View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2087_low_13 (Length: 385)

Name: NF2087_low_13
Description: NF2087
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2087_low_13
NF2087_low_13
[»] chr4 (61 HSPs)
chr4 (149-249)||(12895115-12895211)
chr4 (123-221)||(54579996-54580094)
chr4 (132-209)||(23292968-23293045)
chr4 (132-210)||(28964230-28964308)
chr4 (141-209)||(31800469-31800537)
chr4 (140-209)||(21945503-21945572)
chr4 (140-221)||(29205432-29205513)
chr4 (149-248)||(30298910-30299007)
chr4 (149-248)||(30327778-30327875)
chr4 (138-209)||(49431025-49431097)
chr4 (140-226)||(4157133-4157218)
chr4 (132-209)||(38846994-38847071)
chr4 (149-209)||(3947765-3947825)
chr4 (142-209)||(2361967-2362034)
chr4 (149-204)||(11596351-11596406)
chr4 (151-209)||(24613702-24613760)
chr4 (140-209)||(715595-715667)
chr4 (140-209)||(752921-752993)
chr4 (132-201)||(12895256-12895325)
chr4 (149-209)||(28084521-28084582)
chr4 (141-209)||(8423709-8423777)
chr4 (143-190)||(12797331-12797378)
chr4 (144-191)||(42640547-42640594)
chr4 (152-201)||(6485613-6485662)
chr4 (163-208)||(14465088-14465133)
chr4 (168-225)||(18844491-18844548)
chr4 (132-209)||(34306786-34306862)
chr4 (158-252)||(37203220-37203315)
chr4 (149-209)||(19482668-19482728)
chr4 (149-209)||(51701258-51701318)
chr4 (158-209)||(11651142-11651193)
chr4 (138-189)||(13307897-13307948)
chr4 (143-190)||(16073413-16073460)
chr4 (151-201)||(28000743-28000794)
chr4 (149-238)||(50280850-50280943)
chr4 (140-190)||(4157455-4157505)
chr4 (144-190)||(6879459-6879505)
chr4 (165-227)||(21873386-21873448)
chr4 (165-227)||(21929247-21929309)
chr4 (140-202)||(35157975-35158037)
chr4 (149-209)||(12708146-12708207)
chr4 (140-201)||(40179626-40179687)
chr4 (151-203)||(847957-848009)
chr4 (149-201)||(27706176-27706228)
chr4 (132-220)||(35161025-35161113)
chr4 (150-209)||(15029765-15029824)
chr4 (156-209)||(20633485-20633535)
chr4 (149-203)||(30982877-30982931)
chr4 (165-203)||(32915621-32915658)
chr4 (148-209)||(35723382-35723444)
chr4 (152-231)||(37496680-37496761)
chr4 (165-203)||(40774287-40774325)
chr4 (135-189)||(44362686-44362740)
chr4 (217-251)||(46160852-46160886)
chr4 (151-209)||(47263986-47264044)
chr4 (149-190)||(4383386-4383427)
chr4 (153-209)||(24543981-24544038)
chr4 (145-189)||(13117449-13117493)
chr4 (149-201)||(16303265-16303317)
chr4 (151-203)||(33950142-33950194)
chr4 (158-190)||(40481655-40481687)
[»] chr6 (80 HSPs)
chr6 (138-228)||(28715276-28715366)
chr6 (132-251)||(17841571-17841687)
chr6 (138-209)||(34595134-34595205)
chr6 (149-209)||(16766697-16766757)
chr6 (149-248)||(12696277-12696384)
chr6 (144-209)||(426508-426573)
chr6 (132-209)||(28152099-28152175)
chr6 (145-209)||(7977825-7977889)
chr6 (149-209)||(9107369-9107429)
chr6 (149-208)||(10770673-10770732)
chr6 (138-209)||(33001277-33001348)
chr6 (139-209)||(8776962-8777032)
chr6 (149-208)||(9911527-9911587)
chr6 (149-252)||(5970107-5970219)
chr6 (150-209)||(7801156-7801215)
chr6 (140-209)||(4877942-4878012)
chr6 (152-202)||(9522898-9522948)
chr6 (151-209)||(15489733-15489791)
chr6 (139-209)||(16833308-16833378)
chr6 (157-250)||(17302518-17302609)
chr6 (132-209)||(24645480-24645558)
chr6 (140-209)||(32978889-32978959)
chr6 (144-225)||(403858-403938)
chr6 (132-209)||(853841-853918)
chr6 (132-209)||(1191682-1191759)
chr6 (132-209)||(7377979-7378056)
chr6 (149-202)||(31384927-31384980)
chr6 (155-249)||(31959111-31959213)
chr6 (149-209)||(8365518-8365578)
chr6 (158-209)||(17435199-17435250)
chr6 (151-209)||(7938116-7938174)
chr6 (141-211)||(32511657-32511727)
chr6 (156-209)||(1681758-1681811)
chr6 (156-250)||(2117034-2117129)
chr6 (140-209)||(19040352-19040421)
chr6 (150-209)||(3209381-3209441)
chr6 (143-211)||(6898274-6898342)
chr6 (149-209)||(9025493-9025553)
chr6 (149-201)||(9617442-9617494)
chr6 (138-209)||(30851602-30851671)
chr6 (158-201)||(4118341-4118384)
chr6 (145-208)||(7265588-7265651)
chr6 (150-209)||(9629383-9629442)
chr6 (145-199)||(1700362-1700416)
chr6 (140-251)||(5626686-5626799)
chr6 (165-211)||(24115862-24115908)
chr6 (149-250)||(3398569-3398678)
chr6 (149-209)||(8713979-8714040)
chr6 (132-209)||(23771579-23771655)
chr6 (160-209)||(25010212-25010261)
chr6 (155-208)||(30866149-30866202)
chr6 (147-203)||(6214566-6214622)
chr6 (149-201)||(7930313-7930365)
chr6 (149-189)||(19369837-19369877)
chr6 (143-191)||(26402673-26402721)
chr6 (162-205)||(2224230-2224273)
chr6 (150-189)||(6751882-6751921)
chr6 (138-209)||(9658879-9658950)
chr6 (150-209)||(20371110-20371169)
chr6 (149-208)||(21395307-21395365)
chr6 (151-205)||(31429004-31429059)
chr6 (149-183)||(785454-785488)
chr6 (139-181)||(16388206-16388248)
chr6 (140-201)||(31579217-31579276)
chr6 (149-211)||(32320668-32320730)
chr6 (150-191)||(7027260-7027301)
chr6 (149-202)||(7151419-7151472)
chr6 (149-198)||(7973665-7973714)
chr6 (151-209)||(27904037-27904097)
chr6 (152-201)||(32299283-32299332)
chr6 (143-183)||(1334687-1334727)
chr6 (150-210)||(6327518-6327578)
chr6 (149-209)||(9027178-9027238)
chr6 (141-209)||(12868671-12868734)
chr6 (150-226)||(14155239-14155315)
chr6 (149-209)||(16488589-16488649)
chr6 (157-201)||(17341671-17341715)
chr6 (149-209)||(18367836-18367896)
chr6 (145-209)||(21924930-21924994)
chr6 (149-209)||(26562689-26562749)
[»] chr1 (91 HSPs)
chr1 (132-250)||(51409981-51410102)
chr1 (140-209)||(38078651-38078720)
chr1 (132-209)||(22515869-22515946)
chr1 (149-250)||(24577185-24577289)
chr1 (132-249)||(46348365-46348479)
chr1 (132-228)||(18190090-18190186)
chr1 (132-230)||(18337309-18337406)
chr1 (149-235)||(17778523-17778606)
chr1 (149-211)||(1486708-1486770)
chr1 (140-209)||(22881606-22881675)
chr1 (149-209)||(113299-113359)
chr1 (140-219)||(40258923-40259002)
chr1 (140-201)||(1815265-1815326)
chr1 (144-209)||(19058850-19058915)
chr1 (144-209)||(31672889-31672954)
chr1 (132-209)||(37598832-37598908)
chr1 (150-211)||(42359449-42359510)
chr1 (149-209)||(1704991-1705051)
chr1 (139-252)||(24334694-24334812)
chr1 (149-201)||(47989505-47989557)
chr1 (149-206)||(6612170-6612227)
chr1 (149-238)||(18556455-18556541)
chr1 (152-209)||(21378578-21378635)
chr1 (155-208)||(31015044-31015097)
chr1 (143-252)||(35702581-35702693)
chr1 (151-211)||(28273089-28273149)
chr1 (141-208)||(5927331-5927398)
chr1 (148-191)||(28663626-28663669)
chr1 (152-207)||(32461465-32461520)
chr1 (153-226)||(52284685-52284759)
chr1 (149-207)||(5944283-5944343)
chr1 (152-209)||(32434718-32434775)
chr1 (149-238)||(34371685-34371773)
chr1 (144-209)||(41877464-41877529)
chr1 (155-208)||(48450592-48450645)
chr1 (149-209)||(5376499-5376559)
chr1 (149-209)||(6332671-6332730)
chr1 (138-218)||(40181862-40181942)
chr1 (148-199)||(2283676-2283727)
chr1 (138-209)||(5898254-5898325)
chr1 (149-208)||(6427351-6427410)
chr1 (157-252)||(14359529-14359625)
chr1 (138-189)||(29163369-29163420)
chr1 (149-252)||(30173761-30173867)
chr1 (149-209)||(31694709-31694771)
chr1 (151-250)||(36878417-36878519)
chr1 (149-191)||(6427482-6427524)
chr1 (154-209)||(18471298-18471355)
chr1 (152-209)||(1864882-1864939)
chr1 (152-209)||(23738678-23738735)
chr1 (149-210)||(25272481-25272542)
chr1 (156-228)||(26830568-26830641)
chr1 (149-209)||(40917751-40917809)
chr1 (165-209)||(398780-398824)
chr1 (165-209)||(1262884-1262928)
chr1 (145-209)||(9103640-9103703)
chr1 (149-209)||(9629899-9629959)
chr1 (144-208)||(9709821-9709885)
chr1 (158-209)||(13011223-13011275)
chr1 (167-211)||(30847737-30847781)
chr1 (145-209)||(39953141-39953205)
chr1 (166-209)||(12443476-12443519)
chr1 (144-191)||(21620973-21621020)
chr1 (132-211)||(22781440-22781519)
chr1 (149-228)||(25361867-25361946)
chr1 (150-201)||(31667433-31667484)
chr1 (149-255)||(35919275-35919391)
chr1 (148-190)||(15449230-15449272)
chr1 (169-207)||(21366039-21366077)
chr1 (165-203)||(23531793-23531831)
chr1 (151-197)||(28170393-28170439)
chr1 (145-195)||(30749854-30749904)
chr1 (145-195)||(30771305-30771355)
chr1 (149-199)||(44482240-44482290)
chr1 (149-210)||(48148036-48148098)
chr1 (145-201)||(2288164-2288218)
chr1 (149-202)||(7918210-7918263)
chr1 (149-202)||(9828051-9828104)
chr1 (144-209)||(13436458-13436523)
chr1 (152-201)||(13997891-13997940)
chr1 (132-201)||(19637776-19637845)
chr1 (205-250)||(29144427-29144472)
chr1 (144-201)||(52903257-52903314)
chr1 (142-202)||(14332634-14332694)
chr1 (165-201)||(16164330-16164366)
chr1 (142-190)||(17007953-17008001)
chr1 (165-201)||(17425108-17425144)
chr1 (149-209)||(20157349-20157409)
chr1 (152-205)||(26526758-26526813)
chr1 (151-203)||(27471567-27471619)
chr1 (157-209)||(29144365-29144417)
[»] chr8 (63 HSPs)
chr8 (149-228)||(25566822-25566901)
chr8 (146-250)||(8342930-8343035)
chr8 (149-209)||(22651976-22652036)
chr8 (132-251)||(36450736-36450852)
chr8 (133-250)||(22595950-22596070)
chr8 (151-252)||(4298887-4298996)
chr8 (143-202)||(4948659-4948718)
chr8 (131-201)||(20873077-20873147)
chr8 (138-250)||(40332155-40332262)
chr8 (132-209)||(5813592-5813669)
chr8 (144-209)||(8343316-8343381)
chr8 (140-209)||(18407719-18407788)
chr8 (149-209)||(2572055-2572115)
chr8 (149-209)||(13436963-13437023)
chr8 (149-209)||(21465412-21465472)
chr8 (151-209)||(29447111-29447169)
chr8 (144-209)||(24613521-24613585)
chr8 (152-209)||(29510306-29510363)
chr8 (139-223)||(31514858-31514943)
chr8 (149-209)||(15816128-15816188)
chr8 (150-205)||(30077387-30077442)
chr8 (143-209)||(31236570-31236636)
chr8 (132-209)||(41831917-41831999)
chr8 (138-203)||(3025557-3025622)
chr8 (151-208)||(22197743-22197800)
chr8 (140-209)||(31556997-31557065)
chr8 (149-209)||(28745498-28745558)
chr8 (149-209)||(30271290-30271350)
chr8 (158-210)||(44694790-44694842)
chr8 (150-197)||(18170482-18170529)
chr8 (150-197)||(18634050-18634097)
chr8 (150-250)||(24669384-24669492)
chr8 (158-209)||(41838131-41838182)
chr8 (139-201)||(3677794-3677856)
chr8 (151-209)||(12606830-12606888)
chr8 (133-202)||(14134706-14134775)
chr8 (141-201)||(4786329-4786389)
chr8 (152-208)||(7442846-7442902)
chr8 (149-201)||(11927085-11927137)
chr8 (145-209)||(13844591-13844655)
chr8 (153-209)||(25192350-25192406)
chr8 (145-209)||(34897085-34897149)
chr8 (152-195)||(18964191-18964234)
chr8 (151-202)||(20679396-20679447)
chr8 (132-202)||(926770-926840)
chr8 (151-209)||(4673426-4673484)
chr8 (131-181)||(15023238-15023288)
chr8 (149-211)||(25172697-25172759)
chr8 (152-202)||(26434187-26434237)
chr8 (155-209)||(27213547-27213601)
chr8 (167-201)||(29519203-29519237)
chr8 (132-201)||(9414857-9414926)
chr8 (148-189)||(26902173-26902214)
chr8 (140-201)||(33405374-33405435)
chr8 (152-201)||(44505135-44505184)
chr8 (152-212)||(11803256-11803316)
chr8 (149-201)||(11944673-11944725)
chr8 (154-250)||(12882332-12882428)
chr8 (145-201)||(12985400-12985456)
chr8 (149-209)||(17468507-17468567)
chr8 (167-199)||(22493504-22493536)
chr8 (176-208)||(35519833-35519865)
chr8 (165-209)||(36934670-36934714)
[»] chr7 (66 HSPs)
chr7 (149-228)||(9778481-9778560)
chr7 (142-221)||(19213791-19213870)
chr7 (149-209)||(24339642-24339702)
chr7 (149-221)||(26033460-26033532)
chr7 (151-209)||(7438706-7438764)
chr7 (143-209)||(25481902-25481968)
chr7 (140-209)||(7197287-7197356)
chr7 (132-252)||(15680769-15680886)
chr7 (149-211)||(5409835-5409897)
chr7 (149-209)||(3991324-3991384)
chr7 (149-209)||(13770691-13770751)
chr7 (140-203)||(21880158-21880221)
chr7 (151-209)||(11061077-11061135)
chr7 (165-235)||(11700777-11700847)
chr7 (151-225)||(13300394-13300468)
chr7 (149-251)||(43027468-43027579)
chr7 (148-201)||(9408332-9408385)
chr7 (148-209)||(19992001-19992062)
chr7 (149-205)||(18215185-18215241)
chr7 (132-209)||(21864806-21864885)
chr7 (149-209)||(35861964-35862024)
chr7 (148-191)||(21560521-21560564)
chr7 (172-250)||(23746868-23746947)
chr7 (150-250)||(24105629-24105737)
chr7 (149-252)||(27944989-27945101)
chr7 (149-191)||(18039017-18039059)
chr7 (132-209)||(598208-598285)
chr7 (149-221)||(7058414-7058486)
chr7 (151-211)||(11665441-11665501)
chr7 (151-203)||(24146822-24146874)
chr7 (145-209)||(28155570-28155634)
chr7 (149-208)||(32094019-32094079)
chr7 (151-191)||(48438564-48438604)
chr7 (165-228)||(1656657-1656720)
chr7 (149-209)||(11272585-11272647)
chr7 (142-209)||(26733304-26733371)
chr7 (151-210)||(42720891-42720950)
chr7 (149-191)||(1885591-1885633)
chr7 (149-191)||(2334268-2334310)
chr7 (143-189)||(25956465-25956511)
chr7 (140-209)||(20549791-20549860)
chr7 (148-209)||(25822655-25822716)
chr7 (148-228)||(4024008-4024088)
chr7 (149-201)||(6028633-6028685)
chr7 (165-228)||(2424596-2424658)
chr7 (165-200)||(3938152-3938187)
chr7 (149-200)||(12843174-12843225)
chr7 (152-203)||(17851437-17851488)
chr7 (165-200)||(27980805-27980840)
chr7 (141-203)||(1401031-1401093)
chr7 (151-209)||(19206050-19206108)
chr7 (140-198)||(33994223-33994281)
chr7 (151-201)||(38143231-38143281)
chr7 (135-209)||(41020496-41020570)
chr7 (160-209)||(11831432-11831481)
chr7 (142-195)||(18213025-18213078)
chr7 (151-195)||(640127-640171)
chr7 (135-199)||(3554491-3554555)
chr7 (159-191)||(13557750-13557782)
chr7 (151-191)||(17257990-17258030)
chr7 (149-205)||(21930633-21930688)
chr7 (149-189)||(22602709-22602749)
chr7 (165-209)||(29787384-29787428)
chr7 (149-209)||(32308120-32308180)
chr7 (143-195)||(39138458-39138510)
chr7 (145-209)||(40287352-40287415)
[»] chr2 (62 HSPs)
chr2 (140-211)||(2438709-2438780)
chr2 (132-251)||(37558938-37559054)
chr2 (132-206)||(5040735-5040811)
chr2 (132-249)||(38117141-38117261)
chr2 (144-212)||(18255974-18256042)
chr2 (149-252)||(20539673-20539785)
chr2 (132-201)||(15972881-15972950)
chr2 (140-201)||(30404840-30404901)
chr2 (149-214)||(30717529-30717594)
chr2 (149-226)||(44860303-44860380)
chr2 (151-211)||(11223864-11223924)
chr2 (138-209)||(6940255-6940326)
chr2 (140-211)||(18841003-18841074)
chr2 (144-250)||(19536391-19536507)
chr2 (144-209)||(21624266-21624332)
chr2 (149-209)||(974747-974807)
chr2 (145-201)||(18421971-18422027)
chr2 (157-209)||(21374706-21374758)
chr2 (132-191)||(12224241-12224300)
chr2 (132-202)||(5367199-5367269)
chr2 (149-202)||(12668422-12668475)
chr2 (149-202)||(15657871-15657924)
chr2 (144-209)||(20473322-20473387)
chr2 (149-202)||(33153431-33153484)
chr2 (150-207)||(38442309-38442366)
chr2 (152-208)||(18420436-18420492)
chr2 (149-209)||(24894389-24894449)
chr2 (149-209)||(36756343-36756403)
chr2 (151-209)||(14996224-14996283)
chr2 (138-209)||(20242715-20242786)
chr2 (132-191)||(28596487-28596546)
chr2 (150-209)||(30335417-30335476)
chr2 (149-200)||(37419752-37419803)
chr2 (138-189)||(43585993-43586044)
chr2 (156-210)||(12940941-12940995)
chr2 (149-191)||(23058441-23058483)
chr2 (155-209)||(34221502-34221556)
chr2 (140-209)||(31808077-31808146)
chr2 (132-209)||(37411226-37411303)
chr2 (152-201)||(44605141-44605190)
chr2 (165-228)||(18631421-18631485)
chr2 (153-250)||(23717977-23718082)
chr2 (153-250)||(24105649-24105754)
chr2 (165-209)||(28677909-28677953)
chr2 (157-209)||(39323264-39323316)
chr2 (144-203)||(34691799-34691858)
chr2 (144-203)||(34714211-34714270)
chr2 (149-203)||(4882695-4882749)
chr2 (151-209)||(21091723-21091781)
chr2 (151-209)||(42832277-42832335)
chr2 (152-189)||(14450797-14450834)
chr2 (132-201)||(18570980-18571049)
chr2 (149-202)||(18622613-18622666)
chr2 (152-209)||(29176495-29176552)
chr2 (150-187)||(44635520-44635557)
chr2 (164-208)||(1886892-1886936)
chr2 (165-209)||(21616762-21616806)
chr2 (165-209)||(21782833-21782877)
chr2 (162-201)||(29367381-29367421)
chr2 (144-208)||(31018591-31018655)
chr2 (145-189)||(33884071-33884115)
chr2 (149-209)||(34784981-34785041)
[»] chr5 (67 HSPs)
chr5 (132-209)||(21191038-21191115)
chr5 (138-208)||(21576733-21576803)
chr5 (149-250)||(31084279-31084383)
chr5 (139-209)||(6247622-6247692)
chr5 (149-211)||(39698539-39698601)
chr5 (132-209)||(42893360-42893437)
chr5 (149-209)||(21522750-21522810)
chr5 (149-209)||(21533316-21533376)
chr5 (150-209)||(8420027-8420086)
chr5 (157-249)||(15405062-15405160)
chr5 (140-209)||(15883987-15884057)
chr5 (148-209)||(10298569-10298630)
chr5 (149-209)||(7677705-7677765)
chr5 (149-209)||(13287398-13287458)
chr5 (145-209)||(33178025-33178089)
chr5 (149-228)||(6471888-6471967)
chr5 (155-250)||(14674231-14674323)
chr5 (149-237)||(5894832-5894914)
chr5 (148-209)||(41633735-41633796)
chr5 (152-208)||(17177025-17177081)
chr5 (149-209)||(19579701-19579761)
chr5 (149-209)||(21542030-21542090)
chr5 (154-209)||(7218271-7218326)
chr5 (141-208)||(24906292-24906359)
chr5 (151-209)||(21351906-21351964)
chr5 (135-201)||(28588659-28588725)
chr5 (149-253)||(2436875-2436982)
chr5 (140-208)||(30502378-30502446)
chr5 (140-208)||(30542721-30542789)
chr5 (149-209)||(37328843-37328903)
chr5 (153-209)||(43001800-43001856)
chr5 (154-209)||(12159952-12160007)
chr5 (138-209)||(27932235-27932306)
chr5 (151-209)||(30135313-30135372)
chr5 (132-199)||(43564891-43564958)
chr5 (149-248)||(11685898-11685999)
chr5 (150-209)||(15382477-15382538)
chr5 (165-227)||(32766958-32767020)
chr5 (148-209)||(41995471-41995530)
chr5 (140-194)||(42029767-42029821)
chr5 (149-209)||(3966503-3966563)
chr5 (143-206)||(14422907-14422968)
chr5 (145-201)||(17925167-17925223)
chr5 (149-209)||(30183549-30183609)
chr5 (148-212)||(40131618-40131682)
chr5 (140-203)||(23012398-23012461)
chr5 (132-211)||(32630717-32630796)
chr5 (149-191)||(12199948-12199990)
chr5 (149-211)||(22423811-22423873)
chr5 (132-212)||(24273015-24273092)
chr5 (132-212)||(24389122-24389199)
chr5 (140-212)||(6770540-6770610)
chr5 (140-209)||(16203785-16203854)
chr5 (165-250)||(17593737-17593822)
chr5 (140-209)||(18421831-18421900)
chr5 (152-201)||(38749565-38749614)
chr5 (169-212)||(2952265-2952309)
chr5 (149-201)||(16374341-16374393)
chr5 (157-212)||(17088281-17088337)
chr5 (177-209)||(18316952-18316984)
chr5 (149-209)||(18592073-18592133)
chr5 (151-191)||(19167577-19167617)
chr5 (149-209)||(21814261-21814321)
chr5 (161-209)||(22299492-22299539)
chr5 (165-201)||(30098334-30098370)
chr5 (154-198)||(30136678-30136722)
chr5 (149-209)||(41091256-41091316)
[»] chr3 (64 HSPs)
chr3 (145-221)||(51206348-51206424)
chr3 (132-228)||(28917974-28918080)
chr3 (132-250)||(55401025-55401152)
chr3 (132-209)||(10954952-10955029)
chr3 (149-212)||(1509536-1509599)
chr3 (144-251)||(7928409-7928515)
chr3 (149-252)||(14209074-14209173)
chr3 (153-211)||(26508108-26508166)
chr3 (140-238)||(24633391-24633491)
chr3 (149-209)||(27505246-27505306)
chr3 (149-209)||(49651785-49651845)
chr3 (148-250)||(34910279-34910378)
chr3 (149-206)||(14832102-14832159)
chr3 (149-210)||(21256985-21257046)
chr3 (153-209)||(4987294-4987350)
chr3 (149-209)||(34185122-34185182)
chr3 (150-209)||(21479118-21479177)
chr3 (140-235)||(40993325-40993423)
chr3 (140-235)||(20503437-20503534)
chr3 (144-209)||(16000010-16000075)
chr3 (140-209)||(26492195-26492264)
chr3 (149-250)||(28812477-28812575)
chr3 (152-209)||(55212963-55213020)
chr3 (149-209)||(14216892-14216952)
chr3 (149-209)||(14223021-14223081)
chr3 (149-209)||(14829690-14829749)
chr3 (149-209)||(15796293-15796353)
chr3 (149-201)||(39756244-39756296)
chr3 (150-209)||(8587021-8587080)
chr3 (149-228)||(14027988-14028067)
chr3 (138-209)||(35222938-35223009)
chr3 (151-209)||(10268487-10268545)
chr3 (144-201)||(25775516-25775574)
chr3 (149-203)||(25948886-25948940)
chr3 (144-209)||(8383257-8383322)
chr3 (150-210)||(8593135-8593196)
chr3 (156-209)||(35994744-35994796)
chr3 (150-203)||(38731224-38731277)
chr3 (149-209)||(750617-750677)
chr3 (149-209)||(3164024-3164084)
chr3 (148-200)||(8930828-8930880)
chr3 (135-191)||(14338468-14338524)
chr3 (157-208)||(11610522-11610573)
chr3 (166-209)||(14979181-14979224)
chr3 (132-190)||(7171520-7171578)
chr3 (139-209)||(10335275-10335345)
chr3 (149-238)||(14747529-14747622)
chr3 (144-250)||(32400702-32400809)
chr3 (149-207)||(41961649-41961707)
chr3 (138-191)||(3865692-3865745)
chr3 (140-209)||(8789540-8789609)
chr3 (165-210)||(9624640-9624685)
chr3 (145-226)||(13414452-13414533)
chr3 (133-202)||(18426956-18427025)
chr3 (149-209)||(4990966-4991026)
chr3 (139-223)||(7614404-7614488)
chr3 (133-224)||(11251963-11252052)
chr3 (174-235)||(40052304-40052367)
chr3 (156-211)||(34307786-34307841)
chr3 (152-202)||(17005621-17005671)
chr3 (149-214)||(15314875-15314940)
chr3 (150-211)||(33359759-33359820)
chr3 (140-221)||(45451541-45451622)
chr3 (165-197)||(39002044-39002076)
[»] scaffold0223 (1 HSPs)
scaffold0223 (149-252)||(20120-20232)
[»] scaffold0652 (1 HSPs)
scaffold0652 (132-209)||(444-521)
[»] scaffold0053 (1 HSPs)
scaffold0053 (132-209)||(8798-8875)
[»] scaffold0050 (1 HSPs)
scaffold0050 (132-209)||(70278-70355)
[»] scaffold0103 (1 HSPs)
scaffold0103 (158-238)||(51785-51862)
[»] scaffold0011 (1 HSPs)
scaffold0011 (151-211)||(17750-17810)
[»] scaffold0361 (1 HSPs)
scaffold0361 (132-209)||(14530-14604)
[»] scaffold0027 (1 HSPs)
scaffold0027 (150-209)||(46682-46741)
[»] scaffold0722 (1 HSPs)
scaffold0722 (135-209)||(7017-7091)
[»] scaffold0793 (1 HSPs)
scaffold0793 (140-209)||(4871-4943)
[»] scaffold0171 (2 HSPs)
scaffold0171 (149-250)||(23371-23480)
scaffold0171 (149-191)||(23529-23571)
[»] scaffold0136 (1 HSPs)
scaffold0136 (149-201)||(3848-3900)
[»] scaffold0025 (1 HSPs)
scaffold0025 (149-212)||(23766-23830)
[»] scaffold0021 (1 HSPs)
scaffold0021 (153-209)||(130482-130538)
[»] scaffold0004 (3 HSPs)
scaffold0004 (151-208)||(123626-123686)
scaffold0004 (148-197)||(83172-83221)
scaffold0004 (157-209)||(92807-92859)
[»] scaffold0083 (1 HSPs)
scaffold0083 (138-183)||(45518-45563)
[»] scaffold0376 (1 HSPs)
scaffold0376 (148-220)||(6301-6373)
[»] scaffold0122 (1 HSPs)
scaffold0122 (141-209)||(8010-8077)
[»] scaffold0019 (1 HSPs)
scaffold0019 (149-250)||(71679-71785)
[»] scaffold0003 (1 HSPs)
scaffold0003 (149-209)||(241594-241654)
[»] scaffold0306 (1 HSPs)
scaffold0306 (150-209)||(13400-13459)
[»] scaffold0152 (1 HSPs)
scaffold0152 (150-209)||(21868-21927)
[»] scaffold0066 (1 HSPs)
scaffold0066 (162-209)||(33375-33422)
[»] scaffold0018 (1 HSPs)
scaffold0018 (151-209)||(178819-178878)
[»] scaffold0123 (1 HSPs)
scaffold0123 (149-250)||(44524-44628)
[»] scaffold0049 (1 HSPs)
scaffold0049 (151-208)||(63774-63831)
[»] scaffold0512 (1 HSPs)
scaffold0512 (132-172)||(5018-5058)
[»] scaffold0450 (1 HSPs)
scaffold0450 (149-209)||(8634-8694)
[»] scaffold0022 (1 HSPs)
scaffold0022 (149-201)||(99901-99953)
[»] scaffold0020 (1 HSPs)
scaffold0020 (149-209)||(135311-135371)
[»] scaffold0044 (1 HSPs)
scaffold0044 (153-200)||(53189-53236)
[»] scaffold0008 (1 HSPs)
scaffold0008 (149-208)||(263371-263430)
[»] scaffold0057 (1 HSPs)
scaffold0057 (163-209)||(24025-24071)
[»] scaffold0236 (1 HSPs)
scaffold0236 (149-210)||(25767-25828)
[»] scaffold0110 (1 HSPs)
scaffold0110 (152-201)||(28858-28907)
[»] scaffold0036 (1 HSPs)
scaffold0036 (149-202)||(9746-9799)
[»] scaffold0007 (1 HSPs)
scaffold0007 (156-209)||(225274-225327)
[»] scaffold0246 (1 HSPs)
scaffold0246 (158-190)||(19594-19626)


Alignment Details
Target: chr4 (Bit Score: 64; Significance: 7e-28; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 12895115 - 12895211
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtccgtgtccgtatctatgcttcat 248  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| || |    |||||||||||||||||||||||| ||||||||    
T  12895115 acgacaccgacacttgtaattactttgaattatgtgattttttcaaattattagctgtttcgg----cgtgtcgtgtccgtgtccgtatctgtgcttcat 12895210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 54579996 - 54580094
Alignment:
Q  123 ctatgaagatcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtc 221  Q
    ||||||||  |||| ||||||||||| |||||||||||||| |||||||| |||||||||||||||||| |||||||||| ||||||||  ||||||||    
T  54579996 ctatgaagcacggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgtgattttttcaaattattagttgtgtcagcgtccgtgtc 54580094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 23292968 - 23293045
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| ||||||||||| ||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||    
T  23292968 tcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtc 23293045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 132 - 210
Target Start/End: Original strand, 28964230 - 28964308
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtca 210  Q
    ||||||| ||||||||| |||||| |||||||||||||||| |||||||||||||||||| |||||||||||| |||||    
T  28964230 tcggatatgtgtcgtgtccgacacagacacttgtaattacactgaattatgtgattttttcaaattattagctatgtca 28964308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 141 - 209
Target Start/End: Original strand, 31800469 - 31800537
Alignment:
Q  141 tgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||| ||||||||||||||||||||| |||||| | |||||||||||||||||||||||||    
T  31800469 tgtcgtgtacgataccgacacttgtaattacattaaattatttaattttttaaaattattagctgtgtc 31800537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 21945572 - 21945503
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| ||| ||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||    
T  21945572 gtgtcatgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtc 21945503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 29205513 - 29205432
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtc 221  Q
    ||||||||| | ||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||  || ||||||||    
T  29205513 gtgtcgtgtccaacaccgacacttgtaattacactgaattatgtgattttttcaaattattagccgtgttggtgtccgtgtc 29205432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 30299007 - 30298910
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtga-ttttttaaaattattagctgtgtcagtttccgtgtc-gtgtccgtgtccgtatctatgcttc 246  Q
    |||||||||||||||||||||||| |||||||||| | |||||| ||||||||||||||||| |    |||||| |||||||||||||||||| ||||||    
T  30299007 acgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcgg----cgtgtcagtgtccgtgtccgtatctgtgcttc 30298912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 30327875 - 30327778
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtga-ttttttaaaattattagctgtgtcagtttccgtgtc-gtgtccgtgtccgtatctatgcttc 246  Q
    |||||||||||||||||||||||| |||||||||| | |||||| ||||||||||||||||| |    |||||| |||||||||||||||||| ||||||    
T  30327875 acgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcgg----cgtgtcagtgtccgtgtccgtatctgtgcttc 30327780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 49431097 - 49431025
Alignment:
Q  138 acgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgatt-ttttaaaattattagctgtgtc 209  Q
    ||||||||||| |||||||||||||| |||||||| |||||||||||||| |||| |||||||||||||||||    
T  49431097 acgtgtcgtgtccgacaccgacacttttaattacactgaattatgtgatttttttcaaattattagctgtgtc 49431025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 4157218 - 4157133
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtc 226  Q
    ||||||||| |||||||||||||||||||| || | ||||||||||| |||| |||||||||| ||||||||| || ||||||||||    
T  4157218 gtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgat-ttttcaaattattagttgtgtcagtgtctgtgtcgtgtc 4157133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 38846994 - 38847071
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| ||||||||| | |||||| |||||||||||||||| ||||| || ||||||||| |||||||||||||||||    
T  38846994 tcggacacgtgtcgtatccgacactgacacttgtaattacactgaataatatgattttttcaaattattagctgtgtc 38847071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 3947765 - 3947825
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||| |||||||||||||||| ||||||||| |||||||| |||||||||||||||||    
T  3947765 acgacactgacacttgtaattacactgaattatgcgattttttcaaattattagctgtgtc 3947825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 2361967 - 2362034
Alignment:
Q  142 gtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||| |||||||||||||| |||||||| | |||||||| ||||||| |||||||||||||||||    
T  2361967 gtcgtgtccgacaccgacacttttaattacactaaattatgtaattttttcaaattattagctgtgtc 2362034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 11596351 - 11596406
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagct 204  Q
    |||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||    
T  11596351 acgacacctacacttgtaattacactgaattatgtgattttttcaaattattagct 11596406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 24613702 - 24613760
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||| |||||||||||||||||||||| | |||||||||| ||||||    
T  24613702 gacaccgacacttgtacttacattgaattatgtgattttctcaaattattagttgtgtc 24613760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 715595 - 715667
Alignment:
Q  140 gtgtcgtgtac--gacaccgacacttgtaattacattgaattatgtga-ttttttaaaattattagctgtgtc 209  Q
    |||||||||||  |||||| ||||||||||||||| |||||||||||| |||||| |||||||||||||||||    
T  715595 gtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgattttttttaaattattagctgtgtc 715667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 752921 - 752993
Alignment:
Q  140 gtgtcgtgtac--gacaccgacacttgtaattacattgaattatgtga-ttttttaaaattattagctgtgtc 209  Q
    |||||||||||  |||||| ||||||||||||||| |||||||||||| |||||| |||||||||||||||||    
T  752921 gtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgattttttttaaattattagctgtgtc 752993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 132 - 201
Target Start/End: Original strand, 12895256 - 12895325
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    |||||||| |||||||| |||||||||||||| ||||||||   |||||||||||||||| |||||||||    
T  12895256 tcggatacatgtcgtgtccgacaccgacacttataattacacaaaattatgtgattttttcaaattatta 12895325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 28084582 - 28084521
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgatt-ttttaaaattattagctgtgtc 209  Q
    ||||||| ||||||||||||||||||||||||||||||| |||| ||||| |||||||||||    
T  28084582 acgacacagacacttgtaattacattgaattatgtgatttttttcaaattcttagctgtgtc 28084521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 209
Target Start/End: Original strand, 8423709 - 8423777
Alignment:
Q  141 tgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||| ||||||||||| || |||||||| |||||||||||||||| | ||||||||||| |||||    
T  8423709 tgtcgtgtccgacaccgacatttataattacactgaattatgtgattttctcaaattattagcggtgtc 8423777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 12797331 - 12797378
Alignment:
Q  143 tcgtgtacgacaccgacacttgtaattacattgaattatgtgattttt 190  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||    
T  12797331 tcgtgtccgacaccgacacttgtaattacactgaattatgtgattttt 12797378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 191
Target Start/End: Complemental strand, 42640594 - 42640547
Alignment:
Q  144 cgtgtacgacaccgacacttgtaattacattgaattatgtgatttttt 191  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  42640594 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttttt 42640547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 6485613 - 6485662
Alignment:
Q  152 acaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    ||||||||||||||||||||| | |||||||||||||||| |||||||||    
T  6485613 acaccgacacttgtaattacactaaattatgtgattttttcaaattatta 6485662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 14465088 - 14465133
Alignment:
Q  163 tgtaattacattgaattatgtgattttttaaaattattagctgtgt 208  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||    
T  14465088 tgtaattacattgaattatgtgattttttcaaattattaggtgtgt 14465133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 18844491 - 18844548
Alignment:
Q  168 ttacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgt 225  Q
    ||||||||| |||||||||||||| ||||||||  |||||||||||||||||| ||||    
T  18844491 ttacattgagttatgtgattttttcaaattattttctgtgtcagtttccgtgttgtgt 18844548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 34306786 - 34306862
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| ||||||||||| ||||||||||||||||||||||| |  ||||| ||| ||||| |||||||||| ||||||    
T  34306786 tcggacacgtgtcgtgtccgacaccgacacttgtaattacactacattatctga-tttttcaaattattagttgtgtc 34306862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 252
Target Start/End: Complemental strand, 37203315 - 37203220
Alignment:
Q  158 acacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtc--gtgtccgtgtccgtatctatgcttcataggt 252  Q
    ||||||||||||||| | |||||||| ||||||| ||||||||||| ||||| || | ||||||  |||||||||||| ||||  ||||||||||||    
T  37203315 acacttgtaattacactaaattatgtcattttttcaaattattagccgtgtctgtgt-cgtgtccggtgtccgtgtccatatccgtgcttcataggt 37203220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 19482728 - 19482668
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||| |||||||||||||||  |||||||||||| |||| |||||||||| ||||||    
T  19482728 acgacaccaacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtc 19482668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 51701318 - 51701258
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||  ||||||||||||||| | |||||||| ||||||| |||||||||||||||||    
T  51701318 acgacactaacacttgtaattacactcaattatgtaattttttcaaattattagctgtgtc 51701258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 11651142 - 11651193
Alignment:
Q  158 acacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||| || || |||||||||||||||||| |||||||||||||||||    
T  11651142 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtc 11651193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 13307948 - 13307897
Alignment:
Q  138 acgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgatttt 189  Q
    ||||||||||| ||||||| |||||||| ||||||||||||||||| |||||    
T  13307948 acgtgtcgtgtccgacaccaacacttgtgattacattgaattatgtcatttt 13307897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 190
Target Start/End: Complemental strand, 16073460 - 16073413
Alignment:
Q  143 tcgtgtacgacaccgacacttgtaattacattgaattatgtgattttt 190  Q
    |||||| ||||||||||||||||||||||| ||||||||| |||||||    
T  16073460 tcgtgtccgacaccgacacttgtaattacactgaattatgcgattttt 16073413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 28000743 - 28000794
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgatt-ttttaaaattatta 201  Q
    |||||||||||||||||||||| |||||||| ||||| ||||||||||||||    
T  28000743 gacaccgacacttgtaattacactgaattatatgattattttaaaattatta 28000794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 238
Target Start/End: Complemental strand, 50280943 - 50280850
Alignment:
Q  149 acgacaccgacacttgtaattacat--tgaattatgtgattttttaaaattattagctgtgtc--agtttccgtgtcgtgtccgtgtccgtatc 238  Q
    ||||||||| ||||||||||||||   | |||||||||| ||||| |||||||||||||||||   || ||||||||||||  |||||||||||    
T  50280943 acgacaccggcacttgtaattacacacttaattatgtgaatttttcaaattattagctgtgtcggcgtgtccgtgtcgtgttagtgtccgtatc 50280850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 190
Target Start/End: Complemental strand, 4157505 - 4157455
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttt 190  Q
    ||||||||| |||||||||||||||||||| || | |||||||||||||||    
T  4157505 gtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgattttt 4157455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 6879459 - 6879505
Alignment:
Q  144 cgtgtacgacaccgacacttgtaattacattgaattatgtgattttt 190  Q
    ||||| ||||||||||||||||||||||| | |||||||||||||||    
T  6879459 cgtgtccgacaccgacacttgtaattacacttaattatgtgattttt 6879505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 21873386 - 21873448
Alignment:
Q  165 taattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtcc 227  Q
    ||||| || |||||||||||||||| | |||||||| || |||||||| ||||||||||||||    
T  21873386 taatttcactgaattatgtgattttatcaaattatttgcagtgtcagtgtccgtgtcgtgtcc 21873448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 21929247 - 21929309
Alignment:
Q  165 taattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtcc 227  Q
    ||||| || |||||||||||||||| | |||||||| || |||||||| ||||||||||||||    
T  21929247 taatttcactgaattatgtgattttatcaaattatttgcagtgtcagtgtccgtgtcgtgtcc 21929309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 35157975 - 35158037
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattag 202  Q
    |||||||||  ||||||||||||| |||||||| | |||||||||||||||  ||||||||||    
T  35157975 gtgtcgtgtcagacaccgacacttataattacactaaattatgtgatttttccaaattattag 35158037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 12708207 - 12708146
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgatttttt-aaaattattagctgtgtc 209  Q
    |||||| ||||||||||||||||| |||||||| | ||||||| ||||||||||| ||||||    
T  12708207 acgacatcgacacttgtaattacactgaattatttcattttttaaaaattattagttgtgtc 12708146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 40179626 - 40179687
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    ||||||||| |||||||||| | | |||||||| |||||||||||||||||| ||| |||||    
T  40179626 gtgtcgtgtccgacaccgacgcatataattacactgaattatgtgattttttcaaactatta 40179687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 848009 - 847957
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaattattagc 203  Q
    |||||||||||||||||||| | |||||||||| ||||| | |||||||||||    
T  848009 gacaccgacacttgtaattatagtgaattatgtaattttctcaaattattagc 847957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 27706176 - 27706228
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    |||||||  ||||||||||||||| | |||||||||||||||| |||||||||    
T  27706176 acgacactcacacttgtaattacactaaattatgtgatttttttaaattatta 27706228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 220
Target Start/End: Complemental strand, 35161113 - 35161025
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgt 220  Q
    ||||| ||||||||||| |||| | || |||| |||||||| |||||||||||||||| |  ||||| |||| ||||| || |||||||    
T  35161113 tcggacacgtgtcgtgtccgactctgatacttataattacactgaattatgtgattttcttgaattagtagcagtgtcggtgtccgtgt 35161025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 15029824 - 15029765
Alignment:
Q  150 cgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||| |||| | |||||||| ||||||||||||| |||| ||||||||||| |||||    
T  15029824 cgacaccaacacatataattacactgaattatgtgatattttcaaattattagcagtgtc 15029765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 20633535 - 20633485
Alignment:
Q  156 cgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||||||||||||||   |||||| ||||||||||| |||||    
T  20633535 cgacacttgtaattacattgaattatg---ttttttcaaattattagcggtgtc 20633485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 30982877 - 30982931
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagc 203  Q
    ||||||||||||||| |||||||| |||| ||||||||||| | |||| ||||||    
T  30982877 acgacaccgacacttataattacactgaaatatgtgattttctcaaatcattagc 30982931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 203
Target Start/End: Original strand, 32915621 - 32915658
Alignment:
Q  165 taattacattgaattatgtgattttttaaaattattagc 203  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  32915621 taattacattgaattatgtgatttttt-aaattattagc 32915658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 209
Target Start/End: Original strand, 35723382 - 35723444
Alignment:
Q  148 tacgacaccgacacttgtaattacattgaattatgtg-attttttaaaattattagctgtgtc 209  Q
    |||||||| ||||| | |||||||||||||||||||| ||||| | ||||||||||| |||||    
T  35723382 tacgacactgacacatataattacattgaattatgtgtattttctcaaattattagcggtgtc 35723444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 37496761 - 37496680
Alignment:
Q  152 acaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtca--gtttccgtgtcgtgtccgtgt 231  Q
    |||||||||||||| ||||||||||||||||| ||||| | |||  |||| | ||||||  || || |||||||||||||||    
T  37496761 acaccgacacttgtgattacattgaattatgtcattttctcaaaaaattatcggtgtcaacgtgtcagtgtcgtgtccgtgt 37496680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 203
Target Start/End: Complemental strand, 40774325 - 40774287
Alignment:
Q  165 taattacattgaattatgtgattttttaaaattattagc 203  Q
    ||||||||||||||||| ||||||| |||||||||||||    
T  40774325 taattacattgaattatctgattttataaaattattagc 40774287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 44362740 - 44362686
Alignment:
Q  135 gatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgatttt 189  Q
    ||||||||||||||  |||||| |||||||| |||||||| |||||||| |||||    
T  44362740 gatacgtgtcgtgtctgacaccaacacttgtgattacattaaattatgtcatttt 44362686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 251
Target Start/End: Complemental strand, 46160886 - 46160852
Alignment:
Q  217 gtgtcgtgtccgtgtccgtatctatgcttcatagg 251  Q
    |||||||||||||||||||||| ||||||||||||    
T  46160886 gtgtcgtgtccgtgtccgtatccatgcttcatagg 46160852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 209
Target Start/End: Complemental strand, 47264044 - 47263986
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||| ||||| |||||||||||  ||||||||||||||||  |||||||||||| ||||    
T  47264044 gacatcgacatttgtaattacacagaattatgtgatttttacaaattattagctatgtc 47263986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 190
Target Start/End: Complemental strand, 4383427 - 4383386
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttt 190  Q
    ||||||| |||| ||||||||||| |||||||||||||||||    
T  4383427 acgacactgacatttgtaattacactgaattatgtgattttt 4383386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 24544038 - 24543981
Alignment:
Q  153 caccgacacttgtaattacattgaattatgtg-attttttaaaattattagctgtgtc 209  Q
    |||||||||||||||||||| || |||| ||| ||||||| |||||||||| ||||||    
T  24544038 caccgacacttgtaattacaatgcattaagtgtatttttttaaattattagttgtgtc 24543981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 13117493 - 13117449
Alignment:
Q  145 gtgtacgacaccgacacttgtaattacattgaattatgtgatttt 189  Q
    |||| |||||||||||||||| ||||||||||||| ||| |||||    
T  13117493 gtgtccgacaccgacacttgtgattacattgaattttgtcatttt 13117449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 16303265 - 16303317
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    |||||||||||||||||||||||| | |||||| | ||||||| ||| |||||    
T  16303265 acgacaccgacacttgtaattacactaaattatatcattttttcaaaatatta 16303317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 33950194 - 33950142
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaattattagc 203  Q
    ||||||||||| | | |||||||| |||||||||||||| | |||||||||||    
T  33950194 gacaccgacacatatgattacattaaattatgtgattttctcaaattattagc 33950142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 190
Target Start/End: Complemental strand, 40481687 - 40481655
Alignment:
Q  158 acacttgtaattacattgaattatgtgattttt 190  Q
    ||||||||||||||| |||||||||||||||||    
T  40481687 acacttgtaattacactgaattatgtgattttt 40481655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 3e-27; HSPs: 80)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 138 - 228
Target Start/End: Complemental strand, 28715366 - 28715276
Alignment:
Q  138 acgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtccg 228  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||||||||| |||||||| ||||| |||||||||    
T  28715366 acgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagccgtgtcagtgtccgtatcgtgtccg 28715276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 251
Target Start/End: Original strand, 17841571 - 17841687
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtc-gtgtccgtg 230  Q
    ||||| || |||||||| |||||||| |||||||||||||| | |||||||||||||||| ||||||||||||||||| |    |||||| |||||||||    
T  17841571 tcggacacatgtcgtgtccgacaccgtcacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcgg----cgtgtcagtgtccgtg 17841666  T
Q  231 tccgtatctatgcttcatagg 251  Q
    ||||||||  |||||||||||    
T  17841667 tccgtatcagtgcttcatagg 17841687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 34595205 - 34595134
Alignment:
Q  138 acgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||    
T  34595205 acgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtc 34595134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 16766757 - 16766697
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  16766757 acgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 16766697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 12696384 - 12696277
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctg--------tgtcagtttccgtgtcgtgtccgtgtccgtatcta 240  Q
    ||||||| |||||||||||||||| |||||||||| ||||||| |||||||||||||        ||||||| |||||||||||||||||||||||||      
T  12696384 acgacactgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgtgtccgtatccg 12696285  T
Q  241 tgcttcat 248  Q
    ||||||||    
T  12696284 tgcttcat 12696277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 426508 - 426573
Alignment:
Q  144 cgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||    
T  426508 cgtgtccgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtc 426573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 28152175 - 28152099
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||| |||||||||||| ||||    
T  28152175 tcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgat-ttttcaaattattagctttgtc 28152099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 7977825 - 7977889
Alignment:
Q  145 gtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||| ||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||    
T  7977825 gtgtccgacaccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtc 7977889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 9107369 - 9107429
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||    
T  9107369 acgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtc 9107429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 10770673 - 10770732
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgt 208  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||    
T  10770673 acgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgt 10770732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 33001277 - 33001348
Alignment:
Q  138 acgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||| |||||||||||| | |||||||||| |||||||||||||||| ||||||||||| |||||    
T  33001277 acgtgtcgtgtccgacaccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtc 33001348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 139 - 209
Target Start/End: Original strand, 8776962 - 8777032
Alignment:
Q  139 cgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||| ||||||| ||||||||||||||| |||||| ||||||||||| |||||||||| ||||||    
T  8776962 cgtgtcgtgtccgacaccaacacttgtaattacactgaattttgtgattttttcaaattattagttgtgtc 8777032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 9911527 - 9911587
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattt-tttaaaattattagctgtgt 208  Q
    |||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||    
T  9911527 acgacaccgacacttgtaattacactgaattatgtgatttcttttaaattattagctgtgt 9911587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 149 - 252
Target Start/End: Original strand, 5970107 - 5970219
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc--agtttccgtgtc-------gtgtccgtgtccgtatct 239  Q
    |||||||| ||| ||||||||||| |||||||||||||||||| ||||||||| |||||||   || ||||||||       ||||||||||||||||||    
T  5970107 acgacacccacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcgacgtgtccgtgtcatgtccggtgtccgtgtccgtatct 5970206  T
Q  240 atgcttcataggt 252  Q
     ||||||||||||    
T  5970207 gtgcttcataggt 5970219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 150 - 209
Target Start/End: Original strand, 7801156 - 7801215
Alignment:
Q  150 cgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||||| ||||||    
T  7801156 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtc 7801215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 4878012 - 4877942
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtga-ttttttaaaattattagctgtgtc 209  Q
    ||||||||| ||||||||||||||||||||| | | |||||||||| |||||| |||||||||||||||||    
T  4878012 gtgtcgtgtccgacaccgacacttgtaattatacttaattatgtgacttttttcaaattattagctgtgtc 4877942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 9522948 - 9522898
Alignment:
Q  152 acaccgacacttgtaattacattgaattatgtgattttttaaaattattag 202  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  9522948 acaccgacacttgtaattacactgaattatgtgatttttttaaattattag 9522898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 15489733 - 15489791
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||||||||||||||||||| ||| ||||||| |||||||||| ||||||    
T  15489733 gacaccgacacttgtaattacattgaattgtgtaattttttcaaattattagttgtgtc 15489791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 209
Target Start/End: Complemental strand, 16833378 - 16833308
Alignment:
Q  139 cgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||   ||||||||||||||||||||| |||| ||||||||||||| |||||||||| ||||||    
T  16833378 cgtgtcgtgtctaacaccgacacttgtaattacactgaagtatgtgattttttcaaattattagttgtgtc 16833308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 250
Target Start/End: Complemental strand, 17302609 - 17302518
Alignment:
Q  157 gacacttgtaattacattgaattatgtgatt-ttttaaaattattagctgtgtcagtttccgtgtc-gtgtccgtgtccgtatctatgcttcatag 250  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||    |||||| |||| |||||||||||||  |||||||||    
T  17302609 gacacttgtaattacattgaattatgtgatttttttcaaattattagttgtgtcag----cgtgtcagtgttcgtgtccgtatctgcgcttcatag 17302518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 24645558 - 24645480
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgatt-ttttaaaattattagctgtgtc 209  Q
    ||||| |||||||||||  ||||||||||||||||| || | |||||||||||||| |||| |||||||||||||||||    
T  24645558 tcggacacgtgtcgtgtctgacaccgacacttgtaactatactgaattatgtgatttttttcaaattattagctgtgtc 24645480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 32978889 - 32978959
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtg-attttttaaaattattagctgtgtc 209  Q
    ||||||||| ||||||||||||||||||||||| | |||||||||  |||||| |||||||||||||||||    
T  32978889 gtgtcgtgtccgacaccgacacttgtaattacacttaattatgtgttttttttcaaattattagctgtgtc 32978959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 403858 - 403938
Alignment:
Q  144 cgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgt 225  Q
    ||||| ||||||||||||||||| ||||| | |||||||||||||||| ||||||||| |||||||| | ||||| ||||||    
T  403858 cgtgtccgacaccgacacttgtagttacactaaattatgtgattttttcaaattatta-ctgtgtcaatgtccgtatcgtgt 403938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 853841 - 853918
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| || |||||| | |||||||||||||||||||| || | |||||||||||||||| |||||||||| ||||||    
T  853841 tcggacacatgtcgtatccgacaccgacacttgtaattgcacttaattatgtgattttttcaaattattagttgtgtc 853918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 1191682 - 1191759
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| ||| ||||||| | ||| ||||||||||||||||| |||||| ||||| ||||| |||||||||||||||||    
T  1191682 tcggacacgcgtcgtgtccaacatcgacacttgtaattacactgaattttgtgaatttttcaaattattagctgtgtc 1191759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 7378056 - 7377979
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||| | |||||||| |||||||||||| | ||||||||||||||||||||||||| | ||||| ||||| |||||    
T  7378056 tcggatgcatgtcgtgtccgacaccgacacatataattacattgaattatgtgattttctcaaatttttagcggtgtc 7377979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 31384980 - 31384927
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattag 202  Q
    ||||||| |||||||||||||||| |||||||||||||||||| ||||||||||    
T  31384980 acgacactgacacttgtaattacactgaattatgtgattttttcaaattattag 31384927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 31959213 - 31959111
Alignment:
Q  155 ccgacacttgtaattacattgaattatgtgattttttaaaattattagct--------gtgtcagtttccgtgtcgtgtccgtgtccgtatctatgcttc 246  Q
    |||||||||||||||||| || ||||||||||||||| ||||||||||||        |||||||| | |||||| ||||||||||||||||  ||||||    
T  31959213 ccgacacttgtaattacactgcattatgtgattttttcaaattattagctgtgacggcgtgtcagtgttcgtgtcatgtccgtgtccgtatccgtgcttc 31959114  T
Q  247 ata 249  Q
    |||    
T  31959113 ata 31959111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 8365518 - 8365578
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||||||||||||||  |||||||||||| |||| |||||||||| ||||||    
T  8365518 acgacaccgacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtc 8365578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 17435250 - 17435199
Alignment:
Q  158 acacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||| ||||    
T  17435250 acacttgtaattacactgaattatgtaattttttaaaattattagctatgtc 17435199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 151 - 209
Target Start/End: Complemental strand, 7938174 - 7938116
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||| |||||||| | |||||| ||||||||| |||||||||||||||||    
T  7938174 gacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtc 7938116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 32511657 - 32511727
Alignment:
Q  141 tgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcag 211  Q
    |||||| | ||||||| |||||| |||||||| |||||||||||||||| | ||||||||||| |||||||    
T  32511657 tgtcgtatccgacaccaacacttataattacactgaattatgtgattttcttaaattattagcggtgtcag 32511727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 1681811 - 1681758
Alignment:
Q  156 cgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||||||| ||||||| |||||||||| |||||||||| ||||||    
T  1681811 cgacacttgtaattacactgaattacgtgattttttcaaattattagttgtgtc 1681758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 250
Target Start/End: Complemental strand, 2117129 - 2117034
Alignment:
Q  156 cgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc--agtttccgtgtcgtgtccgtgtccgtatctatgcttcatag 250  Q
    |||||||| ||||| ||||||||||||||||||||| ||||||||||  |||||  ||| ||||| |||||| ||||||||| ||  ||||||||||    
T  2117129 cgacacttataattgcattgaattatgtgattttttcaaattattagaggtgtcggagtgtccgtatcgtgt-cgtgtccgtctccgtgcttcatag 2117034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 19040421 - 19040352
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||| |||||| ||||| | |||||||| |||||||||||||||| | ||||||||||| |||||    
T  19040421 gtgtcgtgtccgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtc 19040352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 3209441 - 3209381
Alignment:
Q  150 cgacaccgacacttgtaattacattgaattatgtgatt-ttttaaaattattagctgtgtc 209  Q
    ||||||||||||||||||| ||| | |||||||||||| |||| |||||||||||||||||    
T  3209441 cgacaccgacacttgtaataacactaaattatgtgatttttttcaaattattagctgtgtc 3209381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 6898274 - 6898342
Alignment:
Q  143 tcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcag 211  Q
    |||||| ||||||||||||||||||||||| | |||||||| |||| || ||||||||||  |||||||    
T  6898274 tcgtgtccgacaccgacacttgtaattacacttaattatgtaatttgttcaaattattagacgtgtcag 6898342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 9025493 - 9025553
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||| | |||||||| |||||||||||||||| | ||||||||||| |||||    
T  9025493 acgacaccgacacatataattacactgaattatgtgattttctcaaattattagcagtgtc 9025553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 9617494 - 9617442
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    ||||||||||||| | ||||||||||||||||||||||||| | |||||||||    
T  9617494 acgacaccgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 30851671 - 30851602
Alignment:
Q  138 acgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||| |||||||||||| | ||||||||||||||  ||||||||| | ||||||||||| |||||    
T  30851671 acgtgtcgtgtccgacaccgacacatataattacattgaat--tgtgattttcttaaattattagcagtgtc 30851602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 4118341 - 4118384
Alignment:
Q  158 acacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    ||||||||||||||||| |||||||||||||||| |||||||||    
T  4118341 acacttgtaattacatttaattatgtgattttttcaaattatta 4118384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 7265588 - 7265651
Alignment:
Q  145 gtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgt 208  Q
    |||| |||||||||||| | |||||||| |||||||||||||||| | ||||||||||| ||||    
T  7265588 gtgtccgacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgt 7265651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 9629442 - 9629383
Alignment:
Q  150 cgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||| | ||||||||||||||||||||||||| | |||||||| || |||||    
T  9629442 cgacaccgacacatataattacattgaattatgtgattttctcaaattattggcggtgtc 9629383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 1700416 - 1700362
Alignment:
Q  145 gtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattat 199  Q
    |||| |||||||||||||| |||||||| |||| ||||||||||||| |||||||    
T  1700416 gtgtccgacaccgacacttataattacactgaaatatgtgatttttttaaattat 1700362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 251
Target Start/End: Original strand, 5626686 - 5626799
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc--agtttccgtgtcgtgtccgtgtccgtat 237  Q
    ||||||||| |||||||||||| | || ||||| |||| || |||||||| |||||  ||||| ||||||   || || |||||||||||||||||||||    
T  5626686 gtgtcgtgtccgacaccgacacatatatttacactgaactaagtgattttctaaaaaaattagttgtgtcggcgtgtcagtgtcgtgtccgtgtccgtat 5626785  T
Q  238 ctatgcttcatagg 251  Q
    |  |||| ||||||    
T  5626786 ccgtgctgcatagg 5626799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 211
Target Start/End: Original strand, 24115862 - 24115908
Alignment:
Q  165 taattacattgaattatgtgattttttaaaattattagctgtgtcag 211  Q
    |||||| |||||||||||||||||||| |||||||||| ||||||||    
T  24115862 taattatattgaattatgtgattttttgaaattattagttgtgtcag 24115908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 250
Target Start/End: Complemental strand, 3398678 - 3398569
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctg--------tgtcagtttccgtgtcgtgtccg-tgtccgtatct 239  Q
    |||||||||| |||| |||||||| |||||||| |||||||| ||| ||||||||||        ||||||| |||||||||||| || ||||||||||     
T  3398678 acgacaccgatacttataattacactgaattatatgatttttcaaa-ttattagctgtgtcggcgtgtcagtgtccgtgtcgtgttcgatgtccgtatcc 3398580  T
Q  240 atgcttcatag 250  Q
    |||||||||||    
T  3398579 atgcttcatag 3398569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 8714040 - 8713979
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgatt-ttttaaaattattagctgtgtc 209  Q
    |||||||| ||| ||||||||||| |||||||||||||| |||| ||||||||| |||||||    
T  8714040 acgacacccacatttgtaattacactgaattatgtgatttttttcaaattattaactgtgtc 8713979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 23771655 - 23771579
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| || |||||||| ||||||||||| ||||||||||| |||| ||| | ||||||| ||||||||| |||||||    
T  23771655 tcggacacatgtcgtgtccgacaccgacatttgtaattacactgaagtatataatttttt-aaattattaactgtgtc 23771579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 25010212 - 25010261
Alignment:
Q  160 acttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||| ||  |||||||||||||||||| |||||||||||||||||    
T  25010212 acttgtaataacgctgaattatgtgattttttcaaattattagctgtgtc 25010261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 30866149 - 30866202
Alignment:
Q  155 ccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgt 208  Q
    ||||||| | ||||||||||||||||||||||||| | ||||||||||| ||||    
T  30866149 ccgacacatataattacattgaattatgtgattttctcaaattattagcggtgt 30866202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 6214622 - 6214566
Alignment:
Q  147 gtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagc 203  Q
    ||||||||||||||| | |||||||| | ||||||||| ||||||||||||| ||||    
T  6214622 gtacgacaccgacacatctaattacacttaattatgtgtttttttaaaattactagc 6214566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 7930365 - 7930313
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    |||||||||||||||| |||| || | |||||||||||||||| |||||||||    
T  7930365 acgacaccgacacttgaaatttcactaaattatgtgattttttcaaattatta 7930313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 19369877 - 19369837
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgatttt 189  Q
    ||||||||||||||||| ||||||||||||||||| |||||    
T  19369877 acgacaccgacacttgtgattacattgaattatgtcatttt 19369837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 26402673 - 26402721
Alignment:
Q  143 tcgtgtacgacaccgacacttgtaattacattgaattatgtgatttttt 191  Q
    |||||| |||||||||||||||| |||||| |||||||||| |||||||    
T  26402673 tcgtgtccgacaccgacacttgtgattacactgaattatgtcatttttt 26402721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 162 - 205
Target Start/End: Complemental strand, 2224273 - 2224230
Alignment:
Q  162 ttgtaattacattgaattatgtgattttttaaaattattagctg 205  Q
    ||||||||||| |||||||| ||||||||| |||||||||||||    
T  2224273 ttgtaattacactgaattatatgatttttttaaattattagctg 2224230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 189
Target Start/End: Original strand, 6751882 - 6751921
Alignment:
Q  150 cgacaccgacacttgtaattacattgaattatgtgatttt 189  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  6751882 cgacaccgacacttgtgattacattgaattatgtcatttt 6751921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 9658950 - 9658879
Alignment:
Q  138 acgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||   |||||||||  | |||||||| |||||||||||||||| | ||||||||||| |||||    
T  9658950 acgtgtcgtgtctaacaccgacaaatataattacactgaattatgtgattttcttaaattattagcggtgtc 9658879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 209
Target Start/End: Original strand, 20371110 - 20371169
Alignment:
Q  150 cgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||| | |||| ||||||| |||||||||||| | ||||||||||| |||||    
T  20371110 cgacaccgacacatataatcacattgagttatgtgattttctcaaattattagcggtgtc 20371169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 21395307 - 21395365
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgt 208  Q
    |||||||||||||||||||||||| | |||||||| ||||| | ||||||||||| ||||    
T  21395307 acgacaccgacacttgtaattacactaaattatgt-attttctcaaattattagcggtgt 21395365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 31429004 - 31429059
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtga-ttttttaaaattattagctg 205  Q
    |||||| ||| ||||||||||| |||||||||||| |||||| |||||||||||||    
T  31429004 gacacctacatttgtaattacactgaattatgtgattttttttaaattattagctg 31429059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 183
Target Start/End: Original strand, 785454 - 785488
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgt 183  Q
    ||||||||||||||||| |||||||||||||||||    
T  785454 acgacaccgacacttgtgattacattgaattatgt 785488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 181
Target Start/End: Original strand, 16388206 - 16388248
Alignment:
Q  139 cgtgtcgtgtacgacaccgacacttgtaattacattgaattat 181  Q
    |||| ||||| ||||||||||||||||||||||| ||||||||    
T  16388206 cgtgccgtgtccgacaccgacacttgtaattacactgaattat 16388248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 31579217 - 31579276
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    ||||||||| |||||||||||| |  ||||||| |||||||||||||||| | |||||||||    
T  31579217 gtgtcgtgtccgacaccgacacat--aattacactgaattatgtgattttctcaaattatta 31579276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 211
Target Start/End: Original strand, 32320668 - 32320730
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcag 211  Q
    |||||||||| || | |||| |||||||||||||||||||| | ||||||||| | |||||||    
T  32320668 acgacaccgatacatataatgacattgaattatgtgattttatcaaattattaacggtgtcag 32320730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 7027301 - 7027260
Alignment:
Q  150 cgacaccgacacttgtaattacattgaattatgtgatttttt 191  Q
    |||||||||||| | |||||||| ||||||||||||||||||    
T  7027301 cgacaccgacacatataattacactgaattatgtgatttttt 7027260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 7151472 - 7151419
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattag 202  Q
    |||||||| |||| | |||||||| | |||||||||||||||| ||||||||||    
T  7151472 acgacaccaacacatataattacacttaattatgtgattttttcaaattattag 7151419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 7973714 - 7973665
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaatta 198  Q
    ||||||||||||||| |||||||| | |||||||| ||||||| ||||||    
T  7973714 acgacaccgacacttataattacacttaattatgtaatttttttaaatta 7973665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 27904037 - 27904097
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtg--attttttaaaattattagctgtgtc 209  Q
    |||||||||| ||||||||||| |||||||||||   |||||| |||||||||||| ||||    
T  27904037 gacaccgacatttgtaattacactgaattatgtgttttttttttaaattattagctatgtc 27904097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 32299332 - 32299283
Alignment:
Q  152 acaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    |||||||||| | ||| ||||||||||||||||||||| | |||||||||    
T  32299332 acaccgacacgtataactacattgaattatgtgattttctcaaattatta 32299283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 1334727 - 1334687
Alignment:
Q  143 tcgtgtacgacaccgacacttgtaattacattgaattatgt 183  Q
    |||||| ||||||||||| |||| |||||||||||||||||    
T  1334727 tcgtgttcgacaccgacatttgtgattacattgaattatgt 1334687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 6327518 - 6327578
Alignment:
Q  150 cgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtca 210  Q
    ||||| ||||||||||||||||| | |||||| | ||||||| ||||||||| || |||||    
T  6327518 cgacatcgacacttgtaattacacttaattatataattttttcaaattattaactatgtca 6327578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 9027238 - 9027178
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||| | ||||||||  ||||||||||||| | | ||||||||||| |||||    
T  9027238 acgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtc 9027178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 209
Target Start/End: Original strand, 12868671 - 12868734
Alignment:
Q  141 tgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||| ||||||||||||| ||||||| ||||     ||||||||||| ||||||||| |||||||    
T  12868671 tgtcgtgtccgacaccgacactagtaattatattg-----tgtgattttttcaaattattaactgtgtc 12868734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 14155239 - 14155315
Alignment:
Q  150 cgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtc 226  Q
    ||||||| |||| |||||| ||| || ||||||||||||| | ||||||| | | |||||||| || ||||||||||    
T  14155239 cgacaccaacacatgtaatcacactgtattatgtgattttctcaaattatgatcggtgtcagtgtctgtgtcgtgtc 14155315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 16488589 - 16488649
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||| | |||||||| || ||| ||||||||| |||||  ||||||||||||    
T  16488589 acgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtc 16488649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 17341671 - 17341715
Alignment:
Q  157 gacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    ||||||| |||||||| |||||||||||||||| | |||||||||    
T  17341671 gacacttataattacactgaattatgtgattttatcaaattatta 17341715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 18367896 - 18367836
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||| | |||||||| || ||| ||||||||| |||||  ||||||||||||    
T  18367896 acgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtc 18367836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 21924930 - 21924994
Alignment:
Q  145 gtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||| |||||||||||| | |||||||| |||||||| |||| || | ||||||||||| |||||    
T  21924930 gtgtccgacaccgacacatataattacactgaattatttgatattctcaaattattagcagtgtc 21924994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 26562749 - 26562689
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||| |||||| | |||||||| |||||||||||||||| | ||||| ||||| |||||    
T  26562749 acgacatcgacacatataattacactgaattatgtgattttctcaaatttttagcagtgtc 26562689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 3e-27; HSPs: 91)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 132 - 250
Target Start/End: Complemental strand, 51410102 - 51409981
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgatt-ttttaaaattattagctgtgtcag--tttccgtgtcgtgtccg 228  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||| |||||||||| |||||| |  | ||||| | |||||||    
T  51410102 tcggatacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagatgtgtcggcatgtccgttttgtgtccg 51410003  T
Q  229 tgtccgtatctatgcttcatag 250  Q
    ||||||||||  ||||||||||    
T  51410002 tgtccgtatccgtgcttcatag 51409981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 38078651 - 38078720
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  38078651 gtgtcgtgtccgacaccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtc 38078720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 22515869 - 22515946
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||| ||||||||| ||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||    
T  22515869 tcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 22515946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 149 - 250
Target Start/End: Original strand, 24577185 - 24577289
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtca--gtttccgtgtcgtg-tccgtgtccgtatctatgctt 245  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||  || ||||||||||| || |||||||||||  |||||    
T  24577185 acgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcagcgtgtccgtgtcgtgttcagtgtccgtatccgtgctt 24577284  T
Q  246 catag 250  Q
    |||||    
T  24577285 catag 24577289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 132 - 249
Target Start/End: Original strand, 46348365 - 46348479
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtc-gtgtccgtg 230  Q
    ||||| ||||||||||| ||||||||||||||||||||||| | |||||| ||||||||| ||||||||||||||||| |    |||||| |||||||||    
T  46348365 tcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgg----cgtgtcagtgtccgtg 46348460  T
Q  231 tccgtatctatgcttcata 249  Q
    ||||||||  |||||||||    
T  46348461 tccgtatccgtgcttcata 46348479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 132 - 228
Target Start/End: Original strand, 18190090 - 18190186
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtccg 228  Q
    ||||| |||||| ||||  |||| ||||||||||||||||| |||||||||| ||||||| |||||||||| ||||||||| |||||||||||||||    
T  18190090 tcggacacgtgttgtgtctgacatcgacacttgtaattacactgaattatgtaattttttcaaattattaggtgtgtcagtatccgtgtcgtgtccg 18190186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 132 - 230
Target Start/End: Complemental strand, 18337406 - 18337309
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtccgtg 230  Q
    ||||| |||||| |||| ||||||||||||||||||||||| |||||||||||||||||| |||||||| ||  ||||||| |||||||||| ||||||    
T  18337406 tcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattggc-atgtcagtgtccgtgtcgtatccgtg 18337309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 17778606 - 17778523
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtccgtgtccgt 235  Q
    |||||||||||||||||||||||| ||   ||||||||||||| ||||||||||||||||| || |||||||||||||||| |||||    
T  17778606 acgacaccgacacttgtaattacactg---tatgtgattttttcaaattattagctgtgtctgtctccgtgtcgtgtccgtatccgt 17778523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 149 - 211
Target Start/End: Original strand, 1486708 - 1486770
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcag 211  Q
    ||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||    
T  1486708 acgacaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtcag 1486770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 22881606 - 22881675
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||| ||||||||||||||||||||||| | |||||||||||||||| |||||||||| ||||||    
T  22881606 gtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtc 22881675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 113359 - 113299
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  113359 acgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 113299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 40258923 - 40259002
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtg 219  Q
    |||||||||  |||||||||||||||||||||| |||||||||||||||||| |||||||||  |||||| || ||||||    
T  40258923 gtgtcgtgtctgacaccgacacttgtaattacactgaattatgtgattttttcaaattattaattgtgtcggtgtccgtg 40259002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 1815326 - 1815265
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    |||||||||  |||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  1815326 gtgtcgtgtcggacaccgacacttgtaattacactgaattatgtgattttttaaaataatta 1815265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 19058850 - 19058915
Alignment:
Q  144 cgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| ||||||||||||||||||||||| |||||||||| || |||| |||||||||||||||||    
T  19058850 cgtgtccgacaccgacacttgtaattacactgaattatgttatctttttaaattattagctgtgtc 19058915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 31672889 - 31672954
Alignment:
Q  144 cgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| ||||||||| ||||||||||||| ||||||| |||||||||| |||||||||||||||||    
T  31672889 cgtgtccgacaccgagacttgtaattacactgaattaagtgattttttcaaattattagctgtgtc 31672954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 37598908 - 37598832
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| ||||||||||| |||||||||||||| |||||||| |||||| ||||||||||| |||||||||| ||||||    
T  37598908 tcggacacgtgtcgtgtccgacaccgacacttataattacactgaatt-tgtgattttttcaaattattagttgtgtc 37598832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 42359449 - 42359510
Alignment:
Q  150 cgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcag 211  Q
    ||||||||||||||||||||||| |||||| ||||||||||| |||||||||| ||||||||    
T  42359449 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagatgtgtcag 42359510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 1704991 - 1705051
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||||||||||  |||||||||||||||||| |||||||||| ||||||    
T  1704991 acgacaccgacacttgtaattaccctgaattatgtgattttttcaaattattagatgtgtc 1705051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 139 - 252
Target Start/End: Original strand, 24334694 - 24334812
Alignment:
Q  139 cgtgtcgtgtacgacaccgacacttgtaattacattgaattatg-tgattttttaaaattattagctgtgtc--agtttccgtgtc--gtgtccgtgtcc 233  Q
    |||| ||||| ||||||||||||||||||||||| |||||||||    |||||| |||| ||||||||||||   || ||||||||  ||||||||||||    
T  24334694 cgtgacgtgtccgacaccgacacttgtaattacactgaattatgcattttttttcaaatgattagctgtgtcggtgtgtccgtgtccggtgtccgtgtcc 24334793  T
Q  234 gtatctatgcttcataggt 252  Q
    ||||| |||||||||||||    
T  24334794 gtatccatgcttcataggt 24334812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 47989557 - 47989505
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  47989557 acgacaccgacacttgtaattacactgaattatgtgatttttttaaattatta 47989505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 6612170 - 6612227
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgt 206  Q
    |||||||||||||||||||||||| |||||||||| ||||||| ||||||||| ||||    
T  6612170 acgacaccgacacttgtaattacactgaattatgtaattttttcaaattattaactgt 6612227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 149 - 238
Target Start/End: Original strand, 18556455 - 18556541
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtc-gtgtccgtgtccgtatc 238  Q
    |||||||| | ||||||||||||||| ||||||||||| |||| ||||||||||||||||| |    |||||| |||||||||||||||||    
T  18556455 acgacaccaatacttgtaattacattaaattatgtgatattttcaaattattagctgtgtcgg----cgtgtcagtgtccgtgtccgtatc 18556541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 152 - 209
Target Start/End: Complemental strand, 21378635 - 21378578
Alignment:
Q  152 acaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||||||||||| |||||||||| ||||||| || ||||||||||||||    
T  21378635 acaccgacacttgtaattacactgaattatgtaattttttcaatttattagctgtgtc 21378578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 31015097 - 31015044
Alignment:
Q  155 ccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgt 208  Q
    |||||||||||||||||| |||||||||||||||| | ||||||||||||||||    
T  31015097 ccgacacttgtaattacactgaattatgtgattttctcaaattattagctgtgt 31015044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 143 - 252
Target Start/End: Original strand, 35702581 - 35702693
Alignment:
Q  143 tcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcag--tttccgtgtcgtgtcc-gtgtccgtatct 239  Q
    |||||| |||||| |||||||||||||||| | |||||| |||  |||| ||||||||||||||||| |  | || ||||||||||| |||||||||||     
T  35702581 tcgtgtccgacactgacacttgtaattacacttaattatttgaagttttcaaattattagctgtgtcggcatgtcagtgtcgtgtccggtgtccgtatcc 35702680  T
Q  240 atgcttcataggt 252  Q
     ||||||||||||    
T  35702681 gtgcttcataggt 35702693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 28273089 - 28273149
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcag 211  Q
    |||||||||||||||||||||| |||||||| ||||||||| |||| ||||| ||||||||    
T  28273089 gacaccgacacttgtaattacactgaattatatgattttttcaaatgattagttgtgtcag 28273149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 5927331 - 5927398
Alignment:
Q  141 tgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgt 208  Q
    |||| ||| |||||| |||||||||||||||||| |||||| ||||||||| ||||||||||| ||||    
T  5927331 tgtcatgtccgacactgacacttgtaattacattaaattatatgattttttcaaattattagcagtgt 5927398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 191
Target Start/End: Complemental strand, 28663669 - 28663626
Alignment:
Q  148 tacgacaccgacacttgtaattacattgaattatgtgatttttt 191  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  28663669 tacgacaccgacacttgtaattacatagaattatgtgatttttt 28663626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 32461465 - 32461520
Alignment:
Q  152 acaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtg 207  Q
    ||||| ||||||||||||||||| |||||||||||||||| |||||||||| ||||    
T  32461465 acaccaacacttgtaattacattaaattatgtgattttttcaaattattagttgtg 32461520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 153 - 226
Target Start/End: Complemental strand, 52284759 - 52284685
Alignment:
Q  153 caccgacacttgtaattacattgaattatgtgatttttta-aaattattagctgtgtcagtttccgtgtcgtgtc 226  Q
    |||||||||||||||||| | |||||||| |  ||||||  |||||||||||||||||||| |||||||||||||    
T  52284759 caccgacacttgtaattatactgaattatatttttttttttaaattattagctgtgtcagtgtccgtgtcgtgtc 52284685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 5944343 - 5944283
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgatt--ttttaaaattattagctgtg 207  Q
    ||||||||||||||| |||||||| ||||||||||||||  |||| |||||||||||||||    
T  5944343 acgacaccgacacttataattacactgaattatgtgattttttttcaaattattagctgtg 5944283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 32434718 - 32434775
Alignment:
Q  152 acaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||| |||||||||||||||| |||||||||||| ||||| |||||||||| ||||||    
T  32434718 acacagacacttgtaattacaatgaattatgtgactttttcaaattattagttgtgtc 32434775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 238
Target Start/End: Complemental strand, 34371773 - 34371685
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtccgtgtccgtatc 238  Q
    ||||||||||||| | |||||||| |||||||||||||||| |  |||||||||| |||||||| ||| ||| |||||| ||| ||||||    
T  34371773 acgacaccgacacatataattacactgaattatgtgattttct-caattattagcggtgtcagtgtccatgttgtgtccatgttcgtatc 34371685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 41877464 - 41877529
Alignment:
Q  144 cgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| ||||||||||||||||||||||| | |||||||| ||||| | ||||||||||| |||||    
T  41877464 cgtgtccgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtc 41877529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 48450592 - 48450645
Alignment:
Q  155 ccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgt 208  Q
    |||||||||||||||||| | |||||||| ||||||| ||||||||||||||||    
T  48450592 ccgacacttgtaattacactaaattatgttattttttcaaattattagctgtgt 48450645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 5376499 - 5376559
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||||| |||||||| |||||||||| ||||| | ||||||||||| |||||    
T  5376499 acgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtc 5376559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 6332730 - 6332671
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||| ||||||||||||| ||||||||||||| |||| |||||||||| ||||||    
T  6332730 acgacaccgatacttgtaattacactgaattatgtgat-ttttcaaattattagttgtgtc 6332671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 138 - 218
Target Start/End: Complemental strand, 40181942 - 40181862
Alignment:
Q  138 acgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgt 218  Q
    |||||| |||| ||||||||| || | |||||||| |||||||||||||||| | ||||||||||| ||||| || |||||    
T  40181942 acgtgttgtgtccgacaccgatacatataattacactgaattatgtgattttctcaaattattagcagtgtctgtgtccgt 40181862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 148 - 199
Target Start/End: Complemental strand, 2283727 - 2283676
Alignment:
Q  148 tacgacaccgacacttgtaattacattgaattatgtgattttttaaaattat 199  Q
    ||||||||| |||||| |||||||||||||| |||||||||||| |||||||    
T  2283727 tacgacaccaacacttataattacattgaatcatgtgattttttcaaattat 2283676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 5898254 - 5898325
Alignment:
Q  138 acgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||  ||||||||| | | |||||||| |||||||||||||||||| | ||||||||| |||||    
T  5898254 acgtgtcgtgtctgacaccgacgcatataattacactgaattatgtgattttttcagattattagcggtgtc 5898325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 6427410 - 6427351
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgt 208  Q
    |||||||| |||| | ||||||||||||||||||||||||| | ||||||||||| ||||    
T  6427410 acgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgt 6427351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 14359529 - 14359625
Alignment:
Q  157 gacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc--agtttccgtgtc-gtgtccgtgtccgtatctatgcttcataggt 252  Q
    |||||||||||||||| | |||||||||| ||||| |||||||||||||||||   || |||||||| |||| ||||||||||||  ||||||||||||    
T  14359529 gacacttgtaattacactaaattatgtga-tttttcaaattattagctgtgtcggcgtgtccgtgtctgtgt-cgtgtccgtatccgtgcttcataggt 14359625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 29163369 - 29163420
Alignment:
Q  138 acgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgatttt 189  Q
    ||||||||||| |||||||||||| | |||||| ||||||||||||||||||    
T  29163369 acgtgtcgtgtccgacaccgacacatataattaaattgaattatgtgatttt 29163420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 252
Target Start/End: Original strand, 30173761 - 30173867
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgatttttt--aaaattattagctgtgtcagtttccgtgtcgtgtcc-gtgtccgtatctatgctt 245  Q
    |||||||||||||||||||||||| ||| |||||| |||||||  |||||||||| | |||||  | |||||||| | ||| ||||| |||||  |||||    
T  30173761 acgacaccgacacttgtaattacactgagttatgtaatttttttcaaaattattaacagtgtcgatgtccgtgtcatttccagtgtctgtatccgtgctt 30173860  T
Q  246 cataggt 252  Q
    |||||||    
T  30173861 cataggt 30173867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 31694709 - 31694771
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtga--ttttttaaaattattagctgtgtc 209  Q
    |||||||||||||||||||||| | ||||||||||||  |||||| |||||||||||| ||||    
T  31694709 acgacaccgacacttgtaattatactgaattatgtgattttttttcaaattattagctatgtc 31694771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 151 - 250
Target Start/End: Complemental strand, 36878519 - 36878417
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc--agtttccgtgtc-gtgtccgtgtccgtatctatgcttca 247  Q
    ||||||||||| | |||||||| |||||||||||||||| | ||||||||||| |||||   || || |||||  ||||||||||||||||  |||||||    
T  36878519 gacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtctatgtccgtgtccgtatccgtgcttca 36878420  T
Q  248 tag 250  Q
    |||    
T  36878419 tag 36878417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 191
Target Start/End: Complemental strand, 6427524 - 6427482
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgatttttt 191  Q
    ||||||| |||||||||| ||||||||||||||||||||||||    
T  6427524 acgacactgacacttgtagttacattgaattatgtgatttttt 6427482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 209
Target Start/End: Complemental strand, 18471355 - 18471298
Alignment:
Q  154 accgacacttgtaattacattgaattatgtgatt--ttttaaaattattagctgtgtc 209  Q
    ||||||||||||||||| | ||||||||||||||  |||| |||||||||||||||||    
T  18471355 accgacacttgtaattatactgaattatgtgattttttttcaaattattagctgtgtc 18471298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 1864882 - 1864939
Alignment:
Q  152 acaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||| | |||||||| |||||||||||||||| | ||||||||| |||||||    
T  1864882 acaccgacacatataattacactgaattatgtgattttctcaaattattaactgtgtc 1864939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 209
Target Start/End: Complemental strand, 23738735 - 23738678
Alignment:
Q  152 acaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| |||| | ||||| || |||||||||||||||||| |||||||||||||||||    
T  23738735 acaccaacacatttaattgcactgaattatgtgattttttcaaattattagctgtgtc 23738678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 25272542 - 25272481
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtca 210  Q
    ||||||||||||||| |||||||| | |||||||||||||| | ||||| ||| ||||||||    
T  25272542 acgacaccgacacttataattacactaaattatgtgattttctcaaattgttaactgtgtca 25272481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 26830641 - 26830568
Alignment:
Q  156 cgacacttgtaattacattgaattatgtgatt-ttttaaaattattagctgtgtcagtttccgtgtcgtgtccg 228  Q
    |||||||| |||||||||| |||||||||||| |||| |||||||||  |||||  || |||||||||||||||    
T  26830641 cgacacttataattacatttaattatgtgattttttttaaattattatttgtgttggtatccgtgtcgtgtccg 26830568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 40917809 - 40917751
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||| ||||||||||||| | ||||  |||||||||| |||||||||||||||||    
T  40917809 acgacaccgagacttgtaattacacttaatt--gtgattttttcaaattattagctgtgtc 40917751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 398780 - 398824
Alignment:
Q  165 taattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||| |||||||||||||||||| ||||||||||| |||||    
T  398780 taattacactgaattatgtgattttttcaaattattagcggtgtc 398824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 1262928 - 1262884
Alignment:
Q  165 taattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||| |||||||||||||||||| | |||||||||||||||||    
T  1262928 taattatattgaattatgtgattttctcaaattattagctgtgtc 1262884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 9103703 - 9103640
Alignment:
Q  145 gtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||| ||||||||||||||||| ||| | | |||||||||||||||| ||||||||| |||||||    
T  9103703 gtgtccgacaccgacacttgta-ttaaactaaattatgtgattttttcaaattattaactgtgtc 9103640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 9629899 - 9629959
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||||| |||| ||| |||||||| ||||||| | ||||||||||| |||||    
T  9629899 acgacaccgacacttataatcacactgaattatatgattttatcaaattattagcggtgtc 9629959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 9709885 - 9709821
Alignment:
Q  144 cgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgt 208  Q
    ||||| |||||||||||| | ||||||||  ||||||||||||||| | ||||||||||| ||||    
T  9709885 cgtgtccgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgt 9709821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 13011223 - 13011275
Alignment:
Q  158 acacttgtaattacattgaattatgtga-ttttttaaaattattagctgtgtc 209  Q
    ||||||||||||||| | |||||||||| |||||| |||||||||||||||||    
T  13011223 acacttgtaattacacttaattatgtgatttttttcaaattattagctgtgtc 13011275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 30847737 - 30847781
Alignment:
Q  167 attacattgaattatgtgattttttaaaattattagctgtgtcag 211  Q
    ||||||||||||||||| ||||||| ||||||||||| |||||||    
T  30847737 attacattgaattatgtcattttttcaaattattagcagtgtcag 30847781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 39953141 - 39953205
Alignment:
Q  145 gtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||| |||||||||||| |  ||||||| | |||||||||||||| ||||||||||||| |||||    
T  39953141 gtgtccgacaccgacacatacaattacactaaattatgtgattttctaaaattattagcggtgtc 39953205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 12443476 - 12443519
Alignment:
Q  166 aattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||| |||||||||||||||| | |||||||||||||||||    
T  12443476 aattacactgaattatgtgattttctcaaattattagctgtgtc 12443519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 144 - 191
Target Start/End: Complemental strand, 21621020 - 21620973
Alignment:
Q  144 cgtgtacgacaccgacacttgtaattacattgaattatgtgatttttt 191  Q
    ||||| |||||||||| ||||||| |||| ||||||||||||||||||    
T  21621020 cgtgtccgacaccgacgcttgtaaatacactgaattatgtgatttttt 21620973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 22781519 - 22781440
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcag 211  Q
    ||||||||||||||| | ||||||| |  | | |||||| ||| |||||| ||||||| ||||||||||||| |||||||    
T  22781519 tcggatacgtgtcgtatccgacaccaatgcatataattatatttaattatatgattttataaaattattagcggtgtcag 22781440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 149 - 228
Target Start/End: Complemental strand, 25361946 - 25361867
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtccg 228  Q
    ||||||| ||||| | |||||||| |||||||||||||||| | ||||||| ||  ||||| |  |||||||||||||||    
T  25361946 acgacactgacacatataattacactgaattatgtgattttctcaaattatcagtggtgtcggcgtccgtgtcgtgtccg 25361867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 31667484 - 31667433
Alignment:
Q  150 cgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    |||||||||||| ||| |||||||| |||||||| ||||| |||||||||||    
T  31667484 cgacaccgacacatgtgattacatttaattatgtcattttctaaaattatta 31667433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 149 - 255
Target Start/End: Original strand, 35919275 - 35919391
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgatttt-----ttaaaattattagctgtgtc--agtttccgtgtc---gtgtccgtgtccgtatc 238  Q
    ||||||| ||||||| |||||||| ||||||||||||||||     || |||||||||| ||||||  ||| |  |||||   ||||| |||||||||||    
T  35919275 acgacacggacacttataattacactgaattatgtgattttttttcttcaaattattagatgtgtcggagtgttggtgtccgtgtgtcagtgtccgtatc 35919374  T
Q  239 tatgcttcataggtagt 255  Q
    | |||||||||||||||    
T  35919375 tgtgcttcataggtagt 35919391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 190
Target Start/End: Original strand, 15449230 - 15449272
Alignment:
Q  148 tacgacaccgacacttgtaattacattgaattatgtgattttt 190  Q
    |||||||| |||||||||||||||| | |||||||||||||||    
T  15449230 tacgacacagacacttgtaattacactaaattatgtgattttt 15449272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 21366039 - 21366077
Alignment:
Q  169 tacattgaattatgtgattttttaaaattattagctgtg 207  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  21366039 tacactgaattatgttattttttaaaattattagctgtg 21366077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 203
Target Start/End: Original strand, 23531793 - 23531831
Alignment:
Q  165 taattacattgaattatgtgattttttaaaattattagc 203  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  23531793 taattacattgaattatgtgatattttcaaattattagc 23531831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 197
Target Start/End: Complemental strand, 28170439 - 28170393
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaatt 197  Q
    ||||| ||||||||| ||||||||||||||||| |||||| ||||||    
T  28170439 gacactgacacttgttattacattgaattatgtcatttttcaaaatt 28170393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 30749904 - 30749854
Alignment:
Q  145 gtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaa 195  Q
    |||| |||||||||||| | |||||||| |||||||||||||||| |||||    
T  30749904 gtgtccgacaccgacacatataattacactgaattatgtgattttctaaaa 30749854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 30771355 - 30771305
Alignment:
Q  145 gtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaa 195  Q
    |||| |||||||||||| | |||||||| |||||||||||||||| |||||    
T  30771355 gtgtccgacaccgacacatataattacactgaattatgtgattttctaaaa 30771305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 199
Target Start/End: Complemental strand, 44482290 - 44482240
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattat 199  Q
    ||||||||||||| | |||||||| |||||||||||||||| | |||||||    
T  44482290 acgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 48148036 - 48148098
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtga-ttttttaaaattattagctgtgtca 210  Q
    ||||||||||||  | |||||||| |||||||| ||| |||||||||||||||||| ||||||    
T  48148036 acgacaccgacatatataattacactgaattatatgatttttttaaaattattagcggtgtca 48148098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 201
Target Start/End: Original strand, 2288164 - 2288218
Alignment:
Q  145 gtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    |||| |||||||||||| |  |||||||||||||||||||||||| | |||||||||    
T  2288164 gtgtccgacaccgacacat--aattacattgaattatgtgattttcttaaattatta 2288218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 7918210 - 7918263
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattag 202  Q
    ||||||| ||||| | |||||||| |||||||||||||||| | ||||||||||    
T  7918210 acgacactgacacatataattacactgaattatgtgattttctcaaattattag 7918263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 9828104 - 9828051
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattag 202  Q
    ||||||||||||| |  ||||||| |||||||||||||||| | ||||||||||    
T  9828104 acgacaccgacacataaaattacactgaattatgtgattttatcaaattattag 9828051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 13436523 - 13436458
Alignment:
Q  144 cgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| ||||||| |||| | |||||||| |||||||||||||||  | ||||||||||| |||||    
T  13436523 cgtgtccgacaccaacacatataattacactgaattatgtgatttccttaaattattagcagtgtc 13436458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 13997940 - 13997891
Alignment:
Q  152 acaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    |||||||||| | |||||||| |||||||||||||||||| |||| ||||    
T  13997940 acaccgacacatataattacactgaattatgtgatttttttaaataatta 13997891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 201
Target Start/End: Complemental strand, 19637845 - 19637776
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    ||||||| || |||||| |||||||||||| | | |||||||||||| |||| ||||| | |||||||||    
T  19637845 tcggatatgtatcgtgtccgacaccgacacatatgattacattgaataatgtcattttcttaaattatta 19637776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 29144427 - 29144472
Alignment:
Q  205 gtgtcagtttccgtgtcgtgtccgtgtccgtatctatgcttcatag 250  Q
    |||||||| |||||||||| || ||||||||||| |||||||||||    
T  29144427 gtgtcagtgtccgtgtcgtatctgtgtccgtatccatgcttcatag 29144472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 52903314 - 52903257
Alignment:
Q  144 cgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    ||||| |||||||||||| | |||||||| |||||||| ||||||| | |||||||||    
T  52903314 cgtgtccgacaccgacacatataattacactgaattatatgattttattaaattatta 52903257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 14332634 - 14332694
Alignment:
Q  142 gtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattag 202  Q
    ||||||| ||||||||| || | |||||||| | |||||||||||||| | ||||||||||    
T  14332634 gtcgtgtccgacaccgagacatataattacactaaattatgtgattttctcaaattattag 14332694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 201
Target Start/End: Original strand, 16164330 - 16164366
Alignment:
Q  165 taattacattgaattatgtgattttttaaaattatta 201  Q
    |||||||||| |||||||||||||||| |||||||||    
T  16164330 taattacattaaattatgtgattttttcaaattatta 16164366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 17007953 - 17008001
Alignment:
Q  142 gtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttt 190  Q
    ||||||| |||||| ||||||||| |||| |||||||||||| ||||||    
T  17007953 gtcgtgtccgacactgacacttgtgattatattgaattatgtaattttt 17008001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 201
Target Start/End: Original strand, 17425108 - 17425144
Alignment:
Q  165 taattacattgaattatgtgattttttaaaattatta 201  Q
    ||||||||||||||||||||||||| | |||||||||    
T  17425108 taattacattgaattatgtgattttatcaaattatta 17425144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 20157349 - 20157409
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||| | | |||||| |||||||||||||||| | | ||||||||| |||||    
T  20157349 acgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtc 20157409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 26526758 - 26526813
Alignment:
Q  152 acaccgacacttgtaattacattgaattatgtg--attttttaaaattattagctg 205  Q
    ||||||||||||||||||| ||| |||||||||   |||||| |||||||||||||    
T  26526758 acaccgacacttgtaattatattaaattatgtgttttttttttaaattattagctg 26526813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 27471567 - 27471619
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaattattagc 203  Q
    |||||| |||| |||||||||| ||||||||||| |||| | |||||||||||    
T  27471567 gacaccaacacatgtaattacactgaattatgtgcttttctcaaattattagc 27471619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 209
Target Start/End: Original strand, 29144365 - 29144417
Alignment:
Q  157 gacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||| || ||||| |  |||||| |||||||||||||||||    
T  29144365 gacacttgtaattacactgcattatctatttttttcaaattattagctgtgtc 29144417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 149 - 228
Target Start/End: Complemental strand, 25566901 - 25566822
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtccg 228  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| || ||||| ||||||    
T  25566901 acgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagtgtctgtgtcatgtccg 25566822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 146 - 250
Target Start/End: Complemental strand, 8343035 - 8342930
Alignment:
Q  146 tgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtccg-tgtccgtatctatgct 244  Q
    ||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||| |||| || || |||||||||||| ||||||| ||  ||||    
T  8343035 tgtacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcggtgtcagtgtcgtgtccgatgtccgtgtccgtgct 8342936  T
Q  245 tcatag 250  Q
    ||||||    
T  8342935 tcatag 8342930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 22652036 - 22651976
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  22652036 acgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtc 22651976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 251
Target Start/End: Original strand, 36450736 - 36450852
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtc-gtgtccgtg 230  Q
    ||||| ||| ||||||| ||||||| ||||||||||||||| |||||| ||||||||||| |||||||||| |||||| |    |||||| |||||||||    
T  36450736 tcggacacgcgtcgtgtccgacacctacacttgtaattacactgaattctgtgattttttcaaattattagttgtgtcgg----cgtgtcagtgtccgtg 36450831  T
Q  231 tccgtatctatgcttcatagg 251  Q
    ||||||||  |||||||||||    
T  36450832 tccgtatccgtgcttcatagg 36450852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 250
Target Start/End: Complemental strand, 22596070 - 22595950
Alignment:
Q  133 cggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc--agtttccgtgtcgtgtcc-gt 229  Q
    |||| |||||||| || ||||||| ||||||||||||||| |||||||||| ||||||| |||||||||||||||||   || || |||| |||||| ||    
T  22596070 cggacacgtgtcgcgtccgacaccaacacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagtgttgtgtccggt 22595971  T
Q  230 gtccgtatctatgcttcatag 250  Q
    |||||||||  ||||||||||    
T  22595970 gtccgtatccgtgcttcatag 22595950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 151 - 252
Target Start/End: Original strand, 4298887 - 4298996
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc--------agtttccgtgtcgtgtccgtgtccgtatctatg 242  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||        ||| || ||||||||||||||||| ||||  ||    
T  4298887 gacaccgacacttgtaattacattaaattatgtgattttttcaaattattaactgtgtcggcgtgttagtatctgtgtcgtgtccgtgtccatatccgtg 4298986  T
Q  243 cttcataggt 252  Q
    ||||||||||    
T  4298987 cttcataggt 4298996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 4948718 - 4948659
Alignment:
Q  143 tcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattag 202  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  4948718 tcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 4948659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 131 - 201
Target Start/End: Complemental strand, 20873147 - 20873077
Alignment:
Q  131 atcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    |||||| |||| |||||| ||||||||||||||||||||||| | |||||||||||||||| |||||||||    
T  20873147 atcggacacgtatcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 20873077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 138 - 250
Target Start/End: Complemental strand, 40332262 - 40332155
Alignment:
Q  138 acgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtcc-gtgtccgta 236  Q
    ||||||||||| | ||||||||||||||||||||| |||||||||||||||| | |||||||| |      |||| |||||||||||||| |||||||||    
T  40332262 acgtgtcgtgtcccacaccgacacttgtaattacactgaattatgtgattttctcaaattatttg------cagtgtccgtgtcgtgtccggtgtccgta 40332169  T
Q  237 tctatgcttcatag 250  Q
    ||  ||||||||||    
T  40332168 tccgtgcttcatag 40332155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 5813669 - 5813592
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| ||||||||||| ||||||||||||||||| ||||| | || ||||||| ||||| |||||||||||||||||    
T  5813669 tcggacacgtgtcgtgtccgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagctgtgtc 5813592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 8343381 - 8343316
Alignment:
Q  144 cgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||| |||||||||||||||| | |||||||||||||||| |||||||||||| ||||    
T  8343381 cgtgtacgacactgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtc 8343316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 18407788 - 18407719
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||| || || ||||||||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  18407788 gtgtcgtgtccggcagcgacacttgtaattacactgaattatgtgatttttttgaattattagctgtgtc 18407719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 2572055 - 2572115
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||||||||||| | |||||||||||||||| |||||||||| ||||||    
T  2572055 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtc 2572115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 13436963 - 13437023
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||||||| |||||  |||||||||||||||||| |||||||||||||||||    
T  13436963 acgacaccgacacttgttattaccatgaattatgtgattttttcaaattattagctgtgtc 13437023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 21465472 - 21465412
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||| |||||||||||||||| ||||||| ||||||||| |||||||||||||||||    
T  21465472 acgacaccaacacttgtaattacatcgaattatatgattttttcaaattattagctgtgtc 21465412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 29447111 - 29447169
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||| |||||||||||||||||||||| | |||||||||| ||||||    
T  29447111 gacaccgacacttgtagttacattgaattatgtgattttctcaaattattagttgtgtc 29447169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 24613585 - 24613521
Alignment:
Q  144 cgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| ||||||||||||||||||||||| | ||||||||||| |||| |||||||||||||||||    
T  24613585 cgtgtccgacaccgacacttgtaattacacttaattatgtgat-ttttcaaattattagctgtgtc 24613521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 29510306 - 29510363
Alignment:
Q  152 acaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||||||||| | |||||| ||||||||||| |||||||||||||||||    
T  29510306 acaccgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtc 29510363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 139 - 223
Target Start/End: Complemental strand, 31514943 - 31514858
Alignment:
Q  139 cgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgatt-ttttaaaattattagctgtgtcagtttccgtgtcgt 223  Q
    |||||||||| | ||||| ||||||||| ||||  |||||||||||||| |||| |||||||||| ||||||||| ||||||||||    
T  31514943 cgtgtcgtgtccaacaccaacacttgtagttacgctgaattatgtgatttttttcaaattattagttgtgtcagtgtccgtgtcgt 31514858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 15816128 - 15816188
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||||| |||||||| | |||||||||||||||| |||||||||| ||||||    
T  15816128 acgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtc 15816188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 30077387 - 30077442
Alignment:
Q  150 cgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctg 205  Q
    |||||| |||||||||||||||| ||||||||||||| |||| |||||||||||||    
T  30077387 cgacacggacacttgtaattacactgaattatgtgatgttttcaaattattagctg 30077442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 31236570 - 31236636
Alignment:
Q  143 tcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||| || ||||||||| | ||||||||||||||||||||||||| | ||||||||||| |||||    
T  31236570 tcgtgtccgtcaccgacacatataattacattgaattatgtgattttctcaaattattagcagtgtc 31236636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 41831917 - 41831999
Alignment:
Q  132 tcggatacgtgtcgtgtacgacacc-----gacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||| |||||| |||||||     |||||||||| ||||| |||||||||||||||||| ||||||||| |||||||    
T  41831917 tcggatacgtatcgtgtccgacaccaacacgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtc 41831999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 3025622 - 3025557
Alignment:
Q  138 acgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagc 203  Q
    ||||||||||| |||||| ||||| | |||||||| |||||||||||||||| | |||||||||||    
T  3025622 acgtgtcgtgtccgacactgacacctataattacactgaattatgtgattttctcaaattattagc 3025557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 208
Target Start/End: Original strand, 22197743 - 22197800
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgt 208  Q
    ||||| |||||||||||||||| | |||||||||| ||||| ||||||||||||||||    
T  22197743 gacactgacacttgtaattacactaaattatgtgaatttttcaaattattagctgtgt 22197800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 31557065 - 31556997
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||  |||||||| ||||||||||||| ||||||||||||| |||| ||||||||| |||||||    
T  31557065 gtgtcgtgtctgacaccgaaacttgtaattacactgaattatgtgat-ttttcaaattattaactgtgtc 31556997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 28745558 - 28745498
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||| ||||| ||||| |||||||||||||||||| ||||| ||||||||||| |||||    
T  28745558 acgacatcgacatttgtagttacattgaattatgtgaatttttcaaattattagcagtgtc 28745498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 30271290 - 30271350
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||| | |||||||||||||| || ||||||||||||||| |||| ||||||||||||    
T  30271290 acgacactggcacttgtaattacactgcattatgtgattttttcaaatgattagctgtgtc 30271350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 44694842 - 44694790
Alignment:
Q  158 acacttgtaattacattgaattatgtgattttttaaaattattagctgtgtca 210  Q
    ||||||||||||||  | ||||||||||||||||||||||||| |||||||||    
T  44694842 acacttgtaattacgcttaattatgtgattttttaaaattatttgctgtgtca 44694790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 197
Target Start/End: Original strand, 18170482 - 18170529
Alignment:
Q  150 cgacaccgacacttgtaattacattgaattatgtgattttttaaaatt 197  Q
    ||||||||||| |||||||||||||||||||||| ||||||| |||||    
T  18170482 cgacaccgacatttgtaattacattgaattatgtaattttttcaaatt 18170529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 197
Target Start/End: Original strand, 18634050 - 18634097
Alignment:
Q  150 cgacaccgacacttgtaattacattgaattatgtgattttttaaaatt 197  Q
    ||||||||||| |||||||||||||||||||||| ||||||| |||||    
T  18634050 cgacaccgacatttgtaattacattgaattatgtaattttttcaaatt 18634097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 250
Target Start/End: Complemental strand, 24669492 - 24669384
Alignment:
Q  150 cgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagc--------tgtgtcagtttccgtgtcgtgtccgtgtccgtatctat 241  Q
    ||||||||||||||||||||||| |||||||||| ||||  | ||||||||| |         |||||||| || |||||||||||||||||||||| ||    
T  24669492 cgacaccgacacttgtaattacactgaattatgtaatttcctcaaattattaacggtgtcagcgtgtcagtgtctgtgtcgtgtccgtgtccgtatccat 24669393  T
Q  242 gcttcatag 250  Q
    |||| ||||    
T  24669392 gctttatag 24669384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 41838131 - 41838182
Alignment:
Q  158 acacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||| || || |||||||||||||||||| |||||||||||||||||    
T  41838131 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtc 41838182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 201
Target Start/End: Complemental strand, 3677856 - 3677794
Alignment:
Q  139 cgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    ||||| |||| | ||||||| || | ||||||||| |||||||||||||||||||||||||||    
T  3677856 cgtgttgtgtccaacaccgatacatataattacatagaattatgtgattttttaaaattatta 3677794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 12606830 - 12606888
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||| | ||||||||||||||||| ||||||| | ||||||||||| |||||    
T  12606830 gacaccgacacatataattacattgaattatatgattttctcaaattattagcagtgtc 12606888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 14134775 - 14134706
Alignment:
Q  133 cggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattag 202  Q
    |||| |||||||||||  ||||||||||  | |||||||| |||||||||||||||| | ||||||||||    
T  14134775 cggacacgtgtcgtgtttgacaccgacatatataattacactgaattatgtgattttctcaaattattag 14134706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 4786329 - 4786389
Alignment:
Q  141 tgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    |||||| | |||||||||||| | |||||||| |||||||||||||||| | |||||||||    
T  4786329 tgtcgtatccgacaccgacacatataattacactgaattatgtgattttcttaaattatta 4786389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 7442902 - 7442846
Alignment:
Q  152 acaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgt 208  Q
    ||||| ||||||||||||||| |||||||||| ||||| | ||||||||||| ||||    
T  7442902 acaccaacacttgtaattacactgaattatgtaattttatgaaattattagcggtgt 7442846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 11927085 - 11927137
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    ||||||||||||| | |||||||| |||||||||||||||| | |||||||||    
T  11927085 acgacaccgacacatataattacactgaattatgtgattttatcaaattatta 11927137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 13844591 - 13844655
Alignment:
Q  145 gtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||| |||||||||||| | |||||||| | |||||||||||||| | ||||||||||| |||||    
T  13844591 gtgtccgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtc 13844655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 25192350 - 25192406
Alignment:
Q  153 caccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||| |||||| | |||||||||| | ||||| |||||||||||||||||    
T  25192350 caccgacacttataattatactgaattatgtcactttttcaaattattagctgtgtc 25192406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 34897149 - 34897085
Alignment:
Q  145 gtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||| ||||| |||||| | |||||||| |||||||||||||||| | ||||||||||| |||||    
T  34897149 gtgtccgacatcgacacatataattacactgaattatgtgattttctcaaattattagcggtgtc 34897085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 195
Target Start/End: Complemental strand, 18964234 - 18964191
Alignment:
Q  152 acaccgacacttgtaattacattgaattatgtgattttttaaaa 195  Q
    |||||||||| | ||||||||||||||||||||||||| |||||    
T  18964234 acaccgacacatataattacattgaattatgtgattttctaaaa 18964191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 151 - 202
Target Start/End: Original strand, 20679396 - 20679447
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaattattag 202  Q
    ||||||||||||| |||||||| |||| ||||||||||| | ||||||||||    
T  20679396 gacaccgacacttataattacactgaactatgtgattttctcaaattattag 20679447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 926770 - 926840
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattag 202  Q
    ||||| |||||||| || |||||||||||||| |||||||| ||||  ||| |||||| | ||||||||||    
T  926770 tcggacacgtgtcgcgtccgacaccgacacttataattacactgaacaatgagattttctcaaattattag 926840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 4673426 - 4673484
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| || ||||||||||||| |||||| | ||||||||| ||||||||| |||||||    
T  4673426 gacactgatacttgtaattacactgaattttatgattttttcaaattattatctgtgtc 4673484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 15023238 - 15023288
Alignment:
Q  131 atcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattat 181  Q
    |||||| ||||||||| | ||||| ||||||||||||||||| ||||||||    
T  15023238 atcggacacgtgtcgtatccgacatcgacacttgtaattacactgaattat 15023288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 211
Target Start/End: Original strand, 25172697 - 25172759
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcag 211  Q
    ||||||||||||| | |||||||||| || ||||| ||||| | ||||||||||| |||||||    
T  25172697 acgacaccgacacatataattacattaaaatatgtaattttatcaaattattagcagtgtcag 25172759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 26434237 - 26434187
Alignment:
Q  152 acaccgacacttgtaattacattgaattatgtgattttttaaaattattag 202  Q
    |||||||||||| |||||| |||||||||||||||||| | ||| ||||||    
T  26434237 acaccgacacttttaattatattgaattatgtgattttctcaaactattag 26434187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 27213601 - 27213547
Alignment:
Q  155 ccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||| | |||||||| |||||||||||||||| | ||||||||||| |||||    
T  27213601 ccgacacatataattacagtgaattatgtgattttctgaaattattagcagtgtc 27213547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 201
Target Start/End: Complemental strand, 29519237 - 29519203
Alignment:
Q  167 attacattgaattatgtgattttttaaaattatta 201  Q
    ||||||||||||||| |||||||||||||||||||    
T  29519237 attacattgaattatatgattttttaaaattatta 29519203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 201
Target Start/End: Original strand, 9414857 - 9414926
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    ||||| |||||||||||  |||||| |||||| ||||| || |||||||||||||| |||  ||||||||    
T  9414857 tcggacacgtgtcgtgtctgacaccaacacttataattgcactgaattatgtgattatttttaattatta 9414926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 189
Target Start/End: Original strand, 26902173 - 26902214
Alignment:
Q  148 tacgacaccgacacttgtaattacattgaattatgtgatttt 189  Q
    |||||||||||||| | |||||||| ||||||||||||||||    
T  26902173 tacgacaccgacacatataattacactgaattatgtgatttt 26902214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 33405374 - 33405435
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    ||||||||| |||||||||||| | |||||||| | ||||||||| |||| | |||||||||    
T  33405374 gtgtcgtgtccgacaccgacacatataattacactaaattatgtgtttttctcaaattatta 33405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 44505135 - 44505184
Alignment:
Q  152 acaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    |||||||||||| |||||||||| |||||| | ||||| |||||||||||    
T  44505135 acaccgacacttataattacattaaattatattattttgtaaaattatta 44505184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 11803316 - 11803256
Alignment:
Q  152 acaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagt 212  Q
    ||||| |||| | |||||||| |||||||||||||||| | ||||||||| | ||||||||    
T  11803316 acaccaacacatataattacactgaattatgtgattttcttaaattattaacagtgtcagt 11803256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 11944725 - 11944673
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    ||||||||||||| | |||||||| ||| |||||||||||| | |||||||||    
T  11944725 acgacaccgacacatataattacactgagttatgtgattttatcaaattatta 11944673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 250
Target Start/End: Original strand, 12882332 - 12882428
Alignment:
Q  154 accgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtccgtgtccgtatctatgcttcatag 250  Q
    |||||||||| |||||||| |||||||| | |||||||  |  | |||||||||||  | ||||||||||||| |||| |||||   ||||||||||    
T  12882332 accgacacttataattacactgaattatttaattttttttatattttagctgtgtcgatatccgtgtcgtgtctgtgttcgtattcgtgcttcatag 12882428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 12985456 - 12985400
Alignment:
Q  145 gtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    |||| |||||||||||  | | ||||||||||||||||||||||| | |||||||||    
T  12985456 gtgtccgacaccgacatatatgattacattgaattatgtgattttctcaaattatta 12985400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 17468507 - 17468567
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||| |||||||||||||||  | ||||||||||||||  |||||||| | ||||||    
T  17468507 acgacaccaacacttgtaattacaccgcattatgtgatttttacaaattatttgttgtgtc 17468567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 199
Target Start/End: Complemental strand, 22493536 - 22493504
Alignment:
Q  167 attacattgaattatgtgattttttaaaattat 199  Q
    |||||| ||||||||||||||||||||||||||    
T  22493536 attacactgaattatgtgattttttaaaattat 22493504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 35519833 - 35519865
Alignment:
Q  176 aattatgtgattttttaaaattattagctgtgt 208  Q
    |||||||||||||||| ||||||||||||||||    
T  35519833 aattatgtgattttttcaaattattagctgtgt 35519865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 36934714 - 36934670
Alignment:
Q  165 taattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||| ||||||||||||||||||  |||||||||| |||||    
T  36934714 taattacaatgaattatgtgattttttcgaattattagcggtgtc 36934670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 149 - 228
Target Start/End: Complemental strand, 9778560 - 9778481
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtccg 228  Q
    |||||||||||||||||||||| | |||||||||||||||||| ||||||| |||||||||||| |||||||||||||||    
T  9778560 acgacaccgacacttgtaattatactgaattatgtgattttttcaaattatcagctgtgtcagtgtccgtgtcgtgtccg 9778481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 19213870 - 19213791
Alignment:
Q  142 gtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtc 221  Q
    ||||||| ||||||||||||||||| ||||| || ||||||||||||||||||||||||||| |||||||| ||||||||    
T  19213870 gtcgtgtccgacaccgacacttgtatttacactgcattatgtgattttttaaaattattagcagtgtcagtgtccgtgtc 19213791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 24339702 - 24339642
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  24339702 acgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 24339642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 26033460 - 26033532
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtc 221  Q
    |||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| ||||||||    
T  26033460 acgagaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgcgtcagtgtccgtgtc 26033532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 151 - 209
Target Start/End: Complemental strand, 7438764 - 7438706
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  7438764 gacaccgacacttgtaattacattgaattatgtgattttttcaaattattaactgtgtc 7438706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 25481968 - 25481902
Alignment:
Q  143 tcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||| ||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  25481968 tcgtgtccgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 25481902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 7197287 - 7197356
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||| |||| |||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  7197287 gtgttgtgtccgacaccgacacttgtaattacattgaattaaatgatttttttaaattattagctgtgtc 7197356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 132 - 252
Target Start/End: Complemental strand, 15680886 - 15680769
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtc-gtgtccgtg 230  Q
    ||||| ||||||||||| |||||||||||||| |||||||| | ||||||||||||||||  ||||||||||| |||| |    |||||| |||||| ||    
T  15680886 tcggacacgtgtcgtgtccgacaccgacacttataattacactaaattatgtgattttttttaattattagctatgtcgg----cgtgtcagtgtccatg 15680791  T
Q  231 tccgtatctatgcttcataggt 252  Q
    ||||||||  ||||||||||||    
T  15680790 tccgtatccgtgcttcataggt 15680769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 211
Target Start/End: Original strand, 5409835 - 5409897
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcag 211  Q
    ||||||||||||||||||||| || |||||||||||||||||| |||||||||||||| ||||    
T  5409835 acgacaccgacacttgtaattgcactgaattatgtgattttttcaaattattagctgtatcag 5409897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 3991384 - 3991324
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||||||||| | |||||||||||||||||| |||||||||| ||||||    
T  3991384 acgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagttgtgtc 3991324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 13770751 - 13770691
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||| ||||||||||||||||| |||||||||| ||||||| |||||||||||||||||    
T  13770751 acgacaacgacacttgtaattacactgaattatgtaatttttttaaattattagctgtgtc 13770691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 21880221 - 21880158
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagc 203  Q
    ||||||||| ||||||||||||||||||||||| |||||||||| ||||| | |||||||||||    
T  21880221 gtgtcgtgtccgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagc 21880158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 11061077 - 11061135
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||||||| | | |||||||||||||||| |||||||||||||||||    
T  11061077 gacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtc 11061135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 11700847 - 11700777
Alignment:
Q  165 taattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtccgtgtccgt 235  Q
    ||||||||||||||||||||||||| | ||||||||| | |||||||  |||||||||||||||| |||||    
T  11700847 taattacattgaattatgtgattttgtcaaattattaacggtgtcagcgtccgtgtcgtgtccgtatccgt 11700777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 13300468 - 13300394
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgt 225  Q
    |||||||| ||| ||||||||| |||||||| ||||||||| |||||||||| | ||||||| ||||||||||||    
T  13300468 gacaccgagactggtaattacactgaattatatgattttttcaaattattagttatgtcagtatccgtgtcgtgt 13300394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 251
Target Start/End: Original strand, 43027468 - 43027579
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagct--------gtgtcagtttccgtgtcgtgtcc-gtgtccgtatct 239  Q
    |||||||||||||||||| ||||| || ||||||||||||||| ||||||||||||        |||||||| |||||||||||||| ||||||| |||     
T  43027468 acgacaccgacacttgtatttacactgcattatgtgattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtccagtgtccgcatcc 43027567  T
Q  240 atgcttcatagg 251  Q
     |||||||||||    
T  43027568 gtgcttcatagg 43027579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 9408332 - 9408385
Alignment:
Q  148 tacgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    ||||||||||||||||||||||||| | |||||||||||||||| |||||||||    
T  9408332 tacgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 9408385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 148 - 209
Target Start/End: Complemental strand, 19992062 - 19992001
Alignment:
Q  148 tacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||| |||||||| |||| ||||||||||| | |||||||||||||||||    
T  19992062 tacgacaccgacacttataattacactgaaatatgtgattttctcaaattattagctgtgtc 19992001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 18215185 - 18215241
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctg 205  Q
    ||||||||||||||||||| |||| || ||||||||||||||| |||||||||||||    
T  18215185 acgacaccgacacttgtaactacactgcattatgtgattttttcaaattattagctg 18215241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 21864885 - 21864806
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtga--ttttttaaaattattagctgtgtc 209  Q
    ||||| ||||||||||| ||||| ||||||||||||||||| | |||||| |||  |||||| |||||||||||||||||    
T  21864885 tcggacacgtgtcgtgtccgacagcgacacttgtaattacactaaattatatgattttttttcaaattattagctgtgtc 21864806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 35862024 - 35861964
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||| |||||||  |||||||||||||||||||||||||| |||||||||| ||||||    
T  35862024 acgacacagacacttacaattacattgaattatgtgattttttcaaattattagttgtgtc 35861964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 191
Target Start/End: Complemental strand, 21560564 - 21560521
Alignment:
Q  148 tacgacaccgacacttgtaattacattgaattatgtgatttttt 191  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  21560564 tacgacaccgacacttgtaattacactgaattatgtgatttttt 21560521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 23746947 - 23746868
Alignment:
Q  172 attgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtcc-gtgtccgtatctatgcttcatag 250  Q
    |||||||||||||||||| | ||||||| || ||||||||| | |||||||||||| || ||||| ||||||||||||||    
T  23746947 attgaattatgtgattttctcaaattataagttgtgtcagtgttcgtgtcgtgtccagtatccgtttctatgcttcatag 23746868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 250
Target Start/End: Complemental strand, 24105737 - 24105629
Alignment:
Q  150 cgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctg--------tgtcagtttccgtgtcgtgtccgtgtccgtatctat 241  Q
    |||| |||||||||||||||||| ||||| |||  ||||||| |||||||||||||        ||||||| |||||||||||||||| ||||||||  |    
T  24105737 cgactccgacacttgtaattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgtatccgtatccgt 24105638  T
Q  242 gcttcatag 250  Q
    |||||||||    
T  24105637 gcttcatag 24105629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 252
Target Start/End: Complemental strand, 27945101 - 27944989
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta--------gctgtgtcagtttccgtgtcgtgtcc-gtgtccgtatct 239  Q
    |||||||||||||||||||||||| |||||||||| ||||| | |||||||||        |  |||||||| |||||||||||||| |||||||||||     
T  27945101 acgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatcc 27945002  T
Q  240 atgcttcataggt 252  Q
     ||||||||||||    
T  27945001 gtgcttcataggt 27944989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 149 - 191
Target Start/End: Complemental strand, 18039059 - 18039017
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgatttttt 191  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  18039059 acgacaccgacacttgtaattacactgaattatgtgatttttt 18039017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 598285 - 598208
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| |||||||||||  |||||||||||||  ||||||||| ||||| |||||||| | ||||||||||| |||||    
T  598285 tcggacacgtgtcgtgtctgacaccgacacttacaattacatttaattacgtgattttcttaaattattagcggtgtc 598208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 7058486 - 7058414
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtc 221  Q
    |||||||| ||||||||||||||| |||||||  ||||||||| |||||||||| ||| ||||| | ||||||    
T  7058486 acgacaccaacacttgtaattacactgaattacatgattttttcaaattattagttgtatcagtgttcgtgtc 7058414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 11665441 - 11665501
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcag 211  Q
    |||| |||||||| |||||| | |||||||||||||||||| |||||||||| ||||||||    
T  11665441 gacatcgacacttataattagactgaattatgtgattttttcaaattattagttgtgtcag 11665501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 24146874 - 24146822
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaattattagc 203  Q
    ||||||||||| | |||||| |||||||||||||||||| |||||||||||||    
T  24146874 gacaccgacacatataattatattgaattatgtgattttctaaaattattagc 24146822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 28155634 - 28155570
Alignment:
Q  145 gtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||| |||||||||||||||||||||||  ||||||||| ||||| | ||||||||||| |||||    
T  28155634 gtgtccgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagcggtgtc 28155570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 32094019 - 32094079
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtga-ttttttaaaattattagctgtgt 208  Q
    |||||||||||| ||||||||||| |||||||||||| |||||| |||||||||| |||||    
T  32094019 acgacaccgacatttgtaattacactgaattatgtgatttttttcaaattattagttgtgt 32094079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 48438604 - 48438564
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgatttttt 191  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  48438604 gacaccgacacgtgtaattacattgaattatgtgatttttt 48438564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 165 - 228
Target Start/End: Complemental strand, 1656720 - 1656657
Alignment:
Q  165 taattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtccg 228  Q
    |||||||| ||||||||||||||||||||||   |||| |||||| || |||||||||||||||    
T  1656720 taattacactgaattatgtgattttttaaaaaatttagttgtgtcggtgtccgtgtcgtgtccg 1656657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 11272585 - 11272647
Alignment:
Q  149 acgacaccgacacttgtaattacattgaat--tatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||||||||||| |||||  ||||||||||||| ||||||| || ||||||    
T  11272585 acgacaccgacacttgtaattacactgaattatatgtgattttttcaaattatcagttgtgtc 11272647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 26733371 - 26733304
Alignment:
Q  142 gtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||| |||||||||||| | |||||| | |||||||||||||||| | ||||||||||| |||||    
T  26733371 gtcgtgtccgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtc 26733304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 42720891 - 42720950
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtca 210  Q
    ||||| ||||| | |||||||||| |||||||||||||||| ||||||||||| ||||||    
T  42720891 gacactgacacatataattacatttaattatgtgattttttcaaattattagcggtgtca 42720950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 191
Target Start/End: Complemental strand, 1885633 - 1885591
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgatttttt 191  Q
    ||||||||||||||||| ||||||||||||||||| |||||||    
T  1885633 acgacaccgacacttgtgattacattgaattatgtcatttttt 1885591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 191
Target Start/End: Complemental strand, 2334310 - 2334268
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgatttttt 191  Q
    |||||||||||||||||||||||| | ||||||||||||||||    
T  2334310 acgacaccgacacttgtaattacactaaattatgtgatttttt 2334268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 25956511 - 25956465
Alignment:
Q  143 tcgtgtacgacaccgacacttgtaattacattgaattatgtgatttt 189  Q
    |||||| |||||||||||||||| ||||||||||||||||| |||||    
T  25956511 tcgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 25956465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 20549860 - 20549791
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||| |||| |||||||||||| | |||||||| ||||||| |||||||| | ||||||||||| |||||    
T  20549860 gtgttgtgtccgacaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgtc 20549791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 148 - 209
Target Start/End: Complemental strand, 25822716 - 25822655
Alignment:
Q  148 tacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||||||||||||||| |||||| ||   |||||| |||||||||| ||||||    
T  25822716 tacgacaccgacacttgtaattacactgaattgtgattttttttcaaattattagttgtgtc 25822655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 228
Target Start/End: Complemental strand, 4024088 - 4024008
Alignment:
Q  148 tacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtccg 228  Q
    |||||| |||| |||| |||||| ||| |||||||| ||||||| |||||||||| |||||| || ||  |||||||||||    
T  4024088 tacgacgccgatacttataattatattaaattatgtcatttttttaaattattagttgtgtcggtgtctatgtcgtgtccg 4024008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 6028685 - 6028633
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    |||||||||||| ||||||||||||| |||||||| || |||| |||||||||    
T  6028685 acgacaccgacatttgtaattacattaaattatgttatattttcaaattatta 6028633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 165 - 228
Target Start/End: Complemental strand, 2424658 - 2424596
Alignment:
Q  165 taattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtccg 228  Q
    |||||||| |||||||||||||||| | ||||||||||| |||| ||| || ||||||||||||    
T  2424658 taattacactgaattatgtgattttctcaaattattagc-gtgttagtgtctgtgtcgtgtccg 2424596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 165 - 200
Target Start/End: Complemental strand, 3938187 - 3938152
Alignment:
Q  165 taattacattgaattatgtgattttttaaaattatt 200  Q
    ||||||||||||||||||||||||||| ||||||||    
T  3938187 taattacattgaattatgtgatttttttaaattatt 3938152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 149 - 200
Target Start/End: Original strand, 12843174 - 12843225
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattatt 200  Q
    ||||||| ||||| ||||||||||||||||||||| ||||| | ||||||||    
T  12843174 acgacactgacacatgtaattacattgaattatgtaattttatcaaattatt 12843225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 17851488 - 17851437
Alignment:
Q  152 acaccgacacttgtaattacattgaattatgtgattttttaaaattattagc 203  Q
    |||| ||||| | |||||||| |||||||||||||||| |||||||||||||    
T  17851488 acacagacacatataattacactgaattatgtgattttctaaaattattagc 17851437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 165 - 200
Target Start/End: Complemental strand, 27980840 - 27980805
Alignment:
Q  165 taattacattgaattatgtgattttttaaaattatt 200  Q
    ||||||||||||||||||| ||||||||||||||||    
T  27980840 taattacattgaattatgtcattttttaaaattatt 27980805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 1401093 - 1401031
Alignment:
Q  141 tgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagc 203  Q
    ||||||||  |||||||| |||| |||||||| |||||||||||| ||| | |||||||||||    
T  1401093 tgtcgtgtcggacaccgatacttataattacactgaattatgtgagtttctcaaattattagc 1401031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 209
Target Start/End: Complemental strand, 19206108 - 19206050
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||| | |||||| | |||||||||||||||| | ||||||||||| |||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtc 19206050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 33994281 - 33994223
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaatta 198  Q
    |||||||||  ||||||||||||||||||| || ||||||||||||  |||| ||||||    
T  33994281 gtgtcgtgtctgacaccgacacttgtaattgcactgaattatgtgaccttttcaaatta 33994223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 38143281 - 38143231
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    |||||| |||| | |||||||||| |||||||||||||||| |||||||||    
T  38143281 gacaccaacacatataattacattaaattatgtgattttttcaaattatta 38143231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 209
Target Start/End: Complemental strand, 41020570 - 41020496
Alignment:
Q  135 gatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||| ||||||||| | |||||||| | | |||||||| | |||||||||||||||  |||||||||| ||||||    
T  41020570 gatatgtgtcgtgttcaacaccgacgcatataattacactaaattatgtgatttttgtaaattattagttgtgtc 41020496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 11831481 - 11831432
Alignment:
Q  160 acttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||| | |||||| ||||||||| |||||||||| ||||||    
T  11831481 acttgtaattacactaaattatatgattttttcaaattattagttgtgtc 11831432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 18213025 - 18213078
Alignment:
Q  142 gtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaa 195  Q
    ||||||| |||||||||||| | |||||||| | |||||||||||||| |||||    
T  18213025 gtcgtgtccgacaccgacacatataattacactaaattatgtgattttctaaaa 18213078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 195
Target Start/End: Complemental strand, 640171 - 640127
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaa 195  Q
    ||||||||||| | |||||||| ||||||||||||||| ||||||    
T  640171 gacaccgacacatataattacactgaattatgtgatttgttaaaa 640127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 3554491 - 3554555
Alignment:
Q  135 gatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattat 199  Q
    |||| ||||||||| |||||||||||  | |||||||||| |||||||| ||||| | |||||||    
T  3554491 gatatgtgtcgtgtccgacaccgacatctataattacattaaattatgtaattttcttaaattat 3554555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 191
Target Start/End: Original strand, 13557750 - 13557782
Alignment:
Q  159 cacttgtaattacattgaattatgtgatttttt 191  Q
    |||||||||||||| ||||||||||||||||||    
T  13557750 cacttgtaattacactgaattatgtgatttttt 13557782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 17257990 - 17258030
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgatttttt 191  Q
    ||||||||||||| | ||||||||||||||||| |||||||    
T  17257990 gacaccgacacttatgattacattgaattatgttatttttt 17258030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 21930688 - 21930633
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctg 205  Q
    |||||| ||||||||||||||| | |||||||| | ||||||| |||||||||||||    
T  21930688 acgacatcgacacttgtaattaaaatgaattatctaatttttt-aaattattagctg 21930633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 22602709 - 22602749
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgatttt 189  Q
    ||||||||||||| | |||||||| ||||||||||||||||    
T  22602709 acgacaccgacacatataattacactgaattatgtgatttt 22602749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 29787384 - 29787428
Alignment:
Q  165 taattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||| |||||||||||||||| | ||||||||||| |||||    
T  29787384 taattacactgaattatgtgattttctcaaattattagcggtgtc 29787428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 32308180 - 32308120
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||| ||||| |  ||||||| |||||||||||||||| | ||||||||||| |||||    
T  32308180 acgacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtc 32308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 39138510 - 39138458
Alignment:
Q  143 tcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaa 195  Q
    |||||| |||||||||||  | |||||||| |||||||||||||||| |||||    
T  39138510 tcgtgtccgacaccgacatatataattacactgaattatgtgattttctaaaa 39138458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 40287352 - 40287415
Alignment:
Q  145 gtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||| ||| ||||||||||||||||||| |||| ||| ||||||||| |||||||| | ||||||    
T  40287352 gtgtccgataccgacacttgtaattacactgaa-tatatgattttttcaaattattcgttgtgtc 40287415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 2438709 - 2438780
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcag 211  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  2438709 gtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttgaaattattagctgtgtcag 2438780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 132 - 251
Target Start/End: Complemental strand, 37559054 - 37558938
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtc-gtgtccgtg 230  Q
    ||||| |||||||  || |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |    |||||| |||||||||    
T  37559054 tcggacacgtgtcaagtccgacaccgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcgg----cgtgtcagtgtccgtg 37558959  T
Q  231 tccgtatctatgcttcatagg 251  Q
    ||||||||  |||||||||||    
T  37558958 tccgtatccgtgcttcatagg 37558938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 132 - 206
Target Start/End: Complemental strand, 5040811 - 5040735
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgatt--ttttaaaattattagctgt 206  Q
    ||||| || |||||||| ||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||    
T  5040811 tcggacacatgtcgtgtccgacaccgacacttgtaattacattgaattatgtgattttttttcaaattattagctgt 5040735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 132 - 249
Target Start/End: Original strand, 38117141 - 38117261
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc--agtttccgtgtcgtgtcc-g 228  Q
    ||||| |||||| |||| ||||||| |||||||||||||||  ||| ||||||||||||| |||||||||||||||||   || || ||||||||||| |    
T  38117141 tcggacacgtgttgtgtccgacaccaacacttgtaattacaccgaagtatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcgtgtccgg 38117240  T
Q  229 tgtccgtatctatgcttcata 249  Q
    ||||||||||  |||||||||    
T  38117241 tgtccgtatccgtgcttcata 38117261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 144 - 212
Target Start/End: Original strand, 18255974 - 18256042
Alignment:
Q  144 cgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagt 212  Q
    ||||| |||||||||||||| |||||||||| |||||||||||||||| ||||||||| ||||||||||    
T  18255974 cgtgtccgacaccgacacttctaattacattaaattatgtgatttttttaaattattatctgtgtcagt 18256042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 252
Target Start/End: Original strand, 20539673 - 20539785
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagct--------gtgtcagtttccgtgtcgtgtcc-gtgtccgtatct 239  Q
    |||||||||||||||||||||||| | |||||| ||||||||| ||||||||||||        |||||||| |||||||||||||| |||||||||||     
T  20539673 acgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtccagtgtccgtatcc 20539772  T
Q  240 atgcttcataggt 252  Q
     ||||||||||||    
T  20539773 gtgcttcataggt 20539785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 132 - 201
Target Start/End: Complemental strand, 15972950 - 15972881
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    ||||| ||||||||||| ||||||||||||||||||||||| |||||| ||| ||||||| |||||||||    
T  15972950 tcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattgtgtaattttttcaaattatta 15972881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 30404840 - 30404901
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    ||||||||| |||| |||||||||||||||||| |||||||||||||||||| |||||||||    
T  30404840 gtgtcgtgtccgacgccgacacttgtaattacactgaattatgtgattttttcaaattatta 30404901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 30717529 - 30717594
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagttt 214  Q
    |||||| ||||||||||||||||| |||||||||||||||||| |||||||||||| |||| ||||    
T  30717529 acgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctttgtcggttt 30717594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 44860380 - 44860303
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtc 226  Q
    ||||||||||||| | |||||||| ||||||||| |||||| | ||||||||||| |||||||| |||||||||||||    
T  44860380 acgacaccgacacatataattacactgaattatgcgattttctcaaattattagcggtgtcagtgtccgtgtcgtgtc 44860303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 11223864 - 11223924
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcag 211  Q
    |||||||||||||||||||||| |||||||||| ||||||| ||| |||||||||||||||    
T  11223864 gacaccgacacttgtaattacactgaattatgttattttttcaaaatattagctgtgtcag 11223924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 6940326 - 6940255
Alignment:
Q  138 acgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||  || ||||||||||||||||||| | |||||||| | |||||||||||||||||||||||    
T  6940326 acgtgtcgtgtcggataccgacacttgtaattacacttaattatgtaactttttaaaattattagctgtgtc 6940255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 18841003 - 18841074
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcag 211  Q
    |||||||||  |||||||||||||||||||||| | |||||||| ||||||| |||||||||| ||||||||    
T  18841003 gtgtcgtgtctgacaccgacacttgtaattacacttaattatgtaattttttcaaattattagttgtgtcag 18841074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 144 - 250
Target Start/End: Original strand, 19536391 - 19536507
Alignment:
Q  144 cgtgtacgacaccgacacttgtaattacattgaattatgtga-ttttttaaaattattagct--------gtgtcagtttccgtgtcgtgtcc-gtgtcc 233  Q
    ||||| ||||||||||||||||||||||| |||||||||||| |||||| |||||||||| |        |||||| | |||||||||||||| ||||||    
T  19536391 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtcc 19536490  T
Q  234 gtatctatgcttcatag 250  Q
    |||||| ||||||||||    
T  19536491 gtatctgtgcttcatag 19536507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 21624332 - 21624266
Alignment:
Q  144 cgtgtacgacaccgacacttgtaattacattgaattatg-tgattttttaaaattattagctgtgtc 209  Q
    ||||| ||||||||||||||||||||||| ||||||||| |  ||||||||||||||||||||||||    
T  21624332 cgtgtccgacaccgacacttgtaattacactgaattatgctatttttttaaaattattagctgtgtc 21624266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 974807 - 974747
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||||||||||| ||||| ||||||| |||| |||||||||| ||||||    
T  974807 acgacaccgacacttgtaattacactgaataatgtgatcttttcaaattattagttgtgtc 974747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 18422027 - 18421971
Alignment:
Q  145 gtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    |||| ||||||||||||||||||||||| ||||||||||||| |||| |||||||||    
T  18422027 gtgttcgacaccgacacttgtaattacactgaattatgtgatatttttaaattatta 18421971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 209
Target Start/End: Original strand, 21374706 - 21374758
Alignment:
Q  157 gacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||| |||||||||| ||||||| |||||||||||||||||    
T  21374706 gacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtc 21374758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 12224300 - 12224241
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgatttttt 191  Q
    ||||| |||| |||||| |||||||||||||||||||||||||| |||||| ||||||||    
T  12224300 tcggacacgtatcgtgtccgacaccgacacttgtaattacattggattatgggatttttt 12224241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 5367269 - 5367199
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattag 202  Q
    ||||||| ||||||||| |||||||||||| | |||||||| |||||||||||||||  | ||||||||||    
T  5367269 tcggatatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttcctcaaattattag 5367199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 12668422 - 12668475
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattag 202  Q
    ||||||||||||||| |||||||| |||||||||| ||||||| ||||||||||    
T  12668422 acgacaccgacacttataattacactgaattatgtcattttttcaaattattag 12668475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 15657924 - 15657871
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattag 202  Q
    |||||||||||| ||||||||||| |||||||||||||||||  ||||||||||    
T  15657924 acgacaccgacatttgtaattacactgaattatgtgatttttacaaattattag 15657871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 20473387 - 20473322
Alignment:
Q  144 cgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| ||||| ||||||||||||||||| |||||||| ||| ||||| |||||||||| ||||||    
T  20473387 cgtgtccgacatcgacacttgtaattacactgaattatatgagttttttaaattattagttgtgtc 20473322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 33153484 - 33153431
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattag 202  Q
    ||||||| |||||||||||||||| |||||||||||||||||| |||| |||||    
T  33153484 acgacacggacacttgtaattacactgaattatgtgatttttttaaatcattag 33153431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 38442366 - 38442309
Alignment:
Q  150 cgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtg 207  Q
    |||||||||||||| |||||| |||||||||||||||||||| |||| ||||| ||||    
T  38442366 cgacaccgacacttataattatattgaattatgtgatttttttaaatcattagttgtg 38442309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 18420436 - 18420492
Alignment:
Q  152 acaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgt 208  Q
    |||||||||||| ||||| ||||||||||||||||||| | ||||||||||| ||||    
T  18420436 acaccgacacttataattgcattgaattatgtgattttctcaaattattagcagtgt 18420492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 24894449 - 24894389
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||| ||| |||||| ||||| || |||||||||||||||||| |||||||||||||||||    
T  24894449 acgaaaccaacacttttaattgcactgaattatgtgatttttttaaattattagctgtgtc 24894389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 36756343 - 36756403
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||||| |||||||| |||||||||| |||| || |||||||||| ||||||    
T  36756343 acgacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtc 36756403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 14996224 - 14996283
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtga-ttttttaaaattattagctgtgtc 209  Q
    |||||||||||||||||||||| | |||||| ||| |||||| |||||||||||||||||    
T  14996224 gacaccgacacttgtaattacactaaattatatgatttttttcaaattattagctgtgtc 14996283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 20242715 - 20242786
Alignment:
Q  138 acgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||| |||| |||||||||||| | |||||||| |||||||||||||||| |||||  ||||| ||||||    
T  20242715 acgtgttgtgtccgacaccgacacatataattacactgaattatgtgattttctaaaaaaattagttgtgtc 20242786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 28596546 - 28596487
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgatttttt 191  Q
    ||||| ||||||||||| |||||||||||||| |||||||| ||| ||||||||| ||||    
T  28596546 tcggacacgtgtcgtgtccgacaccgacacttataattacactgacttatgtgatgtttt 28596487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 30335476 - 30335417
Alignment:
Q  150 cgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||| ||||||||||| | |||||||| ||||||| |||||||||| ||||||    
T  30335476 cgacaccgacatttgtaattacactaaattatgtcattttttcaaattattagttgtgtc 30335417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 200
Target Start/End: Complemental strand, 37419803 - 37419752
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattatt 200  Q
    ||||||||| |||||||||||||| |||||| ||||||||||| ||||||||    
T  37419803 acgacaccggcacttgtaattacactgaattttgtgattttttcaaattatt 37419752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 43585993 - 43586044
Alignment:
Q  138 acgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgatttt 189  Q
    |||| |||||| |||||||||||||||| ||||||||||||||||| |||||    
T  43585993 acgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 43586044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 12940941 - 12940995
Alignment:
Q  156 cgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtca 210  Q
    ||||| ||||||||||| |||||||| ||||||||| |||||||||| |||||||    
T  12940941 cgacatttgtaattacactgaattatatgattttttcaaattattagttgtgtca 12940995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 191
Target Start/End: Original strand, 23058441 - 23058483
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgatttttt 191  Q
    |||||||||||||||||||||||| || |||||||||||||||    
T  23058441 acgacaccgacacttgtaattacactggattatgtgatttttt 23058483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 209
Target Start/End: Original strand, 34221502 - 34221556
Alignment:
Q  155 ccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||||| ||| |||||||||  |||||| |||||||||||||||||    
T  34221502 ccgacacttgtaattgcatagaattatgtatttttttcaaattattagctgtgtc 34221556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 31808146 - 31808077
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||| | |||| ||||| | |||||||| |||||||||||||||| | ||||||||||| |||||    
T  31808146 gtgtcgtgttcaacactgacacatataattacactgaattatgtgattttgttaaattattagcggtgtc 31808077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 37411226 - 37411303
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| ||| ||||||| ||||| |||||| | |||| ||| |||||||||||||||| | ||||||||||| |||||    
T  37411226 tcggacacgcgtcgtgttcgacatcgacacatataatcacactgaattatgtgattttctcaaattattagcggtgtc 37411303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 44605141 - 44605190
Alignment:
Q  152 acaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    |||||||||| ||||||||||||||||||||| ||||| | |||||||||    
T  44605141 acaccgacacatgtaattacattgaattatgttattttctcaaattatta 44605190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 228
Target Start/End: Original strand, 18631421 - 18631485
Alignment:
Q  165 taattacattgaattatgtga-ttttttaaaattattagctgtgtcagtttccgtgtcgtgtccg 228  Q
    |||||||||||||| |||||| |||||| ||||||||||  |||| ||| |||||||||||||||    
T  18631421 taattacattgaatgatgtgatttttttcaaattattagaggtgttagtgtccgtgtcgtgtccg 18631485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 250
Target Start/End: Complemental strand, 23718082 - 23717977
Alignment:
Q  153 caccgacacttgtaattacattgaattatgtgattttttaaaattattagc--------tgtgtcagtttccgtgtcgtgtccgtgtccgtatctatgct 244  Q
    ||||||||| | |||||||| |||||||||||| ||| | |||||||||||        ||||||||| |||||||| |||||||||| |||||  ||||    
T  23718082 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtccgtgtctgtatccgtgct 23717983  T
Q  245 tcatag 250  Q
    ||||||    
T  23717982 tcatag 23717977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 250
Target Start/End: Complemental strand, 24105754 - 24105649
Alignment:
Q  153 caccgacacttgtaattacattgaattatgtgattttttaaaattattagc--------tgtgtcagtttccgtgtcgtgtccgtgtccgtatctatgct 244  Q
    ||||||||| | |||||||| |||||||||||| ||| | |||||||||||        ||||||||| |||||||| |||||||||| |||||  ||||    
T  24105754 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtccgtgtctgtatccgtgct 24105655  T
Q  245 tcatag 250  Q
    ||||||    
T  24105654 tcatag 24105649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 28677953 - 28677909
Alignment:
Q  165 taattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||| |||||||||||||||||| ||||||||||| |||||    
T  28677953 taattacactgaattatgtgattttttcaaattattagcggtgtc 28677909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 39323316 - 39323264
Alignment:
Q  157 gacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||| |||||||||| ||||| | ||||||||||| |||||    
T  39323316 gacacttgtaattacactgaattatgtaattttgtcaaattattagcggtgtc 39323264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 34691799 - 34691858
Alignment:
Q  144 cgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagc 203  Q
    ||||| |||||||||||| | |||||||| |||||||| ||||||| | |||||||||||    
T  34691799 cgtgtccgacaccgacacatataattacactgaattatatgattttatcaaattattagc 34691858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 34714211 - 34714270
Alignment:
Q  144 cgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagc 203  Q
    ||||| |||||||||||| | |||||||| |||||||| ||||||| | |||||||||||    
T  34714211 cgtgtccgacaccgacacatataattacactgaattatatgattttatcaaattattagc 34714270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 4882695 - 4882749
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagc 203  Q
    |||||| ||||||||||||||||| |||||||| | ||||||| |||| ||||||    
T  4882695 acgacatcgacacttgtaattacactgaattatatcattttttcaaataattagc 4882749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 209
Target Start/End: Complemental strand, 21091781 - 21091723
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| |||||||||||||||| |||| ||||| ||||| | ||||||||||| |||||    
T  21091781 gacactgacacttgtaattacactgaagtatgttattttcttaaattattagcggtgtc 21091723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 42832277 - 42832335
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||| |||||||| |||| ||||| ||||| | ||||||||||| |||||    
T  42832277 gacaccgacacttataattacactgaaatatgtaattttctcaaattattagcggtgtc 42832335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 14450797 - 14450834
Alignment:
Q  152 acaccgacacttgtaattacattgaattatgtgatttt 189  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  14450797 acactgacacttgtgattacattgaattatgtgatttt 14450834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 201
Target Start/End: Complemental strand, 18571049 - 18570980
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    ||||||| || |||||| |||||| ||||| | | ||||||||||||||||| ||||| | |||||||||    
T  18571049 tcggatatgtatcgtgttcgacactgacacatatgattacattgaattatgtcattttctcaaattatta 18570980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 18622666 - 18622613
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattag 202  Q
    |||||||| |||| | |||||||| |||||||||||||||| | ||||||||||    
T  18622666 acgacaccaacacgtataattacactgaattatgtgattttattaaattattag 18622613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 29176495 - 29176552
Alignment:
Q  152 acaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| |||||| |||||||| ||||||||||||  |||| ||||||||| |||||||    
T  29176495 acaccaacacttataattacactgaattatgtgaccttttcaaattattaactgtgtc 29176552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 44635557 - 44635520
Alignment:
Q  150 cgacaccgacacttgtaattacattgaattatgtgatt 187  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  44635557 cgacaccgacacttgtaattacactgaattacgtgatt 44635520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 1886892 - 1886936
Alignment:
Q  164 gtaattacattgaattatgtgattttttaaaattattagctgtgt 208  Q
    |||||||||||||||||||| | ||||| ||||||||| ||||||    
T  1886892 gtaattacattgaattatgtaaatttttcaaattattaactgtgt 1886936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 21616806 - 21616762
Alignment:
Q  165 taattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||| |||||||||||||||| | ||||||||||| |||||    
T  21616806 taattacactgaattatgtgattttctcaaattattagcggtgtc 21616762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 21782833 - 21782877
Alignment:
Q  165 taattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||| |||||||||||||||| | ||||||||||| |||||    
T  21782833 taattacactgaattatgtgattttctcaaattattagcagtgtc 21782877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 201
Target Start/End: Original strand, 29367381 - 29367421
Alignment:
Q  162 ttgtaattacattgaattatgtga-ttttttaaaattatta 201  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  29367381 ttgtaattacactgaattatgtgatttttttaaaattatta 29367421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 31018655 - 31018591
Alignment:
Q  144 cgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgt 208  Q
    ||||| |||||||||||| | |||||||| | ||| |||||||||| | ||||||||||| ||||    
T  31018655 cgtgtccgacaccgacacctataattacactaaatcatgtgattttctgaaattattagcggtgt 31018591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 33884115 - 33884071
Alignment:
Q  145 gtgtacgacaccgacacttgtaattacattgaattatgtgatttt 189  Q
    |||| ||||||||||||||||||||||| ||||| |||| |||||    
T  33884115 gtgttcgacaccgacacttgtaattacactgaatcatgtcatttt 33884071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 34784981 - 34785041
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||| | |||||||| | |||||||||||||| |||||  ||||| ||||||    
T  34784981 acgacaccgacacatataattacactaaattatgtgattttctaaaaaaattagttgtgtc 34785041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 3e-24; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 21191038 - 21191115
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| |||||| |||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  21191038 tcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 21191115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 138 - 208
Target Start/End: Original strand, 21576733 - 21576803
Alignment:
Q  138 acgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgt 208  Q
    ||||||||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  21576733 acgtgtcgtgtccgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgt 21576803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 149 - 250
Target Start/End: Complemental strand, 31084383 - 31084279
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc--agtttccgtgtcgtgtcc-gtgtccgtatctatgctt 245  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||   || || ||||||||||| |||||| | ||| |||||    
T  31084383 acgacatcgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcgtgtccggtgtccatgtctgtgctt 31084284  T
Q  246 catag 250  Q
    |||||    
T  31084283 catag 31084279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 139 - 209
Target Start/End: Complemental strand, 6247692 - 6247622
Alignment:
Q  139 cgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||| ||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||    
T  6247692 cgtgccgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtc 6247622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 39698601 - 39698539
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcag 211  Q
    ||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  39698601 acgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcag 39698539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 42893437 - 42893360
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| |||||| ||||  |||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||    
T  42893437 tcggacacgtgttgtgtctgacaccgacacttgtaattacactggattatgtgattttttcaaattattagctgtgtc 42893360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 21522810 - 21522750
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||    
T  21522810 acgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtc 21522750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 21533376 - 21533316
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||    
T  21533376 acgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtc 21533316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 8420086 - 8420027
Alignment:
Q  150 cgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  8420086 cgacaccgacacttgtaattacattgaattatgttattttttcaaattattagctatgtc 8420027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 15405062 - 15405160
Alignment:
Q  157 gacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc------agtttccgtgtcgtgtccgtgtccgtatctatgcttcata 249  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||| ||||||      ||| |||||||||||||| ||| |||||| ||||||||||    
T  15405062 gacacttgtaattacattgaattatatgattttttcaaattattagttgtgtcagtgttagtgtccgtgtcgtgtccatgttcgtatccatgcttcata 15405160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 15884057 - 15883987
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgatt-ttttaaaattattagctgtgtc 209  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||| |||| |||||||| ||||||||    
T  15884057 gtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttttaaattatttgctgtgtc 15883987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 148 - 209
Target Start/End: Complemental strand, 10298630 - 10298569
Alignment:
Q  148 tacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||||||||||||||| ||||||||| ||||| |||||||||| ||||||    
T  10298630 tacgacaccgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 10298569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 7677765 - 7677705
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||||| ||||| || |||||||||||||||||| |||||||||||||||||    
T  7677765 acgacaccgacacttctaattgcactgaattatgtgattttttcaaattattagctgtgtc 7677705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 13287398 - 13287458
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||||| ||||| |||||||||||||||||| ||||||||| |||||||    
T  13287398 acgacaccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtc 13287458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 33178089 - 33178025
Alignment:
Q  145 gtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||| ||||||||||||||||||||||| | |||||||||||||||| |||||||||| ||||||    
T  33178089 gtgtccgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtc 33178025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 149 - 228
Target Start/End: Original strand, 6471888 - 6471967
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtccg 228  Q
    |||||||| |||| | |||||||| |||||||||||||||| | ||||||||||| |||||||| |||||||| ||||||    
T  6471888 acgacacccacacatataattacactgaattatgtgattttctcaaattattagccgtgtcagtgtccgtgtcatgtccg 6471967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 155 - 250
Target Start/End: Complemental strand, 14674323 - 14674231
Alignment:
Q  155 ccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtc-gtgtccgtgtccgtatctatgcttcatag 250  Q
    |||||||||||||||||| | |||||||||||||||| ||||||||||||||||| |    |||||| ||||||||||| |||||  ||||||||||    
T  14674323 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcgg----cgtgtcagtgtccgtgtctgtatccgtgcttcatag 14674231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 5894832 - 5894914
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtccgtgtccgtat 237  Q
    |||||||||||||||||| ||| ||| |||||| ||||||||| |||||||||| ||||      ||||||||||||||||||||||||    
T  5894832 acgacaccgacacttgtagttagattaaattatatgattttttcaaattattagttgtg------tccgtgtcgtgtccgtgtccgtat 5894914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 148 - 209
Target Start/End: Complemental strand, 41633796 - 41633735
Alignment:
Q  148 tacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||| ||||||||||| |||||||||| | ||||| |||||||||||||||||    
T  41633796 tacgacaccgacatttgtaattacactgaattatgtaaatttttcaaattattagctgtgtc 41633735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 17177025 - 17177081
Alignment:
Q  152 acaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgt 208  Q
    ||||||||||||||||||||| |||||| | ||||||||| ||||||||||||||||    
T  17177025 acaccgacacttgtaattacaatgaattttttgattttttcaaattattagctgtgt 17177081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 19579761 - 19579701
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||||||||||| || | |||||||||||||| | |||||||||||||||||    
T  19579761 acgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtc 19579701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 21542090 - 21542030
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||||||||||| |||||||||| || |||| |||||||||| ||||||    
T  21542090 acgacaccgacacttgtaattacactgaattatgttatctttttaaattattagttgtgtc 21542030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 209
Target Start/End: Original strand, 7218271 - 7218326
Alignment:
Q  154 accgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||||||||| ||||||||||||||| || |||||||||||| ||||    
T  7218271 accgacacttgtaattacactgaattatgtgatttatttaaattattagctctgtc 7218326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 24906292 - 24906359
Alignment:
Q  141 tgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgt 208  Q
    |||| ||| ||| ||||||||||||||||||| |||||||||| ||||||| ||||||||| ||||||    
T  24906292 tgtcatgtccgataccgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgt 24906359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 21351906 - 21351964
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||||||||| |||||||||||| |||||  ||||||||| ||||||    
T  21351906 gacaccgacacttgtaattacactgaattatgtgactttttccaattattagttgtgtc 21351964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 28588659 - 28588725
Alignment:
Q  135 gatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    |||| ||||||||| |||||||||||| | |||||||| |||||||||||||||| | |||||||||    
T  28588659 gatatgtgtcgtgtccgacaccgacacctataattacactgaattatgtgattttctcaaattatta 28588725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 149 - 253
Target Start/End: Complemental strand, 2436982 - 2436875
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc--agtttccgtgtcgtgtcc-gtgtccgtatctatgctt 245  Q
    ||||||||||||| | |||| |||  ||||||||||||||||  ||||||||||| |||||   || || ||||||||||| |||||||||||  |||||    
T  2436982 acgacaccgacacatataatcacaacgaattatgtgatttttgcaaattattagcggtgtcggcgtgtcagtgtcgtgtccggtgtccgtatccgtgctt 2436883  T
Q  246 cataggta 253  Q
    ||||||||    
T  2436882 cataggta 2436875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 30502378 - 30502446
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgt 208  Q
    ||||||||| |||||||||||| | |||||||| ||||||| |||||||| | ||||||||||| ||||    
T  30502378 gtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30502446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 30542721 - 30542789
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgt 208  Q
    ||||||||| |||||||||||| | |||||||| ||||||| |||||||| | ||||||||||| ||||    
T  30542721 gtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30542789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 37328843 - 37328903
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||| |||||||||| |||||| ||||||||||  |||||||| ||||||||    
T  37328843 acgacaccgacacatgtaattacactgaattttgtgatttttacaaattatttgctgtgtc 37328903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 43001856 - 43001800
Alignment:
Q  153 caccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||| ||||||||||||||| |||||||||| ||||||| ||||||||||| |||||    
T  43001856 caccaacacttgtaattacactgaattatgtaattttttcaaattattagcagtgtc 43001800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 154 - 209
Target Start/End: Complemental strand, 12160007 - 12159952
Alignment:
Q  154 accgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||| ||||||||||||| ||||||||| |||||| |||||||||| ||||||    
T  12160007 accgacatttgtaattacattaaattatgtgttttttttaaattattagttgtgtc 12159952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 27932306 - 27932235
Alignment:
Q  138 acgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||| ||||||| | | ||||||||||| |||||||||| ||||| | ||||||||||| |||||    
T  27932306 acgtgtcgtgtccgacaccaagatttgtaattacactgaattatgtaattttctcaaattattagcggtgtc 27932235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 151 - 209
Target Start/End: Complemental strand, 30135372 - 30135313
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgatt-ttttaaaattattagctgtgtc 209  Q
    |||||||||||||||||||||| ||| |||||||||| |||| |||||||||| ||||||    
T  30135372 gacaccgacacttgtaattacaatgagttatgtgatttttttcaaattattagttgtgtc 30135313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 43564958 - 43564891
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattat 199  Q
    ||||| || |||||||| |||||||||||||| |||||||| | |||||||||||||||  |||||||    
T  43564958 tcggacacatgtcgtgtccgacaccgacacttataattacactaaattatgtgatttttccaaattat 43564891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 11685999 - 11685898
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcag--tttccgtgtcgtgtccgtgtccgtatctatgcttc 246  Q
    ||||||||||||| | |||||||| | ||||||| || ||| | ||||||||||| ||||| |  | || ||||||||||||||||||||||  ||||||    
T  11685999 acgacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtcggcatgtcagtgtcgtgtccgtgtccgtatccgtgcttc 11685900  T
Q  247 at 248  Q
    ||    
T  11685899 at 11685898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 15382538 - 15382477
Alignment:
Q  150 cgacaccgacacttgtaattacattgaattatgtga--ttttttaaaattattagctgtgtc 209  Q
    ||||||||||||||||||||| | |||||||| |||  |||||| |||||||||||||||||    
T  15382538 cgacaccgacacttgtaattatactgaattatatgattttttttcaaattattagctgtgtc 15382477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 32766958 - 32767020
Alignment:
Q  165 taattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtcc 227  Q
    ||||||||||||||| || |||||| | ||||||||||| ||||| || ||||||||||||||    
T  32766958 taattacattgaattgtgcgattttctcaaattattagcggtgtcggtgtccgtgtcgtgtcc 32767020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 209
Target Start/End: Complemental strand, 41995530 - 41995471
Alignment:
Q  148 tacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||| |||||||||||  ||||||||||||||||||||||||||  ||||||||| ||||||    
T  41995530 tacggcaccgacactt--aattacattgaattatgtgattttttcgaattattagttgtgtc 41995471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 42029821 - 42029767
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaa 194  Q
    ||||||||| ||||||||| || | ||||||||||||||||||||||||| ||||    
T  42029821 gtgtcgtgtccgacaccgatacatataattacattgaattatgtgattttctaaa 42029767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 3966563 - 3966503
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||| | |||||||| |||||| ||||||||| | ||||||||||| |||||    
T  3966563 acgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtc 3966503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 206
Target Start/End: Complemental strand, 14422968 - 14422907
Alignment:
Q  143 tcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgt 206  Q
    |||||| ||||| ||| |||| |||||||| |||||||||||||||||  ||||||||||||||    
T  14422968 tcgtgtccgacatcgaaacttataattacactgaattatgtgattttt--aaattattagctgt 14422907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 201
Target Start/End: Original strand, 17925167 - 17925223
Alignment:
Q  145 gtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    |||| |||||||||||| | | ||||||||||||||||||||||| | |||||||||    
T  17925167 gtgttcgacaccgacacatattattacattgaattatgtgattttcttaaattatta 17925223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 30183609 - 30183549
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||||||||| |  |||| ||||||| |||| |||||||||| ||||||    
T  30183609 acgacaccgacacttgtaattaaaccgaataatgtgatattttcaaattattagttgtgtc 30183549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 40131682 - 40131618
Alignment:
Q  148 tacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagt 212  Q
    ||||||||||| | || |||||| | |||||||||||||||||| |||||||||| ||| |||||    
T  40131682 tacgacaccgatatttataattaaactgaattatgtgattttttcaaattattagttgtatcagt 40131618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 23012398 - 23012461
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagc 203  Q
    ||||||||| | |||||||||| | |||||||||| |||||| ||||||| | |||||||||||    
T  23012398 gtgtcgtgtccaacaccgacacatataattacattaaattatatgattttctcaaattattagc 23012461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 32630717 - 32630796
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcag 211  Q
    ||||| ||||||||| | |||||| ||||| | ||||||||||||||||| | ||||| | ||||||||| | |||||||    
T  32630717 tcggacacgtgtcgtatccgacactgacacatataattacattgaattatataattttctcaaattattatcggtgtcag 32630796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 191
Target Start/End: Complemental strand, 12199990 - 12199948
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgatttttt 191  Q
    |||||||||||||||||||||  | ||||||||||||||||||    
T  12199990 acgacaccgacacttgtaattgtactgaattatgtgatttttt 12199948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 211
Target Start/End: Original strand, 22423811 - 22423873
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcag 211  Q
    ||||||||||||  | |||||| |||||||||||||||||| | ||||||||||  |||||||    
T  22423811 acgacaccgacatatataattatattgaattatgtgattttctcaaattattagtagtgtcag 22423873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 212
Target Start/End: Original strand, 24273015 - 24273092
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagt 212  Q
    ||||||| ||||||||||| |||||   || | |||||||| |||||||||||||||| | |||||| || ||||||||||    
T  24273015 tcggatatgtgtcgtgtaccacacc---acatataattacactgaattatgtgattttctcaaattaataactgtgtcagt 24273092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 212
Target Start/End: Complemental strand, 24389199 - 24389122
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagt 212  Q
    ||||||| ||||||||||| |||||   || | |||||||| |||||||||||||||| | |||||| || ||||||||||    
T  24389199 tcggatatgtgtcgtgtaccacacc---acatataattacactgaattatgtgattttctcaaattaataactgtgtcagt 24389122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 212
Target Start/End: Complemental strand, 6770610 - 6770540
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagt 212  Q
    ||||||||| |||||| ||||| |  || |||| |||||||||||||||| | |||||||||| |||||||||    
T  6770610 gtgtcgtgtccgacactgacacat--aagtacactgaattatgtgattttcttaaattattagttgtgtcagt 6770540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 16203785 - 16203854
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| ||| |||||||||||| | |||||||| | ||||||| |||||| | ||||||||||| |||||    
T  16203785 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttctcaaattattagcagtgtc 16203854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 17593737 - 17593822
Alignment:
Q  165 taattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtccgtgtccgtatctatgcttcatag 250  Q
    |||||||| ||||||| |||||||| | ||||||||||| || ||| |   ||||||||||||||||  |||||  ||||||||||    
T  17593737 taattacactgaattacgtgattttctcaaattattagcggtttcaatgggcgtgtcgtgtccgtgtttgtatccgtgcttcatag 17593822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 18421831 - 18421900
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||| |||| ||||||| | |||||||| || ||||||||||||| | ||||||| ||| |||||    
T  18421831 gtgtcgtgtccgacgccgacacatataattacactggattatgtgattttctcaaattatcagcagtgtc 18421900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 38749565 - 38749614
Alignment:
Q  152 acaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    ||||| |||| | ||||||||||||||||||| ||||||| |||||||||    
T  38749565 acaccaacacatataattacattgaattatgtcattttttcaaattatta 38749614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 2952309 - 2952265
Alignment:
Q  169 tacattgaattatgtgatttttta-aaattattagctgtgtcagt 212  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||    
T  2952309 tacactgaattatgtgattttttttaaattattagctgtgtcagt 2952265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 16374341 - 16374393
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    ||||||||||||| |||||||||| ||| |||||| |||||||  ||||||||    
T  16374341 acgacaccgacacatgtaattacactgatttatgttatttttttcaattatta 16374393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 212
Target Start/End: Complemental strand, 17088337 - 17088281
Alignment:
Q  157 gacacttgtaattacattgaattatgtgatt-ttttaaaattattagctgtgtcagt 212  Q
    |||||||||||| ||| | |||||||||||| |||| |||||||||| |||||||||    
T  17088337 gacacttgtaatcacactaaattatgtgatttttttcaaattattagatgtgtcagt 17088281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 18316952 - 18316984
Alignment:
Q  177 attatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||||||||||||| ||||||    
T  18316952 attatgtgattttttaaaattattagttgtgtc 18316984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 18592133 - 18592073
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||| ||| | ||||||||||||||||||| ||||| | ||| ||||||| |||||    
T  18592133 acgacaccggcacatataattacattgaattatgtaattttcttaaaatattagcggtgtc 18592073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 19167577 - 19167617
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgatttttt 191  Q
    ||||||||||||||| ||||||||||||| ||| |||||||    
T  19167577 gacaccgacacttgtgattacattgaattgtgtcatttttt 19167617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 21814321 - 21814261
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||| | |||||||| || ||| ||||||||| |||||  ||||||||||||    
T  21814321 acgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtc 21814261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 22299492 - 22299539
Alignment:
Q  161 cttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||| | ||||| |||||||||||| |||||||||||||||||    
T  22299492 cttgtaattatactgaatcatgtgatttttt-aaattattagctgtgtc 22299539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 201
Target Start/End: Complemental strand, 30098370 - 30098334
Alignment:
Q  165 taattacattgaattatgtgattttttaaaattatta 201  Q
    ||||||||||||||||||||||||| | |||||||||    
T  30098370 taattacattgaattatgtgattttctcaaattatta 30098334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 30136678 - 30136722
Alignment:
Q  154 accgacacttgtaattacattgaattatgtgattttttaaaatta 198  Q
    ||||||| || |||||||||||||||| || ||||||||||||||    
T  30136678 accgacatttataattacattgaattacgtaattttttaaaatta 30136722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 41091256 - 41091316
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||| |||||| | |||||||| |||||||||||||||| | |||| |||||| |||||    
T  41091256 acgacatcgacacatataattacactgaattatgtgattttctcaaatcattagcagtgtc 41091316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 1e-23; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 145 - 221
Target Start/End: Original strand, 51206348 - 51206424
Alignment:
Q  145 gtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtc 221  Q
    |||| ||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||| ||||||||    
T  51206348 gtgtccgacaccgacacttgtatttacactgaattatgtgattttttcaaattattagctgtgtcagtgtccgtgtc 51206424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 132 - 228
Target Start/End: Complemental strand, 28918080 - 28917974
Alignment:
Q  132 tcggatacgtgtcgtgt--acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagct--------gtgtcagtttccgtgtc 221  Q
    ||||| |||||||||||  |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||        |||||||||||||||||    
T  28918080 tcggacacgtgtcgtgtccacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgtgtc 28917981  T
Q  222 gtgtccg 228  Q
    |||||||    
T  28917980 gtgtccg 28917974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 132 - 250
Target Start/End: Complemental strand, 55401152 - 55401025
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtg--------tcagtttccgtgtcgt 223  Q
    ||||| ||||||||||| ||||||||||||||||||||||| | |||||||||||||||| |||||||||| ||||        ||||| ||||||||||    
T  55401152 tcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtatcagtgtccgtgtcgt 55401053  T
Q  224 gtcc-gtgtccgtatctatgcttcatag 250  Q
     ||| |||||||||||| ||||||||||    
T  55401052 atccggtgtccgtatctgtgcttcatag 55401025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 10955029 - 10954952
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| ||||||||||| |||||||||||||||| |||||| |||||||||||||||||| |||||||||| ||||||    
T  10955029 tcggacacgtgtcgtgtccgacaccgacacttgtgattacactgaattatgtgattttttcaaattattagttgtgtc 10954952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 1509599 - 1509536
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagt 212  Q
    |||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||    
T  1509599 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagt 1509536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 144 - 251
Target Start/End: Complemental strand, 7928515 - 7928409
Alignment:
Q  144 cgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtccgtgtccgtatctatgc 243  Q
    ||||| |||||||||||| | |||||||| |||||||||||||||||| ||||||||||| ||||| || | | |||| ||||||||||||||||  |||    
T  7928515 cgtgtccgacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcggtgt-cttgtcatgtccgtgtccgtatcggtgc 7928417  T
Q  244 ttcatagg 251  Q
    ||||||||    
T  7928416 ttcatagg 7928409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 149 - 252
Target Start/End: Complemental strand, 14209173 - 14209074
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtccgtgtccgtatctatgcttcat 248  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||| |    ||||||||||| ||||||| |||  |||||||     
T  14209173 acgacactgacacttgtaattacactgaattatgtgattttttaaaattattagttgtgtcgg----cgtgtcgtgtctgtgtccgcatccgtgcttcag 14209078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 26508166 - 26508108
Alignment:
Q  153 caccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcag 211  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  26508166 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcag 26508108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 24633391 - 24633491
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc--agtttccgtgtcgtgtccgtgtccgtat 237  Q
    ||||||||| | |||||||||| | |||||||||||||||| |||||||||  ||||||||| |||||||  ||| ||| ||||||||||||||||||||    
T  24633391 gtgtcgtgtccaacaccgacacatataattacattgaattacgtgatttttccaaattattaactgtgtcagagtgtccatgtcgtgtccgtgtccgtat 24633490  T
Q  238 c 238  Q
    |    
T  24633491 c 24633491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 27505306 - 27505246
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||    
T  27505306 acgacaccgacacttgtaattacacttaattatgtgatttttaaaaattattagctgtgtc 27505246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 49651785 - 49651845
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||    
T  49651785 acgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattagccgtgtc 49651845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 148 - 250
Target Start/End: Complemental strand, 34910378 - 34910279
Alignment:
Q  148 tacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtc-cgtgtccgtatctatgcttc 246  Q
    |||||||||||| |||||||||||| |||||||||||||||||| |||||||||| |||||| |    |||||||||||  |||||||||||  ||||||    
T  34910378 tacgacaccgactcttgtaattacactgaattatgtgattttttcaaattattagttgtgtcgg----cgtgtcgtgtctggtgtccgtatccgtgcttc 34910283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 149 - 206
Target Start/End: Complemental strand, 14832159 - 14832102
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgt 206  Q
    ||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  14832159 acgacactgacacttgtaattacattgagttatgtgattttttcaaattattagctgt 14832102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 21256985 - 21257046
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtca 210  Q
    |||| ||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||    
T  21256985 acgataccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtca 21257046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 4987294 - 4987350
Alignment:
Q  153 caccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  4987294 caccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 4987350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 34185122 - 34185182
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| |||||    
T  34185122 acgacaccgacacttgtaattacactgaattgtgtgattttttgaaattattagccgtgtc 34185182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 21479177 - 21479118
Alignment:
Q  150 cgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||| ||||||||| |||||| ||||||||||| |||||||||||||||||    
T  21479177 cgacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtc 21479118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 40993325 - 40993423
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtga-ttttttaaaattattagctgtgtc--agtttccgtgtcgtgtccgtgtccgt 235  Q
    ||||||||| |||||||||||| | |||||||| |||||||||||| |||||| ||||||||||| |||||   || |||||||||||||||| |||||    
T  40993325 gtgtcgtgtccgacaccgacacatataattacactgaattatgtgattttttttaaattattagcggtgtcgaggtgtccgtgtcgtgtccgtatccgt 40993423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 20503534 - 20503437
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc--agtttccgtgtcgtgtccgtgtccgt 235  Q
    ||||||||| | ||||||||||||||||||||| |||||||||| ||||||| |||||||| | ||||||   || || ||||||||||||| |||||    
T  20503534 gtgtcgtgtccaacaccgacacttgtaattacactgaattatgtcattttttcaaattatttgttgtgtcggcgtgtcagtgtcgtgtccgtatccgt 20503437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 16000010 - 16000075
Alignment:
Q  144 cgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| ||||||||||||||||| ||||| |||||||||| ||||||| |||||||||| ||||||    
T  16000010 cgtgtccgacaccgacacttgtagttacactgaattatgttatttttttaaattattagttgtgtc 16000075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 26492195 - 26492264
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||| ||||||||| ||||||||||||| |||||| | ||||||||| |||||||||||| ||||    
T  26492195 gtgtcgtgtccgacaccgatacttgtaattacactgaattgtatgattttttcaaattattagctctgtc 26492264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 149 - 250
Target Start/End: Complemental strand, 28812575 - 28812477
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtccg-tgtccgtatctatgcttca 247  Q
    ||||||||||||||||||| |||| ||||||||||||||| || |||||||||| |||||| |    ||||||||||||| |||| |||||  |||||||    
T  28812575 acgacaccgacacttgtaactacactgaattatgtgatttcttcaaattattagttgtgtcgg----cgtgtcgtgtccgttgtctgtatccgtgcttca 28812480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 152 - 209
Target Start/End: Complemental strand, 55213020 - 55212963
Alignment:
Q  152 acaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||||| || | |||||||||||||||||||||||||| |||||||    
T  55213020 acaccgacacttgtaattgcactaaattatgtgattttttaaaattattaactgtgtc 55212963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 14216952 - 14216892
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||| |||||||||||||||| |||||||| |||| ||||||||||||||| ||||||    
T  14216952 acgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtc 14216892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 14223081 - 14223021
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||| |||||||||||||||| |||||||| |||| ||||||||||||||| ||||||    
T  14223081 acgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtc 14223021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 14829749 - 14829690
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||||||||||  ||||||||||||| |||| |||||||||||||||||    
T  14829749 acgacaccgacacttgtaattaccatgaattatgtgat-ttttcaaattattagctgtgtc 14829690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 15796293 - 15796353
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||| ||||||||||| |||||||| ||||||||| ||||||||| |||||||    
T  15796293 acgacaccgacaattgtaattacactgaattatatgattttttcaaattattaactgtgtc 15796353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 39756296 - 39756244
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    |||||||||||||||||||||| ||| |||||||||||||||| |||||||||    
T  39756296 acgacaccgacacttgtaattatattaaattatgtgatttttttaaattatta 39756244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 209
Target Start/End: Original strand, 8587021 - 8587080
Alignment:
Q  150 cgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||||||||||||| | |||||||||||||||| |||||| ||| ||||||    
T  8587021 cgacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtc 8587080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 228
Target Start/End: Complemental strand, 14028067 - 14027988
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtccg 228  Q
    ||||||||||||| | |||||||| || ||| ||||||||| |||||  |||||||||||| || |||||||||||||||    
T  14028067 acgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggtgtccgtgtcgtgtccg 14027988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 35223009 - 35222938
Alignment:
Q  138 acgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||| ||| |||||||||||| | ||||||||||||||||||||||||| ||||| | |||| ||||||    
T  35223009 acgtgtcatgtccgacaccgacacatataattacattgaattatgtgattttctaaaaatgttagttgtgtc 35222938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 10268487 - 10268545
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| |||||||||||||||| | |||||||||||||||| ||||||||| |||||||    
T  10268487 gacactgacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtc 10268545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 25775574 - 25775516
Alignment:
Q  144 cgtgtacgacaccgacacttgtaattacattgaattatgtgatt-ttttaaaattatta 201  Q
    ||||| ||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  25775574 cgtgtccgacaccgacacttgtaattacactgaattatgtgattattttcaaattatta 25775516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 25948886 - 25948940
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagc 203  Q
    |||||||| |||||| |||||||| |||||||||||||||||| |||||||||||    
T  25948886 acgacaccaacacttataattacactgaattatgtgattttttcaaattattagc 25948940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 8383322 - 8383257
Alignment:
Q  144 cgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| |||||||||||||| |||||||| |||||||| ||||||| | ||||||||||| |||||    
T  8383322 cgtgtccgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtc 8383257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 8593196 - 8593135
Alignment:
Q  150 cgacaccgacacttgtaattacattgaattatgtgatttttt-aaaattattagctgtgtca 210  Q
    ||||||||||||||||||||| | ||||||||||||||||||  |||||| |||||||||||    
T  8593196 cgacaccgacacttgtaattatactgaattatgtgattttttccaaattagtagctgtgtca 8593135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 35994744 - 35994796
Alignment:
Q  156 cgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||||||| |||||||||||| ||||| |||||||||||||||||    
T  35994744 cgacacttgtaattacactgaattatgtga-tttttcaaattattagctgtgtc 35994796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 38731277 - 38731224
Alignment:
Q  150 cgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagc 203  Q
    |||||||||||| | ||| |||| ||||||||||||||||||||||||||||||    
T  38731277 cgacaccgacacatataactacactgaattatgtgattttttaaaattattagc 38731224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 750617 - 750677
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||||||||||| ||  |||||||||||| |||| |||||||||| ||||||    
T  750617 acgacaccgacacttgtaattgcagcgaattatgtgatattttcaaattattagttgtgtc 750677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 3164024 - 3164084
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||| | ||||||||  ||||| |||||||||||||||||| |||||||||||||||||    
T  3164024 acgacatcaacacttgttcttacactgaattatgtgattttttcaaattattagctgtgtc 3164084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 8930828 - 8930880
Alignment:
Q  148 tacgacaccgacacttgtaattacattgaattatgtgattttttaaaattatt 200  Q
    ||||||| |||||| | ||||||||| ||||||||||||||||||||||||||    
T  8930828 tacgacatcgacacatataattacatcgaattatgtgattttttaaaattatt 8930880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 135 - 191
Target Start/End: Original strand, 14338468 - 14338524
Alignment:
Q  135 gatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgatttttt 191  Q
    ||||||||||||||  |||||||||| |||| ||||||||||||||||| |||||||    
T  14338468 gatacgtgtcgtgtctgacaccgacatttgtgattacattgaattatgtcatttttt 14338524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 11610573 - 11610522
Alignment:
Q  157 gacacttgtaattacattgaattatgtgattttttaaaattattagctgtgt 208  Q
    ||||||||||| |||| |||||||||||||||||| ||||||||||| ||||    
T  11610573 gacacttgtaactacactgaattatgtgatttttttaaattattagcggtgt 11610522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 14979224 - 14979181
Alignment:
Q  166 aattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||| |||||||||||||||||| |||||||||||||||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagctgtgtc 14979181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 7171578 - 7171520
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttt 190  Q
    ||||| ||||||||||| ||||||| |||||||||||||||  ||||||| ||||||||    
T  7171578 tcggacacgtgtcgtgtccgacaccaacacttgtaattacaccgaattatatgattttt 7171520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 209
Target Start/End: Original strand, 10335275 - 10335345
Alignment:
Q  139 cgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||  ||||||||||||||||| ||||| | || ||||||| ||||| |||||||||| ||||||    
T  10335275 cgtgtcgtgcccgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagttgtgtc 10335345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 238
Target Start/End: Complemental strand, 14747622 - 14747529
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgatt-ttttaaaattattagctgtgtc--agtttccgtgtcgtgtcc-gtgtccgtatc 238  Q
    ||||||| ||| |||||||||||| | |||||||||||| |||| |||||||||||||||||   || || ||||||||||| |||||||||||    
T  14747622 acgacacggacccttgtaattacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtcagtgtcgtgtccggtgtccgtatc 14747529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 250
Target Start/End: Original strand, 32400702 - 32400809
Alignment:
Q  144 cgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgt--cagtttccgtgtc--gtgtccgtgtccgtatct 239  Q
    ||||| |||||| ||||||||||||||||   |||||||| || |||| ||||||||||||||||  | || || |||||  |||| ||||||||||||     
T  32400702 cgtgtccgacacggacacttgtaattaca---aattatgtaatcttttcaaattattagctgtgtcgccgtgtcagtgtccggtgttcgtgtccgtatcc 32400798  T
Q  240 atgcttcatag 250  Q
    |||||||||||    
T  32400799 atgcttcatag 32400809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 41961649 - 41961707
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtg 207  Q
    ||||||||||||||||||||||||  |||| ||||||| |||| |||||||||| ||||    
T  41961649 acgacaccgacacttgtaattacaccgaataatgtgatattttcaaattattagttgtg 41961707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 138 - 191
Target Start/End: Complemental strand, 3865745 - 3865692
Alignment:
Q  138 acgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgatttttt 191  Q
    |||||||||||  |||||||||||||||||||| | |||||||||||| |||||    
T  3865745 acgtgtcgtgtcagacaccgacacttgtaattatactgaattatgtgagttttt 3865692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 8789540 - 8789609
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||| |||||||||||| | ||||||||  ||||||||||||||| | ||||||| ||| |||||    
T  8789540 gtgtcgtgtccgacaccgacacatataattacacggaattatgtgattttctcaaattataagccgtgtc 8789609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 9624685 - 9624640
Alignment:
Q  165 taattacattgaattatgtgattttttaaaattattagctgtgtca 210  Q
    ||||||||||||||||||||||||| | ||||||||||| ||||||    
T  9624685 taattacattgaattatgtgattttctcaaattattagcagtgtca 9624640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 13414533 - 13414452
Alignment:
Q  145 gtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtgtc 226  Q
    |||| |||||||||||| | ||||||||||||||||| ||||||| |||||   || | |||||| || |||||||||||||    
T  13414533 gtgtccgacaccgacacatataattacattgaattatttgattttctaaaacatttggttgtgtcggtgtccgtgtcgtgtc 13414452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 18427025 - 18426956
Alignment:
Q  133 cggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattag 202  Q
    |||| ||||||||| | |||||||||||  | ||||||||  ||||||||||||||||| ||||||||||    
T  18427025 cggacacgtgtcgtatccgacaccgacatatataattacaccgaattatgtgattttttgaaattattag 18426956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 4990966 - 4991026
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| |||||||||||||||||| |||||||||| ||||| | ||| ||||||| |||||    
T  4990966 acgacgccgacacttgtaattacactgaattatgtaattttctcaaactattagcggtgtc 4991026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 223
Target Start/End: Original strand, 7614404 - 7614488
Alignment:
Q  139 cgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgt 223  Q
    |||| ||||| |||||||||||  | |||||| | |||||||||||||||| | ||||||||| ||||||| || || |||||||    
T  7614404 cgtgccgtgttcgacaccgacatatataattatactgaattatgtgattttcttaaattattaactgtgtcggtgtctgtgtcgt 7614488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 224
Target Start/End: Complemental strand, 11252052 - 11251963
Alignment:
Q  133 cggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtcgtg 224  Q
    |||| |||||| ||||  ||||||||||| |  ||||||| |||||||||||||||| | |||||||||||  ||||||| ||| |||||||    
T  11252052 cggacacgtgttgtgtctgacaccgacacat--aattacactgaattatgtgattttctcaaattattagcaatgtcagtgtccatgtcgtg 11251963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 40052367 - 40052304
Alignment:
Q  174 tgaattatgtgattttttaaaattattagctgtgtc--agtttccgtgtcgtgtccgtgtccgt 235  Q
    |||||||||||||||||| |||||||||||||||||   || || ||||||||||||| |||||    
T  40052367 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcgtgtccgtatccgt 40052304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 34307786 - 34307841
Alignment:
Q  156 cgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcag 211  Q
    |||||||| |||||||| |||| ||||||||||| | ||||||||||| |||||||    
T  34307786 cgacacttataattacactgaaatatgtgattttctcaaattattagcggtgtcag 34307841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 17005621 - 17005671
Alignment:
Q  152 acaccgacacttgtaattacattgaattatgtgattttttaaaattattag 202  Q
    |||||||||||| |||||||| |||||||| ||||||| | ||||||||||    
T  17005621 acaccgacacttataattacactgaattatatgattttatcaaattattag 17005671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 15314875 - 15314940
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagttt 214  Q
    |||||||| |||| | |||||||| | |||||||||||||||| |||||| ||  |||||||||||    
T  15314875 acgacaccaacacatataattacactaaattatgtgattttttcaaattaataattgtgtcagttt 15314940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 33359820 - 33359759
Alignment:
Q  150 cgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcag 211  Q
    |||||| |||||||||| ||||| | || |||||||  |||| |||||||||||||||||||    
T  33359820 cgacactgacacttgtatttacactaaaatatgtgaccttttcaaattattagctgtgtcag 33359759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 45451622 - 45451541
Alignment:
Q  140 gtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtc 221  Q
    ||||||||| |||||||||||| | | |||| | |||| ||||||||||| | ||||||||||| ||||  || ||||||||    
T  45451622 gtgtcgtgtccgacaccgacacatattattatactgaagtatgtgattttctcaaattattagcagtgttcgtgtccgtgtc 45451541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 39002076 - 39002044
Alignment:
Q  165 taattacattgaattatgtgattttttaaaatt 197  Q
    ||||||||||||||||||||||||||| |||||    
T  39002076 taattacattgaattatgtgattttttcaaatt 39002044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 149 - 252
Target Start/End: Complemental strand, 20232 - 20120
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctg--------tgtcagtttccgtgtcgtgtcc-gtgtccgtatct 239  Q
    ||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||        ||||| | |||||||||||||| ||||||||||||    
T  20232 acgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatct 20133  T
Q  240 atgcttcataggt 252  Q
     ||||||||||||    
T  20132 gtgcttcataggt 20120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 444 - 521
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| ||| ||||||| ||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| |||||    
T  444 tcggacacgcgtcgtgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagcagtgtc 521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 8875 - 8798
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| ||||||||||| ||||||||||||||||||||||| | ||| || ||||||||| |||||||||||||||||    
T  8875 tcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaataatatgattttttcaaattattagctgtgtc 8798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 70355 - 70278
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| ||||||||||| |||||||||||||| |||||||| |||||||||| ||||||| ||||||||| |||||||    
T  70355 tcggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgttattttttcaaattattaactgtgtc 70278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 51862 - 51785
Alignment:
Q  158 acacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgtc-gtgtccgtgtccgtatc 238  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||| |    |||||| |||||||||||||||||    
T  51862 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcgg----cgtgtcagtgtccgtgtccgtatc 51785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 17750 - 17810
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcag 211  Q
    |||||||||||||||||||||| | |||||||||||||||| |||||||||| ||||||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcag 17810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 14604 - 14530
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||| ||||||||||| |||||||   ||||||||||||| |||||||||||||||||| |||||||||| ||||||    
T  14604 tcggacacgtgtcgtgtccgacacc---acttgtaattacactgaattatgtgattttttcaaattattagttgtgtc 14530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 46741 - 46682
Alignment:
Q  150 cgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||| ||||||||||| |||||||||||||||||| ||||||||| |||||||    
T  46741 cgacaccgacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtc 46682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 209
Target Start/End: Original strand, 7017 - 7091
Alignment:
Q  135 gatacgtgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||| |||| ||||||| ||||||||||||| | | |||||||| ||||||| |||||||||||||||||    
T  7017 gatacgtgttgtgtccgacacctacacttgtaattatactaaattatgtaattttttcaaattattagctgtgtc 7091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 4871 - 4943
Alignment:
Q  140 gtgtcgtgtac--gacaccgacacttgtaattacattgaattatgtga-ttttttaaaattattagctgtgtc 209  Q
    |||||||||||  |||||| ||||||||||||||| |||||||||||| |||||| |||||||||||||||||    
T  4871 gtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgattttttttaaattattagctgtgtc 4943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 250
Target Start/End: Complemental strand, 23480 - 23371
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagct--------gtgtcagtttccgtgtcgtgtccgtgtccgtatcta 240  Q
    ||||||||||||||| |||||||| ||||||||||||||||||  | |||||| ||        |||||||| || ||||||||||||||||||||||      
T  23480 acgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgtgtccgtatccg 23381  T
Q  241 tgcttcatag 250  Q
    ||||||||||    
T  23380 tgcttcatag 23371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 191
Target Start/End: Complemental strand, 23571 - 23529
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgatttttt 191  Q
    ||||||| ||||||| |||||||| ||||||||||||||||||    
T  23571 acgacactgacacttataattacactgaattatgtgatttttt 23529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 3848 - 3900
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    ||||||| |||||||||||||||| |||||||||||||||||| |||||||||    
T  3848 acgacactgacacttgtaattacactgaattatgtgatttttttaaattatta 3900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 23830 - 23766
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgatt-ttttaaaattattagctgtgtcagt 212  Q
    |||||||||||||||||||||||| |||||||||||||| |||| ||||||||| ||||| ||||    
T  23830 acgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattaactgtgacagt 23766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 130538 - 130482
Alignment:
Q  153 caccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||||||| |||||||||||||||||| ||| ||||| |||||||    
T  130538 caccgacacttgtaattacactgaattatgtgattttttcaaactattaactgtgtc 130482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 123686 - 123626
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtga---ttttttaaaattattagctgtgt 208  Q
    |||||||||||||||||||||| ||||||||||||   |||||| ||||||||||||||||    
T  123686 gacaccgacacttgtaattacactgaattatgtgattctttttttaaattattagctgtgt 123626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 148 - 197
Target Start/End: Complemental strand, 83221 - 83172
Alignment:
Q  148 tacgacaccgacacttgtaattacattgaattatgtgattttttaaaatt 197  Q
    ||||||||||||| ||||||||||| |||||||||| ||||||| |||||    
T  83221 tacgacaccgacatttgtaattacactgaattatgtcatttttttaaatt 83172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 92859 - 92807
Alignment:
Q  157 gacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||||||| |||||||||| ||||| | ||||||||||| |||||    
T  92859 gacacttgtaattacactgaattatgtaattttctcaaattattagcggtgtc 92807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 183
Target Start/End: Original strand, 45518 - 45563
Alignment:
Q  138 acgtgtcgtgtacgacaccgacacttgtaattacattgaattatgt 183  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||    
T  45518 acgtgtcgtgtccgacaccgacacttgtaattacactgaattatgt 45563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 6373 - 6301
Alignment:
Q  148 tacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcagtttccgtgt 220  Q
    |||||||||||||| | ||||||||||||||||||  ||||| | ||||||||||| ||||| || |||||||    
T  6373 tacgacaccgacacatataattacattgaattatgcaattttgtcaaattattagcagtgtccgtgtccgtgt 6301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 209
Target Start/End: Complemental strand, 8077 - 8010
Alignment:
Q  141 tgtcgtgtacgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||| |||||||||||||| |||||||| || ||||| ||||||||| |||||||||| ||||||    
T  8077 tgtcgtgtccgacaccgacactt-taattacactgtattatatgattttttcaaattattagttgtgtc 8010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 149 - 250
Target Start/End: Complemental strand, 71785 - 71679
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgatt--ttttaaaattattagctgtgtc--agtttccgtgtcgtgtccg-tgtccgtatctatgc 243  Q
    ||||||| |||||| ||||||||| |||||| |||||||  |||| |||||||||||||||||   || || |||||||||||| ||||||||||  |||    
T  71785 acgacactgacactagtaattacactgaattgtgtgattttttttcaaattattagctgtgtcggcgtgtcagtgtcgtgtccgatgtccgtatccgtgc 71686  T
Q  244 ttcatag 250  Q
    |||||||    
T  71685 ttcatag 71679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 241654 - 241594
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||||  |||||||| | |||||||||||||||  |||||||||||||||||    
T  241654 acgacaccgacactcataattacactaaattatgtgatttttccaaattattagctgtgtc 241594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 13459 - 13400
Alignment:
Q  150 cgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||| ||||||||| || |||||||||||||||| | |||||||||| ||||||    
T  13459 cgacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtc 13400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 209
Target Start/End: Original strand, 21868 - 21927
Alignment:
Q  150 cgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||| ||||||||| || |||||||||||||||| | |||||||||| ||||||    
T  21868 cgacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtc 21927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 209
Target Start/End: Original strand, 33375 - 33422
Alignment:
Q  162 ttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||| |||||||||| ||||||| |||||||||||||||||    
T  33375 ttgtaattacactgaattatgttattttttcaaattattagctgtgtc 33422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 178819 - 178878
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatg-tgattttttaaaattattagctgtgtc 209  Q
    ||||| |||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||    
T  178819 gacactgacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtc 178878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 250
Target Start/End: Original strand, 44524 - 44628
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtcag--tttccgtgtcgtgtc-cgtgtccgtatctatgctt 245  Q
    |||| |||||||| | |||||||| |||||||||||||||| | ||||| ||||| |||||||  | ||| |||||||||  ||||| ||||| ||||||    
T  44524 acgataccgacacatataattacactgaattatgtgattttctcaaatttttagcggtgtcagcttgtccctgtcgtgtctggtgtctgtatccatgctt 44623  T
Q  246 catag 250  Q
    |||||    
T  44624 catag 44628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 63831 - 63774
Alignment:
Q  151 gacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgt 208  Q
    ||||||||||||||||||| || |||||||||| ||||| | ||||||||||| ||||    
T  63831 gacaccgacacttgtaattgcactgaattatgtaattttctcaaattattagcggtgt 63774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 5018 - 5058
Alignment:
Q  132 tcggatacgtgtcgtgtacgacaccgacacttgtaattaca 172  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  5018 tcggacacgtgtcgtgtccgacaccgacacttgtaattaca 5058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 8634 - 8694
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||||| ||||||||| |  |||||||||||| |||| |||||||||| ||||||    
T  8634 acgacaccgacatttgtaattataccgaattatgtgatattttcaaattattagttgtgtc 8694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 99953 - 99901
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    |||||||| |||| | ||||||||||||||||||| ||||| |||||||||||    
T  99953 acgacaccaacacatataattacattgaattatgttattttctaaaattatta 99901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 135311 - 135371
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    ||||||||||||| | ||||||||  ||||||||||||||| | ||||||||||| |||||    
T  135311 acgacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtc 135371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 53236 - 53189
Alignment:
Q  153 caccgacacttgtaattacattgaattatgtgattttttaaaattatt 200  Q
    ||||||||||| |||||||| |||||||||||||||| | ||||||||    
T  53236 caccgacacttataattacactgaattatgtgattttctcaaattatt 53189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 263371 - 263430
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgt 208  Q
    ||||||| ||||||| |||||||| ||||||||||| |||| | ||||||||||| ||||    
T  263371 acgacactgacacttataattacactgaattatgtggttttctcaaattattagcagtgt 263430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 209
Target Start/End: Complemental strand, 24071 - 24025
Alignment:
Q  163 tgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||||| | ||||||| ||||||| ||||||||||||||||||    
T  24071 tgtaattacactaaattatgagatttttgaaaattattagctgtgtc 24025  T

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Target: scaffold0236 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 25767 - 25828
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtca 210  Q
    ||||||||||||||| |||||||| | |||||||||||||| |  |||||||| | ||||||    
T  25767 acgacaccgacacttataattacactaaattatgtgattttctctaattattaaccgtgtca 25828  T

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Target: scaffold0110 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 28907 - 28858
Alignment:
Q  152 acaccgacacttgtaattacattgaattatgtgattttttaaaattatta 201  Q
    |||||||||| | |||||||||||||||||| |||||| | |||||||||    
T  28907 acaccgacacatataattacattgaattatgcgattttcttaaattatta 28858  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 9746 - 9799
Alignment:
Q  149 acgacaccgacacttgtaattacattgaattatgtgattttttaaaattattag 202  Q
    ||||||||||||| | |||||||| ||||||| |||||||| | ||||||||||    
T  9746 acgacaccgacacatataattacactgaattaagtgattttctcaaattattag 9799  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 225274 - 225327
Alignment:
Q  156 cgacacttgtaattacattgaattatgtgattttttaaaattattagctgtgtc 209  Q
    |||||||| ||||||||||| ||||||| ||||| | ||||||||| |||||||    
T  225274 cgacacttataattacattgtattatgtcattttctcaaattattatctgtgtc 225327  T

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Target: scaffold0246 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 190
Target Start/End: Complemental strand, 19626 - 19594
Alignment:
Q  158 acacttgtaattacattgaattatgtgattttt 190  Q
    ||||||||||||||| |||||||||||||||||    
T  19626 acacttgtaattacactgaattatgtgattttt 19594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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