View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2087_low_4 (Length: 545)
Name: NF2087_low_4
Description: NF2087
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2087_low_4 |
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Alignment Details
Target: chr8 (Bit Score: 493; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 493; E-Value: 0
Query Start/End: Original strand, 16 - 528
Target Start/End: Complemental strand, 32146277 - 32145765
Alignment:
| Q |
16 |
attggatcatatacatatatatggattctagaaagacgaaactactgaagagctggcaaccaagccagagaggagagcaactaaaagtgcattactgtaa |
115 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32146277 |
attggatcatatacatatatatggattctagaaagacgaaactactgaagagctggcaaccaagccagagaggagagcaactaaaagtgcattactgtaa |
32146178 |
T |
|
| Q |
116 |
gtggtaggttcagcctgcattgagttcttcctaaaatcattatatgtctcattgaagaaggggccacccactatagctccaaatgccacattaggatttg |
215 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32146177 |
gtggtaggttcagcctgcattgagttgttcctaaaatcattatatgtctcattgaagaaggggccacccactatagctccaaatgccacattaggatttg |
32146078 |
T |
|
| Q |
216 |
gttgaggtgagtcataccacttgaatccatccttgcacccagttttagcattaactggaattgaagatcctctatgatgtatatatttagggtagttact |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32146077 |
gttgaggtgagtcataccacttgaatccatccttgcacccagttttagcattaactggaattgaagatcctctatgatgtatatatttagggtagttact |
32145978 |
T |
|
| Q |
316 |
tccatatcccacaagaaaactcatcttcattggattttctcccaacacatactctacctgaaattgttttaatttgccatttttcaggagtgacacaata |
415 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
32145977 |
tccatatcccacaagaaaactcatcttcattggattttctcccaacacatactctacctgaaatagttttaatttgccatttttcaggagtgacacaata |
32145878 |
T |
|
| Q |
416 |
acataatattaggagcaattcgagcataaagcctacttgtaagtaatctttaaaccatgccgagtttatagaatcgtgtaagcataaagccaagttgcta |
515 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32145877 |
acataatattaggagcaattcgagcataaagcctacttgctagtaatctttaaaacatgccgagtttatagaatcgtgtaagcataaagccaagttgcta |
32145778 |
T |
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| Q |
516 |
gtatcgtcaaacc |
528 |
Q |
| |
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||||||||||||| |
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| T |
32145777 |
gtatcgtcaaacc |
32145765 |
T |
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