View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20882_low_21 (Length: 250)

Name: NF20882_low_21
Description: NF20882
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20882_low_21
NF20882_low_21
[»] chr8 (8 HSPs)
chr8 (82-237)||(36402918-36403073)
chr8 (82-201)||(26132062-26132181)
chr8 (86-213)||(10331470-10331596)
chr8 (87-220)||(10333542-10333674)
chr8 (82-132)||(5434032-5434082)
chr8 (80-192)||(44376641-44376752)
chr8 (82-132)||(36402201-36402251)
chr8 (82-131)||(26847097-26847146)
[»] chr1 (6 HSPs)
chr1 (82-237)||(13416228-13416383)
chr1 (80-237)||(5490509-5490665)
chr1 (79-214)||(31109236-31109371)
chr1 (82-133)||(31116681-31116732)
chr1 (85-132)||(5491334-5491381)
chr1 (82-129)||(26240872-26240919)
[»] chr7 (12 HSPs)
chr7 (82-237)||(24874471-24874626)
chr7 (79-221)||(767133-767275)
chr7 (82-221)||(767875-768014)
chr7 (82-132)||(41965775-41965825)
chr7 (82-192)||(24873751-24873861)
chr7 (80-223)||(27918516-27918660)
chr7 (151-221)||(27917764-27917834)
chr7 (84-162)||(21975693-21975771)
chr7 (82-129)||(18569020-18569067)
chr7 (82-129)||(18652891-18652938)
chr7 (82-132)||(41965112-41965162)
chr7 (82-130)||(42817798-42817846)
[»] chr4 (5 HSPs)
chr4 (82-237)||(21281054-21281209)
chr4 (82-232)||(45140454-45140604)
chr4 (82-213)||(45141060-45141191)
chr4 (84-132)||(53778413-53778461)
chr4 (82-126)||(42792775-42792819)
[»] scaffold0006 (2 HSPs)
scaffold0006 (105-237)||(285903-286035)
scaffold0006 (87-132)||(285183-285228)
[»] chr6 (5 HSPs)
chr6 (82-223)||(10965230-10965371)
chr6 (82-209)||(2138477-2138603)
chr6 (82-223)||(709322-709462)
chr6 (82-133)||(10966377-10966428)
chr6 (82-192)||(8113373-8113482)
[»] chr3 (12 HSPs)
chr3 (82-232)||(43453439-43453589)
chr3 (82-221)||(14746811-14746949)
chr3 (81-189)||(43454103-43454210)
chr3 (82-223)||(42020793-42020934)
chr3 (82-221)||(14746041-14746180)
chr3 (141-214)||(35982554-35982627)
chr3 (82-130)||(15287567-15287615)
chr3 (82-133)||(16076210-16076261)
chr3 (82-132)||(41419617-41419667)
chr3 (172-232)||(54308966-54309026)
chr3 (1-33)||(54850580-54850612)
chr3 (144-192)||(41418822-41418869)
[»] chr2 (5 HSPs)
chr2 (82-189)||(7754012-7754119)
chr2 (82-129)||(7754968-7755015)
chr2 (82-124)||(127741-127783)
chr2 (82-132)||(4716871-4716921)
chr2 (82-130)||(44296860-44296908)
[»] chr5 (5 HSPs)
chr5 (82-131)||(23253485-23253534)
chr5 (82-130)||(39466885-39466933)
chr5 (81-129)||(24565572-24565620)
chr5 (81-129)||(24606608-24606656)
chr5 (82-130)||(39937906-39937954)


Alignment Details
Target: chr8 (Bit Score: 111; Significance: 4e-56; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 82 - 237
Target Start/End: Complemental strand, 36403073 - 36402918
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 181  Q
    |||||||||||| |||| ||||||||||||||| ||||||||||||||||||       | |||||||||||||||||||||||||||||||||||||||    
T  36403073 ggtggattctagagtgagggtccaattaggtccctcaccggtggaccacgagaaaaacacagttagataaaatagatggttaagatttattcaaattaaa 36402974  T
Q  182 agtgagaacatatacaattactcacattcaatcctatcctaacattgtttccacct 237  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  36402973 agtgagaacatatacaattactcatattcaatcctatcctaacatggtttccacct 36402918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 82 - 201
Target Start/End: Complemental strand, 26132181 - 26132062
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 181  Q
    |||||||| || ||||| ||||||||||||||| |||| |||||||||||||       |||||||||||||||||||||||||||||||| ||||||||    
T  26132181 ggtggattttaaggtgagggtccaattaggtccctcactggtggaccacgagaaaaacaccgttagataaaatagatggttaagatttattgaaattaaa 26132082  T
Q  182 agtgagaacatatacaatta 201  Q
    ||||||||||||||||||||    
T  26132081 agtgagaacatatacaatta 26132062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 213
Target Start/End: Original strand, 10331470 - 10331596
Alignment:
Q  86 gattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaaagtg 185  Q
    |||| |||||||| ||||||||||||||  ||| ||||||||||||||       | ||||||| |||||||||||| |||||||||| |||||||| |     
T  10331470 gattatagggtgagggtccaattaggtctctcatcggtggaccacgagaaaaaaactgttagatgaaatagatggttcagatttattc-aattaaaaata 10331568  T
Q  186 agaacatatacaattactcacattcaat 213  Q
    ||||||| |||||||||| |||||||||    
T  10331569 agaacatgtacaattactgacattcaat 10331596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 220
Target Start/End: Complemental strand, 10333674 - 10333542
Alignment:
Q  87 attctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaaagtga 186  Q
    |||||| ||||| ||||||||||||||| ||||| ||||||||||||       | | || ||||||||||||||| ||||||||| ||||||||||||     
T  10333674 attctaaggtgagggtccaattaggtccctcaccagtggaccacgagaaaaca-cagctaaataaaatagatggtttagatttatttaaattaaaagtgg 10333576  T
Q  187 gaacatatacaattactcacattcaatcctatcc 220  Q
    ||| ||||||||  ||| ||||||||| ||||||    
T  10333575 gaatatatacaagcacttacattcaattctatcc 10333542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 5434032 - 5434082
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacga 132  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  5434032 ggtggattctagggtgagggtccaattaagtccttcaccggtggaccacga 5434082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 192
Target Start/End: Original strand, 44376641 - 44376752
Alignment:
Q  80 acggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaatta 179  Q
    |||||||||||||||| || |||||||||| |||| ||| |||||||||||||        ||  || || |||||||||||| ||||||||||||||||    
T  44376641 acggtggattctagggcgagggtccaattacgtccctcatcggtggaccacgaaaaaaataccaataaattaaatagatggttcagatttattcaaatta 44376740  T
Q  180 aaagtgagaacat 192  Q
    |||| ||||||||    
T  44376741 aaag-gagaacat 44376752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 36402201 - 36402251
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacga 132  Q
    |||||||| |||||||| |||||||||||||||  ||||||||||||||||    
T  36402201 ggtggattttagggtgagggtccaattaggtcccacaccggtggaccacga 36402251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 131
Target Start/End: Original strand, 26847097 - 26847146
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacg 131  Q
    ||||||||||||||||| |||||||||| |||| ||||||||| ||||||    
T  26847097 ggtggattctagggtgagggtccaattaagtccctcaccggtgaaccacg 26847146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 4e-56; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 82 - 237
Target Start/End: Complemental strand, 13416383 - 13416228
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 181  Q
    ||||||||||||| ||| ||||||||||||||| || |||||||||||||||       ||||||||||||||||||||||||||| |||||||||||||    
T  13416383 ggtggattctaggatgagggtccaattaggtccctcgccggtggaccacgagaaaaacaccgttagataaaatagatggttaagatatattcaaattaaa 13416284  T
Q  182 agtgagaacatatacaattactcacattcaatcctatcctaacattgtttccacct 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13416283 agtgagaacatatacaattactcacattcaatcctatcctaacatggtttccacct 13416228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 5490509 - 5490665
Alignment:
Q  80 acggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaatta 179  Q
    ||||||||||||||| ||| ||| ||||||||||  ||| ||||||||||||||       |||||| ||||||||||||||||||||||||||||||||    
T  5490509 acggtggattctagg-tgagggttcaattaggtctctcatcggtggaccacgagaaaaacaccgttaaataaaatagatggttaagatttattcaaatta 5490607  T
Q  180 aaagtgagaacatatacaattactcacattcaatcctatcctaacattgtttccacct 237  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5490608 aaagtaagaacatatacaattactcacattcaatcctatcctaacatggtttccacct 5490665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 31109236 - 31109371
Alignment:
Q  79 tacggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaatt 178  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||| |||||       ||  ||||| ||| |  ||||| ||||||||| |||||    
T  31109236 tacggtggattctagggtgagggtccaattaggtccctcaccggtggactacgagaaaaataccaatagattaaacaagtggttcagatttatttaaatt 31109335  T
Q  179 aaaagtgagaacatatacaattactcacattcaatc 214  Q
    ||||||| |||||| || |  | |||||||||||||    
T  31109336 aaaagtgggaacatgtagagctgctcacattcaatc 31109371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 133
Target Start/End: Complemental strand, 31116732 - 31116681
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgag 133  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||| |||||    
T  31116732 ggtggattctagggtgagggtccaattaggtccctcaccggtggactacgag 31116681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 132
Target Start/End: Complemental strand, 5491381 - 5491334
Alignment:
Q  85 ggattctagggtgaaggtccaattaggtccttcaccggtggaccacga 132  Q
    |||||||||| ||| ||||||||||||||| |||||||||||||||||    
T  5491381 ggattctaggatgagggtccaattaggtccctcaccggtggaccacga 5491334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 129
Target Start/End: Complemental strand, 26240919 - 26240872
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggacca 129  Q
    ||||||||||||||||| ||| |||||| |||| ||||||||||||||    
T  26240919 ggtggattctagggtgagggttcaattaagtccctcaccggtggacca 26240872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 2e-51; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 82 - 237
Target Start/End: Complemental strand, 24874626 - 24874471
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 181  Q
    ||||||||||||||||| ||| ||||||||||| ||| ||||||||||||||       |||||||||||||||||||||||||||||||||||||||||    
T  24874626 ggtggattctagggtgagggttcaattaggtccctcatcggtggaccacgagaaaaataccgttagataaaatagatggttaagatttattcaaattaaa 24874527  T
Q  182 agtgagaacatatacaattactcacattcaatcctatcctaacattgtttccacct 237  Q
     ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||    
T  24874526 tgtgagaatatatacaattactcatattcaatcctatcctaacatggtttccacct 24874471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 79 - 221
Target Start/End: Original strand, 767133 - 767275
Alignment:
Q  79 tacggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaatt 178  Q
    |||||||||||||||||||| |||||||||| |||| ||||||||||| || ||        ||||||||| ||||| |||||| |||||||||| ||||    
T  767133 tacggtggattctagggtgagggtccaattaagtccctcaccggtggatcatgaaaaaaacaccgttagattaaatacatggttcagatttattcgaatt 767232  T
Q  179 aaaagtgagaacatatacaattactcacattcaatcctatcct 221  Q
    |||| ||  ||||||||||| ||||||||||||||||||||||    
T  767233 aaaaatggaaacatatacaactactcacattcaatcctatcct 767275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 221
Target Start/End: Complemental strand, 768014 - 767875
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 181  Q
    |||||||| |||||||| |||||||||| |||| |||||||||||||||||        |   |||||||||||||||| | || |||||| ||||||||    
T  768014 ggtggattttagggtgagggtccaattaagtccctcaccggtggaccacgaaaaaaatacaagtagataaaatagatggatcaggtttatttaaattaaa 767915  T
Q  182 agtgagaacatatacaattactcacattcaatcctatcct 221  Q
    | ||| ||||||||||| |||| ||||| |||| ||||||    
T  767914 aatgaaaacatatacaactacttacatttaatcttatcct 767875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 41965825 - 41965775
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacga 132  Q
    ||||||||||||||||| |||||||||| |||| |||||||||||||||||    
T  41965825 ggtggattctagggtgagggtccaattaagtccctcaccggtggaccacga 41965775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 192
Target Start/End: Original strand, 24873751 - 24873861
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 181  Q
    ||||||||||||||||| ||||||||||||||| ||| | |||||||| ||        ||  ||||| |||||  ||||| ||||||||||||||||||    
T  24873751 ggtggattctagggtgagggtccaattaggtccctcatcagtggaccatgaaaaaaacaccaatagattaaataagtggtttagatttattcaaattaaa 24873850  T
Q  182 agtgagaacat 192  Q
    || ||||||||    
T  24873851 agggagaacat 24873861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 223
Target Start/End: Complemental strand, 27918660 - 27918516
Alignment:
Q  80 acggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnn-ccgttagataaaatagatggttaagatttattcaaatt 178  Q
    |||||| ||| |||| ||| ||||||||||||||| ||||||||||| |||||         ||  ||||| |||||||||||| | ||||||| |||      
T  27918660 acggtgaattttaggatgagggtccaattaggtccctcaccggtggatcacgaaaaaaaataccaatagattaaatagatggttcatatttattaaaagc 27918561  T
Q  179 aaaagtgagaacatatacaattactcacattcaatcctatcctaa 223  Q
    || ||||| || || ||||| ||||||||||||||||||||||||    
T  27918560 aatagtgaaaatatgtacaactactcacattcaatcctatcctaa 27918516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 27917764 - 27917834
Alignment:
Q  151 aaatagatggttaagatttattcaaattaaaagtgagaacatatacaattactcacattcaatcctatcct 221  Q
    ||||| ||| || ||||||||||||||||||| |  |||||||||||| || |||||||||||| ||||||    
T  27917764 aaatacatgcttcagatttattcaaattaaaaataggaacatatacaactattcacattcaatcttatcct 27917834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 21975693 - 21975771
Alignment:
Q  84 tggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggtt 162  Q
    ||||||||| || || |||| |||||||||| ||||||||||||||| ||       ||||||||||||||||||||||    
T  21975693 tggattctatggcgagggtctaattaggtccctcaccggtggaccacaagaaaaacaccgttagataaaatagatggtt 21975771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 129
Target Start/End: Complemental strand, 18569067 - 18569020
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggacca 129  Q
    ||||||||||||||||||||||| ||||  ||| ||||||||||||||    
T  18569067 ggtggattctagggtgaaggtcctattaaatccctcaccggtggacca 18569020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 129
Target Start/End: Original strand, 18652891 - 18652938
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggacca 129  Q
    ||||||||||||||||||||||| ||||  ||| ||||||||||||||    
T  18652891 ggtggattctagggtgaaggtcctattaaatccctcaccggtggacca 18652938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 41965112 - 41965162
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacga 132  Q
    ||||||||||||||||| |||||||||| |||| |||  ||||||||||||    
T  41965112 ggtggattctagggtgagggtccaattaagtccctcattggtggaccacga 41965162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 42817798 - 42817846
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccac 130  Q
    |||| |||||||||||| |||||||||| |||| ||| |||||||||||    
T  42817798 ggtgaattctagggtgatggtccaattaagtccctcatcggtggaccac 42817846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 2e-51; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 82 - 237
Target Start/End: Complemental strand, 21281209 - 21281054
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 181  Q
    ||||||||||||||||| ||||||||||| ||| ||| ||||||||||||||       |||||||||||||||||||||||| ||||||||||||||||    
T  21281209 ggtggattctagggtgagggtccaattagatccctcatcggtggaccacgagaaaaacaccgttagataaaatagatggttaaaatttattcaaattaaa 21281110  T
Q  182 agtgagaacatatacaattactcacattcaatcctatcctaacattgtttccacct 237  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  21281109 agtgagaacatatacaattacacacattcaatcttatcctaacatggtttccacct 21281054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 82 - 232
Target Start/End: Original strand, 45140454 - 45140604
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 181  Q
    |||||||||||||||||||||||||| | |||||||| ||| |||| |||||       |   || || |||||||||||| ||||||||||||||||||    
T  45140454 ggtggattctagggtgaaggtccaatcaagtccttcatcggcggacaacgagaaaaacacttatatatgaaatagatggttcagatttattcaaattaaa 45140553  T
Q  182 agtgagaacatatacaattactcacattcaatcctatcctaacattgtttc 232  Q
    |||| |||||| ||||| |||||||||| ||||||||||||| || |||||    
T  45140554 agtgggaacatgtacaactactcacatttaatcctatcctaaaatggtttc 45140604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 45141191 - 45141060
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 181  Q
    ||||||||||||||||| ||||||||||| ||| ||| || ||||||| |||        || ||||| |||||||||||| ||||||||||| ||||||    
T  45141191 ggtggattctagggtgagggtccaattagatccctcatcgatggaccatgagaaaaacaacgatagatgaaatagatggttcagatttattcagattaaa 45141092  T
Q  182 agtgagaacatatacaattactcacattcaat 213  Q
    || || ||||| | ||| |  |||||||||||    
T  45141091 agagataacatgtgcaacttttcacattcaat 45141060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 53778461 - 53778413
Alignment:
Q  84 tggattctagggtgaaggtccaattaggtccttcaccggtggaccacga 132  Q
    ||||||||||||||| |||||| ||| |||| |||||||||||||||||    
T  53778461 tggattctagggtgagggtccatttaagtccctcaccggtggaccacga 53778413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 126
Target Start/End: Original strand, 42792775 - 42792819
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtgga 126  Q
    ||||||||||||||||| |||||||||| |||| |||||| ||||    
T  42792775 ggtggattctagggtgagggtccaattaagtccctcaccgatgga 42792819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 105 - 237
Target Start/End: Complemental strand, 286035 - 285903
Alignment:
Q  105 aattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaaagtgagaacatatacaattactc 204  Q
    |||||||||| | ||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  286035 aattaggtcccttaccggtggaccacgagaaaaacaccgttagataaaatagatggttaagatttattcaaattaaaagtgagaacatatacaattactc 285936  T
Q  205 acattcaatcctatcctaacattgtttccacct 237  Q
    |||||||||||||||||||||| ||||||||||    
T  285935 acattcaatcctatcctaacatggtttccacct 285903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 285183 - 285228
Alignment:
Q  87 attctagggtgaaggtccaattaggtccttcaccggtggaccacga 132  Q
    |||||||||||| ||||||||||||||| | |||||||||||||||    
T  285183 attctagggtgagggtccaattaggtcccttaccggtggaccacga 285228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 82 - 223
Target Start/End: Original strand, 10965230 - 10965371
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 181  Q
    |||||||| ||||||||||||||||||| |||  ||| |||||||||| |||       || |||||| |||||||||||| | ||||||| ||||||||    
T  10965230 ggtggattttagggtgaaggtccaattaagtctctcatcggtggaccatgagaaaaataccattagattaaatagatggttcaaatttatttaaattaaa 10965329  T
Q  182 agtgagaacatatacaattactcacattcaatcctatcctaa 223  Q
    ||||  ||||| ||||| ||||||||||||||||||||||||    
T  10965330 agtggaaacatgtacaactactcacattcaatcctatcctaa 10965371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 82 - 209
Target Start/End: Original strand, 2138477 - 2138603
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 181  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||||||||||       ||  || || |||||||||||| ||||||||||||||||||    
T  2138477 ggtgaattctagggtgagggtccaattaggtccctcaccggtggaccacgagaaaaataccaataaattaaatagatggttgagatttattcaaattaaa 2138576  T
Q  182 agtgagaacatatacaattactcacatt 209  Q
    ||||| ||||| ||||| ||||||||||    
T  2138577 agtga-aacatgtacaactactcacatt 2138603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 82 - 223
Target Start/End: Original strand, 709322 - 709462
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 181  Q
    |||| |||||||| ||| ||||||||||| ||| |||||| |||| ||||||       ||  ||||| |||||||||||| ||||||||||||||||||    
T  709322 ggtgaattctaggatgagggtccaattagatccctcaccgatggatcacgagaaaaataccaatagattaaatagatggttcagatttattcaaattaaa 709421  T
Q  182 agtgagaacatatacaattactcacattcaatcctatcctaa 223  Q
    | ||| || || ||||| ||||||||||||||||||||||||    
T  709422 aatga-aatatgtacaactactcacattcaatcctatcctaa 709462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 133
Target Start/End: Complemental strand, 10966428 - 10966377
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgag 133  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10966428 ggtggattctagggtgaaggtccaattaggtccctcaccggtggaccacgag 10966377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 192
Target Start/End: Original strand, 8113373 - 8113482
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 181  Q
    |||||||||||||| || ||||||||||||||||||| | |||||||||||        ||  || || |||||||||||| | ||||||||||||||||    
T  8113373 ggtggattctagggcgagggtccaattaggtccttcatctgtggaccacgaaaataataccaataaattaaatagatggttcaaatttattcaaattaaa 8113472  T
Q  182 agtgagaacat 192  Q
    || ||||||||    
T  8113473 ag-gagaacat 8113482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 82 - 232
Target Start/End: Original strand, 43453439 - 43453589
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 181  Q
    ||||||||||||||||| ||||||||||  ||| |||||| |||||||||||       ||  ||||| |||||||||||| | ||||||| ||||||||    
T  43453439 ggtggattctagggtgagggtccaattaaatccctcaccgctggaccacgagaaaaataccaatagattaaatagatggttcaaatttatttaaattaaa 43453538  T
Q  182 agtgagaacatatacaattactcacattcaatcctatcctaacattgtttc 232  Q
    | || |||||| ||||| |||||||||||||| ||||||||| || |||||    
T  43453539 attgggaacatgtacaactactcacattcaattctatcctaaaatggtttc 43453589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 82 - 221
Target Start/End: Complemental strand, 14746949 - 14746811
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 181  Q
    ||||||||||||| ||| |||||||||| |||| ||| |||||||||||||        ||||||||| ||||| |||||| | |||||||| |||||||    
T  14746949 ggtggattctagg-tgagggtccaattaagtccctcatcggtggaccacgaaaaaaacaccgttagattaaatacatggttcaaatttattcgaattaaa 14746851  T
Q  182 agtgagaacatatacaattactcacattcaatcctatcct 221  Q
    | ||  ||||||||||| ||||||||||||||||||||||    
T  14746850 aatggaaacatatacaactactcacattcaatcctatcct 14746811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 189
Target Start/End: Complemental strand, 43454210 - 43454103
Alignment:
Q  81 cggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaa 180  Q
    |||||||||||||||||| ||||||||||||||| ||||| ||||||||||||       ||| | |||||||||||||||| ||||||||||||||| |    
T  43454210 cggtggattctagggtgagggtccaattaggtccctcacctgtggaccacgag-aaaacaccgatggataaaatagatggttcagatttattcaaattca 43454112  T
Q  181 aagtgagaa 189  Q
    ||| |||||    
T  43454111 aagagagaa 43454103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 82 - 223
Target Start/End: Complemental strand, 42020934 - 42020793
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 181  Q
    |||| |||||||||||| ||||||||||||||  || |||||||| |||||        ||  ||||| |||||||||||| ||||||||| |||  ||     
T  42020934 ggtgaattctagggtgagggtccaattaggtctctcgccggtggatcacgaaaaaaataccaatagattaaatagatggttcagatttattaaaagcaat 42020835  T
Q  182 agtgagaacatatacaattactcacattcaatcctatcctaa 223  Q
    ||||  ||||| ||||| ||||||||||||||||||||||||    
T  42020834 agtgtaaacatgtacaactactcacattcaatcctatcctaa 42020793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 221
Target Start/End: Original strand, 14746041 - 14746180
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 181  Q
    ||||||||||||||||| ||||||||||  ||| || ||||||||||||||        ||  ||||| |||||||||| | ||||||||| ||||||||    
T  14746041 ggtggattctagggtgagggtccaattaaatccctccccggtggaccacgaaaaaaacgccactagatgaaatagatggatcagatttatttaaattaaa 14746140  T
Q  182 agtgagaacatatacaattactcacattcaatcctatcct 221  Q
    | ||  |||||||||   |||||||||| |||| ||||||    
T  14746141 aatggaaacatatacggctactcacatttaatcttatcct 14746180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 214
Target Start/End: Original strand, 35982554 - 35982627
Alignment:
Q  141 ccgttagataaaatagatggttaagatttattcaaattaaaagtgagaacatatacaattactcacattcaatc 214  Q
    ||||||||| ||||| |||||| |||||||||| |||||||| |   ||||||||||| |||||||||||||||    
T  35982554 ccgttagattaaatacatggttcagatttattcgaattaaaaatagaaacatatacaactactcacattcaatc 35982627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 15287567 - 15287615
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccac 130  Q
    ||||||||||||||||| |||||||||| |||| |||||||||||||||    
T  15287567 ggtggattctagggtgagggtccaattaagtccctcaccggtggaccac 15287615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 133
Target Start/End: Original strand, 16076210 - 16076261
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgag 133  Q
    ||||||||||||||||| ||||||||||||||| |||||  |||||||||||    
T  16076210 ggtggattctagggtgagggtccaattaggtccctcaccaatggaccacgag 16076261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 41419667 - 41419617
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacga 132  Q
    |||||||||||| |||| || |||||||||||| |||||||||||||||||    
T  41419667 ggtggattctagtgtgaggggccaattaggtccctcaccggtggaccacga 41419617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 54308966 - 54309026
Alignment:
Q  172 tcaaattaaaagtgagaacatatacaattactcacattcaatcctatcctaacattgtttc 232  Q
    ||||||||||| ||||||||| ||||| ||||||||||||||| |||| ||| || |||||    
T  54308966 tcaaattaaaattgagaacatgtacaactactcacattcaatcatatcttaaaatggtttc 54309026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 54850580 - 54850612
Alignment:
Q  1 cactatcaacaatctcaagcaagtttcacgttc 33  Q
    |||||||||||||||||||||||||||||||||    
T  54850580 cactatcaacaatctcaagcaagtttcacgttc 54850612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 41418822 - 41418869
Alignment:
Q  144 ttagataaaatagatggttaagatttattcaaattaaaagtgagaacat 192  Q
    |||||| ||||| |||||| |||||||||||||||||||| ||||||||    
T  41418822 ttagattaaataaatggttcagatttattcaaattaaaag-gagaacat 41418869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 7754012 - 7754119
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 181  Q
    ||||||||||||||||| ||||||||||||||| || |||||||| |||||        ||  || ||||||||||| ||| ||||||||||||||||||    
T  7754012 ggtggattctagggtgagggtccaattaggtccctccccggtggatcacgaaaaaaataccaataaataaaatagatagttcagatttattcaaattaaa 7754111  T
Q  182 agtgagaa 189  Q
    || |||||    
T  7754112 agggagaa 7754119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 129
Target Start/End: Complemental strand, 7755015 - 7754968
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggacca 129  Q
    ||||||||||||||||| ||  |||||| |||||||||||||||||||    
T  7755015 ggtggattctagggtgagggatcaattaagtccttcaccggtggacca 7754968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 124
Target Start/End: Complemental strand, 127783 - 127741
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtg 124  Q
    ||||||||||||||||| ||| |||||| ||||||||||||||    
T  127783 ggtggattctagggtgagggttcaattaagtccttcaccggtg 127741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 4716921 - 4716871
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacga 132  Q
    ||||||||||||||||| ||||||||||  | |||||| ||||||||||||    
T  4716921 ggtggattctagggtgagggtccaattaaattcttcactggtggaccacga 4716871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 44296860 - 44296908
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccac 130  Q
    |||| |||||||||||| |||||||||| |||| |||| ||||||||||    
T  44296860 ggtgaattctagggtgagggtccaattaagtccctcactggtggaccac 44296908  T

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Target: chr5 (Bit Score: 34; Significance: 0.0000000003; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 23253534 - 23253485
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacg 131  Q
    ||||||||||||||||| |||||||||| |||| ||||||||| ||||||    
T  23253534 ggtggattctagggtgagggtccaattaagtccctcaccggtgaaccacg 23253485  T

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Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 39466885 - 39466933
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccac 130  Q
    |||| |||||||||||| |||||||||| |||| |||||||||||||||    
T  39466885 ggtgaattctagggtgagggtccaattaagtccctcaccggtggaccac 39466933  T

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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 129
Target Start/End: Original strand, 24565572 - 24565620
Alignment:
Q  81 cggtggattctagggtgaaggtccaattaggtccttcaccggtggacca 129  Q
    |||||||||||||||||| ||| ||||||  ||| ||||||||||||||    
T  24565572 cggtggattctagggtgagggttcaattaaatccctcaccggtggacca 24565620  T

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Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 129
Target Start/End: Original strand, 24606608 - 24606656
Alignment:
Q  81 cggtggattctagggtgaaggtccaattaggtccttcaccggtggacca 129  Q
    |||||||||||||||||| ||| ||||||  ||| ||||||||||||||    
T  24606608 cggtggattctagggtgagggttcaattaaatccctcaccggtggacca 24606656  T

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Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 130
Target Start/End: Complemental strand, 39937954 - 39937906
Alignment:
Q  82 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccac 130  Q
    ||||||||||||||||| ||| || ||| |||| |||||||||||||||    
T  39937954 ggtggattctagggtgagggttcagttaagtccctcaccggtggaccac 39937906  T

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