Complemental strand, 28918099 - 28917974
Alignment:
Q  30 gattaggtgtgttccagtgtcagacacatgtcttgtcc--gacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcg 127  Q
    ||||||| |||| |||||||| ||||| |||| |||||  |||||||||||||||||||||||||||||||||||  |||| |||||||||| | |||||    
T  28918099 gattaggcgtgtcccagtgtcggacacgtgtcgtgtccacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctatgtcg 28918000  T
Q  128 acgtatcagtgtccgtgtcgtgtccg 153  Q
     ||| ||||| |||||||||||||||    
T  28917999 gcgtgtcagtttccgtgtcgtgtccg 28917974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 67 - 151
Target Start/End: Complemental strand, 14216951 - 14216867
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    |||||| ||||||||||||||||||||||||| ||| ||||| |||||||||| ||||||||||| |||||||||||||||||||    
T  14216951 cgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgtc 14216867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 67 - 151
Target Start/End: Complemental strand, 14223080 - 14222996
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    |||||| ||||||||||||||||||||||||| ||| ||||| |||||||||| ||||||||||| |||||||||||||||||||    
T  14223080 cgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgtc 14222996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 20503578 - 20503429
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| ||||||| || ||||||| |||| || ||||||||||  |||| ||||| |||||||||||||||||||||||||||||||| |  |||| |||    
T  20503578 agcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtcattttttcaaa 20503479  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcata 168  Q
    ||||| | ||||||| |      ||||| |||||||||||||||||||||||||||    
T  20503478 ttatttgttgtgtcggc------gtgtcagtgtcgtgtccgtatccgtgcttcata 20503429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 63 - 153
Target Start/End: Original strand, 8587017 - 8587107
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||||||||||||||||||||| ||||||||||  |||| |||||| ||||||||||| ||| |||||||||||||| ||||||    
T  8587017 tgtccgacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtccg 8587107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 66 - 153
Target Start/End: Original strand, 10335285 - 10335372
Alignment:
Q  66 ccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||||||||| ||||||| || |||||||| |||| |||||||||| ||||||| ||| |||||||||||||||||||||    
T  10335285 ccgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccg 10335372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 63 - 150
Target Start/End: Original strand, 16000012 - 16000099
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgt 150  Q
    ||||||||||||||||||||| |||||||||||||||| |  ||||||||||||||| ||||||| ||| |||||||| |||||||||    
T  16000012 tgtccgacaccgacacttgtagttacactgaattatgttatttttttaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgt 16000099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 168
Target Start/End: Original strand, 40993287 - 40993431
Alignment:
Q  19 gacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtga-catttttaaattatt 117  Q
    ||||||| || ||||||| |||| || ||||| ||||  |||| |||||||||||||||| | |||||||||||||||||||||   |||||||||||||    
T  40993287 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgattttttttaaattatt 40993386  T
Q  118 agatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcata 168  Q
    ||  |||||||       |||||||||||||||||||||||||||||||||    
T  40993387 agcggtgtcga------ggtgtccgtgtcgtgtccgtatccgtgcttcata 40993431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 168
Target Start/End: Complemental strand, 26508166 - 26508068
Alignment:
Q  70 caccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcata 168  Q
    |||||||||||||||||||||||||||||||||  |||| |||||||||| ||||||  ||| ||||| || || |||||||||||||||| |||||||    
T  26508166 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatctgtatcgtgtccgtatccgttcttcata 26508068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 168
Target Start/End: Original strand, 41961650 - 41961752
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtcc-gtatccgtgcttc 165  Q
    |||||||||||||||||||||||| |||| |||||| ||||| |||||||||| |||| || ||| |||||||| ||||||||||| || ||||||||||    
T  41961650 cgacaccgacacttgtaattacaccgaataatgtgatattttcaaattattagttgtgacggcgtgtcagtgtctgtgtcgtgtccggtgtccgtgcttc 41961749  T
Q  166 ata 168  Q
    |||    
T  41961750 ata 41961752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 14979224 - 14979139
Alignment:
Q  83 aattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcata 168  Q
    ||||||||||||||||||||  |||| |||||||||| ||||||| |||  || ||||| ||||||||||||||||||||||||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgccattgtccttgtcgtgtccgtatccgtgcttcata 14979139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 63 - 164
Target Start/End: Complemental strand, 25775572 - 25775468
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtga-catttttaaattattagatgtgtcgacgtatcagtgtcc-gtgt-cgtgtccgtatccg 159  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||| |||||| | ||| ||||||||| |||| |||||| || ||||    
T  25775572 tgtccgacaccgacacttgtaattacactgaattatgtgattattttcaaattattaaatgtgttggcgtgtcagtgtccagtgtccgtgtctgtctccg 25775473  T
Q  160 tgctt 164  Q
    |||||    
T  25775472 tgctt 25775468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 750618 - 750705
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatc-agtgtccgtgtcgtgtccg 153  Q
    |||||||||||||||||||| ||  ||||||||||| ||||| |||||||||| ||||||| ||| || |||||||||||||||||||    
T  750618 cgacaccgacacttgtaattgcagcgaattatgtgatattttcaaattattagttgtgtcgccgtgtcaagtgtccgtgtcgtgtccg 750705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 15796294 - 15796380
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||| |||||||||||||||||||| |||  |||| |||||||||  ||||||| ||| ||| |||||||||||||||||    
T  15796294 cgacaccgacaattgtaattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccg 15796380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 8383320 - 8383231
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtcc 152  Q
    |||||||||||||||||| ||||||||||||||||| |||  || | ||||||||||  |||||| ||| ||| ||||||||||||||||    
T  8383320 tgtccgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtcc 8383231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 143
Target Start/End: Complemental strand, 18427056 - 18426932
Alignment:
Q  19 gacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattatta 118  Q
    ||||||| ||||||||||||||| || ||| | ||||| |||| | |||||||||||||  | ||||||||| |||||||||||  |||| |||||||||    
T  18427056 gacactcctcagattaggtgtgtcccggtgccggacacgtgtcgtatccgacaccgacatatataattacaccgaattatgtgattttttgaaattatta 18426957  T
Q  119 gatgtgtcgacgtatcagtgtccgt 143  Q
    |  |||||| ||| || ||||||||    
T  18426956 gtggtgtcggcgtgtccgtgtccgt 18426932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 153
Target Start/End: Complemental strand, 23657846 - 23657713
Alignment:
Q  19 gacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgaca-tttttaaattatt 117  Q
    |||||| ||| |||||||||||| || || || |||| ||||| ||||||||||||| | || ||||||||||||||||| ||| | ||||||||||||     
T  23657846 gacacttttcggattaggtgtgtcccggtatcggacaaatgtcatgtccgacaccgatatttataattacactgaattatatgatattttttaaattat- 23657748  T
Q  118 agatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
       ||||||| | ||||||||||||| |||||||||    
T  23657747 -attgtgtcggcatatcagtgtccgtatcgtgtccg 23657713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 168
Target Start/End: Complemental strand, 34910376 - 34910280
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttca 166  Q
    |||||||||| |||||||||||||||||||||||||  |||| |||||||||| ||||||| ||| || |||||    | ||||||||||||||||||||    
T  34910376 cgacaccgactcttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtc-gtgtc----tggtgtccgtatccgtgcttca 34910282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 51206349 - 51206412
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtc 126  Q
    ||||||||||||||||||||| ||||||||||||||||||  |||| |||||||||| ||||||    
T  51206349 tgtccgacaccgacacttgtatttacactgaattatgtgattttttcaaattattagctgtgtc 51206412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 3164033 - 3164111
Alignment:
Q  75 acacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||||||  ||||||||||||||||||  |||| |||||||||| |||||||||||  || |||||||||||||||||    
T  3164033 acacttgttcttacactgaattatgtgattttttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtccg 3164111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 14829748 - 14829663
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||||||||||||||  ||||||||||||  |||| |||||||||| ||||||| ||| |||||||| ||||| ||||||    
T  14829748 cgacaccgacacttgtaattaccatgaattatgtga-tttttcaaattattagctgtgtcggcgtgtcagtgtctgtgtcatgtccg 14829663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 140
Target Start/End: Complemental strand, 21479178 - 21479104
Alignment:
Q  66 ccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtc 140  Q
    |||||||||||||| |||||||||||||||| |||||  |||| |||||||||| ||||||| ||| ||||||||    
T  21479178 ccgacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 21479104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 153
Target Start/End: Original strand, 35994735 - 35994823
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||||||| |||||||||||||||||||||||||||||  |||| |||||||||| ||||||| | | ||| ||||| |||||||||||    
T  35994735 tgtccgacac-gacacttgtaattacactgaattatgtga-tttttcaaattattagctgtgtcggcttgtcattgtccatgtcgtgtccg 35994823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 4987294 - 4987363
Alignment:
Q  70 caccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgt 139  Q
    |||| ||||||||||||||||||||||||||||  |||| |||||||||| ||||||| ||| |||||||    
T  4987294 caccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 4987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 63 - 148
Target Start/End: Original strand, 10268482 - 10268567
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgt 148  Q
    |||| ||||| |||||||||||||||||| ||||||||||  |||| |||||||||  ||||||| ||| ||||||||| ||||||    
T  10268482 tgtctgacactgacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccatgtcgt 10268567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 63 - 168
Target Start/End: Original strand, 32400704 - 32400808
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtcc-gtg-tcgtgtccgtatccgt 160  Q
    |||||||||| ||||||||||||||||   |||||||| |  |||| |||||||||| ||||||| ||| ||||||||| ||| |||||||||||||| |    
T  32400704 tgtccgacacggacacttgtaattaca---aattatgtaatcttttcaaattattagctgtgtcgccgtgtcagtgtccggtgttcgtgtccgtatccat 32400800  T
Q  161 gcttcata 168  Q
    ||||||||    
T  32400801 gcttcata 32400808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 14209172 - 14209112
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcg 127  Q
    |||||| |||||||||||||||||||||||||||||  |||| |||||||||| |||||||    
T  14209172 cgacactgacacttgtaattacactgaattatgtgattttttaaaattattagttgtgtcg 14209112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 168
Target Start/End: Complemental strand, 28812574 - 28812478
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttca 166  Q
    |||||||||||||||||| |||||||||||||||||  | || |||||||||| ||||||| ||| || ||||||||    |||| ||||||||||||||    
T  28812574 cgacaccgacacttgtaactacactgaattatgtgatttcttcaaattattagttgtgtcggcgtgtc-gtgtccgt----tgtctgtatccgtgcttca 28812480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 1509598 - 1509539
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtc 126  Q
    ||||||||||||||||||||||||| ||||||||||  |||| |||||||||| ||||||    
T  1509598 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 1509539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 153
Target Start/End: Complemental strand, 7171581 - 7171475
Alignment:
Q  46 gtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgt 145  Q
    ||||| ||||| |||| ||||||||||| |||||||||||||||| ||||||| |||  |||| ||||||  || ||||||| | | ||||| |||||||    
T  7171581 gtgtcggacacgtgtcgtgtccgacaccaacacttgtaattacaccgaattatatga-tttttcaaattacaagctgtgtcggcatgtcagtatccgtgt 7171483  T
Q  146 cgtgtccg 153  Q
    ||||||||    
T  7171482 cgtgtccg 7171475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 168
Target Start/End: Complemental strand, 9800099 - 9799995
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtcc---gtatccgtgct 163  Q
    ||||||||||||||  |||||||| ||||||||| |  || | ||||||||||| |||||| ||| ||||||| ||||||||||||   ||||||||| |    
T  9800099 cgacaccgacacttacaattacacggaattatgtaattttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgtcctttgtatccgtgtt 9800000  T
Q  164 tcata 168  Q
    |||||    
T  9799999 tcata 9799995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 153
Target Start/End: Complemental strand, 3610691 - 3610606
Alignment:
Q  68 gacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||| ||||||| ||||||||||||| |||||| |  ||||||||||||||  ||||| | ||| |||||||| ||||||||||||    
T  3610691 gacaacgacactggtaattacactgagttatgttatttttttaaattattaactgtgttggcgtgtcagtgtctgtgtcgtgtccg 3610606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 160
Target Start/End: Complemental strand, 14747621 - 14747526
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacattttt-aaattattagatgtgtcgacgtatcagtgtccgtgtc--gtgtccgtatccgt 160  Q
    |||||| ||| |||||||||||||| ||||||||||  ||||| |||||||||| ||||||| ||| ||||||| ||||||  ||||||||||||||    
T  14747621 cgacacggacccttgtaattacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtcagtgt-cgtgtccggtgtccgtatccgt 14747526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 153
Target Start/End: Complemental strand, 25093608 - 25093475
Alignment:
Q  20 acactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattag 119  Q
    ||||||||||||||||  ||| | ||||||| ||||  |||  |||||||||||||||| | ||||||||||||||| |||||  || | |||| ||||     
T  25093608 acactcttcagattagaagtgcttcagtgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattgtgtgattttctcaaatcattaa 25093509  T
Q  120 atgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
      |||||| ||| | |||||| ||||||||||||    
T  25093508 cagtgtcggcgtgttagtgtcagtgtcgtgtccg 25093475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 140
Target Start/End: Original strand, 34185123 - 34185196
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtc 140  Q
    |||||||||||||||||||||||||||||| |||||  |||| ||||||||||  |||||| ||| ||| ||||    
T  34185123 cgacaccgacacttgtaattacactgaattgtgtgattttttgaaattattagccgtgtcggcgtgtcactgtc 34185196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 35223051 - 35222962
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtga 102  Q
    ||||| ||||||| || ||| | | |||| || ||||||||||| |||| |||||||||||||||| | |||||||| ||||||||||||    
T  35223051 agcacggacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccgacaccgacacatataattacattgaattatgtga 35222962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 7928513 - 7928457
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattag 119  Q
    |||||||||||||||| | |||||||||||||||||||||  |||| ||||||||||    
T  7928513 tgtccgacaccgacacatataattacactgaattatgtgattttttcaaattattag 7928457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 66 - 146
Target Start/End: Original strand, 10318034 - 10318113
Alignment:
Q  66 ccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtc 146  Q
    ||||||||||||||| || ||||||| ||  ||||||| |||| |||||||||| ||||||| ||| ||||||||||||||    
T  10318034 ccgacaccgacacttatatttacactaaaa-atgtgactttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 10318113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 22774071 - 22774166
Alignment:
Q  68 gacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcat 167  Q
    ||||||||||||| ||||||||||||| |||||||| || |  |||||||||  |||||||||| || |||||      |||||||||||||||||||||    
T  22774071 gacaccgacacttataattacactgaaatatgtgactttgtctaattattagtggtgtcgacgtgtctgtgtc-----tgtgtccgtatccgtgcttcat 22774165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 27505305 - 27505245
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcg 127  Q
    ||||||||||||||||||||||||| ||||||||||  |||  |||||||||| |||||||    
T  27505305 cgacaccgacacttgtaattacacttaattatgtgatttttaaaaattattagctgtgtcg 27505245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 49651786 - 49651838
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattag 119  Q
    ||||||||||||||||||||||| ||||||||||||  |||| ||||||||||    
T  49651786 cgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattag 49651838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 102
Target Start/End: Complemental strand, 8593200 - 8593161
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtga 102  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  8593200 tgtccgacaccgacacttgtaattatactgaattatgtga 8593161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 21256990 - 21257045
Alignment:
Q  71 accgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtc 126  Q
    ||||||||||||||||| ||||||||||||||  |||| |||||||||| ||||||    
T  21256990 accgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtc 21257045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 146
Target Start/End: Original strand, 25948887 - 25948966
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtc 146  Q
    ||||||| |||||| |||||||||||||||||||||  |||| ||||||||||  || ||| | | ||||||||||||||    
T  25948887 cgacaccaacacttataattacactgaattatgtgattttttcaaattattagccgtatcggcatgtcagtgtccgtgtc 25948966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 3865748 - 3865698
Alignment:
Q  52 gacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtga 102  Q
    ||||| |||| |||| |||||||||||||||||||| ||||||||||||||    
T  3865748 gacacgtgtcgtgtcagacaccgacacttgtaattatactgaattatgtga 3865698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 153
Target Start/End: Original strand, 24205038 - 24205127
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||||||| ||||||| ||||||||||| ||||||| |  || | |||||||||   |||||| ||| |||||||||||||||||||||    
T  24205038 tgtccgacac-gacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccg 24205127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 11610573 - 11610528
Alignment:
Q  74 gacacttgtaattacactgaattatgtgacatttttaaattattag 119  Q
    ||||||||||| |||||||||||||||||  |||||||||||||||    
T  11610573 gacacttgtaactacactgaattatgtgatttttttaaattattag 11610528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 140
Target Start/End: Complemental strand, 39756295 - 39756222
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtc 140  Q
    ||||||||||||||||||||| | | ||||||||||  ||||||||||||||  | ||||| ||| ||||||||    
T  39756295 cgacaccgacacttgtaattatattaaattatgtgatttttttaaattattaattttgtcggcgtgtcagtgtc 39756222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 55213020 - 55212943
Alignment:
Q  69 acaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtc 146  Q
    |||||||||||||||||| |||| ||||||||||  |||| |||||||||  ||||||| | ||||| |||| |||||    
T  55213020 acaccgacacttgtaattgcactaaattatgtgattttttaaaattattaactgtgtcggcatatcactgtctgtgtc 55212943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 154
Target Start/End: Complemental strand, 38731278 - 38731190
Alignment:
Q  66 ccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgt 154  Q
    ||||||||||||| | ||| |||||||||||||||||  |||| ||||||||||  || ||||| | || |||| | ||||||||||||    
T  38731278 ccgacaccgacacatataactacactgaattatgtgattttttaaaattattagcggtatcgacatgtcggtgtacatgtcgtgtccgt 38731190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 2941637 - 2941582
Alignment:
Q  47 tgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtga 102  Q
    |||||||||| |||| |||||||||||||||| | ||||||||||| ||| |||||    
T  2941637 tgtcagacacgtgtcgtgtccgacaccgacacatataattacactgtattttgtga 2941582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 4990967 - 4991050
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgt 150  Q
    |||| ||||||||||||||||||||||||||||| |  || | ||| ||||||  ||||||  || ||||| ||||||||||||    
T  4990967 cgacgccgacacttgtaattacactgaattatgtaattttctcaaactattagcggtgtcggagtgtcagtctccgtgtcgtgt 4991050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 11252089 - 11251985
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||||||||||| || ||||||| |||||||  || | ||||| |||  |||| ||||||||||| |  ||||||||||||||||||||  || | |||    
T  11252089 agcacagacactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccgacacat--aattacactgaattatgtgattttctcaaa 11251992  T
Q  113 ttattag 119  Q
    |||||||    
T  11251991 ttattag 11251985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 118
Target Start/End: Complemental strand, 16789071 - 16789020
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattatta 118  Q
    ||||||| |||||| ||||||||||||||||| |||  ||||||||||||||    
T  16789071 cgacaccaacacttataattacactgaattatatgatttttttaaattatta 16789020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 169
Target Start/End: Original strand, 8789541 - 8789653
Alignment:
Q  58 tgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtc--gtgtccgta 155  Q
    |||| |||||||||||||||| | ||||||||| |||||||||||  || | ||||||| ||  ||||||  || || ||||  |||||  |||||||||    
T  8789541 tgtcgtgtccgacaccgacacatataattacacggaattatgtgattttctcaaattataagccgtgtcggtgtgtctgtgt-tgtgtccggtgtccgta 8789639  T
Q  156 tccgtgcttcatac 169  Q
    ||||||||||||||    
T  8789640 tccgtgcttcatac 8789653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 168
Target Start/End: Complemental strand, 40052367 - 40052296
Alignment:
Q  91 tgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcata 168  Q
    ||||||||||||  |||| |||||||||| ||||||| ||| ||||||||      ||||||||||||||||||||||    
T  40052367 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc------gtgtccgtatccgtgcttcata 40052296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 11493376 - 11493441
Alignment:
Q  82 taattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcg 147  Q
    |||||||||||||||||||||  || | | ||||||||  |||||||||| ||| |||||||||||    
T  11493376 taattacactgaattatgtgattttctcacattattagtggtgtcgacgtgtcaatgtccgtgtcg 11493441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 14832158 - 14832081
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtg 144  Q
    |||||| |||||||||||||||| ||| ||||||||  |||| |||||||||| ||| ||| ||| || || ||||||    
T  14832158 cgacactgacacttgtaattacattgagttatgtgattttttcaaattattagctgtatcggcgtgtccgtatccgtg 14832081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 13845504 - 13845560
Alignment:
Q  46 gtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtga 102  Q
    ||||||||||| | || |||||||||||||||| | ||||||||||| ||| |||||    
T  13845504 gtgtcagacacgtctcgtgtccgacaccgacacatataattacactgcattttgtga 13845560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 7e-43; HSPs: 73)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 34595247 - 34595091
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| ||||||| || |||||||||||| || ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||  |||| |||    
T  34595247 agcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaa 34595148  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtcgtgtcc-gtatccgtgcttcata 168  Q
    ||||||| ||||||| ||| ||| |||||||||||||||| || |||||||||||||    
T  34595147 ttattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgcttcata 34595091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 67 - 168
Target Start/End: Original strand, 10770674 - 10770775
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttca 166  Q
    ||||||||||||||||||||||||||||||||||||  |||| |||||||||| ||||| | ||| ||||||||| ||||||||||||||||||||||||    
T  10770674 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtccatgtcgtgtccgtatccgtgcttca 10770773  T
Q  167 ta 168  Q
    ||    
T  10770774 ta 10770775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 146
Target Start/End: Original strand, 17841535 - 17841668
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| ||||||| || ||||||| ||||  ||||||| |||||||||| |||||||||||| |||||||||||||||| ||||||||||  |||| |||    
T  17841535 agcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacaccgtcacttgtaattacactaaattatgtgattttttcaaa 17841634  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtc 146  Q
    ||||||| ||||||| ||| ||||||||||||||    
T  17841635 ttattagctgtgtcggcgtgtcagtgtccgtgtc 17841668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 167
Target Start/End: Complemental strand, 16833418 - 16833267
Alignment:
Q  16 acagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaatta 115  Q
    |||||||||| || |||| ||||||| |  ||||| ||| | |||| ||||  |||||||||||||||||||||||||| |||||||  |||| ||||||    
T  16833418 acagacactcctcggattcggtgtgtcctggtgtcggacgcgtgtcgtgtctaacaccgacacttgtaattacactgaagtatgtgattttttcaaatta 16833319  T
Q  116 ttagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcat 167  Q
    |||| ||||||| ||| |||||||| |||||||||||||||| |||||||||    
T  16833318 ttagttgtgtcggcgtgtcagtgtctgtgtcgtgtccgtatcagtgcttcat 16833267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 160
Target Start/End: Complemental strand, 12696442 - 12696290
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacacc-----gacacttgtaattacactgaattatgtgacattt 107  Q
    ||||||||||||| |  ||| |||||||| || ||||||||||| |||| ||||||||||      ||||||||||||||||||||||||||| |  |||    
T  12696442 agcacagacactccttggataaggtgtgtcccggtgtcagacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgtaattttt 12696343  T
Q  108 ttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgt 160  Q
    | |||||||||| ||||||| ||| |||||||||||||||||||||| |||||    
T  12696342 tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgtgtccgt 12696290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 67 - 151
Target Start/End: Original strand, 8365519 - 8365603
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    |||||||||||||||||||||||| ||||||||||| ||||| |||||||||| ||||||| ||| |||||||||||||||||||    
T  8365519 cgacaccgacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtc 8365603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 8776964 - 8777060
Alignment:
Q  58 tgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgt 154  Q
    |||| ||||||||||| |||||||||||||||||||||| |||||  |||| |||||||||| ||||||| ||| ||||||||||||||||||||||    
T  8776964 tgtcgtgtccgacaccaacacttgtaattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccgt 8777060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 16766756 - 16766670
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||||||||||||||||||||||||||||  |||| |||||||||| ||||||| ||| ||||||||| |||||||||||    
T  16766756 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccg 16766670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 146
Target Start/End: Complemental strand, 28152204 - 28152079
Alignment:
Q  20 acactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattag 119  Q
    |||||| || |||||||  ||| || ||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||    
T  28152204 acactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtga-tttttcaaattattag 28152106  T
Q  120 atgtgtcgacgtatcagtgtccgtgtc 146  Q
     | ||||| ||| ||||||||||||||    
T  28152105 ctttgtcggcgtgtcagtgtccgtgtc 28152079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 152
Target Start/End: Original strand, 7977783 - 7977915
Alignment:
Q  20 acactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattag 119  Q
    |||||| | |||||||| ||||| |  |||| |||| ||||  |||||||||||||||||||||||||||||||||||||| |  |||| ||||||||||    
T  7977783 acactccttagattaggcgtgtttcgttgtcggacatatgttgtgtccgacaccgacacttgtaattacactgaattatgtaattttttcaaattattag 7977882  T
Q  120 atgtgtcgacgtatcagtgtccgtgtcgtgtcc 152  Q
     ||||||| ||| ||||| ||| ||||||||||    
T  7977883 ctgtgtcggcgtgtcagtatccatgtcgtgtcc 7977915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 31 - 151
Target Start/End: Complemental strand, 9658974 - 9658854
Alignment:
Q  31 attaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacg 130  Q
    |||||| ||||||| ||||||||||| |||| ||||  |||||||||  | |||||||||||||||||||||  || ||||||||||||  |||||| ||    
T  9658974 attaggcgtgttccggtgtcagacacgtgtcgtgtctaacaccgacaaatataattacactgaattatgtgattttcttaaattattagcggtgtcggcg 9658875  T
Q  131 tatcagtgtccgtgtcgtgtc 151  Q
    | |||||||||||||||||||    
T  9658874 tgtcagtgtccgtgtcgtgtc 9658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 63 - 161
Target Start/End: Original strand, 426510 - 426609
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtcc-gtatccgtg 161  Q
    ||||||||||||||||||||||||||| | ||||||||||  |||| |||||||||  ||||||| ||| |||||||||||||||||||| |||||||||    
T  426510 tgtccgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtg 426609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 853839 - 853945
Alignment:
Q  47 tgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtc 146  Q
    |||| |||||||||| | |||||||||||||||||||||| |||| ||||||||||  |||| |||||||||| ||||||| ||| ||||  ||||||||    
T  853839 tgtcggacacatgtcgtatccgacaccgacacttgtaattgcacttaattatgtgattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtc 853938  T
Q  147 gtgtccg 153  Q
    |||||||    
T  853939 gtgtccg 853945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 9107370 - 9107456
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||||||||||||||||||||| |||||  |||| |||||||||| ||||||| ||| | |||||||||||||||||||    
T  9107370 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgtccg 9107456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 75 - 154
Target Start/End: Complemental strand, 17435250 - 17435171
Alignment:
Q  75 acacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgt 154  Q
    |||||||||||||||||||||||||| |  |||| |||||||||| | |||||||||||||||||||||||||| |||||    
T  17435250 acacttgtaattacactgaattatgtaattttttaaaattattagctatgtcgacgtatcagtgtccgtgtcgtatccgt 17435171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 150
Target Start/End: Complemental strand, 4878055 - 4877918
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacattttt-aa 111  Q
    ||||| ||||||| || ||||||| |||| || ||||| ||||  |||| ||||||||||||||||||||||||| ||| ||||||||||| ||||| ||    
T  4878055 agcacggacactcctcggattaggcgtgt-cctgtgtcggacatgtgtcgtgtccgacaccgacacttgtaattatacttaattatgtgacttttttcaa 4877957  T
Q  112 attattagatgtgtcgacgtatcagtgtccgtgtcgtgt 150  Q
    |||||||| |||||||  || ||| | ||||||||||||    
T  4877956 attattagctgtgtcggtgtgtcactatccgtgtcgtgt 4877918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 154
Target Start/End: Original strand, 33001235 - 33001376
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    |||||| ||||||||  ||||||| || || | ||||||||||| |||| |||||||||||||||| | |||||||| | ||||||||||  |||| |||    
T  33001235 agcacaaacactctttggattaggcgtatttcggtgtcagacacgtgtcgtgtccgacaccgacacatataattacatttaattatgtgattttttcaaa 33001334  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgt 154  Q
    |||||||  |||||| ||| ||| || |||||| ||||||||    
T  33001335 ttattagcagtgtcggcgtgtcattgaccgtgttgtgtccgt 33001376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 66 - 168
Target Start/End: Original strand, 7801155 - 7801259
Alignment:
Q  66 ccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtg-tccgtgt-cgtgtccgtatccgtgct 163  Q
    ||||||||||||||||||||||| |||||||||||||  |||| |||||||||| ||||||| ||| | |||| || || | ||||||||||||||||||    
T  7801155 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgttcggtatccgtgtccgtatccgtgct 7801254  T
Q  164 tcata 168  Q
    |||||    
T  7801255 tcata 7801259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 23771685 - 23771554
Alignment:
Q  19 gacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattatta 118  Q
    |||||||||||| ||||  ||||  | ||||| |||||||||| ||||||||||||||| |||||||||||||||| ||| | |  ||||||||||||||    
T  23771685 gacactcttcaggttagacgtgtctctgtgtcggacacatgtcgtgtccgacaccgacatttgtaattacactgaagtatat-aattttttaaattatta 23771587  T
Q  119 gatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
      ||||||| ||| || ||||||||||| ||||    
T  23771586 actgtgtcggcgtgtccgtgtccgtgtcatgtc 23771554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 24645594 - 24645466
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacattttt-aa 111  Q
    |||||||||||||||| ||||||  ||||    ||||| ||||| |||| |||| ||||||||||||||||| || ||||||||||||||  ||||| ||    
T  24645594 agcacagacactcttcggattagacgtgtcttggtgtcggacacgtgtcgtgtctgacaccgacacttgtaactatactgaattatgtgatttttttcaa 24645495  T
Q  112 attattagatgtgtcgacgtatcagtgtc 140  Q
    |||||||| ||||||||| | ||||||||    
T  24645494 attattagctgtgtcgacatgtcagtgtc 24645466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 32511612 - 32511767
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| ||||||| || ||||||| ||| |||  ||||||||| ||||| | ||||||||| |||||| |||||||||||||||||||||  || |||||    
T  32511612 agcacggacactcctccgattaggcgtgctccgatgtcagacatatgtcgtatccgacaccaacacttataattacactgaattatgtgattttcttaaa 32511711  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcata 168  Q
    |||||||  |||||   |   || |||| ||||| |||| ||||||||||||||||    
T  32511712 ttattagcggtgtcagaggggcaatgtctgtgtcatgtcggtatccgtgcttcata 32511767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 63 - 153
Target Start/End: Complemental strand, 7938179 - 7938089
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||| ||||||||||||| |||||||||| |||||| |||  |||| |||||||||| ||||||| ||| ||||||||| |||||||||||    
T  7938179 tgtcggacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccg 7938089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 168
Target Start/End: Complemental strand, 7027301 - 7027197
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacattttt-aaattattagatgtgtcgacgtatcagtgtccg-tgt-cgtgtccgtatccgtgct 163  Q
    |||||||||||| | |||||||||||||||||||||  ||||| ||||||| ||  |||||| ||||| |||||||| ||| ||||||||||||||||||    
T  7027301 cgacaccgacacatataattacactgaattatgtgatttttttcaaattatcaggggtgtcggcgtattagtgtccgatgtccgtgtccgtatccgtgct 7027202  T
Q  164 tcata 168  Q
    |||||    
T  7027201 tcata 7027197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 28715390 - 28715302
Alignment:
Q  31 attaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattag 119  Q
    |||||| |||| || |||||  |||| |||| |||||||||||||||||||||||||||||||||||||| |  |||| ||||||||||    
T  28715390 attaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattag 28715302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 72 - 160
Target Start/End: Complemental strand, 31959213 - 31959125
Alignment:
Q  72 ccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgt 160  Q
    ||||||||||||||||||||| |||||||||  |||| |||||||||| |||| || ||| ||||||| |||||| ||||||| |||||    
T  31959213 ccgacacttgtaattacactgcattatgtgattttttcaaattattagctgtgacggcgtgtcagtgttcgtgtcatgtccgtgtccgt 31959125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 3398677 - 3398595
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgt 150  Q
    ||||||||| |||| ||||||||||||||||| |||  |||| |||||||||| ||||||| ||| ||||||||||||||||||    
T  3398677 cgacaccgatacttataattacactgaattatatgat-ttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 3398595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 63 - 154
Target Start/End: Original strand, 6898277 - 6898368
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgt 154  Q
    ||||||||||||||||||||||||||||| |||||||| |  | || ||||||||||| |||||  ||| ||||||||| | ||||||||||    
T  6898277 tgtccgacaccgacacttgtaattacacttaattatgtaatttgttcaaattattagacgtgtcagcgtgtcagtgtccatatcgtgtccgt 6898368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 120
Target Start/End: Complemental strand, 9522948 - 9522897
Alignment:
Q  69 acaccgacacttgtaattacactgaattatgtgacatttttaaattattaga 120  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  9522948 acaccgacacttgtaattacactgaattatgtgatttttttaaattattaga 9522897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 151
Target Start/End: Original strand, 15489733 - 15489816
Alignment:
Q  68 gacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    |||||||||||||||||||||| |||||| ||| |  |||| |||||||||| ||||||||||| | ||||||||||| |||||    
T  15489733 gacaccgacacttgtaattacattgaattgtgtaattttttcaaattattagttgtgtcgacgtgttagtgtccgtgttgtgtc 15489816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 153
Target Start/End: Complemental strand, 3209442 - 3209355
Alignment:
Q  66 ccgacaccgacacttgtaattacactgaattatgtgacattttt-aaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||||||||||| ||||| ||||||||||  ||||| |||||||||| ||||||| ||| || |||| |||||||||||||    
T  3209442 ccgacaccgacacttgtaataacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtctgtgt-cgtgtcgtgtccg 3209355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 9911528 - 9911587
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacat-ttttaaattattagatgtgt 125  Q
    ||||||||||||||||||||||||||||||||||||  | |||||||||||||| |||||    
T  9911528 cgacaccgacacttgtaattacactgaattatgtgatttcttttaaattattagctgtgt 9911587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 166
Target Start/End: Complemental strand, 13789233 - 13789114
Alignment:
Q  47 tgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtc 146  Q
    |||||||||| |||| |||||||||  || || | ||||||||||| ||| | |||  ||||||||   |||| ||||||||||| ||  ||||||||||    
T  13789233 tgtcagacacgtgtcatgtccgacattgatacatataattacactgcattttatgatttttttaaaaatttagctgtgtcgacgtgtcgatgtccgtgtc 13789134  T
Q  147 gtgtccgtatccgtgcttca 166  Q
    |||||||||| |||||||||    
T  13789133 gtgtccgtattcgtgcttca 13789114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 166
Target Start/End: Complemental strand, 13797852 - 13797733
Alignment:
Q  47 tgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtc 146  Q
    |||||||||| |||| |||||||||  || || | ||||||||||| ||| | |||  ||||||||   |||| ||||||||||| ||  ||||||||||    
T  13797852 tgtcagacacgtgtcatgtccgacattgatacatataattacactgcattttatgatttttttaaaaatttagctgtgtcgacgtgtcgatgtccgtgtc 13797753  T
Q  147 gtgtccgtatccgtgcttca 166  Q
    |||||||||| |||||||||    
T  13797752 gtgtccgtattcgtgcttca 13797733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 127
Target Start/End: Original strand, 32978845 - 32978960
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacattttt-aa 111  Q
    ||||| ||||||| |  ||||||  |||| || ||||| ||||  |||| ||||||||||||||||||||||||||||| |||||||||   ||||| ||    
T  32978845 agcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacacttaattatgtgttttttttcaa 32978944  T
Q  112 attattagatgtgtcg 127  Q
    |||||||| |||||||    
T  32978945 attattagctgtgtcg 32978960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 79 - 145
Target Start/End: Complemental strand, 2224273 - 2224207
Alignment:
Q  79 ttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgt 145  Q
    |||||||||||||||||||| |||  ||||||||||||||| || |||||| ||||||| |||||||    
T  2224273 ttgtaattacactgaattatatgatttttttaaattattagctgcgtcgacatatcagtatccgtgt 2224207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 9027237 - 9027151
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||| | ||||||||| |||||||||||   | | ||||||||||  |||||| ||| |||||||||||||||||||||    
T  9027237 cgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccg 9027151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 127
Target Start/End: Original strand, 1191679 - 1191760
Alignment:
Q  46 gtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcg 127  Q
    ||||| |||||  ||| ||||| ||| |||||||||||||||||||||||| |||||  |||| |||||||||| |||||||    
T  1191679 gtgtcggacacgcgtcgtgtccaacatcgacacttgtaattacactgaattttgtgaatttttcaaattattagctgtgtcg 1191760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 1681811 - 1681734
Alignment:
Q  73 cgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgt 150  Q
    ||||||||||||||||||||||||| ||||  |||| |||||||||| ||||||| ||| | |||||  |||||||||    
T  1681811 cgacacttgtaattacactgaattacgtgattttttcaaattattagttgtgtcggcgtgttagtgtatgtgtcgtgt 1681734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 1700415 - 1700362
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattat 116  Q
    |||||||||||||||||| ||||||||||||| |||||||  ||||||||||||    
T  1700415 tgtccgacaccgacacttataattacactgaaatatgtgatttttttaaattat 1700362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 140
Target Start/End: Original strand, 5970108 - 5970181
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtc 140  Q
    ||||||| ||| ||||||||||||||||||||||||  |||| |||||||||  ||||||||||| || |||||    
T  5970108 cgacacccacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcgacgtgtccgtgtc 5970181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 19044522 - 19044442
Alignment:
Q  68 gacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgt 148  Q
    ||||||||||| | |||| |||||||||||||||| ||| | ||||||||||  |||||| ||| ||||||||| ||||||    
T  19044522 gacaccgacacatataataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgtccatgtcgt 19044442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 31384979 - 31384927
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattag 119  Q
    |||||| |||||||||||||||||||||||||||||  |||| ||||||||||    
T  31384979 cgacactgacacttgtaattacactgaattatgtgattttttcaaattattag 31384927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 403860 - 403915
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattatta 118  Q
    ||||||||||||||||||||| ||||||| ||||||||||  |||| |||||||||    
T  403860 tgtccgacaccgacacttgtagttacactaaattatgtgattttttcaaattatta 403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 168
Target Start/End: Complemental strand, 2117129 - 2117035
Alignment:
Q  73 cgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcata 168  Q
    |||||||| ||||| || ||||||||||||  |||| ||||||||||| ||||||  || || || | |||||||||||||| |||||||||||||    
T  2117129 cgacacttataattgcattgaattatgtgattttttcaaattattagaggtgtcggagtgtccgtat-cgtgtcgtgtccgtctccgtgcttcata 2117035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 142
Target Start/End: Original strand, 7265589 - 7265668
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccg 142  Q
    |||||||||||||||| | |||||||||||||||||||||  || | ||||||||||  |||| | ||| ||||||||||    
T  7265589 tgtccgacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccg 7265668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 13360319 - 13360457
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| |||||||||| ||||||| ||||  ||||||| ||||  |||  |||| |||||||| || | |||||||||||||||||||||  || | |||    
T  13360319 agcacggacactcttcggattaggcgtgtctcagtgtcggacat-tgttgtgtctgacaccgaaacatataattacactgaattatgtgattttctcaaa 13360417  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtcgtgtcc 152  Q
    ||| |||  |||||||||| || |||| ||| ||||||||    
T  13360418 ttactagtggtgtcgacgtgtctgtgttcgtatcgtgtcc 13360457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 150
Target Start/End: Complemental strand, 13851799 - 13851712
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgt 150  Q
    |||| |||| |||||| | |||||||||||||||| || |  || | ||||||||||  |||||||||| ||||||||||||||||||    
T  13851799 tgtcagacatcgacacatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgt 13851712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 98
Target Start/End: Original strand, 16388213 - 16388248
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattat 98  Q
    ||||||||||||||||||||||||||||||||||||    
T  16388213 tgtccgacaccgacacttgtaattacactgaattat 16388248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 5732506 - 5732595
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtcc 152  Q
    |||||||||||||||| | |||||||||| || |||||||  || | |||||||||   |||||| ||| ||||||||| ||||||||||    
T  5732506 tgtccgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtccatgtcgtgtcc 5732595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 7378092 - 7378003
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtga 102  Q
    ||||| ||||||  |||||||||  |||| || ||||| ||  |||||| |||||||||||||||| | |||||||| ||||||||||||    
T  7378092 agcacggacacttctcagattagccgtgtcccggtgtcggatgcatgtcgtgtccgacaccgacacatataattacattgaattatgtga 7378003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 8714039 - 8713974
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacattttt-aaattattagatgtgtcgacgt 131  Q
    ||||||| ||| ||||||||||||||||||||||||  ||||| |||||||||  |||||||||||    
T  8714039 cgacacccacatttgtaattacactgaattatgtgatttttttcaaattattaactgtgtcgacgt 8713974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 10294231 - 10294166
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacac 78  Q
    ||||||||||||| ||||||||| ||||| | ||| || |||||||||| ||||||||||| ||||    
T  10294231 agcacagacactcctcagattagctgtgtcctagtttcggacacatgtcgtgtccgacaccaacac 10294166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 146
Target Start/End: Complemental strand, 17302609 - 17302536
Alignment:
Q  74 gacacttgtaattacactgaattatgtgacattttt-aaattattagatgtgtcgacgtatcagtgtccgtgtc 146  Q
    |||||||||||||||| ||||||||||||  ||||| |||||||||| ||||||  ||| ||||||| ||||||    
T  17302609 gacacttgtaattacattgaattatgtgatttttttcaaattattagttgtgtcagcgtgtcagtgttcgtgtc 17302536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 26402676 - 26402713
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgt 100  Q
    |||||||||||||||||||| |||||||||||||||||    
T  26402676 tgtccgacaccgacacttgtgattacactgaattatgt 26402713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 168
Target Start/End: Original strand, 32298560 - 32298709
Alignment:
Q  20 acactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattag 119  Q
    |||||| ||| |||||| ||||||  ||||  |||| ||||| |||| |||||| |||| | |||||||||| ||||||||||   | ||||||||||||    
T  32298560 acactcatcaaattaggcgtgttctggtgttggacatatgtcatgtctgacaccaacacatataattacactaaattatgtgatgatcttaaattattag 32298659  T
Q  120 atgtgtcgacgtatcagtgtccgtgtc-gtgtccgtatccgtgcttcata 168  Q
      |||| | | | ||||| ||| |||| | ||||||||||||||||||||    
T  32298660 cggtgttggcatgtcagtatccatgtctgcgtccgtatccgtgcttcata 32298709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 7930364 - 7930288
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgt 143  Q
    ||||||||||||||| |||| |||| ||||||||||  |||| |||||||||  ||||||| | | |||||||||||    
T  7930364 cgacaccgacacttgaaatttcactaaattatgtgattttttcaaattattaattgtgtcggcatgtcagtgtccgt 7930288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 21924931 - 21924987
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattag 119  Q
    |||||||||||||||| | ||||||||||||||||| ||| ||| | ||||||||||    
T  21924931 tgtccgacaccgacacatataattacactgaattatttgatattctcaaattattag 21924987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 58 - 168
Target Start/End: Original strand, 5626687 - 5626797
Alignment:
Q  58 tgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgt-cgtgtccgtat 156  Q
    |||| |||||||||||||||| | || |||||||||| || ||||  || | |||  ||||| ||||||| ||| ||||||| ||||| |||||||||||    
T  5626687 tgtcgtgtccgacaccgacacatatatttacactgaactaagtgattttctaaaaaaattagttgtgtcggcgtgtcagtgt-cgtgtccgtgtccgtat 5626785  T
Q  157 ccgtgcttcata 168  Q
    ||||||| ||||    
T  5626786 ccgtgctgcata 5626797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 149
Target Start/End: Original strand, 17341671 - 17341746
Alignment:
Q  74 gacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtg 149  Q
    ||||||| |||||||||||||||||||||  || | |||||||||   |||||| ||| |||||| ||||||||||    
T  17341671 gacacttataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtcagtgcccgtgtcgtg 17341746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 58 - 137
Target Start/End: Complemental strand, 19040420 - 19040341
Alignment:
Q  58 tgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagt 137  Q
    |||| |||||||||| ||||| | |||||||||||||||||||||  || | ||||||||||  |||||| ||| |||||    
T  19040420 tgtcgtgtccgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 19040341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 143
Target Start/End: Original strand, 27904032 - 27904114
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtg--acatttttaaattattagatgtgtcgacgtatcagtgtccgt 143  Q
    |||| |||||||||| |||||||||||||||||||||||     ||||||||||||||| | ||||| ||| ||| |||||||    
T  27904032 tgtctgacaccgacatttgtaattacactgaattatgtgttttttttttaaattattagctatgtcggcgtgtcaatgtccgt 27904114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 152
Target Start/End: Complemental strand, 9629443 - 9629357
Alignment:
Q  66 ccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtcc 152  Q
    ||||||||||||| | |||||||| ||||||||||||  || | |||||||| |  |||||| ||| ||| | ||||||||||||||    
T  9629443 ccgacaccgacacatataattacattgaattatgtgattttctcaaattattggcggtgtcggcgtgtcaatatccgtgtcgtgtcc 9629357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 17327596 - 17327750
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacacc-----gacacttgtaattacactgaattatgtgacattt 107  Q
    ||||| ||||||| || ||||||| |||| || ||||||||||| |||| ||||||||||      ||||| | || ||||||| ||||||||||  ||     
T  17327596 agcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacacgacactgacacatatagttacactaaattatgtgattttc 17327695  T
Q  108 ttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtcc-gtatccgtg 161  Q
    | ||| | |||| ||||||| ||||||| ||||  |||||||||| |||||||||    
T  17327696 tcaaaatcttagttgtgtcggcgtatcactgtctatgtcgtgtccggtatccgtg 17327750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 168
Target Start/End: Original strand, 34073347 - 34073449
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtcc-gtatccgtgcttc 165  Q
    |||||||||| | | |||||||||||||||||| ||  || | ||||||||||   ||| | | | |||||||||||||||||||| || ||||||||||    
T  34073347 cgacaccgacccatataattacactgaattatgagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtccagtgtccgtgcttc 34073446  T
Q  166 ata 168  Q
    |||    
T  34073447 ata 34073449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 1316026 - 1315969
Alignment:
Q  32 ttaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattaca 89  Q
    ||||| ||||||  ||||| |||||||| | || ||||||||||||||||||||||||    
T  1316026 ttaggcgtgttctggtgtcggacacatgacgtgcccgacaccgacacttgtaattaca 1315969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 6751878 - 6751915
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgt 100  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  6751878 tgtccgacaccgacacttgtgattacattgaattatgt 6751915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 10339060 - 10339125
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacac 78  Q
    ||||| ||||||| || ||||||| |||| |||||||| ||||  |||| ||||||||||||||||    
T  10339060 agcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacac 10339125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 100
Target Start/End: Original strand, 21395308 - 21395341
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgt 100  Q
    ||||||||||||||||||||||||| ||||||||    
T  21395308 cgacaccgacacttgtaattacactaaattatgt 21395341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 25010179 - 25010262
Alignment:
Q  47 tgtcagacacatgtcttgtccgacaccgaca---cttgtaattacactgaattatgtgacatttttaaattattagatgtgtcg 127  Q
    |||| ||||||||||||||  |||||| |||   |||||||| || |||||||||||||  |||| |||||||||| |||||||    
T  25010179 tgtcggacacatgtcttgtttgacaccaacagtacttgtaataacgctgaattatgtgattttttcaaattattagctgtgtcg 25010262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 115
Target Start/End: Complemental strand, 7973713 - 7973665
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaatta 115  Q
    |||||||||||||| |||||||||| |||||||| |  |||||||||||    
T  7973713 cgacaccgacacttataattacacttaattatgtaatttttttaaatta 7973665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 9025494 - 9025546
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattag 119  Q
    |||||||||||| | |||||||||||||||||||||  || | ||||||||||    
T  9025494 cgacaccgacacatataattacactgaattatgtgattttctcaaattattag 9025546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 146
Target Start/End: Original strand, 16388248 - 16388311
Alignment:
Q  82 taattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtc 146  Q
    |||||||||||||||||||||  |||| |||||||| | | | ||||||| ||||||||||||||    
T  16388248 taattacactgaattatgtgattttttcaaattatttgct-tatcgacgtgtcagtgtccgtgtc 16388311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 31429004 - 31429056
Alignment:
Q  68 gacaccgacacttgtaattacactgaattatgtga-catttttaaattattag 119  Q
    |||||| ||| ||||||||||||||||||||||||   |||||||||||||||    
T  31429004 gacacctacatttgtaattacactgaattatgtgattttttttaaattattag 31429056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 3e-39; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 21576691 - 21576848
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| ||||||| || ||||||| |||| |||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||  |||| |||    
T  21576691 agcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacacttgtaattacactgaattatgtgattttttcaaa 21576790  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtc--gtgtccgtatccgtgcttcata 168  Q
    ||||||| ||||| | ||||||||||| ||||||  ||||| ||||||||||||||||    
T  21576791 ttattagctgtgttggcgtatcagtgttcgtgtccagtgtctgtatccgtgcttcata 21576848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 21191002 - 21191142
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| ||||||| || ||||||| |||| || | ||| ||||| |||  ||||||||||||||||||||||||||||||||||||||||  |||| |||    
T  21191002 agcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaa 21191101  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||||| ||||||| | | |||||||||||||||||||||    
T  21191102 ttattagctgtgtcggcatgtcagtgtccgtgtcgtgtccg 21191142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 153
Target Start/End: Complemental strand, 6247685 - 6247595
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||| ||| ||||||| ||| |||||||||    
T  6247685 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgtgcgtatcgtgtccg 6247595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 4105372 - 4105214
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacattttt--a 110  Q
    ||||| ||||||| || ||||||| |||| ||||| |||||||||| ||  ||| || ||| ||||||||||||||||||||||||||||  |||||  |    
T  4105372 agcacggacactcctcggattaggcgtgtcccagtatcagacacatatcgagtctgatacctacacttgtaattacactgaattatgtgatcttttttca 4105273  T
Q  111 aattattagatgtgtcgacgtatcagtgtccgtgtcgtgtcc-gtatccgtgcttcata 168  Q
    ||||||||| | ||||| ||| ||||| |||||||| ||||| ||||||||||||||||    
T  4105272 aattattagttatgtcggcgtgtcagtatccgtgtcatgtccggtatccgtgcttcata 4105214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 13287399 - 13287485
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||||||||| ||||||||||||||||||  |||| |||||||||  ||||||||||| | |||||||||||||||||||    
T  13287399 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtccg 13287485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 168
Target Start/End: Complemental strand, 14422965 - 14422862
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgc 162  Q
    ||||||||| ||| |||| |||||||||||||||||||||  ||||||||||||||| ||| |||  || ||||||||| ||||||||||||||| ||||    
T  14422965 tgtccgacatcgaaacttataattacactgaattatgtga--tttttaaattattagctgtatcggtgtgtcagtgtccttgtcgtgtccgtatctgtgc 14422868  T
Q  163 ttcata 168  Q
    ||||||    
T  14422867 ttcata 14422862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 21522809 - 21522723
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||| |||||||||||||||||||||| |  |||| |||||||||| ||||||| ||| |||||||||||||||||||||    
T  21522809 cgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 21522723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 21533375 - 21533289
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||| |||||||||||||||||||||| |  |||| |||||||||| ||||||| ||| |||||||||||||||||||||    
T  21533375 cgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 21533289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 33178088 - 33178014
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagt 137  Q
    ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||| ||||||| ||| |||||    
T  33178088 tgtccgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgtcagt 33178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 64 - 166
Target Start/End: Complemental strand, 8420089 - 8419985
Alignment:
Q  64 gtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtcc-gtgt-cgtgtccgtatccgtg 161  Q
    |||||||||||||||||||||||||| |||||||||| |  |||| |||||||||| | ||||| ||| ||| ||||| |||| ||||||||||||||||    
T  8420089 gtccgacaccgacacttgtaattacattgaattatgttattttttcaaattattagctatgtcggcgtgtcattgtccggtgtccgtgtccgtatccgtg 8419990  T
Q  162 cttca 166  Q
    |||||    
T  8419989 cttca 8419985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 151
Target Start/End: Complemental strand, 21542089 - 21542005
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    |||||||||||||||||||||||||||||||||| |  ||||||||||||||| ||||||| | | ||| |||| ||||||||||    
T  21542089 cgacaccgacacttgtaattacactgaattatgttatctttttaaattattagttgtgtcggcatgtcaatgtctgtgtcgtgtc 21542005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 24906292 - 24906387
Alignment:
Q  58 tgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||| ||||||| |||||||||||||||||||||||||||||| |  |||| |||||||||  ||||| | ||| ||||||| |||||||||||||    
T  24906292 tgtcatgtccgataccgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgttcgtgtcgtgtccg 24906387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 72 - 146
Target Start/End: Complemental strand, 14674323 - 14674249
Alignment:
Q  72 ccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtc 146  Q
    |||||||||||||||||||| ||||||||||  |||| |||||||||| ||||||| ||| ||||||||||||||    
T  14674323 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 14674249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 66 - 153
Target Start/End: Complemental strand, 15382539 - 15382450
Alignment:
Q  66 ccgacaccgacacttgtaattacactgaattatgtgacattttt--aaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||||||||||||| |||||||||| |||  |||||  |||||||||| ||||||| ||| ||| |||||||||||||||||    
T  15382539 ccgacaccgacacttgtaattatactgaattatatgattttttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccg 15382450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 19579760 - 19579682
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgt 145  Q
    |||||||||||||||||||| |||| ||||||||||  || | |||||||||| ||||||| |||||||||||||||||    
T  19579760 cgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccgtgt 19579682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 31084435 - 31084309
Alignment:
Q  19 gacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacac-----cgacacttgtaattacactgaattatgtgacatttttaaat 113  Q
    ||||||| || |||||||  ||| |||||||| ||||| |||| ||||||||||     ||||||||||||||||| ||||||||||||  |||| ||||    
T  31084435 gacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtccgacacgacatcgacacttgtaattacattgaattatgtgattttttcaaat 31084336  T
Q  114 tattagatgtgtcgacgtatcagtgtc 140  Q
    |||||| ||||||| ||| ||||||||    
T  31084335 tattagctgtgtcggcgtgtcagtgtc 31084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 43564994 - 43564863
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| ||||||  || ||||||| |||| || | ||| |||||||||| |||||||||||||||||| |||||||||| ||||||||||  |||  |||    
T  43564994 agcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttataattacactaaattatgtgatttttccaaa 43564895  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtc 146  Q
    ||||  ||||||||| ||| ||||||| ||||||    
T  43564894 ttat--gatgtgtcggcgtgtcagtgttcgtgtc 43564863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 141
Target Start/End: Original strand, 21351906 - 21351979
Alignment:
Q  68 gacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtcc 141  Q
    |||||||||||||||||||||||||||||||||||| ||||  ||||||||| |||||||  || |||||||||    
T  21351906 gacaccgacacttgtaattacactgaattatgtgactttttccaattattagttgtgtcggtgtgtcagtgtcc 21351979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 168
Target Start/End: Complemental strand, 41633794 - 41633693
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttca 166  Q
    ||||||||||| |||||||||||||||||||||| |  |||| |||||||||| |||||||  || ||||| || |||| |||||||||| |||| ||||    
T  41633794 cgacaccgacatttgtaattacactgaattatgtaaatttttcaaattattagctgtgtcggagtgtcagtatctgtgtggtgtccgtattcgtgtttca 41633695  T
Q  167 ta 168  Q
    ||    
T  41633694 ta 41633693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 39698600 - 39698524
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgt 143  Q
    |||||| |||||||||||||||||||||||||||||  |||| |||||||||| ||||||  ||| |||||||||||    
T  39698600 cgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgtccgt 39698524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 42893467 - 42893359
Alignment:
Q  19 gacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattatta 118  Q
    ||||||| ||| |||||| |||| |  ||||| ||||| |||  |||| ||||||||||||||||||||||||| |||||||||  |||| |||||||||    
T  42893467 gacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgacacttgtaattacactggattatgtgattttttcaaattatta 42893368  T
Q  119 gatgtgtcg 127  Q
    | |||||||    
T  42893367 gctgtgtcg 42893359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 10298628 - 10298553
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccg 142  Q
    ||||||||||||||||||||||| || |||||||||| |||| |||||||||| ||||||| ||| | ||||||||    
T  10298628 cgacaccgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggcgtgttagtgtccg 10298553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 37328844 - 37328927
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgt 150  Q
    |||||||||||| ||||||||||||||||| |||||  |||  |||||||| | |||||||  |||||||||||||||||||||    
T  37328844 cgacaccgacacatgtaattacactgaattttgtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgtgtcgtgt 37328927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 127
Target Start/End: Complemental strand, 15884056 - 15883986
Alignment:
Q  58 tgtcttgtccgacaccgacacttgtaattacactgaattatgtga-catttttaaattattagatgtgtcg 127  Q
    |||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||||| | |||||||    
T  15884056 tgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttttaaattatttgctgtgtcg 15883986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 168
Target Start/End: Complemental strand, 43001856 - 43001763
Alignment:
Q  70 caccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcata 168  Q
    |||| |||||||||||||||||||||||||| |  |||| ||||||||||  |||||||| | ||||||||||     |||||||||||||||||||||    
T  43001856 caccaacacttgtaattacactgaattatgtaattttttcaaattattagcagtgtcgacatgtcagtgtccg-----tgtccgtatccgtgcttcata 43001763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 168
Target Start/End: Original strand, 28588626 - 28588774
Alignment:
Q  19 gacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattatta 118  Q
    |||||||||| ||||| | |||| |  |||||||| |  |||| |||||||||||||||| | |||||||||||||||||||||  || | |||||||||    
T  28588626 gacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgacacctataattacactgaattatgtgattttctcaaattatta 28588725  T
Q  119 gatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcata 168  Q
       |||||| ||| ||| |||   |||||||||||||| |||||||||||    
T  28588726 ccggtgtcggcgtgtcaatgt-tatgtcgtgtccgtattcgtgcttcata 28588774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 160
Target Start/End: Complemental strand, 30135372 - 30135279
Alignment:
Q  68 gacaccgacacttgtaattacactgaattatgtgacattttt-aaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgt 160  Q
    |||||||||||||||||||||| ||| ||||||||  ||||| |||||||||| ||||||| ||| || || || ||||||||||||| |||||    
T  30135372 gacaccgacacttgtaattacaatgagttatgtgatttttttcaaattattagttgtgtcggcgtgtcggtatctgtgtcgtgtccgtgtccgt 30135279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 67 - 140
Target Start/End: Complemental strand, 30183608 - 30183535
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtc 140  Q
    ||||||||||||||||||||| || |||| |||||| ||||| |||||||||| ||||||| | ||||||||||    
T  30183608 cgacaccgacacttgtaattaaaccgaataatgtgatattttcaaattattagttgtgtcggcatatcagtgtc 30183535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 153
Target Start/End: Original strand, 36642763 - 36642848
Alignment:
Q  68 gacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||||| || ||||||| || ||||| || |||| |||||||||  ||||||| ||| |||||||||||||||||||||    
T  36642763 gacaccgacacttatatttacactaaaatatgtcactttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccg 36642848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 131
Target Start/End: Original strand, 7218271 - 7218331
Alignment:
Q  71 accgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgt 131  Q
    ||||||||||||||||||||||||||||||||  | ||||||||||||| | |||||||||    
T  7218271 accgacacttgtaattacactgaattatgtgatttatttaaattattagctctgtcgacgt 7218331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 161
Target Start/End: Original strand, 6326293 - 6326392
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtcc-gtatccgtg 161  Q
    |||||||| | ||||||||||||||||||||||||||| |  || | |||||| |||   ||||| ||| |||||||||||||||||||| |||||||||    
T  6326293 tgtccgacgctgacacttgtaattacactgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtg 6326392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 148
Target Start/End: Original strand, 17177025 - 17177104
Alignment:
Q  69 acaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgt 148  Q
    ||||||||||||||||||||| |||||| | |||  |||| |||||||||| ||||| | |||||||||||||| |||||    
T  17177025 acaccgacacttgtaattacaatgaattttttgattttttcaaattattagctgtgttggcgtatcagtgtccgagtcgt 17177104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 26312882 - 26312743
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    |||||| |||||| || |||||||||||| |  ||||||||||| | || ||||||||||||| || | ||||||||||||||||  |||  || | |||    
T  26312882 agcacatacactcctcggattaggtgtgtcctggtgtcagacacgtatcgtgtccgacaccgatacatataattacactgaattaattgattttctcaaa 26312783  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtcgtgtcc 152  Q
    ||||| |  || ||| | ||||||||||| ||||||||||    
T  26312782 ttatttgcggtatcggcatatcagtgtccatgtcgtgtcc 26312743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 167
Target Start/End: Complemental strand, 11685998 - 11685898
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgt-cgtgtccgtatccgtgcttc 165  Q
    |||||||||||| | |||||||||| ||||||| ||| || | ||||||||||  |||||| | | ||||||| ||||| ||||||||||||||||||||    
T  11685998 cgacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtcggcatgtcagtgt-cgtgtccgtgtccgtatccgtgcttc 11685900  T
Q  166 at 167  Q
    ||    
T  11685899 at 11685898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 7677764 - 7677704
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcg 127  Q
    |||||||||||||| ||||| |||||||||||||||  |||| |||||||||| |||||||    
T  7677764 cgacaccgacacttctaattgcactgaattatgtgattttttcaaattattagctgtgtcg 7677704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 22013458 - 22013387
Alignment:
Q  82 taattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||||||| |||||||| |  |||  |||||||||| ||||||| ||| |||||||||||||||||||||    
T  22013458 taattacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 22013387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 6072352 - 6072417
Alignment:
Q  105 tttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcatact 170  Q
    |||| |||||||||| | ||||| ||| ||||| ||||| |||||||| |||||||||||||||||    
T  6072352 ttttaaaattattagttatgtcggcgtgtcagtatccgtatcgtgtccatatccgtgcttcatact 6072417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 30502351 - 30502440
Alignment:
Q  30 gattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattag 119  Q
    |||||||  ||| |||||||| ||||  |||| |||||||||||||||| | |||||||||||||||| ||||  || | ||||||||||    
T  30502351 gattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattag 30502440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 30542694 - 30542783
Alignment:
Q  30 gattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattag 119  Q
    |||||||  ||| |||||||| ||||  |||| |||||||||||||||| | |||||||||||||||| ||||  || | ||||||||||    
T  30542694 gattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattag 30542783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 168
Target Start/End: Complemental strand, 2436981 - 2436879
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtc--gtgtccgtatccgtgctt 164  Q
    |||||||||||| | |||| |||  |||||||||||  |||  ||||||||||  |||||| ||| |||||||| |||||  ||||||||||||||||||    
T  2436981 cgacaccgacacatataatcacaacgaattatgtgatttttgcaaattattagcggtgtcggcgtgtcagtgtc-gtgtccggtgtccgtatccgtgctt 2436883  T
Q  165 cata 168  Q
    ||||    
T  2436882 cata 2436879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 16203786 - 16203874
Alignment:
Q  58 tgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtc 146  Q
    ||||||||||||||||||||| | |||||||||| ||||||| ||  || | ||||||||||  |||||| | | | ||||||||||||    
T  16203786 tgtcttgtccgacaccgacacatataattacactaaattatgagattttctcaaattattagcagtgtcggcatgttagtgtccgtgtc 16203874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 19552562 - 19552626
Alignment:
Q  86 tacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgt 150  Q
    |||||| ||||||||||  |||| |||||||||  ||||||| ||| ||||||||||||||||||    
T  19552562 tacacttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgt 19552626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 152
Target Start/End: Original strand, 15405062 - 15405138
Alignment:
Q  74 gacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtcc 152  Q
    |||||||||||||||| |||||||| |||  |||| |||||||||| ||||||   || | ||||||||||||||||||    
T  15405062 gacacttgtaattacattgaattatatgattttttcaaattattagttgtgtc--agtgttagtgtccgtgtcgtgtcc 15405138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 27932348 - 27932261
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgt 100  Q
    |||||| |||||| ||  |||||| |||| |  ||||| ||||| |||| ||||||||||| | | ||||||||||||||||||||||    
T  27932348 agcacaaacactcctcgaattaggcgtgtcctggtgtccgacacgtgtcgtgtccgacaccaagatttgtaattacactgaattatgt 27932261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 70 - 148
Target Start/End: Complemental strand, 41995525 - 41995449
Alignment:
Q  70 caccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgt 148  Q
    |||||||||||  ||||||| ||||||||||||  ||||  ||||||||| ||||||| ||| |||||||| |||||||    
T  41995525 caccgacactt--aattacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtctgtgtcgt 41995449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 6770649 - 6770523
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| |||||||||| ||||||| |||| ||||     ||||  |||| |||||||||| ||||| |  || |||||||||||||||||  || |||||    
T  6770649 agcacggacactcttcggattaggcgtgtaccag-----gacatgtgtcgtgtccgacactgacacat--aagtacactgaattatgtgattttcttaaa 6770557  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtc 146  Q
    ||||||| ||||||   || ||||||||||||||    
T  6770556 ttattagttgtgtcagtgtgtcagtgtccgtgtc 6770523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 2548450 - 2548413
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgt 100  Q
    |||||||||||||||||| | |||||||||||||||||    
T  2548450 tgtccgacaccgacacttatgattacactgaattatgt 2548413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 17088337 - 17088284
Alignment:
Q  74 gacacttgtaattacactgaattatgtgacattttt-aaattattagatgtgtc 126  Q
    |||||||||||| ||||| ||||||||||  ||||| |||||||||||||||||    
T  17088337 gacacttgtaatcacactaaattatgtgatttttttcaaattattagatgtgtc 17088284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 30099017 - 30099070
Alignment:
Q  46 gtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatg 99  Q
    ||||||||||| |||| | |||||||||||||| | ||||||||| ||||||||    
T  30099017 gtgtcagacacgtgtcgtatccgacaccgacacatataattacacagaattatg 30099070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 148
Target Start/End: Original strand, 40000555 - 40000616
Alignment:
Q  87 acactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgt 148  Q
    ||||||||||||||||  |||| |||||||||   |||||||| | ||||||||||||||||    
T  40000555 acactgaattatgtgattttttcaaattattaagagtgtcgacatgtcagtgtccgtgtcgt 40000616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 12160007 - 12159951
Alignment:
Q  71 accgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcg 127  Q
    ||||||| ||||||||||| | |||||||||   ||||||||||||||| |||||||    
T  12160007 accgacatttgtaattacattaaattatgtgttttttttaaattattagttgtgtcg 12159951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 12641733 - 12641657
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgt 143  Q
    |||||| ||||| || ||||| ||| ||||||||||  ||||||||||||||  | ||||||||| ||| |||||||    
T  12641733 cgacactgacacgtgcaattatactaaattatgtgatttttttaaattattaactatgtcgacgtgtcattgtccgt 12641657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 23015936 - 23016024
Alignment:
Q  19 gacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacac-----cgacacttgtaattacactgaattatgtga 102  Q
    ||||||| || ||||||| |||| ||| |||| |||||||||| ||||||| ||     |||||| | |||||||||||||||||||||    
T  23015936 gacactcctcggattaggcgtgtcccaatgtcggacacatgtcgtgtccgatacaacatcgacacctataattacactgaattatgtga 23016024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 168
Target Start/End: Complemental strand, 39758276 - 39758244
Alignment:
Q  136 gtgtccgtgtcgtgtccgtatccgtgcttcata 168  Q
    |||||||||||||||||||||||||| ||||||    
T  39758276 gtgtccgtgtcgtgtccgtatccgtgtttcata 39758244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 6e-34; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 13770809 - 13770664
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacac-----cgacacttgtaattacactgaattatgtgacattt 107  Q
    ||||| |||||||||| ||||||| ||||||| ||||| ||||| |||  ||||||||||     |||||||||||||||||||||||||||| |  |||    
T  13770809 agcacggacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgtccgacacgacaacgacacttgtaattacactgaattatgtaattttt 13770710  T
Q  108 ttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||    
T  13770709 ttaaattattagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 13770664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 13 - 160
Target Start/End: Complemental strand, 24105791 - 24105644
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    |||||| |||||| || | ||||| |||| || ||||| |||||||||  || ||||| |||||||||||||||||||||||| |||  |  |||| |||    
T  24105791 agcacaaacactcctcgggttaggcgtgtcccggtgtcggacacatgttgtgcccgactccgacacttgtaattacactgaatcatgcaattttttcaaa 24105692  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgt 160  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||||||    
T  24105691 ttattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgtatccgt 24105644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 25481990 - 25481875
Alignment:
Q  38 gtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagt 137  Q
    ||||| || |||| ||||||| || ||||||||||| ||||||||||||||||||||||||||||  |||| |||||||||| ||||||| ||| ||| |    
T  25481990 gtgtttcaatgtcggacacatatcgtgtccgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcatt 25481891  T
Q  138 gtccgtgtcgtgtccg 153  Q
    |||| ||| |||||||    
T  25481890 gtccatgttgtgtccg 25481875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 24339701 - 24339615
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||||||||||||||||||||||||||||  |||| |||||||||| ||||||| ||| ||| ||||| |||||||||||    
T  24339701 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgtccg 24339615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 151
Target Start/End: Complemental strand, 26733415 - 26733279
Alignment:
Q  15 cacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaatt 114  Q
    ||||||||| | || ||||||| ||||||| || || ||||   ||| |||||||||||||||| | |||||| ||||||||||||||  || | |||||    
T  26733415 cacagacacccctcggattaggcgtgttcccgtatcggacatgcgtcgtgtccgacaccgacacatttaattagactgaattatgtgattttgtcaaatt 26733316  T
Q  115 attagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    |||||  |||||||||| |||||||||||||||||||    
T  26733315 attagcggtgtcgacgtgtcagtgtccgtgtcgtgtc 26733279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 43027410 - 43027554
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtc-----cgacaccgacacttgtaattacactgaattatgtgacattt 107  Q
    ||||| ||||||| || ||||||| |||| || ||||| ||||| |||| ||||     ||||||||||||||||| |||||||| |||||||||  |||    
T  43027410 agcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacacgacaccgacacttgtatttacactgcattatgtgattttt 43027509  T
Q  108 ttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtcc 152  Q
    | |||||||||| || |||| ||| ||||||||||||||||||||    
T  43027510 tcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtcc 43027554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 46 - 168
Target Start/End: Complemental strand, 15680889 - 15680772
Alignment:
Q  46 gtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgt 145  Q
    ||||| ||||| |||| |||||||||||||||||| |||||||||| ||||||||||  ||||| ||||||||| | ||||| ||| ||||||||         
T  15680889 gtgtcggacacgtgtcgtgtccgacaccgacacttataattacactaaattatgtgattttttttaattattagctatgtcggcgtgtcagtgtc----- 15680795  T
Q  146 cgtgtccgtatccgtgcttcata 168  Q
    | |||||||||||||||||||||    
T  15680794 catgtccgtatccgtgcttcata 15680772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 27945100 - 27945014
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||||||||||||||||||||||||| |  || | ||||||||||  |||||| ||| |||||||||||||||||||||    
T  27945100 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccg 27945014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 151
Target Start/End: Complemental strand, 33994280 - 33994187
Alignment:
Q  58 tgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    |||| |||| ||||||||||||||||||| |||||||||||||||| |||| |||||| ||| || |||| ||| ||||||| |||||||||||    
T  33994280 tgtcgtgtctgacaccgacacttgtaattgcactgaattatgtgaccttttcaaattagtagttgcgtcggcgtgtcagtgttcgtgtcgtgtc 33994187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 21864921 - 21864779
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacattttt--a 110  Q
    ||||||||||||| ||  |||||  |||| || ||||| ||||| |||| ||||||||| ||||||||||||||||||| |||||| |||  |||||  |    
T  21864921 agcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgacagcgacacttgtaattacactaaattatatgattttttttca 21864822  T
Q  111 aattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||||||| ||||||   || || ||||||||||||||||||    
T  21864821 aattattagctgtgtccgtgtgtccgtgtccgtgtcgtgtccg 21864779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 63 - 153
Target Start/End: Original strand, 11061072 - 11061162
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||| |||||||||||||||||||| ||| ||||||||||  |||| |||||||||| |||||||  || |||||||||||||||| ||||    
T  11061072 tgtctgacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgtatccg 11061162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 5409777 - 5409922
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgac-----accgacacttgtaattacactgaattatgtgacattt 107  Q
    ||||| ||||||| || ||||||| |||| || ||||| ||||| |||| ||||||||     |||||||||||||||| |||||||||||||||  |||    
T  5409777 agcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttgtaattgcactgaattatgtgattttt 5409876  T
Q  108 ttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    | |||||||||| ||| ||  ||| ||||||||| |||||| ||||    
T  5409877 tcaaattattagctgtatcagcgtgtcagtgtccatgtcgtatccg 5409922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 151
Target Start/End: Original strand, 18212979 - 18213118
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatt-tttaa 111  Q
    ||||||||||||| || ||| ||| |||| || |||||||| |   ||| |||||||||||||||| | |||||||||| ||||||||||  || |  ||    
T  18212979 agcacagacactcctcggataaggcgtgtccccgtgtcagaaaggggtcgtgtccgacaccgacacatataattacactaaattatgtgattttctaaaa 18213078  T
Q  112 attattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    |  ||||| ||||||| |||||||||||||||||||||||    
T  18213079 aaaattagttgtgtcggcgtatcagtgtccgtgtcgtgtc 18213118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 32287409 - 32287567
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| ||||||| || |||||||||||| || ||||| ||||| |||| |||||||||||||||| | || || |||||||||||||||  || | | |    
T  32287409 agcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgacacatatacttgcactgaattatgtgattttctcaga 32287508  T
Q  113 ttattagatgtgtcgacgtatcagtgt-ccgtgt--cgtgtccgtatccgtgcttcata 168  Q
    |||||||  |||||||| |||| || |  |||||  ||||||||||||| |||||||||    
T  32287509 ttattagcggtgtcgacatatctgtctatcgtgtcccgtgtccgtatccatgcttcata 32287567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 151
Target Start/End: Complemental strand, 598321 - 598183
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| ||||||  || ||||||| |||| || ||||| ||||| |||| |||| |||||||||||||  ||||||| | ||||| ||||  || |||||    
T  598321 agcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacttacaattacatttaattacgtgattttcttaaa 598222  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    |||||||  ||||||| || |||||||||||||| ||||    
T  598221 ttattagcggtgtcgatgtgtcagtgtccgtgtcatgtc 598183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 145
Target Start/End: Original strand, 7197293 - 7197375
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgt 145  Q
    ||||||||||||||||||||||||||| |||||||  |||  ||||||||||||||| ||||||| ||| ||| |||| ||||    
T  7197293 tgtccgacaccgacacttgtaattacattgaattaaatgatttttttaaattattagctgtgtcggcgtgtcaatgtctgtgt 7197375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 3991383 - 3991323
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcg 127  Q
    ||||||||||||||||||||| ||||||||||||||  |||| |||||||||| |||||||    
T  3991383 cgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagttgtgtcg 3991323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 27093365 - 27093465
Alignment:
Q  19 gacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattatta 118  Q
    ||||||| || |||||||||||| | |||||| |||||||||| ||||  |||||||| | | |||||||||| ||||||||||  || |||||||||||    
T  27093365 gacactcatcggattaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattttcttaaattatta 27093464  T
Q  119 g 119  Q
    |    
T  27093465 g 27093465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 27184936 - 27184836
Alignment:
Q  19 gacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattatta 118  Q
    ||||||| || |||||||||||| | |||||| |||||||||| ||||  |||||||| | | |||||||||| ||||||||||  || |||||||||||    
T  27184936 gacactcatcggattaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattttcttaaattatta 27184837  T
Q  119 g 119  Q
    |    
T  27184836 g 27184836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 140
Target Start/End: Complemental strand, 5835324 - 5835233
Alignment:
Q  49 tcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtc 140  Q
    ||||||||||||| |||| ||||||||||| | ||||||||||||||||||| |  || | ||| ||||||  |||||| ||||||||||||    
T  5835324 tcagacacatgtcatgtctgacaccgacacatataattacactgaattatgttattttctcaaactattagtggtgtcggcgtatcagtgtc 5835233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 168
Target Start/End: Complemental strand, 15902879 - 15902780
Alignment:
Q  69 acaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcata 168  Q
    |||||||||| | |||||||||| ||||||||||  || | |||||||||   |||||| | | |||||||| ||||||||||||||| |||||||||||    
T  15902879 acaccgacacatataattacactaaattatgtgattttatcaaattattattggtgtcggcatgtcagtgtctgtgtcgtgtccgtattcgtgcttcata 15902780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 146
Target Start/End: Original strand, 18215186 - 18215265
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtc 146  Q
    |||||||||||||||||| ||||||| |||||||||  |||| |||||||||| || |||| ||| | ||||||||||||    
T  18215186 cgacaccgacacttgtaactacactgcattatgtgattttttcaaattattagctgcgtcggcgtgttagtgtccgtgtc 18215265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 21880265 - 21880178
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgt 100  Q
    ||||| ||||||  || ||||||| |||| |  ||||| ||||  |||| ||||||||||||||||||||||||||||||||||||||    
T  21880265 agcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgt 21880178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 1401130 - 1401032
Alignment:
Q  19 gacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattatta 118  Q
    ||||||| ||||||||||||||| ||  |||| ||||  |||| |||| |||||||| |||| |||||||||||||||||||||  || | |||||||||    
T  1401130 gacactcctcagattaggtgtgtcccgatgtcggaca--tgtcgtgtcggacaccgatacttataattacactgaattatgtgagtttctcaaattatta 1401033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 168
Target Start/End: Complemental strand, 2334309 - 2334205
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacattttt--aaattattagatgtgtcgacgtatcagtgtccgtgt-cgtgtccgtatccgtgct 163  Q
    ||||||||||||||||||||||||| ||||||||||  |||||  |||||||||  | ||||| ||| |||| |  ||||| |||||| |||||||||||    
T  2334309 cgacaccgacacttgtaattacactaaattatgtgattttttttcaaattattaactttgtcgccgtgtcaggggacgtgtccgtgtctgtatccgtgct 2334210  T
Q  164 tcata 168  Q
    |||||    
T  2334209 tcata 2334205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 127
Target Start/End: Complemental strand, 8234214 - 8234145
Alignment:
Q  58 tgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcg 127  Q
    |||| |||||||||||| ||||||||| ||||||||||||||| |  |||| |||||||||| |||||||    
T  8234214 tgtcgtgtccgacaccggcacttgtaactacactgaattatgttattttttcaaattattagttgtgtcg 8234145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 140
Target Start/End: Original strand, 9408334 - 9408407
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtc 140  Q
    ||||||||||||||||||||||||| ||||||||||  |||| |||||||||  |||||||  || ||||||||    
T  9408334 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaattgtgtcggtgtgtcagtgtc 9408407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 118
Target Start/End: Complemental strand, 18039058 - 18039006
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacattttt-aaattatta 118  Q
    ||||||||||||||||||||||||||||||||||||  ||||| |||||||||    
T  18039058 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattatta 18039006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 19213866 - 19213810
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattag 119  Q
    ||||||||||||||||||||| |||||||| |||||||||  |||| ||||||||||    
T  19213866 tgtccgacaccgacacttgtatttacactgcattatgtgattttttaaaattattag 19213810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 26033465 - 26033513
Alignment:
Q  71 accgacacttgtaattacactgaattatgtgacatttttaaattattag 119  Q
    ||||||||||||||||||||||||||||||||  |||| ||||||||||    
T  26033465 accgacacttgtaattacactgaattatgtgattttttcaaattattag 26033513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 127
Target Start/End: Complemental strand, 7438764 - 7438705
Alignment:
Q  68 gacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcg 127  Q
    |||||||||||||||||||||| ||||||||||||  |||| |||||||||  |||||||    
T  7438764 gacaccgacacttgtaattacattgaattatgtgattttttcaaattattaactgtgtcg 7438705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 9778559 - 9778500
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtc 126  Q
    ||||||||||||||||||||| ||||||||||||||  |||| ||||||| || ||||||    
T  9778559 cgacaccgacacttgtaattatactgaattatgtgattttttcaaattatcagctgtgtc 9778500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 102
Target Start/End: Complemental strand, 21560562 - 21560527
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtga 102  Q
    ||||||||||||||||||||||||||||||||||||    
T  21560562 cgacaccgacacttgtaattacactgaattatgtga 21560527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 32094020 - 32094079
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacattttt-aaattattagatgtgt 125  Q
    ||||||||||| ||||||||||||||||||||||||  ||||| |||||||||| |||||    
T  32094020 cgacaccgacatttgtaattacactgaattatgtgatttttttcaaattattagttgtgt 32094079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 138
Target Start/End: Original strand, 11272586 - 11272659
Alignment:
Q  67 cgacaccgacacttgtaattacactgaat--tatgtgacatttttaaattattagatgtgtcgacgtatcagtg 138  Q
    |||||||||||||||||||||||||||||  |||||||  |||| ||||||| || ||||||| ||| ||||||    
T  11272586 cgacaccgacacttgtaattacactgaattatatgtgattttttcaaattatcagttgtgtcggcgtctcagtg 11272659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 13557750 - 13557830
Alignment:
Q  76 cacttgtaattacactgaattatgtga---catttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||||||||||||||||||     ||||||||||||||| | ||||| ||| |||||||| ||||| ||||||    
T  13557750 cacttgtaattacactgaattatgtgattttttttttaaattattagttttgtcggcgtgtcagtgtctgtgtcatgtccg 13557830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 139
Target Start/End: Complemental strand, 41020553 - 41020483
Alignment:
Q  69 acaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgt 139  Q
    |||||||| | | |||||||||| ||||||||||  ||| ||||||||||| ||||||||||| |||||||    
T  41020553 acaccgacgcatataattacactaaattatgtgatttttgtaaattattagttgtgtcgacgtgtcagtgt 41020483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 168
Target Start/End: Complemental strand, 10042996 - 10042895
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttca 166  Q
    |||||| ||||||| ||||||| || ||||||||||  || | ||||||||||  |||||| ||| | |||||||||||||| || |||||  |||||||    
T  10042996 cgacactgacacttataattacgctaaattatgtgaatttatcaaattattagtggtgtcggcgtgtaagtgtccgtgtcgtatcggtatctttgcttca 10042897  T
Q  167 ta 168  Q
    ||    
T  10042896 ta 10042895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 28155633 - 28155596
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgt 100  Q
    |||||||||||||||||||||||||||| |||||||||    
T  28155633 tgtccgacaccgacacttgtaattacaccgaattatgt 28155596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 28401159 - 28401102
Alignment:
Q  110 aaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcat 167  Q
    ||||||||||  |||||||||| |  ||| ||||||||||||||||||||||||||||    
T  28401159 aaattattagtagtgtcgacgtgttggtgcccgtgtcgtgtccgtatccgtgcttcat 28401102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 165
Target Start/End: Original strand, 11722121 - 11722197
Alignment:
Q  90 ctgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtcc-gtatccgtgcttc 165  Q
    |||||||||||||  || | ||||| ||||  |||||| ||| |||||||||||||||||||| |||||||||||||    
T  11722121 ctgaattatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtgcttc 11722197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 151
Target Start/End: Complemental strand, 21826336 - 21826248
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    |||||||||||||||| | | |||| ||||| ||||||||  |||||||||||||||  |||||| ||| | ||||||  |||||||||    
T  21826336 tgtccgacaccgacacatattattagactgagttatgtgatttttttaaattattagtcgtgtcggcgtgttagtgtctatgtcgtgtc 21826248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 143
Target Start/End: Complemental strand, 23191959 - 23191879
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgt 143  Q
    |||| ||||| || || ||||||||||||||| |||||||  || | ||||||||||  |||||| |||||||||||||||    
T  23191959 tgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcggtgtcggcgtatcagtgtccgt 23191879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 168
Target Start/End: Complemental strand, 43250046 - 43249950
Alignment:
Q  73 cgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtcc-gtatccgtgcttcata 168  Q
    |||||||| ||||||||||| ||||||| |  || | |||||||||   |||||| ||| |||||||||||||| ||||| || |||||||||||||    
T  43250046 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcttgtccggtgtccgtgcttcata 43249950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 168
Target Start/End: Complemental strand, 11700804 - 11700769
Alignment:
Q  133 tcagtgtccgtgtcgtgtccgtatccgtgcttcata 168  Q
    |||| |||||||||||||||||||||||||||||||    
T  11700804 tcagcgtccgtgtcgtgtccgtatccgtgcttcata 11700769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 19992060 - 19992001
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtc 126  Q
    |||||||||||||| ||||||||||||| |||||||  || | |||||||||| ||||||    
T  19992060 cgacaccgacacttataattacactgaaatatgtgattttctcaaattattagctgtgtc 19992001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 21140982 - 21141065
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgt 150  Q
    |||| ||||||| | |||| |||||||||||| |||  || ||||||||||||  |||||||||| || | |||||||||||||    
T  21140982 cgactccgacacctataatcacactgaattatatgattttcttaaattattagtggtgtcgacgtgtcggcgtccgtgtcgtgt 21141065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 2034481 - 2034407
Alignment:
Q  86 tacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgt 160  Q
    |||||| |||||| ||| ||| | ||||||||||  |||||||||| | ||| ||||||||||||| ||||||||    
T  2034481 tacactaaattatatgatattctcaaattattagtggtgtcgacgtgtaagtatccgtgtcgtgtcagtatccgt 2034407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 152
Target Start/End: Complemental strand, 5236030 - 5235960
Alignment:
Q  82 taattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtcc 152  Q
    |||||||||| |||||| | |  || ||||||||||||  |||||||||| |||||||| |||||||||||    
T  5236030 taattacactaaattatataattttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgtcc 5235960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 126
Target Start/End: Original strand, 11665441 - 11665499
Alignment:
Q  68 gacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtc 126  Q
    |||| |||||||| |||||| ||||||||||||||  |||| |||||||||| ||||||    
T  11665441 gacatcgacacttataattagactgaattatgtgattttttcaaattattagttgtgtc 11665499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 140
Target Start/End: Original strand, 6630912 - 6630985
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtc 140  Q
    ||||| |||||| | |||||||||||||||| ||||| || | ||||||||||  |||||| ||| ||||||||    
T  6630912 cgacatcgacacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagtgtc 6630985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 148
Target Start/End: Original strand, 18013074 - 18013155
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgt 148  Q
    |||||| ||||| | ||||||||||||||||||| |  |||||||||||||||  |||||    | ||||||||||||||||    
T  18013074 cgacactgacacatataattacactgaattatgtaatttttttaaattattagtagtgtcagaatgtcagtgtccgtgtcgt 18013155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 164
Target Start/End: Complemental strand, 19206108 - 19206011
Alignment:
Q  68 gacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtc-cgtatccgtgctt 164  Q
    ||||||||||| | |||||| | ||||||||||||  || | ||||||||||  |||||| ||| |  ||||||||||||||||  ||||||||||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtctggtatccgtgctt 19206011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 96
Target Start/End: Complemental strand, 25822714 - 25822685
Alignment:
Q  67 cgacaccgacacttgtaattacactgaatt 96  Q
    ||||||||||||||||||||||||||||||    
T  25822714 cgacaccgacacttgtaattacactgaatt 25822685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 25956508 - 25956471
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgt 100  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  25956508 tgtccgacaccgacacttgtgattacattgaattatgt 25956471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 39138557 - 39138468
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtga 102  Q
    |||||||| ||||||  ||| ||| |||| || |||| |||||  | || |||||||||||||||  | |||||||||||||||||||||    
T  39138557 agcacagatactcttgggataaggcgtgtccccgtgttagacatgtatcgtgtccgacaccgacatatataattacactgaattatgtga 39138468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 151
Target Start/End: Complemental strand, 6028684 - 6028600
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    ||||||||||| ||||||||||| | |||||||| | ||||| |||||||||    | |||| || |||||||| ||||||||||    
T  6028684 cgacaccgacatttgtaattacattaaattatgttatattttcaaattattaaccatatcgatgtgtcagtgtctgtgtcgtgtc 6028600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 7058485 - 7058433
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattag 119  Q
    ||||||| |||||||||||||||||||||||  |||  |||| ||||||||||    
T  7058485 cgacaccaacacttgtaattacactgaattacatgattttttcaaattattag 7058433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 20549854 - 20549798
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattag 119  Q
    |||||||||||||||| | |||||||||||||||| ||||  || | ||||||||||    
T  20549854 tgtccgacaccgacacatataattacactgaattacgtgattttctcaaattattag 20549798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 154
Target Start/End: Complemental strand, 22868086 - 22868014
Alignment:
Q  82 taattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgt 154  Q
    |||||||||||||||||||||  || | | ||||||||  |||||| ||| |||||||| |||| ||||||||    
T  22868086 taattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagtgtcggtgttgtgtccgt 22868014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 29999061 - 29999101
Alignment:
Q  105 tttttaaattattagatgtgtcgacgtatcagtgtccgtgt 145  Q
    ||||| |||||||||||||||||||||| ||||||| ||||    
T  29999061 ttttttaattattagatgtgtcgacgtagcagtgtctgtgt 29999101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 35862023 - 35861963
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcg 127  Q
    |||||| |||||||  ||||||| ||||||||||||  |||| |||||||||| |||||||    
T  35862023 cgacacagacacttacaattacattgaattatgtgattttttcaaattattagttgtgtcg 35861963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 95
Target Start/End: Original strand, 40287353 - 40287385
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaat 95  Q
    ||||||| |||||||||||||||||||||||||    
T  40287353 tgtccgataccgacacttgtaattacactgaat 40287385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 6e-34; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 13 - 150
Target Start/End: Original strand, 42359395 - 42359532
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| ||||||| || ||||||| |||| || ||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||  |||| |||    
T  42359395 agcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaa 42359494  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtcgtgt 150  Q
    ||||||||||||||  ||| ||||||||||||| ||||    
T  42359495 ttattagatgtgtcagcgtgtcagtgtccgtgttgtgt 42359532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 63 - 168
Target Start/End: Original strand, 19058852 - 19058958
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatc-agtgtccgtgtcgtgtccgtatccgtg 161  Q
    |||||||||||||||||||||||||||||||||||||| |  ||||||||||||||| ||||||| ||| || |||||  ||||||||||||||||||||    
T  19058852 tgtccgacaccgacacttgtaattacactgaattatgttatctttttaaattattagctgtgtcggcgtgtcaagtgtgtgtgtcgtgtccgtatccgtg 19058951  T
Q  162 cttcata 168  Q
    |||||||    
T  19058952 cttcata 19058958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 46 - 168
Target Start/End: Original strand, 46348362 - 46348479
Alignment:
Q  46 gtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgt 145  Q
    ||||| ||||| |||| ||||||||||||||||||||||||||||| |||||| |||  |||| |||||||||| ||||||| ||| ||||||||         
T  46348362 gtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtc----- 46348456  T
Q  146 cgtgtccgtatccgtgcttcata 168  Q
    |||||||||||||||||||||||    
T  46348457 cgtgtccgtatccgtgcttcata 46348479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 142
Target Start/End: Complemental strand, 37598944 - 37598816
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| ||||||| || ||||||| |||| ||| |||| ||||| |||| |||||||||||||||||| ||||||||||||||| |||||  |||| |||    
T  37598944 agcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaatt-tgtgattttttcaaa 37598846  T
Q  113 ttattagatgtgtcgacgtatcagtgtccg 142  Q
    ||||||| ||||||| ||| ||||||||||    
T  37598845 ttattagttgtgtcggcgtgtcagtgtccg 37598816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 58 - 160
Target Start/End: Original strand, 38078652 - 38078756
Alignment:
Q  58 tgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtc--gtgtccgta 155  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||  |||| |||||||||| ||||||||||| ||||||| ||||||  ||||||||     
T  38078652 tgtcgtgtccgacaccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgttcgtgtccggtgtccgtg 38078751  T
Q  156 tccgt 160  Q
    |||||    
T  38078752 tccgt 38078756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 72 - 168
Target Start/End: Original strand, 48450592 - 48450688
Alignment:
Q  72 ccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcata 168  Q
    |||||||||||||||||||| |||||||| |  |||| |||||||||| ||||| | ||| |||||||||||||||||||||||||| |||||||||    
T  48450592 ccgacacttgtaattacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgtccgtatccatgcttcata 48450688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 1486650 - 1486804
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgac-----accgacacttgtaattacactgaattatgtgacattt 107  Q
    ||||||||||||| || ||||||| |||| || ||||| ||||| |||| ||||||||     |||||||||| |||||||||||||||||||||  |||    
T  1486650 agcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtgattttt 1486749  T
Q  108 ttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtcc-gtatccgtg 161  Q
    | |||||||||| ||||||  ||| ||||| |||||||||| ||| |||||||||    
T  1486750 tcaaattattagctgtgtcagcgtgtcagtatccgtgtcgtatccggtatccgtg 1486804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 143
Target Start/End: Complemental strand, 1815362 - 1815240
Alignment:
Q  21 cactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattaga 120  Q
    ||||| |||||||||| |||| || ||||| ||||  |||| |||| |||||||||||||||||||||||||||||||||||  |||| |||| ||||      
T  1815362 cactcctcagattaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgacacttgtaattacactgaattatgtgattttttaaaataattatt 1815263  T
Q  121 tgtgtcgacgtatcagtgtccgt 143  Q
    ||||||| ||| |||||||||||    
T  1815262 tgtgtcggcgtgtcagtgtccgt 1815240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 14359529 - 14359622
Alignment:
Q  74 gacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcata 168  Q
    |||||||||||||||||| ||||||||||  |||| |||||||||| ||||||| ||| || ||||| |||||||||||||||||||||||||||    
T  14359529 gacacttgtaattacactaaattatgtgat-ttttcaaattattagctgtgtcggcgtgtccgtgtctgtgtcgtgtccgtatccgtgcttcata 14359622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 28273089 - 28273189
Alignment:
Q  68 gacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcat 167  Q
    ||||||||||||||||||||||||||||||| |||  |||| |||| ||||| ||||||  | | ||||||||| |||| ||||||||||||||||||||    
T  28273089 gacaccgacacttgtaattacactgaattatatgattttttcaaatgattagttgtgtcagcatgtcagtgtccttgtcatgtccgtatccgtgcttcat 28273188  T
Q  168 a 168  Q
    |    
T  28273189 a 28273189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 151
Target Start/End: Complemental strand, 47989556 - 47989473
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||  ||||||| ||| |||||||| ||||||||||    
T  47989556 cgacaccgacacttgtaattacactgaattatgtgatttttttaaattatta-ttgtgtcggcgtgtcagtgtctgtgtcgtgtc 47989473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 168
Target Start/End: Complemental strand, 51410093 - 51409982
Alignment:
Q  58 tgtcttgtccgacaccgacacttgtaattacactgaattatgtgacattttt-aaattattagatgtgtcgacgtatcagtgtccgtgt-cgtgtccgta 155  Q
    |||| ||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||| | | || || |  |||| ||||||||||    
T  51410093 tgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagatgtgtcggcatgtccgt-tttgtgtccgtgtccgta 51409995  T
Q  156 tccgtgcttcata 168  Q
    |||||||||||||    
T  51409994 tccgtgcttcata 51409982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 5898212 - 5898367
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| ||||||| || ||||||  |||| || ||||  ||||| |||| |||| ||||||||| | | |||||||||||||||||||||  |||| | |    
T  5898212 agcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgacgcatataattacactgaattatgtgattttttcaga 5898311  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcata 168  Q
    |||||||  |||||| ||| |||||||| ||||| |||||||||||||||| ||||    
T  5898312 ttattagcggtgtcggcgtctcagtgtctgtgtcatgtccgtatccgtgctacata 5898367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 140
Target Start/End: Original strand, 22881607 - 22881689
Alignment:
Q  58 tgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtc 140  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||  |||| |||||||||| ||||||| ||| ||||||||    
T  22881607 tgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 22881689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 18337442 - 18337338
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| ||||||| || ||| |||  ||| |||||||| ||||| |||  ||||||||||||||||||||||||||||||||||||||||  |||| |||    
T  18337442 agcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaa 18337343  T
Q  113 ttatt 117  Q
    |||||    
T  18337342 ttatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 168
Target Start/End: Original strand, 24577186 - 24577288
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgt--cgtgtccgtatccgtgctt 164  Q
    ||||||||||||||||||||||||||||||||||||  |||| |||||||||| ||||||  ||| || |||| |||||   ||||||||||||||||||    
T  24577186 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcagcgtgtccgtgt-cgtgttcagtgtccgtatccgtgctt 24577284  T
Q  165 cata 168  Q
    ||||    
T  24577285 cata 24577288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 63 - 168
Target Start/End: Original strand, 35702584 - 35702690
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtc--gtgtccgtatccgt 160  Q
    |||||||||| |||||||||||||||||| |||||| |||  |||| |||||||||| ||||||| | | ||||||| ||||||  ||||||||||||||    
T  35702584 tgtccgacactgacacttgtaattacacttaattatttgaagttttcaaattattagctgtgtcggcatgtcagtgt-cgtgtccggtgtccgtatccgt 35702682  T
Q  161 gcttcata 168  Q
    ||||||||    
T  35702683 gcttcata 35702690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 144
Target Start/End: Original strand, 22515833 - 22515964
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| ||||||| || ||||||| ||||  | ||||| || |  |||| ||||||||||||||||||||||||||||| ||||||||||  |||| |||    
T  22515833 agcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaa 22515932  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtg 144  Q
    ||||||| ||||||  ||| || |||||||||    
T  22515933 ttattagctgtgtctgcgtgtccgtgtccgtg 22515964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 5376500 - 5376586
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||||| ||||||||||||||||||| |  || ||||||||||||  |||||| ||| | |||||||||||||||||||    
T  5376500 cgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtgtccg 5376586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 6612171 - 6612257
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||||||||||||||||||||||||| |  |||| |||||||||  ||| ||| ||| ||| |||||||||||||||||    
T  6612171 cgacaccgacacttgtaattacactgaattatgtaattttttcaaattattaactgtatcggcgtgtcattgtccgtgtcgtgtccg 6612257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 18190061 - 18190167
Alignment:
Q  20 acactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattag 119  Q
    |||||| || |||||||||||| || ||||| ||||| |||  |||| |||| |||||||||||||||||||||||||||| |  |||| ||||||||||    
T  18190061 acactcctcggattaggtgtgtcccggtgtcggacacgtgttgtgtctgacatcgacacttgtaattacactgaattatgtaattttttcaaattattag 18190160  T
Q  120 atgtgtc 126  Q
     ||||||    
T  18190161 gtgtgtc 18190167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 31694710 - 31694796
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacattttt--aaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||||||||||||| ||||||||||||||  |||||  |||||||||| | ||||||||||||||||||  |||||||||||    
T  31694710 cgacaccgacacttgtaattatactgaattatgtgattttttttcaaattattagctatgtcgacgtatcagtgtc--tgtcgtgtccg 31694796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 63 - 168
Target Start/End: Complemental strand, 36878524 - 36878418
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgt-cgtgtccgtatccgtg 161  Q
    |||| ||||||||||| | |||||||||||||||||||||  || | ||||||||||  |||||| ||| ||||||||  ||| ||||||||||||||||    
T  36878524 tgtcagacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtctatgtccgtgtccgtatccgtg 36878425  T
Q  162 cttcata 168  Q
    |||||||    
T  36878424 cttcata 36878418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 5944342 - 5944254
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacattttt--aaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||||| |||||||||||||||||||||  |||||  |||||||||| |||| || ||| |||||||| ||||||||||||    
T  5944342 cgacaccgacacttataattacactgaattatgtgattttttttcaaattattagctgtggcggcgtgtcagtgtctgtgtcgtgtccg 5944254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 168
Target Start/End: Original strand, 9629900 - 9630001
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttca 166  Q
    |||||||||||||| |||| |||||||||||| |||  || | ||||||||||  ||||||| || || |||||| ||||||| ||||||||||||||||    
T  9629900 cgacaccgacacttataatcacactgaattatatgattttatcaaattattagcggtgtcgatgtgtcggtgtccatgtcgtggccgtatccgtgcttca 9629999  T
Q  167 ta 168  Q
    ||    
T  9630000 ta 9630001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 127
Target Start/End: Original strand, 1704992 - 1705052
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcg 127  Q
    |||||||||||||||||||||| |||||||||||||  |||| ||||||||||||||||||    
T  1704992 cgacaccgacacttgtaattaccctgaattatgtgattttttcaaattattagatgtgtcg 1705052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 154
Target Start/End: Original strand, 2896084 - 2896208
Alignment:
Q  30 gattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgac 129  Q
    |||||||||||| || || || |||||||||| |||| ||||||||||  | ||  |||||||||||||||||  || | ||||||||||  |||||| |    
T  2896084 gattaggtgtgtcccggtctcggacacatgtcgtgtctgacaccgacatatatagctacactgaattatgtgattttctcaaattattagcggtgtcggc 2896183  T
Q  130 gtatcagtgtccgtgtcgtgtccgt 154  Q
    || ||||||||||||| ||||||||    
T  2896184 gtgtcagtgtccgtgttgtgtccgt 2896208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 5927286 - 5927426
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| ||||||| ||||||||||  |||| |  |||| ||||  |||| |||||||||| |||||||||||||||| | |||||| |||  |||| |||    
T  5927286 agcacggacactcctcagattaggcatgtttcgatgtcggacatttgtcatgtccgacactgacacttgtaattacattaaattatatgattttttcaaa 5927385  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||||  ||||   ||| |||||||||||||||||||||    
T  5927386 ttattagcagtgttagcgtgtcagtgtccgtgtcgtgtccg 5927426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 40258885 - 40258993
Alignment:
Q  19 gacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattatta 118  Q
    ||||||| || ||||||| |||| |  ||||| ||||  |||| |||| |||||||||||||||||||||||||||||||||||  |||| |||||||||    
T  40258885 gacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 40258984  T
Q  119 gatgtgtcg 127  Q
      |||||||    
T  40258985 attgtgtcg 40258993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 151
Target Start/End: Original strand, 41877466 - 41877554
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    ||||||||||||||||||||||||||||| |||||||| |  || | ||||||||||  |||||| |||| ||||||| ||||||||||    
T  41877466 tgtccgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtcggcgtaccagtgtctgtgtcgtgtc 41877554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 82 - 153
Target Start/End: Original strand, 398780 - 398851
Alignment:
Q  82 taattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||||||||||||  |||| ||||||||||  |||||| ||| |||||||||||||||||||||    
T  398780 taattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccg 398851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 67 - 146
Target Start/End: Original strand, 18556456 - 18556535
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtc 146  Q
    ||||||| | ||||||||||||| | |||||||||| ||||| |||||||||| ||||||| ||| ||||||||||||||    
T  18556456 cgacaccaatacttgtaattacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 18556535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 48040465 - 48040548
Alignment:
Q  71 accgacacttgtaattacactgaattatgtgacattttt-aaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||||| ||||||| || |||||||| ||||| |||||||||  ||||||| ||| |||||||||||||||||||||    
T  48040465 accgacacttgtatttacactaaaatatgtgacctttttcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 48040548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 18471355 - 18471262
Alignment:
Q  71 accgacacttgtaattacactgaattatgtgacattttt--aaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg-tatccgtg 161  Q
    ||||||||||||||||| ||||||||||||||  |||||  |||||||||| ||||||||||  ||| |||||||||||| |||| ||||||||    
T  18471355 accgacacttgtaattatactgaattatgtgattttttttcaaattattagctgtgtcgacgggtcattgtccgtgtcgtatccgatatccgtg 18471262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 31672891 - 31672969
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtcc 141  Q
    ||||||||||||| ||||||||||||||||||||| ||||  |||| |||||||||| |||||||  || |||||||||    
T  31672891 tgtccgacaccgagacttgtaattacactgaattaagtgattttttcaaattattagctgtgtcggtgtgtcagtgtcc 31672969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 113358 - 113289
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcag 136  Q
    ||||||| ||||||||||||||||||||||||||||  |||| |||||||||| ||||||| ||| ||||    
T  113358 cgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcag 113289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 16297227 - 16297369
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacacc---gacacttgtaattacactgaattatgtgacattttt 109  Q
    ||||| ||||||| || ||||||| |||| |  ||||| |||||| ||| |||||||||||   |||| |||||||||||||||||| |||||  ||||     
T  16297227 agcacggacactcctcggattaggcgtgtcctggtgtcggacacacgtcgtgtccgacaccccggaca-ttgtaattacactgaattttgtgattttttc 16297325  T
Q  110 aaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    | |||||| | ||||||||||| ||||| ||||| |||||||||    
T  16297326 atattatttgctgtgtcgacgtgtcagtatccgtatcgtgtccg 16297369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 157
Target Start/End: Complemental strand, 21378635 - 21378547
Alignment:
Q  69 acaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatc 157  Q
    |||||||||||||||||||||||||||||||| |  |||| || ||||||| |||||||  || ||  |||||||||||||||| ||||    
T  21378635 acaccgacacttgtaattacactgaattatgtaattttttcaatttattagctgtgtcggtgtgtccatgtccgtgtcgtgtccatatc 21378547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 168
Target Start/End: Original strand, 32434718 - 32434814
Alignment:
Q  69 acaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtc-gacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcat 167  Q
    |||| |||||||||||||||| ||||||||||||| |||| |||||||||| |||||| |  || ||||||||||    |||||| ||||||||||||||    
T  32434718 acacagacacttgtaattacaatgaattatgtgactttttcaaattattagttgtgtcggtggtgtcagtgtccg----gtgtccatatccgtgcttcat 32434813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 40917808 - 40917724
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||||||| ||||||||||||||| ||||  ||||  |||| |||||||||| ||||||| ||| ||||| |||||||||||||||    
T  40917808 cgacaccgagacttgtaattacacttaatt--gtgattttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtccg 40917724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 153
Target Start/End: Complemental strand, 30749920 - 30749815
Alignment:
Q  46 gtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatt-tttaaattattagatgtgtcgacgtatcagtgtccgtg 144  Q
    |||||| ||||||||  |||||||||||||||| | |||||||||||||||||||||  || |  |||  ||||||||||||||||   | |||||||||    
T  30749920 gtgtcaaacacatgtggtgtccgacaccgacacatataattacactgaattatgtgattttctaaaaaaaattagatgtgtcgacg---cggtgtccgtg 30749824  T
Q  145 tcgtgtccg 153  Q
    |||||||||    
T  30749823 tcgtgtccg 30749815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 153
Target Start/End: Complemental strand, 30771371 - 30771266
Alignment:
Q  46 gtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatt-tttaaattattagatgtgtcgacgtatcagtgtccgtg 144  Q
    |||||| ||||||||  |||||||||||||||| | |||||||||||||||||||||  || |  |||  ||||||||||||||||   | |||||||||    
T  30771371 gtgtcaaacacatgtggtgtccgacaccgacacatataattacactgaattatgtgattttctaaaaaaaattagatgtgtcgacg---cggtgtccgtg 30771275  T
Q  145 tcgtgtccg 153  Q
    |||||||||    
T  30771274 tcgtgtccg 30771266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 31015097 - 31015020
Alignment:
Q  72 ccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtg 149  Q
    |||||||||||||||||||||||||||||||  || | |||||||||| ||||| | ||  |||||| ||||||||||    
T  31015097 ccgacacttgtaattacactgaattatgtgattttctcaaattattagctgtgtaggcgcgtcagtgcccgtgtcgtg 31015020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 63 - 151
Target Start/End: Complemental strand, 9103702 - 9103615
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    |||||||||||||||||||| |||| ||| ||||||||||  |||| |||||||||  ||||||| ||| |||||||||| ||| ||||    
T  9103702 tgtccgacaccgacacttgt-attaaactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgagtcctgtc 9103615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 150
Target Start/End: Original strand, 13011223 - 13011299
Alignment:
Q  75 acacttgtaattacactgaattatgtgacattttt-aaattattagatgtgtcgacgtatcagtgtccgtgtcgtgt 150  Q
    ||||||||||||||||| ||||||||||  ||||| |||||||||| ||||||| | | ||||||| ||||||||||    
T  13011223 acacttgtaattacacttaattatgtgatttttttcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtgt 13011299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 63 - 99
Target Start/End: Original strand, 24334701 - 24334737
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatg 99  Q
    |||||||||||||||||||||||||||||||||||||    
T  24334701 tgtccgacaccgacacttgtaattacactgaattatg 24334737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 43113047 - 43112999
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtc 61  Q
    ||||||||| ||||||||||||||||||| || ||||||||||||||||    
T  43113047 agcacagactctcttcagattaggtgtgtcccggtgtcagacacatgtc 43112999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 6332729 - 6332671
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtc 126  Q
    ||||||||| ||||||||||||||||||||||||||  |||| |||||||||| ||||||    
T  6332729 cgacaccgatacttgtaattacactgaattatgtga-tttttcaaattattagttgtgtc 6332671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 168
Target Start/End: Complemental strand, 17778605 - 17778515
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttca 166  Q
    ||||||||||||||||||||||||||   |||||||  |||| |||||||||| ||||||         || ||||||||||||||||||||||||||||    
T  17778605 cgacaccgacacttgtaattacactg---tatgtgattttttcaaattattagctgtgtct--------gtctccgtgtcgtgtccgtatccgtgcttca 17778517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 20157350 - 20157436
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||| | | |||||||||||||||||||  || | | ||||||||  ||||||| || |||||| ||||||||||||||    
T  20157350 cgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtcgatgtgtcagtgcccgtgtcgtgtccg 20157436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 151
Target Start/End: Complemental strand, 9709883 - 9709795
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    |||||||||||||||| | ||||||||  |||||||||||  || | ||||||||||  |||| | | | |||||||||||||||||||    
T  9709883 tgtccgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgtc 9709795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 10572591 - 10572675
Alignment:
Q  69 acaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||||||| | ||||||||| |||||||||||  || | ||||||||||  |||||| ||| ||||||| | |||||||||||    
T  10572591 acaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgttcatgtcgtgtccg 10572675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 10577681 - 10577821
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| ||||||| |  ||| ||| |||| || |||||||||||  ||| |||||| | ||||||| | ||||||||||| ||| |||||  || | |||    
T  10577681 agcacggacactccttggataaggcgtgtccccgtgtcagacacgcgtcgtgtccgcccccgacacatataattacactgcattttgtgattttctaaaa 10577780  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
      ||||| ||||||| ||| || ||||||||||||||||||    
T  10577781 aaattagctgtgtcggcgtgtcggtgtccgtgtcgtgtccg 10577821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 150
Target Start/End: Original strand, 16927200 - 16927268
Alignment:
Q  82 taattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgt 150  Q
    ||||||||||||||||| |||  |||| |||||||||| | || |||||| |||||||| |||||||||    
T  16927200 taattacactgaattatatgattttttcaaattattagctatgccgacgtgtcagtgtctgtgtcgtgt 16927268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 29144365 - 29144437
Alignment:
Q  74 gacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtc 146  Q
    ||||||||||||||||||| ||||| |    |||| |||||||||| ||||||| |||||||||||| |||||    
T  29144365 gacacttgtaattacactgcattatctatttttttcaaattattagctgtgtcggcgtatcagtgtcagtgtc 29144437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 32461416 - 32461464
Alignment:
Q  30 gattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacac 78  Q
    ||||||| |||| |||||||||||||| |||| ||||||||||||||||    
T  32461416 gattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacac 32461464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 154
Target Start/End: Complemental strand, 6427409 - 6427322
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgt 154  Q
    ||||||| |||| | |||||||| ||||||||||||  || | ||||||||||  |||| | ||| |||||||||||| |||||||||    
T  6427409 cgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgtccgt 6427322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 9033022 - 9033085
Alignment:
Q  82 taattacactgaattatgtgacattttt-aaattattagatgtgtcgacgtatcagtgtccgtg 144  Q
    |||||||||||||||||||||  ||||| ||||||||||  |||| ||||| ||||||||||||    
T  9033022 taattacactgaattatgtgatttttttcaaattattagtggtgttgacgtgtcagtgtccgtg 9033085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 13997940 - 13997869
Alignment:
Q  69 acaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtc 140  Q
    |||||||||| | |||||||||||||||||||||  ||||||||| ||||   |||||| ||| ||||||||    
T  13997940 acaccgacacatataattacactgaattatgtgatttttttaaataattaacggtgtcggcgtgtcagtgtc 13997869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 15323215 - 15323136
Alignment:
Q  74 gacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||||  ||||||||| ||||||||||  |||| |||||||||  ||| ||||| | ||||||||| |||||||||||    
T  15323215 gacacttacaattacactaaattatgtgattttttcaaattattaactgtatcgacatgtcagtgtccatgtcgtgtccg 15323136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Complemental strand, 21621018 - 21620979
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtga 102  Q
    |||||||||||||| ||||||| |||||||||||||||||    
T  21621018 tgtccgacaccgacgcttgtaaatacactgaattatgtga 21620979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 118
Target Start/End: Complemental strand, 52903312 - 52903257
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattatta 118  Q
    |||||||||||||||| | ||||||||||||||||| |||  || |||||||||||    
T  52903312 tgtccgacaccgacacatataattacactgaattatatgattttattaaattatta 52903257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 101
Target Start/End: Complemental strand, 2218298 - 2218264
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtg 101  Q
    ||||||||||||||||||||||||| |||||||||    
T  2218298 cgacaccgacacttgtaattacactaaattatgtg 2218264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 119
Target Start/End: Original strand, 11605897 - 11605987
Alignment:
Q  29 agattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattag 119  Q
    |||||||||||||||| ||||||||||  | || | || || ||| |||| ||||||| ||||||||||| |||  |||| ||||||||||    
T  11605897 agattaggtgtgttccggtgtcagacatgtatcatatctgataccaacacatgtaatttcactgaattatatgattttttcaaattattag 11605987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 119
Target Start/End: Complemental strand, 40181976 - 40181878
Alignment:
Q  21 cactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattag 119  Q
    ||||| || ||||||| |||| || ||||  ||||| |||  ||||||||||||| || | |||||||||||||||||||||  || | ||||||||||    
T  40181976 cactcctcggattaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccgatacatataattacactgaattatgtgattttctcaaattattag 40181878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 100
Target Start/End: Original strand, 30173762 - 30173795
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgt 100  Q
    ||||||||||||||||||||||||||| ||||||    
T  30173762 cgacaccgacacttgtaattacactgagttatgt 30173795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 34298480 - 34298411
Alignment:
Q  82 taattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    |||||||||||||||||||||  || | ||||||||||  ||||||  || ||||| |||||||||||||    
T  34298480 taattacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtc 34298411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 1864876 - 1864940
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcg 127  Q
    ||||| |||||||||| | |||||||||||||||||||||  || | |||||||||  |||||||    
T  1864876 tgtccaacaccgacacatataattacactgaattatgtgattttctcaaattattaactgtgtcg 1864940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 131
Target Start/End: Original strand, 7988447 - 7988515
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgt 131  Q
    ||||||||||| |||||| | |||||| |||||||||| || || |||||||||||   ||||||||||    
T  7988447 tgtccgacaccaacacttatgattacattgaattatgtcactttcttaaattattatcagtgtcgacgt 7988515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 13436521 - 13436465
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattag 119  Q
    ||||||||||| |||| | |||||||||||||||||||||  |  ||||||||||||    
T  13436521 tgtccgacaccaacacatataattacactgaattatgtgatttccttaaattattag 13436465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 153
Target Start/End: Original strand, 15641048 - 15641116
Alignment:
Q  85 ttacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||| ||||||  || ||||||||||||  |||||| | | |||||||||||||| ||||||    
T  15641048 ttacactgaatcatgtgattttcttaaattattagcagtgtcggcatgtcagtgtccgtgtcatgtccg 15641116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 15765871 - 15765827
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacaca 57  Q
    ||||| |||||||||| ||||||| |||| |||||||||||||||    
T  15765871 agcacggacactcttcggattaggcgtgtcccagtgtcagacaca 15765827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 19324606 - 19324550
Alignment:
Q  82 taattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtg 138  Q
    |||||||||||||||||||||  || | ||||||| ||  |||||||||||||||||    
T  19324606 taattacactgaattatgtgattttctcaaattatcagcagtgtcgacgtatcagtg 19324550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 27471567 - 27471667
Alignment:
Q  68 gacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcat 167  Q
    |||||| |||| ||||||||||||||||||||||   || | ||||||||||  || |||  || |||||||  |||||| ||||||||  |||||||||    
T  27471567 gacaccaacacatgtaattacactgaattatgtgcttttctcaaattattagcggtatcggtgtgtcagtgtttgtgtcgcgtccgtatatgtgcttcat 27471666  T
Q  168 a 168  Q
    |    
T  27471667 a 27471667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 29163360 - 29163416
Alignment:
Q  46 gtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtga 102  Q
    ||||||| ||| |||| |||||||||||||||| | |||||| | ||||||||||||    
T  29163360 gtgtcaggcacgtgtcgtgtccgacaccgacacatataattaaattgaattatgtga 29163416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 153
Target Start/End: Original strand, 37055866 - 37055942
Alignment:
Q  77 acttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||||||| |||||||| |  || | ||||||||||  || |||| ||||||||||| ||||| ||||||    
T  37055866 acttgtaattacactaaattatgtaattttctcaaattattagcagtatcgatgtatcagtgtctgtgtcatgtccg 37055942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 2e-33; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 23292932 - 23293072
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| ||||||| || ||||||| |||| || ||||| ||||| |||| ||||||||||||||||||||||||| ||||||||||||||  |||| |||    
T  23292932 agcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgattttttcaaa 23293031  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||||| ||||||| ||| ||| |||||||||||||||||    
T  23293032 ttattagctgtgtcggcgtgtcattgtccgtgtcgtgtccg 23293072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 46 - 168
Target Start/End: Original strand, 12797317 - 12797438
Alignment:
Q  46 gtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgt 145  Q
    ||||||||||  | || ||||||||||||||||||||||||||||||||||||||||  |||| |||||||||| | || || ||| |||||||||||||    
T  12797317 gtgtcagacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgtga-tttttcaaattattagttttgccggcgtgtcagtgtccgtgt 12797415  T
Q  146 cgtgtccgtatccgtgcttcata 168  Q
    ||| |||||||||||||||||||    
T  12797416 cgtatccgtatccgtgcttcata 12797438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 19 - 168
Target Start/End: Complemental strand, 49431133 - 49430983
Alignment:
Q  19 gacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacattttt-aaattatt 117  Q
    ||||||| || ||| ||| |||| || ||||  ||||| |||| |||||||||||||||||| |||||||||||||||||||||  ||||| ||||||||    
T  49431133 gacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacacttttaattacactgaattatgtgatttttttcaaattatt 49431034  T
Q  118 agatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcata 168  Q
    || ||||||| ||| ||| |||||| ||||||||||| |||||||||||||    
T  49431033 agctgtgtcggcgtgtcactgtccgagtcgtgtccgtgtccgtgcttcata 49430983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 21945616 - 21945460
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    |||| |||||||| || ||||||| ||||| | ||||| ||||  |||| |||||||||||||||||||||||||||||||||||||| |  |||| |||    
T  21945616 agcatagacactcctcggattaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaa 21945517  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtcgtgtcc-gtatccgtgcttcata 168  Q
    ||||||| ||||||| | | |||||||| ||||| ||||| || |||||||||||||    
T  21945516 ttattagctgtgtcggcatgtcagtgtctgtgtcatgtccggtgtccgtgcttcata 21945460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 127
Target Start/End: Original strand, 2361921 - 2362035
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| ||||||| |||||||||||||||  | |||||||||||  ||| |||||||||||||||||| |||||||||| |||||||| |  |||| |||    
T  2361921 agcacggacactcgtcagattaggtgtgtctcggtgtcagacacgagtcgtgtccgacaccgacacttttaattacactaaattatgtaattttttcaaa 2362020  T
Q  113 ttattagatgtgtcg 127  Q
    ||||||| |||||||    
T  2362021 ttattagctgtgtcg 2362035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 157
Target Start/End: Original strand, 34306764 - 34306893
Alignment:
Q  27 tcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtc 126  Q
    |||||||||| ||||  | ||||| ||||| |||| |||||||||||||||||||||||||||||  ||||| |||  |||| |||||||||| ||||||    
T  34306764 tcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactacattatctga-tttttcaaattattagttgtgtc 34306862  T
Q  127 gacgtatcagtgtccgtgtcgtgtccgtatc 157  Q
    | |||||||||||| || | |||||||||||    
T  34306863 ggcgtatcagtgtctgtattgtgtccgtatc 34306893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 151
Target Start/End: Complemental strand, 19482727 - 19482643
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    ||||||| |||||||||||||||| ||||||||||| ||||| |||||||||| ||||||| ||| |||||||| ||||||||||    
T  19482727 cgacaccaacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtc 19482643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 11651142 - 11651218
Alignment:
Q  75 acacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    ||||||||| || |||||||||||||||  ||||||||||||||| ||||||||||| ||||||||||| |||||||    
T  11651142 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatcgtgtc 11651218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 27706185 - 27706261
Alignment:
Q  75 acacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    ||||||||||||||||| ||||||||||  ||||||||||||||  ||||||||||| ||||||||| |||||||||    
T  27706185 acacttgtaattacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtccctgtcgtgtc 27706261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 28964200 - 28964300
Alignment:
Q  19 gacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattatta 118  Q
    ||||||| || ||||||| |||| |||||||| || |  |||| |||||||||| |||||||||||||||||||||||||||||  |||| |||||||||    
T  28964200 gacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagacacttgtaattacactgaattatgtgattttttcaaattatta 28964299  T
Q  119 g 119  Q
    |    
T  28964300 g 28964300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 146
Target Start/End: Complemental strand, 30299006 - 30298926
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacattttt-aaattattagatgtgtcgacgtatcagtgtccgtgtc 146  Q
    |||||||||||||||||||||||||||||||||| |  ||||| |||||||||| ||||||| ||| ||||||||||||||    
T  30299006 cgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 30298926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 146
Target Start/End: Complemental strand, 30327874 - 30327794
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacattttt-aaattattagatgtgtcgacgtatcagtgtccgtgtc 146  Q
    |||||||||||||||||||||||||||||||||| |  ||||| |||||||||| ||||||| ||| ||||||||||||||    
T  30327874 cgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 30327794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 52 - 126
Target Start/End: Original strand, 54580008 - 54580082
Alignment:
Q  52 gacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtc 126  Q
    ||||| |||| |||||||||||||||||| |||||||||||||||||||||  |||| |||||||||| ||||||    
T  54580008 gacacgtgtcgtgtccgacaccgacacttataattacactgaattatgtgattttttcaaattattagttgtgtc 54580082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 153
Target Start/End: Original strand, 12895227 - 12895360
Alignment:
Q  20 acactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattag 119  Q
    |||||| || ||||||| |||| ||  |||| || ||||||| |||||||||||||||||| |||||||||  ||||||||||  |||| |||||||||     
T  12895227 acactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacacttataattacacaaaattatgtgattttttcaaattattat 12895326  T
Q  120 atgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
     ||||||| ||| ||| ||| |||||||| ||||    
T  12895327 ttgtgtcggcgtgtcattgttcgtgtcgtatccg 12895360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 35161149 - 35161060
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtga 102  Q
    ||||| |||||| ||| ||||||||||||||| ||||| ||||| |||| |||||||| | || |||| |||||||||||||||||||||    
T  35161149 agcacggacacttttcggattaggtgtgttccggtgtcggacacgtgtcgtgtccgactctgatacttataattacactgaattatgtga 35161060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 154
Target Start/End: Complemental strand, 40481737 - 40481609
Alignment:
Q  30 gattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgaca-----cttgtaattacactgaattatgtgacatttttaaattattagatgtg 124  Q
    ||||| ||||||| | ||||| ||||| |||| ||||| |||||||||     |||||||||||||||||||||||||  |||| |||||||||| |||     
T  40481737 gattaagtgtgtttcggtgtcggacacgtgtcgtgtccaacaccgacataacacttgtaattacactgaattatgtga-tttttcaaattattagttgta 40481639  T
Q  125 tcgacgtatcagtgtccgtgtcgtgtccgt 154  Q
    ||| ||| |||||||| |||||||||||||    
T  40481638 tcggcgtgtcagtgtcagtgtcgtgtccgt 40481609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 160
Target Start/End: Original strand, 3947707 - 3947859
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacacc-----gacacttgtaattacactgaattatgtgacattt 107  Q
    ||||| ||||||| || |||||||||||| |  ||||| ||||| |||| ||||||||||      |||||||||||||||||||||||||| ||  |||    
T  3947707 agcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgcgattttt 3947806  T
Q  108 ttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgt 160  Q
    | |||||||||| ||||||| | | || ||||| |||| |||||||| |||||    
T  3947807 tcaaattattagctgtgtcggcatgtccgtgtctgtgtggtgtccgtgtccgt 3947859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 35157931 - 35158071
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| ||||||  || ||||| | ||||||| ||||  ||||  |||| |||| ||||||||||||| |||||||||| ||||||||||  |||  |||    
T  35157931 agcacggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgacacttataattacactaaattatgtgatttttccaaa 35158030  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||||| || |||| ||| ||||||||||||| |||||||    
T  35158031 ttattagttgcgtcggcgtgtcagtgtccgtgttgtgtccg 35158071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 38846972 - 38847072
Alignment:
Q  27 tcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtc 126  Q
    ||||||||||| |||||  ||||| ||||| |||| | |||||||| |||||||||||||||||||||| || |||  |||| |||||||||| ||||||    
T  38846972 tcagattaggtatgttctggtgtcggacacgtgtcgtatccgacactgacacttgtaattacactgaataatatgattttttcaaattattagctgtgtc 38847071  T
Q  127 g 127  Q
    |    
T  38847072 g 38847072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 22440615 - 22440701
Alignment:
Q  82 taattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcata 168  Q
    |||||||||||||||||||||  || | |||||||||   ||||||| |||||||||||| ||||||||| ||||||||| ||||||    
T  22440615 taattacactgaattatgtgattttctcaaattattaacggtgtcgatgtatcagtgtccatgtcgtgtctgtatccgtgtttcata 22440701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 4157262 - 4157150
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||||||||||| ||  ||||||||| |  | ||||| ||||  |||| |||||||||||||||||||||||| |||| ||||||||||  |||| |||    
T  4157262 agcacagacactcctcgaattaggtgtttctcggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtga-tttttcaaa 4157164  T
Q  113 ttattagatgtgtc 126  Q
    ||||||| ||||||    
T  4157163 ttattagttgtgtc 4157150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 67 - 140
Target Start/End: Original strand, 11596352 - 11596425
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtc 140  Q
    ||||||| ||||||||||||||||||||||||||||  |||| |||||||||| | ||| | ||||||||||||    
T  11596352 cgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctttgttggcgtatcagtgtc 11596425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 29205512 - 29205451
Alignment:
Q  58 tgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattag 119  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||  |||| ||||||||||    
T  29205512 tgtcgtgtccaacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 29205451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 4383426 - 4383351
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgt 143  Q
    |||||| |||| ||||||||||||||||||||||||  |||| |||||||||| ||| ||||||| |||||||||||    
T  4383426 cgacactgacatttgtaattacactgaattatgtga-tttttcaaattattagttgtatcgacgtgtcagtgtccgt 4383351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 28084581 - 28084494
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacattttt-aaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||| |||||||||||||||| ||||||||||||  ||||| ||||| |||| ||||||| ||| |||| ||| ||||||||||||    
T  28084581 cgacacagacacttgtaattacattgaattatgtgatttttttcaaattcttagctgtgtcggcgtgtcagcgtctgtgtcgtgtccg 28084494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 102
Target Start/End: Complemental strand, 42640592 - 42640553
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtga 102  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  42640592 tgtccgacaccgacacttgtaattacactgaattatgtga 42640553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 127
Target Start/End: Original strand, 715551 - 715668
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtcc--gacaccgacacttgtaattacactgaattatgtga-cattttt 109  Q
    ||||| ||||||| || ||||||| |||| || ||||| ||||  |||| ||| |  |||||| ||||||||||||||||||||||||||||   |||||    
T  715551 agcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgatttttttt 715650  T
Q  110 aaattattagatgtgtcg 127  Q
    |||||||||| |||||||    
T  715651 aaattattagctgtgtcg 715668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 127
Target Start/End: Original strand, 752877 - 752994
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtcc--gacaccgacacttgtaattacactgaattatgtga-cattttt 109  Q
    ||||| ||||||| || ||||||| |||| || ||||| ||||  |||| ||| |  |||||| ||||||||||||||||||||||||||||   |||||    
T  752877 agcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgatttttttt 752976  T
Q  110 aaattattagatgtgtcg 127  Q
    |||||||||| |||||||    
T  752977 aaattattagctgtgtcg 752994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 8423681 - 8423770
Alignment:
Q  30 gattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattag 119  Q
    ||||||| |||| || ||||| ||||  |||| ||||||||||||||| || |||||||||||||||||||||  || | ||||||||||    
T  8423681 gattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgacatttataattacactgaattatgtgattttctcaaattattag 8423770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 9996936 - 9996864
Alignment:
Q  30 gattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtga 102  Q
    ||||||||||||||||||||| ||||| |||  |||| |||||||| || | |||||| ||||||||||||||    
T  9996936 gattaggtgtgttccagtgtcggacacgtgttatgtctgacaccgagacatataattatactgaattatgtga 9996864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 63 - 99
Target Start/End: Complemental strand, 16073457 - 16073421
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatg 99  Q
    |||||||||||||||||||||||||||||||||||||    
T  16073457 tgtccgacaccgacacttgtaattacactgaattatg 16073421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 151
Target Start/End: Complemental strand, 20633535 - 20633460
Alignment:
Q  73 cgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    ||||||||||||||||| ||||||||||    |||| ||||||||||  |||||||||| ||||||||||| |||||||    
T  20633535 cgacacttgtaattacattgaattatgtt---ttttcaaattattagcggtgtcgacgtgtcagtgtccgtatcgtgtc 20633460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 40179627 - 40179715
Alignment:
Q  58 tgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtc 146  Q
    |||| |||||||||||||| | | |||||||||||||||||||||  |||| ||| |||||   ||||| |||| ||||||||||||||    
T  40179627 tgtcgtgtccgacaccgacgcatataattacactgaattatgtgattttttcaaactattaatggtgtcaacgtgtcagtgtccgtgtc 40179715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 102
Target Start/End: Original strand, 6879461 - 6879500
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtga 102  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  6879461 tgtccgacaccgacacttgtaattacacttaattatgtga 6879500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 146
Target Start/End: Original strand, 12895116 - 12895194
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtc 146  Q
    ||||||||||||||||||||||  ||||||||||||  |||| |||||||||| ||| ||| ||| || |||||||||||    
T  12895116 cgacaccgacacttgtaattactttgaattatgtgattttttcaaattattagctgtttcggcgtgtc-gtgtccgtgtc 12895194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 24613702 - 24613765
Alignment:
Q  68 gacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgt 131  Q
    |||||||||||||||| ||||| ||||||||||||  || | |||||||||| |||||||||||    
T  24613702 gacaccgacacttgtacttacattgaattatgtgattttctcaaattattagttgtgtcgacgt 24613765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 152
Target Start/End: Original strand, 14126118 - 14126196
Alignment:
Q  74 gacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtcc 152  Q
    ||||||| |||||||||||||||||||||| || | |||||||||   |||||| ||| | |||||| |||||||||||    
T  14126118 gacacttataattacactgaattatgtgactttatcaaattattaacagtgtcggcgtgttagtgtctgtgtcgtgtcc 14126196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 140
Target Start/End: Complemental strand, 15029825 - 15029751
Alignment:
Q  66 ccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtc 140  Q
    |||||||| |||| | ||||||||||||||||||||| ||||| ||||||||||  |||||  ||| ||||||||    
T  15029825 ccgacaccaacacatataattacactgaattatgtgatattttcaaattattagcagtgtctgcgtgtcagtgtc 15029751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 168
Target Start/End: Complemental strand, 24544038 - 24543943
Alignment:
Q  70 caccgacacttgtaattacactgaattatgtg-acatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcata 168  Q
    |||||||||||||||||||| || |||| ||| |  ||||||||||||||| ||||||| ||| ||||||||    | |||||||||||| |||||||||    
T  24544038 caccgacacttgtaattacaatgcattaagtgtatttttttaaattattagttgtgtcggcgtgtcagtgtc----tggtgtccgtatccatgcttcata 24543943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 6485613 - 6485662
Alignment:
Q  69 acaccgacacttgtaattacactgaattatgtgacatttttaaattatta 118  Q
    ||||||||||||||||||||||| ||||||||||  |||| |||||||||    
T  6485613 acaccgacacttgtaattacactaaattatgtgattttttcaaattatta 6485662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 152
Target Start/End: Original strand, 16303266 - 16303351
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtcc 152  Q
    ||||||||||||||||||||||||| |||||| | |  |||| ||| |||||  | ||||| ||| ||||||||||| ||||||||    
T  16303266 cgacaccgacacttgtaattacactaaattatatcattttttcaaaatattatctttgtcggcgtgtcagtgtccgtatcgtgtcc 16303351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 168
Target Start/End: Complemental strand, 50280942 - 50280839
Alignment:
Q  67 cgacaccgacacttgtaatt--acactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtg-tcgtgtccgtatccgtgct 163  Q
    |||||||| |||||||||||  ||||| ||||||||||  |||| |||||||||| ||||||| ||| || |||| |||| | ||||||||||||||| |    
T  50280942 cgacaccggcacttgtaattacacacttaattatgtgaatttttcaaattattagctgtgtcggcgtgtccgtgt-cgtgttagtgtccgtatccgtgtt 50280844  T
Q  164 tcata 168  Q
    |||||    
T  50280843 tcata 50280839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 4157504 - 4157460
Alignment:
Q  58 tgtcttgtccgacaccgacacttgtaattacactgaattatgtga 102  Q
    |||| |||||||||||||||||||||||| |||| ||||||||||    
T  4157504 tgtcgtgtccgacaccgacacttgtaattgcactaaattatgtga 4157460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 151
Target Start/End: Complemental strand, 30838269 - 30838185
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    ||||||||| |||| |||||||||| |||||| | |  || | ||||||||||  || |||||||||||||||||||| ||||||    
T  30838269 cgacaccgatacttataattacactaaattatataattttatcaaattattagcagtatcgacgtatcagtgtccgtgccgtgtc 30838185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 146
Target Start/End: Original strand, 26504303 - 26504378
Alignment:
Q  71 accgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtc 146  Q
    |||||||| | ||||||||||||| ||| |||  || ||||||||||||  ||||||| || ||||||||||||||    
T  26504303 accgacacatataattacactgaactatttgattttcttaaattattagcagtgtcgatgtttcagtgtccgtgtc 26504378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 28000743 - 28000794
Alignment:
Q  68 gacaccgacacttgtaattacactgaattatgtga-catttttaaattatta 118  Q
    ||||||||||||||||||||||||||||||| |||  ||||| |||||||||    
T  28000743 gacaccgacacttgtaattacactgaattatatgattattttaaaattatta 28000794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 36635368 - 36635297
Alignment:
Q  82 taattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||||||||||||  || | ||||||||||  |||| | ||| |||||||||| ||||||||||    
T  36635368 taattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccg 36635297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 101
Target Start/End: Original strand, 482234 - 482272
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtg 101  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  482234 tgtccgacaccgacagttataattacactgaattatgtg 482272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 12324033 - 12323967
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacact 79  Q
    ||||| ||||||| || ||| ||||||||||| ||| || |||| |||| |||||||||||||||||    
T  12324033 agcacggacactcctcggataaggtgtgttcccgtgccacacacgtgtcatgtccgacaccgacact 12323967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 151
Target Start/End: Complemental strand, 12708206 - 12708121
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacattttt---aaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    ||||| |||||||||||||||||||||||||| |  |||||||   |||||||||| ||||||  ||| |||||||| | ||||||||    
T  12708206 cgacatcgacacttgtaattacactgaattattt--cattttttaaaaattattagttgtgtctgcgtgtcagtgtctgcgtcgtgtc 12708121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 13307957 - 13307903
Alignment:
Q  46 gtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgt 100  Q
    ||||| ||||| |||| ||||||||||| |||||||| |||||| ||||||||||    
T  13307957 gtgtctgacacgtgtcgtgtccgacaccaacacttgtgattacattgaattatgt 13307903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 152
Target Start/End: Original strand, 31800457 - 31800563
Alignment:
Q  46 gtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgt 145  Q
    ||||||||||  |||| ||| ||| ||||||||||||||||||| | |||||| | |  |||| |||||||||| |||||||  || || |||| |||||    
T  31800457 gtgtcagacatctgtcgtgtacgataccgacacttgtaattacattaaattatttaattttttaaaattattagctgtgtcggtgtgtcggtgttcgtgt 31800556  T
Q  146 cgtgtcc 152  Q
    | |||||    
T  31800557 catgtcc 31800563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 153
Target Start/End: Complemental strand, 848009 - 847924
Alignment:
Q  68 gacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||||||||||| | |||||||||| |  || | ||||||||||  |  ||| ||| |||||||| ||||||||||||    
T  848009 gacaccgacacttgtaattatagtgaattatgtaattttctcaaattattagcggcatcggcgtgtcagtgtctgtgtcgtgtccg 847924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 4136280 - 4136321
Alignment:
Q  20 acactcttcagattaggtgtgttccagtgtcagacacatgtc 61  Q
    ||||||||||||||| |||||| | |||||||||||||||||    
T  4136280 acactcttcagattaagtgtgtcctagtgtcagacacatgtc 4136321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 28720924 - 28720848
Alignment:
Q  77 acttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgt 154  Q
    ||||||| |||||||| ||||| |||  |||| |||||||||| ||||||| | | ||||||| ||||||||||||||    
T  28720924 acttgtagttacactgcattatatgat-ttttcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtgtccgt 28720848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 167
Target Start/End: Original strand, 35723384 - 35723484
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacattttt-aaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttc 165  Q
    |||||| ||||| | |||||||| |||||||||||   ||| | ||||||||||  |||||| ||| ||||||||  ||||||||||||||| |||||||    
T  35723384 cgacactgacacatataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtcagtgtca-tgtcgtgtccgtatcggtgcttc 35723482  T
Q  166 at 167  Q
    ||    
T  35723483 at 35723484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 170
Target Start/End: Complemental strand, 30094025 - 30093997
Alignment:
Q  142 gtgtcgtgtccgtatccgtgcttcatact 170  Q
    |||||||||||||||||||||||||||||    
T  30094025 gtgtcgtgtccgtatccgtgcttcatact 30093997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 1e-32; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 18840959 - 18841114
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| ||||||| || |||||||||||| || ||||| ||||  |||| |||| |||||||||||||||||||||||| |||||||| |  |||| |||    
T  18840959 agcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacacttaattatgtaattttttcaaa 18841058  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcata 168  Q
    ||||||| ||||||  ||| ||||||||| |||||||||||||| |||||||||||    
T  18841059 ttattagttgtgtcagcgtgtcagtgtccatgtcgtgtccgtatacgtgcttcata 18841114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 58 - 168
Target Start/End: Original strand, 30404841 - 30404951
Alignment:
Q  58 tgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatc 157  Q
    |||| |||||||| |||||||||||||||||||||||||||||||  |||| |||||||||   |||||| ||| |||||||||||||| ||||||||||    
T  30404841 tgtcgtgtccgacgccgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtcatgtccgtatc 30404940  T
Q  158 cgtgcttcata 168  Q
    |||||||||||    
T  30404941 cgtgcttcata 30404951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 13 - 148
Target Start/End: Complemental strand, 15972986 - 15972851
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| |||| ||||| |||||||||||| || | ||| ||||| |||| |||||||||||||||||||||||||||||||||| ||| |  |||| |||    
T  15972986 agcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattgtgtaattttttcaaa 15972887  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtcgt 148  Q
    ||||||  ||||||| ||| ||||||||||||||||    
T  15972886 ttattaattgtgtcggcgtgtcagtgtccgtgtcgt 15972851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 18422022 - 18421936
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||| ||| |||||||||||||||| ||||    
T  18422022 cgacaccgacacttgtaattacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtcagtgtccgtgtcgtatccg 18421936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 153
Target Start/End: Original strand, 19536393 - 19536484
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacattttt-aaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||| ||||||| ||| ||| |||||||||||||||||    
T  19536393 tgtccgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccg 19536484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 37559090 - 37558940
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| ||||||| || ||||| | |||| || ||||| ||||| ||||  |||||||||||||||||||||||||| ||||||||||||  |||  |||    
T  37559090 agcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacacttgtaattacattgaattatgtgatttttacaaa 37558991  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcata 168  Q
    ||||||| ||||||| ||| ||||||||||     |||||||||||||||||||||    
T  37558990 ttattagctgtgtcggcgtgtcagtgtccg-----tgtccgtatccgtgcttcata 37558940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 38117105 - 38117261
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| ||||| | || ||||||| |||| || ||||| ||||| |||  ||||||||||| |||||||||||||||| ||| |||||||  |||| |||    
T  38117105 agcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacacttgtaattacaccgaagtatgtgattttttcaaa 38117204  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtc--gtgtccgtatccgtgcttcata 168  Q
    ||||||| ||||||| ||| ||||||| ||||||  ||||||||||||||||||||||    
T  38117205 ttattagctgtgtcggcgtgtcagtgt-cgtgtccggtgtccgtatccgtgcttcata 38117261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 2438665 - 2438778
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| ||||||| || ||||||| |||| || ||||| ||||  |||| ||||||||||||||||||||||||||||||||||||||||  |||| |||    
T  2438665 agcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttgaaa 2438764  T
Q  113 ttattagatgtgtc 126  Q
    ||||||| ||||||    
T  2438765 ttattagctgtgtc 2438778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 152
Target Start/End: Original strand, 20539674 - 20539759
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtcc 152  Q
    ||||||||||||||||||||||||| |||||| |||  |||| |||||||||| ||||||||||| ||||||||||||||||||||    
T  20539674 cgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtcc 20539759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 154
Target Start/End: Complemental strand, 28596582 - 28596444
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| ||||||| || ||||||| |||| | |||||| ||||| |||| |||||||||||||||||| |||||||||||| ||||||||  ||||| |     
T  28596582 agcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgacttatgtgatgtttttca- 28596484  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgt 154  Q
      ||||| ||||||| ||| ||| ||||||||||||||||||    
T  28596483 --attagctgtgtcggcgtgtcattgtccgtgtcgtgtccgt 28596444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 151
Target Start/End: Original strand, 20242673 - 20242811
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    |||||||||||||||| ||| ||| |||| |  ||||||||||| |||  |||||||||||||||| | |||||||||||||||||||||  || | |||    
T  20242673 agcacagacactcttcggataaggcgtgtcctcgtgtcagacacgtgttgtgtccgacaccgacacatataattacactgaattatgtgattttctaaaa 20242772  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
      ||||| ||||||| ||| ||||||||| |||||||||    
T  20242773 aaattagttgtgtcggcgtgtcagtgtccatgtcgtgtc 20242811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 148
Target Start/End: Complemental strand, 6940329 - 6940233
Alignment:
Q  52 gacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgt 148  Q
    ||||| |||| |||| || ||||||||||||||||||||| |||||||| || |||| |||||||||| ||||||| ||| ||||||||||||||||    
T  6940329 gacacgtgtcgtgtcggataccgacacttgtaattacacttaattatgtaactttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgt 6940233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 12940941 - 12941029
Alignment:
Q  73 cgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtg 161  Q
    ||||| |||||||||||||||||||| |||  |||| |||||||||| |||||| |||| ||||||||||||||||||| |||||||||    
T  12940941 cgacatttgtaattacactgaattatatgattttttcaaattattagttgtgtcaacgtgtcagtgtccgtgtcgtgtctgtatccgtg 12941029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 154
Target Start/End: Complemental strand, 21091836 - 21091695
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| |||||||||| || ||||||||| || ||||| ||||  || |||||| ||||| ||||||||||||||||||||| ||||| |  || |||||    
T  21091836 agcacggacactcttcggaataggtgtgtcccggtgtccgacaggtggcttgtctgacactgacacttgtaattacactgaagtatgttattttcttaaa 21091737  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgt 154  Q
    |||||||  ||||||  || ||||||||||| | ||||||||    
T  21091736 ttattagcggtgtcggtgtgtcagtgtccgtcttgtgtccgt 21091695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 63 - 147
Target Start/End: Complemental strand, 20473385 - 20473301
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcg 147  Q
    ||||||||| |||||||||||||||||||||||||| |||  ||||||||||||||| ||||||| | | |||||||| ||||||    
T  20473385 tgtccgacatcgacacttgtaattacactgaattatatgagttttttaaattattagttgtgtcggcatgtcagtgtctgtgtcg 20473301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 63 - 150
Target Start/End: Complemental strand, 21624330 - 21624242
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacattttt-aaattattagatgtgtcgacgtatcagtgtccgtgtcgtgt 150  Q
    |||||||||||||||||||||||||||||||||||||  |  ||||| |||||||||| ||||||| ||| |||||||| |||||||||    
T  21624330 tgtccgacaccgacacttgtaattacactgaattatgctatttttttaaaattattagctgtgtcggcgtgtcagtgtctgtgtcgtgt 21624242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 15657923 - 15657837
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||| ||||||||||||||||||||||||  |||  |||||||||| || |||| ||| | |||||||||||||||||||    
T  15657923 cgacaccgacatttgtaattacactgaattatgtgatttttacaaattattagttgagtcggcgtgttagtgtccgtgtcgtgtccg 15657837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 36756344 - 36756430
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||||| ||||||||||||||||||| |  | || |||||||||| ||||||||||| |||||||| ||||||| ||||    
T  36756344 cgacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtgtctgtgtcgtatccg 36756430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 154
Target Start/End: Complemental strand, 23718118 - 23717998
Alignment:
Q  27 tcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtc 126  Q
    ||||||||||||| | ||||||||||||||||       ||| ||||||||| | |||||||||||||||||||||| || | ||||||||||  |||||    
T  23718118 tcagattaggtgtttcccagtgtcagacacat-------ccgtcaccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtc 23718026  T
Q  127 gacgtatcagtgtccgtgtcgtgtccgt 154  Q
    |  || |||||||||||||| |||||||    
T  23718025 ggtgtgtcagtgtccgtgtcatgtccgt 23717998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 154
Target Start/End: Complemental strand, 24105790 - 24105670
Alignment:
Q  27 tcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtc 126  Q
    ||||||||||||| | ||||||||||||||||       ||| ||||||||| | |||||||||||||||||||||| || | ||||||||||  |||||    
T  24105790 tcagattaggtgtttcccagtgtcagacacat-------ccgtcaccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtc 24105698  T
Q  127 gacgtatcagtgtccgtgtcgtgtccgt 154  Q
    |  || |||||||||||||| |||||||    
T  24105697 ggtgtgtcagtgtccgtgtcatgtccgt 24105670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 12224336 - 12224178
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacattttt--a 110  Q
    |||||| |||||| |  ||||||| |||| |||||||| ||||| | || ||||||||||||||||||||||||||| || |||||| ||  |||||  |    
T  12224336 agcacaaacactccttggattaggcgtgtcccagtgtcggacacgtatcgtgtccgacaccgacacttgtaattacattggattatgggattttttttca 12224237  T
Q  111 aattattagatgtgtcgacgtatcagtgtccgtgtcgtg-tccgtatccgtgcttcata 168  Q
    ||||||||| | ||| | ||| ||| |||  |||||||| || ||||||||||||||||    
T  12224236 aattattagctatgttggcgtgtcaatgtttgtgtcgtgttcggtatccgtgcttcata 12224178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 5040808 - 5040758
Alignment:
Q  52 gacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtga 102  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  5040808 gacacatgtcgtgtccgacaccgacacttgtaattacattgaattatgtga 5040758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 14996171 - 14996308
Alignment:
Q  19 gacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgaca-----ccgacacttgtaattacactgaattatgtgacattttt-aaa 112  Q
    ||||||| || ||||||| ||||||| ||||||||||| ||| | ||||||||     |||||||||||||||||||| |||||| |||  ||||| |||    
T  14996171 gacactcctcggattaggcgtgttccggtgtcagacacgtgtgt-gtccgacaagacaccgacacttgtaattacactaaattatatgatttttttcaaa 14996269  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    ||||||| ||||||| | | |||||||||||||| ||||    
T  14996270 ttattagctgtgtcggcttgtcagtgtccgtgtcatgtc 14996308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 145
Target Start/End: Complemental strand, 24894440 - 24894370
Alignment:
Q  75 acacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgt 145  Q
    |||||| ||||| |||||||||||||||  ||||||||||||||| ||||||| ||| |||||||||||||    
T  24894440 acacttttaattgcactgaattatgtgatttttttaaattattagctgtgtcggcgtgtcagtgtccgtgt 24894370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 74 - 160
Target Start/End: Original strand, 21374706 - 21374794
Alignment:
Q  74 gacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtc--gtgtccgtatccgt 160  Q
    ||||||||||||||||||||||||||| |  |||| |||||||||| ||||||| ||| | ||||||||||||  |||||||| |||||    
T  21374706 gacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtccggtgtccgtgtccgt 21374794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 67 - 151
Target Start/End: Original strand, 23058442 - 23058527
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacattttt-aaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    |||||||||||||||||||||||||| |||||||||  ||||| |||||||||  ||||| | ||| ||| |||||||||||||||    
T  23058442 cgacaccgacacttgtaattacactggattatgtgatttttttcaaattattaattgtgtgggcgtgtcactgtccgtgtcgtgtc 23058527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 974806 - 974746
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcg 127  Q
    ||||||||||||||||||||||||||||| ||||||  |||| |||||||||| |||||||    
T  974806 cgacaccgacacttgtaattacactgaataatgtgatcttttcaaattattagttgtgtcg 974746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 29176456 - 29176544
Alignment:
Q  30 gattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattatta 118  Q
    ||||||||||||  ||||||| ||||  || | ||||| ||||| |||||| |||||||||||||||||||||| |||| |||||||||    
T  29176456 gattaggtgtgtctcagtgtcggacatgtgccgtgtccaacaccaacacttataattacactgaattatgtgaccttttcaaattatta 29176544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 151
Target Start/End: Complemental strand, 30335476 - 30335392
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    ||||||||||| ||||||||||||| |||||||| |  |||| |||||||||| ||||||| |||   |||||||||||||||||    
T  30335476 cgacaccgacatttgtaattacactaaattatgtcattttttcaaattattagttgtgtcggcgtgctagtgtccgtgtcgtgtc 30335392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 147
Target Start/End: Original strand, 30717530 - 30717610
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcg 147  Q
    ||||| ||||||||||||||||||||||||||||||  |||| |||||||||| | |||||   | |||||||||||||||    
T  30717530 cgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctttgtcggtttgtcagtgtccgtgtcg 30717610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 33153483 - 33153427
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgt 123  Q
    |||||| |||||||||||||||||||||||||||||  ||||||||| |||||||||    
T  33153483 cgacacggacacttgtaattacactgaattatgtgatttttttaaatcattagatgt 33153427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 168
Target Start/End: Complemental strand, 37419802 - 37419705
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttca 166  Q
    |||||||| ||||||||||||||||||||| |||||  |||| |||||||| |   ||||| ||| ||||||||||    ||||||||||||||||||||    
T  37419802 cgacaccggcacttgtaattacactgaattttgtgattttttcaaattatttgccatgtcggcgtgtcagtgtccg----gtgtccgtatccgtgcttca 37419707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 146
Target Start/End: Complemental strand, 39323316 - 39323244
Alignment:
Q  74 gacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtc 146  Q
    ||||||||||||||||||||||||||| |  || | ||||||||||  |||||||||| ||||||||||||||    
T  39323316 gacacttgtaattacactgaattatgtaattttgtcaaattattagcggtgtcgacgtttcagtgtccgtgtc 39323244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 27286307 - 27286393
Alignment:
Q  82 taattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcata 168  Q
    |||||||||| ||||||||||  || | ||||||||||   ||||| ||||||||||||||| ||||||| || |||||||||||||    
T  27286307 taattacacttaattatgtgatcttatcaaattattagcgttgtcggcgtatcagtgtccgtatcgtgtctgtgtccgtgcttcata 27286393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 160
Target Start/End: Original strand, 11223864 - 11223956
Alignment:
Q  68 gacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgt 160  Q
    ||||||||||||||||||||||||||||||||| |  |||| ||| |||||| ||||||  ||| || |||||| |||| |||| || |||||    
T  11223864 gacaccgacacttgtaattacactgaattatgttattttttcaaaatattagctgtgtcagcgtgtctgtgtccatgtcatgtctgtgtccgt 11223956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 18255976 - 18256031
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattatta 118  Q
    |||||||||||||||||| |||||||| | ||||||||||  ||||||||||||||    
T  18255976 tgtccgacaccgacacttctaattacattaaattatgtgatttttttaaattatta 18256031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 12668423 - 12668493
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagt 137  Q
    |||||||||||||| ||||||||||||||||||| |  |||| |||||||||| | ||||| ||| |||||    
T  12668423 cgacaccgacacttataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgtcagt 12668493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 36409642 - 36409728
Alignment:
Q  82 taattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcata 168  Q
    |||||||||| ||||||||||  |||| ||||||| ||  |||||| | | | ||| ||||||||||||| ||||||||||||||||    
T  36409642 taattacactaaattatgtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtgtctgtatccgtgcttcata 36409728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 21616806 - 21616737
Alignment:
Q  82 taattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    |||||||||||||||||||||  || | ||||||||||  |||||| ||| || ||||||||||||||||    
T  21616806 taattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtc 21616737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 35056992 - 35056927
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacac 78  Q
    ||||| ||||||| |||||||||| ||||| | ||||| ||||| |||| ||||||||||||||||    
T  35056992 agcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacac 35056927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 5367260 - 5367216
Alignment:
Q  58 tgtcttgtccgacaccgacacttgtaattacactgaattatgtga 102  Q
    |||| |||||||||||||||| | |||||||||||||||||||||    
T  5367260 tgtcgtgtccgacaccgacacatataattacactgaattatgtga 5367216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 146
Target Start/End: Original strand, 16069269 - 16069333
Alignment:
Q  82 taattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtc 146  Q
    ||||||||||||||||| |||  ||||||||||||||   |||||| ||| ||||||||||||||    
T  16069269 taattacactgaattatatgatttttttaaattattaacggtgtcggcgtgtcagtgtccgtgtc 16069333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 26769569 - 26769497
Alignment:
Q  68 gacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtc 140  Q
    |||||||||||||||||||||||   || |||||| ||||| |||||||||| ||||||| ||| || |||||    
T  26769569 gacaccgacacttgtaattacaccagataatgtgatattttcaaattattagttgtgtcggcgtgtctgtgtc 26769497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 151
Target Start/End: Original strand, 34784982 - 34785066
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    |||||||||||| | |||||||||| ||||||||||  || | |||  ||||| |||||||  || |||||||||||||||||||    
T  34784982 cgacaccgacacatataattacactaaattatgtgattttctaaaaaaattagttgtgtcggtgtgtcagtgtccgtgtcgtgtc 34785066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 102
Target Start/End: Complemental strand, 44635558 - 44635522
Alignment:
Q  66 ccgacaccgacacttgtaattacactgaattatgtga 102  Q
    |||||||||||||||||||||||||||||||| ||||    
T  44635558 ccgacaccgacacttgtaattacactgaattacgtga 44635522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 168
Target Start/End: Complemental strand, 6290178 - 6290115
Alignment:
Q  105 tttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcata 168  Q
    |||||||||||||||  ||| ||||||  |||||| ||||||||||| |||| |||||||||||    
T  6290178 tttttaaattattagcggtgccgacgtgccagtgttcgtgtcgtgtctgtattcgtgcttcata 6290115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 98
Target Start/End: Complemental strand, 27460100 - 27460065
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattat 98  Q
    |||||||||||||| |||||||||||||||||||||    
T  27460100 tgtccgacaccgacccttgtaattacactgaattat 27460065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 19942372 - 19942314
Alignment:
Q  19 gacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgaca 77  Q
    ||||||| || ||||||| |||| || |||||||||||||| | |||||||||||||||    
T  19942372 gacactcctcggattaggcgtgtcccggtgtcagacacatgccgtgtccgacaccgaca 19942314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 152
Target Start/End: Original strand, 21782833 - 21782903
Alignment:
Q  82 taattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtcc 152  Q
    |||||||||||||||||||||  || | ||||||||||  |||||| ||| |||||||  |||||||||||    
T  21782833 taattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgtcc 21782903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 153
Target Start/End: Complemental strand, 31018653 - 31018563
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||||||| | |||||||||| ||| ||||||  || | ||||||||||  |||| | ||| ||||||||| |||||| ||||    
T  31018653 tgtccgacaccgacacctataattacactaaatcatgtgattttctgaaattattagcggtgttggcgtgtcagtgtccatgtcgtatccg 31018563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 37411190 - 37411296
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||||| ||||| || || |||| |||| |||||||| |||||  ||| ||| ||||| |||||| | |||| ||||||||||||||||  || | |||    
T  37411190 agcacaggcactcctcggactaggcgtgtcccagtgtcggacacgcgtcgtgttcgacatcgacacatataatcacactgaattatgtgattttctcaaa 37411289  T
Q  113 ttattag 119  Q
    |||||||    
T  37411290 ttattag 37411296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 38442366 - 38442289
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgt 145  Q
    |||||||||||||| |||||| | ||||||||||||  ||||||||| ||||| |||| || ||| ||||||| |||||    
T  38442366 cgacaccgacacttataattatattgaattatgtgatttttttaaatcattagttgtgccg-cgtgtcagtgttcgtgt 38442289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 43585984 - 43586038
Alignment:
Q  46 gtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgt 100  Q
    ||||| ||||| | || |||||||||||||||||||| |||||| ||||||||||    
T  43585984 gtgtctgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgt 43586038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 153
Target Start/End: Complemental strand, 18276579 - 18276494
Alignment:
Q  68 gacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||   |||||||||||||||| ||||  || | ||||||||||  |||||| | |||||||||| || |||||||||    
T  18276579 gacaccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccg 18276494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 28412394 - 28412325
Alignment:
Q  82 taattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    |||||||||||||||||||||  || | |||||||||   |||| ||||| | |||||||||||||||||    
T  28412394 taattacactgaattatgtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtcgtgtc 28412325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 154
Target Start/End: Complemental strand, 28677953 - 28677880
Alignment:
Q  82 taattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtc-gtgtccgt 154  Q
    |||||||||||||||||||||  |||| ||||||||||  |||||| |||  ||||||| ||||| ||||||||    
T  28677953 taattacactgaattatgtgattttttcaaattattagcggtgtcggcgttccagtgtcagtgtcagtgtccgt 28677880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 100
Target Start/End: Complemental strand, 33884110 - 33884077
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgt 100  Q
    ||||||||||||||||||||||||||||| ||||    
T  33884110 cgacaccgacacttgtaattacactgaatcatgt 33884077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 18622665 - 18622613
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattag 119  Q
    ||||||| |||| | |||||||||||||||||||||  || ||||||||||||    
T  18622665 cgacaccaacacgtataattacactgaattatgtgattttattaaattattag 18622613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 168
Target Start/End: Complemental strand, 24009294 - 24009266
Alignment:
Q  140 ccgtgtcgtgtccgtatccgtgcttcata 168  Q
    |||||||||||||||||||||||||||||    
T  24009294 ccgtgtcgtgtccgtatccgtgcttcata 24009266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 34691801 - 34691857
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattag 119  Q
    |||||||||||||||| | ||||||||||||||||| |||  || | ||||||||||    
T  34691801 tgtccgacaccgacacatataattacactgaattatatgattttatcaaattattag 34691857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 34714213 - 34714269
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattag 119  Q
    |||||||||||||||| | ||||||||||||||||| |||  || | ||||||||||    
T  34714213 tgtccgacaccgacacatataattacactgaattatatgattttatcaaattattag 34714269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 150
Target Start/End: Original strand, 408 - 545
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| ||||||| || |||||||||||| || ||||| |||||  ||| |||||||||||||||||||||||||||||||||| |||||  |||| |||    
T  408 agcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaa 507  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtcgtgt 150  Q
    |||||||  |||||| |||||||||||||||| |||||    
T  508 ttattagcagtgtcggcgtatcagtgtccgtggcgtgt 545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 4e-29; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 63 - 168
Target Start/End: Complemental strand, 20873132 - 20873027
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgc 162  Q
    ||||||||||||||||||||||||||||| ||||||||||  |||| |||||||||  | ||||| ||| |||||||||||||||||||||||| |||||    
T  20873132 tgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgtgtccgtattcgtgc 20873033  T
Q  163 ttcata 168  Q
    ||||||    
T  20873032 ttcata 20873027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 36450700 - 36450850
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||||||||||| || ||||||| |||| |  ||||| |||||  ||| ||||||||||| |||||||||||||||||||||| |||||  |||| |||    
T  36450700 agcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacacttgtaattacactgaattctgtgattttttcaaa 36450799  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcata 168  Q
    ||||||| ||||||| ||| ||||||||     |||||||||||||||||||||||    
T  36450800 ttattagttgtgtcggcgtgtcagtgtc-----cgtgtccgtatccgtgcttcata 36450850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 22596056 - 22595951
Alignment:
Q  64 gtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtc--gtgtccgtatccgtg 161  Q
    |||||||||| |||||||||||||||||||||||||| |  ||||||||||||||| ||||||| ||| |||||||  |||||  |||||||||||||||    
T  22596056 gtccgacaccaacacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagtgt-tgtgtccggtgtccgtatccgtg 22595958  T
Q  162 cttcata 168  Q
    |||||||    
T  22595957 cttcata 22595951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 143
Target Start/End: Complemental strand, 5813705 - 5813575
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| ||||||| ||  |||||| |||| || ||||| ||||| |||| ||||||||||||||||||||| ||||||| || |||||||| |||| |||    
T  5813705 agcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtatttacactaaaatatgtgactttttcaaa 5813606  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgt 143  Q
    ||||||| ||||||| ||| || ||||||||    
T  5813605 ttattagctgtgtcggcgtgtccgtgtccgt 5813575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 22652035 - 22651949
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||||||||||||| | ||||||||||||  |||| |||||||||| ||||||| ||| |||||||||||||||||||||    
T  22652035 cgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 22651949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 67 - 152
Target Start/End: Original strand, 2572056 - 2572141
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtcc 152  Q
    ||||||||||||||||||||||||| ||||||||||  |||| |||||||||| ||||||||||| || || ||||||||||||||    
T  2572056 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtcgacgtgtcggtatccgtgtcgtgtcc 2572141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 29510306 - 29510390
Alignment:
Q  69 acaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||||||||||| |||||||| |||||  |||| |||||||||| ||||||| ||| |||||||||||||||||||||    
T  29510306 acaccgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 29510390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 41838131 - 41838207
Alignment:
Q  75 acacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    ||||||||| || |||||||||||||||  ||||||||||||||| ||||||||||| ||||||||||| |||||||    
T  41838131 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatcgtgtc 41838207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 8343080 - 8342931
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    |||||||||||||||| ||||||| |||| || ||||| |||||||||      ||||||||||||||||||||||||| ||||||||||  |||| |||    
T  8343080 agcacagacactcttcggattaggcgtgtcccggtgtcggacacatgta-----cgacaccgacacttgtaattacactaaattatgtgattttttcaaa 8342986  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtc--gtgtccgtatccgtgcttcata 168  Q
    ||||||| | |||||  || ||||||| ||||||   ||||||| |||||||||||||    
T  8342985 ttattagctatgtcg--gtgtcagtgt-cgtgtccgatgtccgtgtccgtgcttcata 8342931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 18407832 - 18407690
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| ||||||| ||  |||||| |||| | |||||| ||||  |||| |||||| || ||||||||||||||||||||||||||||||  ||||| ||    
T  18407832 agcacggacactcctccaattaggcgtgtcctagtgtcggacatgtgtcgtgtccggcagcgacacttgtaattacactgaattatgtgatttttttgaa 18407733  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtat 156  Q
    ||||||| ||||||| | | || |||| ||||||||||| ||||    
T  18407732 ttattagctgtgtcggcatgtctgtgt-cgtgtcgtgtcagtat 18407690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 153
Target Start/End: Original strand, 25192350 - 25192433
Alignment:
Q  70 caccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||| |||||| |||||||||||| || |||| |||||||||| ||||||| ||| ||||||||||| |||||||||    
T  25192350 caccgacacttataattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtgtccg 25192433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 63 - 168
Target Start/End: Original strand, 18170478 - 18170584
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtcc-gtatccgtg 161  Q
    ||||||||||||||| ||||||||||| |||||||||| |  |||| ||||| |||  ||||||| ||| ||||||||||||||||| || |||||||||    
T  18170478 tgtccgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtgaccggtatccgtg 18170577  T
Q  162 cttcata 168  Q
    | |||||    
T  18170578 catcata 18170584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 63 - 168
Target Start/End: Original strand, 18634046 - 18634152
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtcc-gtatccgtg 161  Q
    ||||||||||||||| ||||||||||| |||||||||| |  |||| ||||| |||  ||||||| ||| ||||||||||||||||| || |||||||||    
T  18634046 tgtccgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtgaccggtatccgtg 18634145  T
Q  162 cttcata 168  Q
    | |||||    
T  18634146 catcata 18634152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 4948715 - 4948659
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattag 119  Q
    ||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||    
T  4948715 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 4948659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 15816129 - 15816205
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgt 143  Q
    |||||||||||||| |||||||||| ||||||||||  |||| |||||||||| ||||||| ||| |||||||||||    
T  15816129 cgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgt 15816205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 25566900 - 25566841
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtc 126  Q
    ||||||||||||||||||||||||||||||||||||  |||| |||||||||| ||||||    
T  25566900 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 25566841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 3025664 - 3025558
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| ||||||| || ||||||  ||||  ||||||||||||| |||| |||||||||| ||||| | |||||||||||||||||||||  || | |||    
T  3025664 agcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccgacactgacacctataattacactgaattatgtgattttctcaaa 3025565  T
Q  113 ttattag 119  Q
    |||||||    
T  3025564 ttattag 3025558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 13436964 - 13437050
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||||||| |||||  ||||||||||||  |||| |||||||||| ||||||| ||| ||||||||| |||| ||||||    
T  13436964 cgacaccgacacttgttattaccatgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcatgtccg 13437050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 153
Target Start/End: Original strand, 22197743 - 22197828
Alignment:
Q  68 gacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||| |||||||||||||||||| ||||||||||  |||| |||||||||| ||||| | ||| | |||||| ||||||||||||    
T  22197743 gacactgacacttgtaattacactaaattatgtgaatttttcaaattattagctgtgttggcgtgttagtgtctgtgtcgtgtccg 22197828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 63 - 127
Target Start/End: Complemental strand, 24613583 - 24613520
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcg 127  Q
    ||||||||||||||||||||||||||||| ||||||||||  |||| |||||||||| |||||||    
T  24613583 tgtccgacaccgacacttgtaattacacttaattatgtga-tttttcaaattattagctgtgtcg 24613520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 153
Target Start/End: Original strand, 926767 - 926874
Alignment:
Q  46 gtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgt 145  Q
    ||||| ||||| ||||  ||||||||||||||||| |||||||||||||  ||| ||  || | ||||||||||  |||| | ||| |||||||||||||    
T  926767 gtgtcggacacgtgtcgcgtccgacaccgacacttataattacactgaacaatgagattttctcaaattattaggagtgttggcgtgtcagtgtccgtgt 926866  T
Q  146 cgtgtccg 153  Q
    ||||||||    
T  926867 cgtgtccg 926874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 4786324 - 4786411
Alignment:
Q  53 acacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtc 140  Q
    ||||||||| | |||||||||||||| | |||||||||||||||||||||  || |||||||||||   |||||| ||| ||||||||    
T  4786324 acacatgtcgtatccgacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagtgtc 4786411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 153
Target Start/End: Complemental strand, 31557064 - 31556970
Alignment:
Q  58 tgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||| |||| |||||||| ||||||||||||||||||||||||||  |||| |||||||||  ||||||| ||| |||||| || |||| ||||||    
T  31557064 tgtcgtgtctgacaccgaaacttgtaattacactgaattatgtga-tttttcaaattattaactgtgtcggcgtgtcagtgaccatgtcatgtccg 31556970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 40332298 - 40332215
Alignment:
Q  19 gacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtga 102  Q
    ||||||| || ||||||| | || || ||||  ||||| |||| ||||| ||||||||||||||||||||||||||||||||||    
T  40332298 gacactcctcggattaggcgcgtcccggtgtgggacacgtgtcgtgtcccacaccgacacttgtaattacactgaattatgtga 40332215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 154
Target Start/End: Original strand, 4298887 - 4298973
Alignment:
Q  68 gacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgt 154  Q
    |||||||||||||||||||||| | ||||||||||  |||| |||||||||  ||||||| ||| | ||| || |||||||||||||    
T  4298887 gacaccgacacttgtaattacattaaattatgtgattttttcaaattattaactgtgtcggcgtgttagtatctgtgtcgtgtccgt 4298973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 8343375 - 8343289
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||| |||||||||||||||||| ||||||||||  |||| |||||||||| | |||||  || || ||||| ||||||||||||    
T  8343375 cgacactgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcggtgtgtcggtgtcagtgtcgtgtccg 8343289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 28745557 - 28745471
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||| ||||| ||||| ||||| ||||||||||||  |||| ||||||||||  ||||||| |||||| | |||||||||||||||    
T  28745557 cgacatcgacatttgtagttacattgaattatgtgaatttttcaaattattagcagtgtcgatgtatcattatccgtgtcgtgtccg 28745471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 30077385 - 30077439
Alignment:
Q  65 tccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattag 119  Q
    |||||||| |||||||||||||||||||||||||||||  |||| ||||||||||    
T  30077385 tccgacacggacacttgtaattacactgaattatgtgatgttttcaaattattag 30077439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 153
Target Start/End: Original strand, 4673426 - 4673511
Alignment:
Q  68 gacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||| || |||||||||||||||||||| | |||  |||| |||||||||  ||||||| ||| |||||||| ||||||||||||    
T  4673426 gacactgatacttgtaattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccg 4673511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 160
Target Start/End: Complemental strand, 24669492 - 24669399
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgt 160  Q
    |||||||||||||||||||||||||||||||||| |  |  | |||||||||   |||||  ||| |||||||| ||||||||||||| |||||    
T  24669492 cgacaccgacacttgtaattacactgaattatgtaatttcctcaaattattaacggtgtcagcgtgtcagtgtctgtgtcgtgtccgtgtccgt 24669399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 63 - 143
Target Start/End: Complemental strand, 34897148 - 34897068
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgt 143  Q
    ||||||||| |||||| | |||||||||||||||||||||  || | ||||||||||  |||||||||| || ||||||||    
T  34897148 tgtccgacatcgacacatataattacactgaattatgtgattttctcaaattattagcggtgtcgacgtgtctgtgtccgt 34897068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 15023209 - 15023288
Alignment:
Q  19 gacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattat 98  Q
    ||||||| || ||||||  |||||||||  || ||||| |||| | ||||||| ||||||||||||||||||||||||||    
T  15023209 gacactcctcggattagacgtgttccagcatcggacacgtgtcgtatccgacatcgacacttgtaattacactgaattat 15023288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 16641915 - 16641974
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacac 72  Q
    ||||||||||||| || |||||||||||| || |||| ||||||||||| ||||||||||    
T  16641915 agcacagacactcctcggattaggtgtgtcccggtgttagacacatgtcgtgtccgacac 16641974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 29447111 - 29447174
Alignment:
Q  68 gacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgt 131  Q
    |||||||||||||||| ||||| ||||||||||||  || | |||||||||| |||||||||||    
T  29447111 gacaccgacacttgtagttacattgaattatgtgattttctcaaattattagttgtgtcgacgt 29447174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 30271291 - 30271366
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccg 142  Q
    |||||| | ||||||||||||||||| |||||||||  |||| |||| ||||| ||||||| ||| ||||||||||    
T  30271291 cgacactggcacttgtaattacactgcattatgtgattttttcaaatgattagctgtgtcggcgtgtcagtgtccg 30271366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 143
Target Start/End: Complemental strand, 22204704 - 22204622
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgt-gaca-tttttaaattattagatgtgtcgacgtatcagtgtccgt 143  Q
    |||| ||||| ||||||||||||||||||||||||| |  | | ||||||||||||||| ||||||| ||| |||||||||||    
T  22204704 tgtctgacactgacacttgtaattacactgaattatatatatattttttaaattattagttgtgtcggcgtgtcagtgtccgt 22204622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 24858129 - 24857982
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacac-----cgacacttgtaattacactgaattatgtgacattt 107  Q
    |||||| |||||| || ||||||| |||| || | ||  |||||||||| ||||||||||     ||||||||||| ||||||||||||||||||  |||    
T  24858129 agcacaaacactcctctgattaggcgtgtcccggcgtgggacacatgtcgtgtccgacacgacaacgacacttgta-ttacactgaattatgtgattttt 24858031  T
Q  108 tt---aaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||   |||||||||  ||||||| ||| ||  |||||||||||||||||    
T  24858030 ttttcaaattattaactgtgtcggcgtgtccatgtccgtgtcgtgtccg 24857982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 168
Target Start/End: Complemental strand, 29776080 - 29775994
Alignment:
Q  82 taattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgcttcata 168  Q
    |||||| ||||||||| ||||  || | ||||||||||  |||||||| | ||| ||||||||||||| |||||| |||||||||||    
T  29776080 taattatactgaattacgtgattttctcaaattattagcagtgtcgacttgtcaatgtccgtgtcgtgaccgtattcgtgcttcata 29775994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 151
Target Start/End: Complemental strand, 3677849 - 3677761
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    ||||| ||||||| || | ||||||||  |||||||||||  |||| |||||||||  |||||||| || ||||| |||||||||||||    
T  3677849 tgtccaacaccgatacatataattacatagaattatgtgattttttaaaattattaattgtgtcgatgtgtcagtatccgtgtcgtgtc 3677761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 3951499 - 3951571
Alignment:
Q  30 gattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtga 102  Q
    ||||||| ||||||| ||||||||||| |||| |||| ||||||||||| | ||| ||||||| ||| |||||    
T  3951499 gattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgacacatataagtacactgcattttgtga 3951571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 166
Target Start/End: Original strand, 13844592 - 13844689
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgtgc 162  Q
    |||||||||||||||| | |||||||||| ||||||||||  || | ||||||||||  |||||| |      |||||||||||||||| |||| |||||    
T  13844592 tgtccgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggc------gtgtccgtgtcgtgtctgtattcgtgc 13844685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 140
Target Start/End: Original strand, 20679396 - 20679468
Alignment:
Q  68 gacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtc 140  Q
    ||||||||||||| ||||||||||||| |||||||  || | ||||||||||  |||||||| | ||||||||    
T  20679396 gacaccgacacttataattacactgaactatgtgattttctcaaattattaggggtgtcgacatgtcagtgtc 20679468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 99
Target Start/End: Original strand, 30271251 - 30271287
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatg 99  Q
    |||||||||||||||||||||||||||||| ||||||    
T  30271251 tgtccgacaccgacacttgtaattacactgcattatg 30271287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 150
Target Start/End: Complemental strand, 36934714 - 36934646
Alignment:
Q  82 taattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgt 150  Q
    |||||||| ||||||||||||  ||||  |||||||||  |||||||||| | ||||||||||||||||    
T  36934714 taattacaatgaattatgtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtgtcgtgt 36934646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 43737790 - 43737846
Alignment:
Q  46 gtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtga 102  Q
    ||||||||||| |||| |||||||||||||||| | ||||||||||| ||| |||||    
T  43737790 gtgtcagacacctgtcgtgtccgacaccgacacatataattacactgtattttgtga 43737846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 11927086 - 11927169
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgt 150  Q
    |||||||||||| | |||||||||||||||||||||  || | |||||||||   |||||| ||||| ||  ||||||||||||    
T  11927086 cgacaccgacacatataattacactgaattatgtgattttatcaaattattaacagtgtcggcgtattagcatccgtgtcgtgt 11927169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 33405363 - 33405418
Alignment:
Q  46 gtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtg 101  Q
    ||||||||||  |||| |||||||||||||||| | |||||||||| |||||||||    
T  33405363 gtgtcagacatgtgtcgtgtccgacaccgacacatataattacactaaattatgtg 33405418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 14134757 - 14134662
Alignment:
Q  68 gacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtc-gtgtccgtatccgtgcttca 166  Q
    ||||||||||  | |||||||||||||||||||||  || | ||||||||||   |||||||      ||||||||||| ||||||||||||||||||||    
T  14134757 gacaccgacatatataattacactgaattatgtgattttctcaaattattagtattgtcgac------gtgtccgtgtcggtgtccgtatccgtgcttca 14134664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 127
Target Start/End: Original strand, 41831946 - 41832000
Alignment:
Q  73 cgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcg 127  Q
    ||||||||||| ||||||||||||||||||  |||| |||||||||  |||||||    
T  41831946 cgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcg 41832000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 165
Target Start/End: Original strand, 9414860 - 9414973
Alignment:
Q  52 gacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    ||||| |||| |||| |||||| |||||| ||||| |||||||||||||||   |||| ||||||||  | |||||   | |||||||| ||||||| ||    
T  9414860 gacacgtgtcgtgtctgacaccaacacttataattgcactgaattatgtgattatttttaattattaattatgtcggtatgtcagtgtctgtgtcgtatc 9414959  T
Q  152 cgtatccgtgcttc 165  Q
     ||||| |||||||    
T  9414960 tgtatctgtgcttc 9414973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 11803316 - 11803235
Alignment:
Q  69 acaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgt 150  Q
    ||||| |||| | |||||||||||||||||||||  || |||||||||||   |||||   |||||||||| ||||||||||    
T  11803316 acaccaacacatataattacactgaattatgtgattttcttaaattattaacagtgtcagtgtatcagtgttcgtgtcgtgt 11803235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 22652100 - 22652035
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacac 78  Q
    ||||| ||||||| || ||||||  |||| || ||||| |||||||||| ||||||||||||||||    
T  22652100 agcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacac 22652035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 27213601 - 27213520
Alignment:
Q  72 ccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||||| | |||||||| ||||||||||||  || | ||||||||||  |||||| ||| || || |||||||||||||||    
T  27213601 ccgacacatataattacagtgaattatgtgattttctgaaattattagcagtgtcggcgtgtctgtatccgtgtcgtgtccg 27213520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 126
Target Start/End: Complemental strand, 31514941 - 31514872
Alignment:
Q  58 tgtcttgtccgacaccgacacttgtaattacactgaattatgtgacattttt-aaattattagatgtgtc 126  Q
    |||| ||||| ||||| ||||||||| |||| |||||||||||||  ||||| |||||||||| ||||||    
T  31514941 tgtcgtgtccaacaccaacacttgtagttacgctgaattatgtgatttttttcaaattattagttgtgtc 31514872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 153
Target Start/End: Complemental strand, 28642457 - 28642381
Alignment:
Q  77 acttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||||| |||||||||||||||| |  |||| |||||||||   ||||| | || ||| |||||||||||||||||    
T  28642457 acttgtagttacactgaattatgtaaatttttcaaattattaaccgtgtcaatgtgtcattgtccgtgtcgtgtccg 28642381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 29447045 - 29447109
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgaca 77  Q
    ||||| ||||||| |  ||||||| |||| |  |||||||||||||||| |||||||||||||||    
T  29447045 agcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgaca 29447109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 31580090 - 31580178
Alignment:
Q  30 gattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattatta 118  Q
    ||||||||||||| | |||||  |||  ||||  |||||||| |||||| | |||||||||| ||||||||||  || |||||||||||    
T  31580090 gattaggtgtgtttcggtgtcgaacatgtgtcgcgtccgacatcgacacctataattacactcaattatgtgattttcttaaattatta 31580178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 8911 - 8771
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaa 112  Q
    ||||| || |||| |||||||||| ||||  | ||||| ||||| |||| ||||||||||||||||||||||||||||| ||| || |||  |||| |||    
T  8911 agcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaataatatgattttttcaaa 8812  T
Q  113 ttattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||||| ||||||| ||| |||||||||||||||||||||    
T  8811 ttattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 8771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 20231 - 20145
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||| |||||||||||||||||||||||||||||  |||| |||||||||| ||||||| ||| ||| |||||||||||||||||    
T  20231 cgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccg 20145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 153
Target Start/End: Original strand, 45509 - 45617
Alignment:
Q  46 gtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgt-gacatttttaaattattagatgtgtcgacgtatcagtgtccgtg 144  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||     |||||| || ||||  ||||||||||| ||||||||||||    
T  45509 gtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtatttttttttagataattaattgtgtcgacgtgtcagtgtccgtg 45608  T
Q  145 tcgtgtccg 153  Q
    | |||||||    
T  45609 ttgtgtccg 45617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 70358 - 70238
Alignment:
Q  46 gtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtg- 144  Q
    ||||| ||||| |||| |||||||||||||||||| ||||||||||||||||||| |  |||| |||||||||  ||||||||| | || ||||| |||     
T  70358 gtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgttattttttcaaattattaactgtgtcgacatgtctgtgtctgtgt 70259  T
Q  145 tcgtgtccgtatccgtgcttc 165  Q
    | |||||||||||||||||||    
T  70258 ttgtgtccgtatccgtgcttc 70238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 13519 - 13351
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacac------ttgtaattacactgaattatgtgacatt 106  Q
    ||||| ||||||| |  |||||||||||| | |||||||||| | |||| ||||||||||||||||      |||||||| |||||||||||||||  ||    
T  13519 agcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacaccgacccttgtaattgcactgaattatgtgatttt 13420  T
Q  107 tttaaattattagatgtgtcgacgtatcagtgtccgtgtc-------gtgtccgtatccgtgcttcata 168  Q
     | |||||||||| ||||||| ||| ||||||||||||||       ||||||||||||||||||||||    
T  13419 ctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccgtgcttcata 13351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 21808 - 21976
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgaca------cttgtaattacactgaattatgtgacatt 106  Q
    ||||| ||||||| |  |||||||||||| | |||||||||| | |||| |||||||||||||||      ||||||||| |||||||||||||||  ||    
T  21808 agcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacaccgacccttgtaattgcactgaattatgtgatttt 21907  T
Q  107 tttaaattattagatgtgtcgacgtatcagtgtccgtgtc-------gtgtccgtatccgtgcttcata 168  Q
     | |||||||||| ||||||| ||| ||||||||||||||       ||||||||||||||||||||||    
T  21908 ctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccgtgcttcata 21976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 46741 - 46655
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||| ||||||||||||||||||||||||  |||| |||||||||  ||||||| ||| ||| |||||||||||||||||    
T  46741 cgacaccgacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccg 46655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 153
Target Start/End: Original strand, 178819 - 178905
Alignment:
Q  68 gacaccgacacttgtaattacactgaattatg-tgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    ||||| |||||||||||||||||||||||||| |||  |||| |||||||||| ||||||| ||| |||||||||||||||||||||    
T  178819 gacactgacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccg 178905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 160
Target Start/End: Original strand, 192256 - 192342
Alignment:
Q  74 gacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgt 160  Q
    ||||||||||||||||| ||||||||| |  || | |||||||||   |||||| ||| ||||||||||| ||||||| || |||||    
T  192256 gacacttgtaattacaccgaattatgtaattttctcaaattattaacggtgtcggcgtgtcagtgtccgtatcgtgtctgtgtccgt 192342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 67 - 168
Target Start/End: Complemental strand, 241653 - 241551
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtcc-gtatccgtgcttc 165  Q
    |||||||||||||  |||||||||| ||||||||||  |||  |||||||||| ||||||| ||| |||||||||||||||||||| || ||||||||||    
T  241653 cgacaccgacactcataattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgcttc 241554  T
Q  166 ata 168  Q
    |||    
T  241553 ata 241551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 236920 - 236963
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacac 56  Q
    ||||||||||||| ||||||||||||||| || |||||||||||    
T  236920 agcacagacactcctcagattaggtgtgtcccggtgtcagacac 236963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 160
Target Start/End: Complemental strand, 23479 - 23386
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccgtatccgt 160  Q
    |||||||||||||| |||||||||||||||||||||  ||||| | ||||||  ||||||| ||| |||||||| ||||||||||||| |||||    
T  23479 cgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgtgtccgt 23386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 23570 - 23483
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtga-catttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||| ||||||| |||||||||||||||||||||   ||||||| ||||||  |||||||  || |||||||  ||||||||||||    
T  23570 cgacactgacacttataattacactgaattatgtgattttttttaagttattaactgtgtcggtgtgtcagtgtatgtgtcgtgtccg 23483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 51862 - 51769
Alignment:
Q  75 acacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgt-cgtgtccgtatccgtgcttcat 167  Q
    ||||||||||||||||||||||||||||  |||| |||||||||| ||||||| ||| ||||||||||||| ||| ||| |||| |||||||||    
T  51862 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgtatccatatctgtgcttcat 51769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 63 - 143
Target Start/End: Original strand, 7028 - 7108
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgt 143  Q
    ||||||||||| ||||||||||||| ||| |||||||| |  |||| |||||||||| |||||||||||||||||||||||    
T  7028 tgtccgacacctacacttgtaattatactaaattatgtaattttttcaaattattagctgtgtcgacgtatcagtgtccgt 7108  T

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Target: scaffold0136 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 151
Target Start/End: Original strand, 3849 - 3933
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtc 151  Q
    |||||| |||||||||||||||||||||||||||||  ||||||||||||||   |||||| | |||||||||| ||||||||||    
T  3849 cgacactgacacttgtaattacactgaattatgtgatttttttaaattattaaccgtgtcggcatatcagtgtctgtgtcgtgtc 3933  T

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Target: scaffold0122 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 8725 - 8639
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||||| |||||| |||||| |||||||  ||  |||||||||||| |||||||||| ||||||||| |||||||||||    
T  8725 cgacaccgacacttataattatactgaactatgtgattttcctaaattattagaagtgtcgacgtgtcagtgtccatgtcgtgtccg 8639  T

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Target: scaffold0122; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 8115 - 8009
Alignment:
Q  20 acactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattag 119  Q
    |||| |||| ||||||||||||||   | ||  ||| ||||| |||||||||||||||||| ||||||||||| ||||| |||  |||| ||||||||||    
T  8115 acacccttcggattaggtgtgttctgatatcgaacatatgtcgtgtccgacaccgacactt-taattacactgtattatatgattttttcaaattattag 8017  T
Q  120 atgtgtcg 127  Q
     |||||||    
T  8016 ttgtgtcg 8009  T

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Target: scaffold0246 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 154
Target Start/End: Complemental strand, 19676 - 19548
Alignment:
Q  30 gattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgaca-----cttgtaattacactgaattatgtgacatttttaaattattagatgtg 124  Q
    ||||| ||||||| | ||||| ||||| |||| ||||| |||||||||     |||||||||||||||||||||||||  |||| |||||||||| |||     
T  19676 gattaagtgtgtttcggtgtcggacacgtgtcgtgtccaacaccgacataacacttgtaattacactgaattatgtga-tttttcaaattattagttgta 19578  T
Q  125 tcgacgtatcagtgtccgtgtcgtgtccgt 154  Q
    ||| ||| |||||||| |||||||||||||    
T  19577 tcggcgtgtcagtgtcagtgtcgtgtccgt 19548  T

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Target: scaffold0021 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 70 - 153
Target Start/End: Complemental strand, 130538 - 130455
Alignment:
Q  70 caccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||||||||||||||||||||||||  |||| ||| |||||  ||||||| | | ||| |||||||||||||||||    
T  130538 caccgacacttgtaattacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgtgtcgtgtccg 130455  T

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Target: scaffold0475 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 3421 - 3338
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaatt 96  Q
    ||||| ||||||| || ||||||| |||| ||||||||   ||| ||||||||||||||| |||||||||||||||||| ||||    
T  3421 agcacggacactcctcggattaggcgtgtcccagtgtccaccacgtgtcttgtccgacactgacacttgtaattacacttaatt 3338  T

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Target: scaffold0361 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 14607 - 14529
Alignment:
Q  46 gtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcg 127  Q
    ||||| ||||| |||| |||||||||||   ||||||||||||||||||||||||||  |||| |||||||||| |||||||    
T  14607 gtgtcggacacgtgtcgtgtccgacacc---acttgtaattacactgaattatgtgattttttcaaattattagttgtgtcg 14529  T

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Target: scaffold0019 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 168
Target Start/End: Complemental strand, 71784 - 71680
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacattttt--aaattattagatgtgtcgacgtatcagtgtccgtgtc--gtgtccgtatccgtgc 162  Q
    |||||| |||||| |||||||||||||||| |||||  |||||  |||||||||| ||||||| ||| ||||||| ||||||   |||||||||||||||    
T  71784 cgacactgacactagtaattacactgaattgtgtgattttttttcaaattattagctgtgtcggcgtgtcagtgt-cgtgtccgatgtccgtatccgtgc 71686  T
Q  163 ttcata 168  Q
    ||||||    
T  71685 ttcata 71680  T

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Target: scaffold0793 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 127
Target Start/End: Original strand, 4827 - 4944
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtcc--gacaccgacacttgtaattacactgaattatgtga-cattttt 109  Q
    ||||| ||||||| || ||||||| |||| || ||||| ||||  |||| ||| |  |||||| ||||||||||||||||||||||||||||   |||||    
T  4827 agcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgatttttttt 4926  T
Q  110 aaattattagatgtgtcg 127  Q
    |||||||||| |||||||    
T  4927 aaattattagctgtgtcg 4944  T

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Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 126
Target Start/End: Original strand, 17750 - 17808
Alignment:
Q  68 gacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtc 126  Q
    |||||||||||||||||||||||| ||||||||||  |||| |||||||||| ||||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtc 17808  T

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Target: scaffold0512 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 4982 - 5058
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattaca 89  Q
    ||||||||||||| || |||||||  |||  || |||| ||||| |||| |||||||||||||||||||||||||||    
T  4982 agcacagacactcctcggattaggcatgtctcaatgtcggacacgtgtcgtgtccgacaccgacacttgtaattaca 5058  T

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Target: scaffold0450 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 127
Target Start/End: Original strand, 8635 - 8695
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcg 127  Q
    ||||||||||| ||||||||| || ||||||||||| ||||| |||||||||| |||||||    
T  8635 cgacaccgacatttgtaattataccgaattatgtgatattttcaaattattagttgtgtcg 8695  T

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Target: scaffold0025 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 118
Target Start/End: Complemental strand, 23829 - 23777
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacattttt-aaattatta 118  Q
    ||||||||||||||||||||||||||||||||||||  ||||| |||||||||    
T  23829 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattatta 23777  T

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Target: scaffold0004 (Bit Score: 37; Significance: 0.000000000007; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 123686 - 123612
Alignment:
Q  68 gacaccgacacttgtaattacactgaattatgtga---catttttaaattattagatgtgtcgacgtatcagtgt 139  Q
    |||||||||||||||||||||||||||||||||||     ||||||||||||||| ||||| | ||| |||||||    
T  123686 gacaccgacacttgtaattacactgaattatgtgattctttttttaaattattagctgtgttggcgtgtcagtgt 123612  T

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Target: scaffold0004; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 143
Target Start/End: Complemental strand, 92859 - 92790
Alignment:
Q  74 gacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgt 143  Q
    ||||||||||||||||||||||||||| |  || | ||||||||||  |||||| ||| |||||||||||    
T  92859 gacacttgtaattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgtccgt 92790  T

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Target: scaffold0004; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 114
Target Start/End: Complemental strand, 83219 - 83172
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaatt 114  Q
    ||||||||||| |||||||||||||||||||||| |  ||||||||||    
T  83219 cgacaccgacatttgtaattacactgaattatgtcatttttttaaatt 83172  T

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Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 174516 - 174586
Alignment:
Q  30 gattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgt 100  Q
    ||||||| |||||||  |||| |||||||| | ||||| ||||||||| |||||||||| |||||||||||    
T  174516 gattaggcgtgttccgatgtcggacacatgacgtgtccaacaccgacatttgtaattacgctgaattatgt 174586  T

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Target: scaffold0009; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 180029 - 180099
Alignment:
Q  30 gattaggtgtgttccagtgtcagacacatgtcttgtccgacaccgacacttgtaattacactgaattatgt 100  Q
    ||||||| |||||||  |||| |||||||| | ||||| ||||||||| |||||||||| |||||||||||    
T  180029 gattaggcgtgttccgatgtcggacacatgacgtgtccaacaccgacatttgtaattacgctgaattatgt 180099  T

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Target: scaffold0008 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 148
Target Start/End: Original strand, 263372 - 263453
Alignment:
Q  67 cgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgt 148  Q
    |||||| ||||||| ||||||||||||||||||||   || | ||||||||||  |||| ||| | ||||||||||||||||    
T  263372 cgacactgacacttataattacactgaattatgtggttttctcaaattattagcagtgttgacatgtcagtgtccgtgtcgt 263453  T

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Target: scaffold0007 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 225274 - 225354
Alignment:
Q  73 cgacacttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||||||| |||||||| || ||||||| |  || | |||||||||  ||||||| ||| |||||||||||||||||||||    
T  225274 cgacacttataattacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 225354  T

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Target: scaffold0049 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 153
Target Start/End: Complemental strand, 63836 - 63745
Alignment:
Q  63 tgtccgacaccgacacttgtaattacactgaattatgtgacatttttaaattattagatgtg-tcgacgtatcagtgtccgtgtcgtgtccg 153  Q
    |||| ||||||||||||||||||| ||||||||||||| |  || | ||||||||||  ||| | ||||| ||| |||||||||||| ||||    
T  63836 tgtctgacaccgacacttgtaattgcactgaattatgtaattttctcaaattattagcggtgttagacgtgtcattgtccgtgtcgtatccg 63745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 35735 - 35692
Alignment:
Q  13 agcacagacactcttcagattaggtgtgttccagtgtcagacac 56  Q
    ||||||||||||||||||| |||||||||| | |||||||||||    
T  35735 agcacagacactcttcagagtaggtgtgtttcggtgtcagacac 35692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 33375 - 33463
Alignment:
Q  79 ttgtaattacactgaattatgtgacatttttaaattattagatgtgtcgacgtatcagtgtccgtgtc--gtgtccgtatccgtgcttcata 168  Q
    |||||||||||||||||||||| |  |||| |||||||||| ||||||| ||| || ||   ||||||  |||||| |||||||||||||||    
T  33375 ttgtaattacactgaattatgttattttttcaaattattagctgtgtcggcgtgtctgt---cgtgtccggtgtccttatccgtgcttcata 33463  T

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Target: scaffold0279 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 168
Target Start/End: Complemental strand, 17768 - 17736
Alignment:
Q  136 gtgtccgtgtcgtgtccgtatccgtgcttcata 168  Q
    |||||||||||||||||||||| ||||||||||    
T  17768 gtgtccgtgtcgtgtccgtatctgtgcttcata 17736  T

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Target: scaffold0044 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 102
Target Start/End: Complemental strand, 53236 - 53204
Alignment:
Q  70 caccgacacttgtaattacactgaattatgtga 102  Q
    ||||||||||| |||||||||||||||||||||    
T  53236 caccgacacttataattacactgaattatgtga 53204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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