View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2087_low_21 (Length: 253)
Name: NF2087_low_21
Description: NF2087
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2087_low_21 |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 16153963 - 16154196
Alignment:
| Q |
1 |
ccaataaggactagaaaaatctagatccaaatctttaacctcttgttgaatagcgaaatcaacacatctttcgacaatctcagaactagttacatgacca |
100 |
Q |
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| T |
16153963 |
ccaatacggactagaaaaatctagatccaaatctataaccccttgttgaatagcgaaatcaacacatctttcgacaatctcagaactagttacatgacca |
16154062 |
T |
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| Q |
101 |
ggatctgctaatgtcaaagataatttttcaacgatggaattttcttcgtaattttcaatacataatgtaatgaagtgaagaaaatcccatctttggaatt |
200 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16154063 |
ggatctgctaatgtcaaagataatttttcaacaatggaattttcttggtaattttcaatacataatgtaatgaagtgaagaaaatcccatctttggaatt |
16154162 |
T |
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| Q |
201 |
cagatccaacaaaaaagtgttcattgaactcaat |
234 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
16154163 |
cagatccaacaaaaaagtgttcattgaactcaat |
16154196 |
T |
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