View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20880_high_8 (Length: 255)
Name: NF20880_high_8
Description: NF20880
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20880_high_8 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 9 - 255
Target Start/End: Original strand, 29940618 - 29940864
Alignment:
| Q |
9 |
gaagaaaataatttggtcaggaaaaggatacattgtgtgaacataatgcaaaaattgatatgcagtagtactagttgttattaacacggctagaacaact |
108 |
Q |
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| T |
29940618 |
gaagaaaataatttggtcaggaaaaggatacattgtgtgaacataaaacaaaaattgatatgcagtagtactagttgttattaacacggctagaacaact |
29940717 |
T |
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| Q |
109 |
taaattctatgtatatatagaaggttttagtccaaagtatattaatgttaaactgaatatgagagcatatatagataggaacataaaaatgtcagtacta |
208 |
Q |
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| T |
29940718 |
taaattctatgtatatatagaaggttttagtccaaagtatattaatgtcaaactgaatatgagagcatatatagataggaacataaaaatgtcagtacta |
29940817 |
T |
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| Q |
209 |
gttagtagtgcagcacaagaaaagcaaaataaaataccttaagaaca |
255 |
Q |
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| T |
29940818 |
gttagtagtgcagcacaagaaaagcaaaataaaataccttaagaaca |
29940864 |
T |
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