View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20882_low_6 (Length: 481)

Name: NF20882_low_6
Description: NF20882
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20882_low_6
NF20882_low_6
[»] chr4 (50 HSPs)
chr4 (83-438)||(9770112-9770467)
chr4 (82-436)||(23064737-23065093)
chr4 (82-417)||(5361760-5362093)
chr4 (82-437)||(36120823-36121177)
chr4 (85-439)||(5375666-5376021)
chr4 (83-437)||(9911186-9911541)
chr4 (80-438)||(8889225-8889571)
chr4 (82-380)||(10142898-10143197)
chr4 (84-394)||(17466080-17466390)
chr4 (82-268)||(13023566-13023755)
chr4 (279-439)||(6346728-6346888)
chr4 (82-236)||(13551598-13551752)
chr4 (82-268)||(37240261-37240442)
chr4 (220-405)||(8010943-8011129)
chr4 (279-438)||(7045138-7045299)
chr4 (324-438)||(55476229-55476343)
chr4 (83-216)||(8011212-8011345)
chr4 (307-436)||(13551448-13551577)
chr4 (307-439)||(10394834-10394966)
chr4 (84-177)||(7044728-7044821)
chr4 (279-438)||(24719771-24719923)
chr4 (324-437)||(37240480-37240593)
chr4 (279-377)||(7044959-7045057)
chr4 (284-438)||(7452707-7452860)
chr4 (82-176)||(24719516-24719610)
chr4 (82-187)||(18459733-18459838)
chr4 (83-177)||(4156763-4156857)
chr4 (307-428)||(13023782-13023903)
chr4 (87-187)||(7815561-7815661)
chr4 (315-438)||(18459405-18459528)
chr4 (307-409)||(5943062-5943164)
chr4 (82-187)||(7452419-7452523)
chr4 (325-430)||(4157269-4157377)
chr4 (325-430)||(4157556-4157664)
chr4 (318-392)||(8367437-8367511)
chr4 (82-162)||(6347114-6347194)
chr4 (358-434)||(46664152-46664228)
chr4 (359-430)||(8409792-8409863)
chr4 (227-378)||(9149556-9149709)
chr4 (181-221)||(7044964-7045004)
chr4 (227-266)||(5846065-5846104)
chr4 (83-134)||(9149813-9149864)
chr4 (82-116)||(610686-610720)
chr4 (220-266)||(7825186-7825232)
chr4 (227-265)||(18403672-18403710)
chr4 (231-265)||(24719722-24719756)
chr4 (181-218)||(4157053-4157090)
chr4 (220-265)||(7045078-7045123)
chr4 (227-264)||(55476119-55476156)
chr4 (220-256)||(7815783-7815819)
[»] chr6 (46 HSPs)
chr6 (79-438)||(19748329-19748688)
chr6 (83-434)||(26053074-26053425)
chr6 (83-434)||(26073127-26073478)
chr6 (82-438)||(7223518-7223870)
chr6 (83-419)||(15527903-15528239)
chr6 (82-439)||(23897810-23898166)
chr6 (82-439)||(17543503-17543870)
chr6 (82-439)||(17103201-17103551)
chr6 (82-439)||(11327335-11327701)
chr6 (83-438)||(17250057-17250412)
chr6 (82-437)||(30912181-30912542)
chr6 (82-438)||(27233073-27233407)
chr6 (217-439)||(7918123-7918343)
chr6 (281-438)||(22498214-22498371)
chr6 (80-268)||(21354745-21354925)
chr6 (83-255)||(7918338-7918510)
chr6 (80-340)||(10508889-10509155)
chr6 (91-254)||(22498843-22499006)
chr6 (279-437)||(3573674-3573833)
chr6 (82-208)||(6943464-6943590)
chr6 (318-432)||(31108390-31108504)
chr6 (307-434)||(27614434-27614561)
chr6 (86-242)||(2912218-2912373)
chr6 (318-438)||(27890621-27890741)
chr6 (279-376)||(4841665-4841762)
chr6 (80-175)||(18491074-18491169)
chr6 (80-162)||(5422798-5422880)
chr6 (282-413)||(2912060-2912191)
chr6 (205-260)||(27614594-27614651)
chr6 (319-399)||(20432406-20432486)
chr6 (350-438)||(21354942-21355030)
chr6 (85-160)||(3573984-3574059)
chr6 (324-434)||(33583444-33583554)
chr6 (110-175)||(18490998-18491063)
chr6 (318-438)||(33592925-33593044)
chr6 (343-425)||(31407569-31407651)
chr6 (327-376)||(8275366-8275415)
chr6 (227-266)||(645417-645456)
chr6 (343-434)||(23506102-23506193)
chr6 (228-266)||(5422606-5422644)
chr6 (385-439)||(8275318-8275372)
chr6 (360-394)||(18490522-18490556)
chr6 (327-434)||(1179068-1179177)
chr6 (80-133)||(10958266-10958319)
chr6 (327-376)||(20981363-20981412)
chr6 (229-266)||(27890519-27890556)
[»] chr5 (29 HSPs)
chr5 (84-436)||(18843716-18844068)
chr5 (83-438)||(43234868-43235223)
chr5 (82-438)||(18051307-18051660)
chr5 (82-438)||(19578941-19579299)
chr5 (84-438)||(23172218-23172560)
chr5 (94-437)||(41688441-41688782)
chr5 (91-437)||(27339962-27340307)
chr5 (132-437)||(20320992-20321297)
chr5 (80-390)||(21058978-21059287)
chr5 (81-438)||(22645501-22645850)
chr5 (83-375)||(38158101-38158383)
chr5 (148-265)||(19979664-19979781)
chr5 (83-208)||(20923718-20923843)
chr5 (318-438)||(41427654-41427774)
chr5 (328-437)||(15051872-15051981)
chr5 (279-437)||(43005634-43005792)
chr5 (182-434)||(19042206-19042448)
chr5 (324-437)||(19377844-19377957)
chr5 (361-439)||(6852339-6852417)
chr5 (327-409)||(24648253-24648335)
chr5 (85-157)||(19042444-19042516)
chr5 (318-415)||(22984594-22984695)
chr5 (227-437)||(26021464-26021665)
chr5 (333-380)||(17624851-17624898)
chr5 (318-438)||(13341471-13341591)
chr5 (225-265)||(19377742-19377782)
chr5 (227-266)||(24648160-24648199)
chr5 (359-396)||(15446410-15446447)
chr5 (225-265)||(41427548-41427588)
[»] chr2 (50 HSPs)
chr2 (82-438)||(31237750-31238107)
chr2 (82-437)||(1404782-1405137)
chr2 (82-439)||(20063713-20064079)
chr2 (84-411)||(35565755-35566082)
chr2 (82-380)||(36429847-36430145)
chr2 (82-413)||(15588654-15588979)
chr2 (82-257)||(30432418-30432593)
chr2 (85-268)||(31578007-31578189)
chr2 (243-438)||(19262090-19262285)
chr2 (220-437)||(25538920-25539138)
chr2 (281-437)||(30433013-30433169)
chr2 (324-439)||(20033995-20034110)
chr2 (318-427)||(27523881-27523990)
chr2 (318-440)||(974573-974696)
chr2 (324-438)||(21869095-21869209)
chr2 (82-212)||(23863321-23863451)
chr2 (318-438)||(19245824-19245944)
chr2 (192-374)||(1690566-1690748)
chr2 (324-439)||(7302023-7302138)
chr2 (220-437)||(16766922-16767140)
chr2 (81-178)||(1690796-1690893)
chr2 (83-209)||(19491855-19491982)
chr2 (318-402)||(34578124-34578208)
chr2 (279-402)||(13502483-13502606)
chr2 (327-437)||(8428466-8428576)
chr2 (85-216)||(25539222-25539353)
chr2 (82-188)||(15266081-15266187)
chr2 (279-380)||(27406987-27407088)
chr2 (220-265)||(34841717-34841762)
chr2 (225-265)||(974467-974507)
chr2 (181-221)||(13502561-13502601)
chr2 (82-126)||(19245152-19245196)
chr2 (343-402)||(34167548-34167608)
chr2 (231-266)||(19492079-19492114)
chr2 (182-221)||(27406993-27407032)
chr2 (119-178)||(31023259-31023318)
chr2 (227-266)||(41002156-41002195)
chr2 (80-178)||(5395682-5395780)
chr2 (83-177)||(16766710-16766804)
chr2 (227-265)||(26251658-26251696)
chr2 (344-377)||(9323997-9324030)
chr2 (82-143)||(15627654-15627715)
chr2 (359-396)||(21869215-21869252)
chr2 (225-266)||(21869280-21869321)
chr2 (325-438)||(27749283-27749396)
chr2 (83-128)||(29660893-29660938)
chr2 (359-396)||(34578087-34578124)
chr2 (228-260)||(5395475-5395507)
chr2 (346-437)||(16767185-16767277)
chr2 (349-413)||(23863288-23863352)
[»] chr8 (41 HSPs)
chr8 (80-435)||(5922046-5922400)
chr8 (82-439)||(11879599-11879956)
chr8 (82-439)||(11897015-11897372)
chr8 (83-433)||(45403029-45403379)
chr8 (148-437)||(23142240-23142528)
chr8 (85-417)||(19704252-19704583)
chr8 (85-391)||(15294672-15294977)
chr8 (85-391)||(15475041-15475346)
chr8 (82-438)||(7489057-7489414)
chr8 (84-438)||(29384086-29384444)
chr8 (122-439)||(6810861-6811175)
chr8 (83-437)||(17646993-17647351)
chr8 (82-437)||(31424162-31424518)
chr8 (82-439)||(22909977-22910332)
chr8 (151-380)||(32424400-32424631)
chr8 (87-268)||(3094187-3094378)
chr8 (80-322)||(27836354-27836596)
chr8 (282-437)||(24414062-24414217)
chr8 (171-265)||(9212202-9212296)
chr8 (318-428)||(2040354-2040464)
chr8 (87-265)||(6292289-6292467)
chr8 (316-430)||(16752256-16752370)
chr8 (324-440)||(40541592-40541708)
chr8 (82-158)||(477101-477177)
chr8 (279-390)||(15761180-15761291)
chr8 (327-395)||(7262006-7262074)
chr8 (301-438)||(17566316-17566453)
chr8 (78-178)||(15761473-15761573)
chr8 (330-397)||(27836114-27836181)
chr8 (301-438)||(15231839-15231976)
chr8 (82-186)||(24056594-24056698)
chr8 (80-127)||(23136346-23136393)
chr8 (327-434)||(24056348-24056455)
chr8 (80-124)||(27672303-27672347)
chr8 (279-354)||(8582239-8582314)
chr8 (360-439)||(26879787-26879866)
chr8 (82-144)||(17788374-17788436)
chr8 (227-265)||(40541781-40541819)
chr8 (229-265)||(16752156-16752192)
chr8 (183-215)||(26879778-26879810)
chr8 (183-215)||(30240264-30240296)
[»] chr1 (44 HSPs)
chr1 (79-438)||(9351837-9352196)
chr1 (83-438)||(23528656-23529011)
chr1 (80-438)||(13100188-13100545)
chr1 (82-438)||(18304592-18304941)
chr1 (85-419)||(19009741-19010073)
chr1 (82-439)||(25146541-25146898)
chr1 (82-429)||(9954816-9955165)
chr1 (90-435)||(16125232-16125580)
chr1 (82-436)||(21846050-21846398)
chr1 (84-438)||(42179845-42180193)
chr1 (83-368)||(13276112-13276395)
chr1 (84-438)||(17869524-17869873)
chr1 (85-438)||(12513283-12513626)
chr1 (83-402)||(9128648-9128969)
chr1 (171-435)||(32881415-32881672)
chr1 (82-268)||(9327157-9327345)
chr1 (182-435)||(47785958-47786209)
chr1 (301-437)||(14074258-14074394)
chr1 (279-438)||(17055694-17055852)
chr1 (160-263)||(18228278-18228380)
chr1 (284-439)||(41032546-41032701)
chr1 (82-221)||(41032661-41032800)
chr1 (318-435)||(17197306-17197423)
chr1 (82-216)||(17055995-17056129)
chr1 (301-439)||(30619160-30619296)
chr1 (83-158)||(30619075-30619150)
chr1 (324-435)||(12002638-12002747)
chr1 (83-178)||(14074404-14074499)
chr1 (328-402)||(16434754-16434828)
chr1 (82-187)||(18337547-18337651)
chr1 (343-438)||(27502129-27502224)
chr1 (324-414)||(22789424-22789514)
chr1 (385-438)||(9954770-9954823)
chr1 (82-144)||(34478838-34478900)
chr1 (328-431)||(8773513-8773613)
chr1 (83-171)||(12800622-12800710)
chr1 (348-397)||(9321550-9321599)
chr1 (357-398)||(12002751-12002792)
chr1 (225-266)||(12002818-12002859)
chr1 (364-439)||(13276032-13276104)
chr1 (86-144)||(27917520-27917578)
chr1 (82-127)||(47785791-47785836)
chr1 (86-134)||(12003241-12003289)
chr1 (220-264)||(27917319-27917363)
[»] scaffold0186 (1 HSPs)
scaffold0186 (82-439)||(8442-8797)
[»] chr7 (62 HSPs)
chr7 (83-437)||(44944620-44944978)
chr7 (84-437)||(5058530-5058882)
chr7 (121-437)||(17811385-17811702)
chr7 (82-430)||(27221417-27221762)
chr7 (82-377)||(24725307-24725607)
chr7 (83-438)||(4247356-4247711)
chr7 (82-437)||(14055250-14055610)
chr7 (82-437)||(14365278-14365638)
chr7 (89-435)||(20570662-20571002)
chr7 (82-380)||(8329876-8330175)
chr7 (83-437)||(5715290-5715635)
chr7 (85-380)||(8346363-8346660)
chr7 (80-434)||(8343580-8343932)
chr7 (83-268)||(24990015-24990200)
chr7 (80-266)||(26281256-26281441)
chr7 (92-438)||(11324988-11325333)
chr7 (279-437)||(24989549-24989706)
chr7 (82-236)||(7730319-7730472)
chr7 (83-373)||(6916786-6917068)
chr7 (82-236)||(9685220-9685374)
chr7 (83-245)||(22687631-22687793)
chr7 (90-207)||(8571250-8571367)
chr7 (83-221)||(11326386-11326524)
chr7 (284-438)||(11326484-11326638)
chr7 (82-221)||(39182259-39182397)
chr7 (284-439)||(39182357-39182512)
chr7 (318-435)||(8304321-8304438)
chr7 (80-438)||(26617251-26617608)
chr7 (103-241)||(27509914-27510052)
chr7 (307-436)||(9685070-9685199)
chr7 (318-439)||(25842504-25842625)
chr7 (83-411)||(21846248-21846554)
chr7 (318-436)||(4574965-4575083)
chr7 (220-437)||(26565323-26565540)
chr7 (315-437)||(22687042-22687164)
chr7 (281-438)||(8572336-8572491)
chr7 (324-437)||(23618204-23618317)
chr7 (83-162)||(30294175-30294251)
chr7 (282-398)||(8329793-8329909)
chr7 (294-413)||(1977760-1977878)
chr7 (318-439)||(1981098-1981217)
chr7 (278-380)||(7730191-7730293)
chr7 (359-438)||(10285677-10285756)
chr7 (148-221)||(1977717-1977790)
chr7 (282-434)||(8346244-8346396)
chr7 (359-438)||(8253958-8254037)
chr7 (325-417)||(17741886-17741980)
chr7 (279-357)||(27509267-27509345)
chr7 (318-437)||(21157475-21157587)
chr7 (279-412)||(30294442-30294574)
chr7 (324-428)||(8629512-8629616)
chr7 (349-437)||(26281165-26281251)
chr7 (181-221)||(7730247-7730287)
chr7 (227-266)||(1981282-1981321)
chr7 (360-399)||(17809005-17809044)
chr7 (227-266)||(21157630-21157669)
chr7 (181-215)||(21157522-21157556)
chr7 (227-265)||(25842691-25842729)
chr7 (221-266)||(17809074-17809119)
chr7 (324-373)||(26340212-26340260)
chr7 (92-144)||(17809441-17809493)
chr7 (181-221)||(26565436-26565476)
[»] chr3 (64 HSPs)
chr3 (82-438)||(28745769-28746131)
chr3 (81-439)||(29067282-29067632)
chr3 (86-434)||(39427905-39428258)
chr3 (82-437)||(24619972-24620333)
chr3 (81-437)||(8155904-8156262)
chr3 (88-437)||(17064326-17064661)
chr3 (83-392)||(20756039-20756331)
chr3 (81-437)||(22355841-22356184)
chr3 (156-438)||(42696920-42697202)
chr3 (84-439)||(3449083-3449419)
chr3 (318-438)||(8592173-8592293)
chr3 (240-439)||(25870095-25870294)
chr3 (279-438)||(13286140-13286299)
chr3 (92-412)||(21963438-21963760)
chr3 (92-412)||(21985874-21986196)
chr3 (83-439)||(22137278-22137633)
chr3 (101-268)||(22494732-22494892)
chr3 (279-438)||(6136343-6136502)
chr3 (203-438)||(15515032-15515265)
chr3 (279-434)||(27676632-27676787)
chr3 (83-216)||(24649684-24649818)
chr3 (318-439)||(8560230-8560351)
chr3 (318-430)||(3041458-3041570)
chr3 (324-438)||(20766675-20766789)
chr3 (279-391)||(28135958-28136070)
chr3 (83-209)||(30727694-30727820)
chr3 (82-187)||(27676355-27676460)
chr3 (318-438)||(22971044-22971163)
chr3 (330-438)||(41671426-41671534)
chr3 (279-437)||(10872490-10872648)
chr3 (77-229)||(25870350-25870511)
chr3 (318-437)||(18014226-18014345)
chr3 (318-436)||(19348788-19348906)
chr3 (82-175)||(15806543-15806635)
chr3 (318-438)||(27090677-27090797)
chr3 (279-438)||(9152760-9152917)
chr3 (359-417)||(30727654-30727712)
chr3 (82-179)||(17796267-17796364)
chr3 (82-179)||(17796376-17796473)
chr3 (82-179)||(19104707-19104804)
chr3 (82-179)||(19104816-19104913)
chr3 (373-438)||(24649523-24649588)
chr3 (324-433)||(27055334-27055443)
chr3 (93-187)||(10872971-10873065)
chr3 (347-433)||(13006089-13006174)
chr3 (84-162)||(28135723-28135801)
chr3 (324-412)||(17796806-17796894)
chr3 (324-412)||(19105246-19105334)
chr3 (359-430)||(9169871-9169942)
chr3 (318-434)||(21553671-21553786)
chr3 (82-179)||(17796485-17796582)
chr3 (82-179)||(19104925-19105022)
chr3 (181-221)||(6136457-6136497)
chr3 (225-265)||(8592359-8592399)
chr3 (211-254)||(9152941-9152984)
chr3 (227-265)||(19348684-19348722)
chr3 (227-265)||(27676579-27676617)
chr3 (229-265)||(9169806-9169842)
chr3 (181-221)||(10872603-10872643)
chr3 (181-221)||(13286145-13286185)
chr3 (184-220)||(17796771-17796807)
chr3 (184-220)||(19105211-19105247)
chr3 (181-221)||(27676637-27676677)
chr3 (87-127)||(42696870-42696910)
[»] scaffold0417 (1 HSPs)
scaffold0417 (80-399)||(7268-7587)
[»] scaffold0042 (1 HSPs)
scaffold0042 (82-378)||(93539-93834)
[»] scaffold0016 (2 HSPs)
scaffold0016 (278-438)||(56199-56359)
scaffold0016 (204-258)||(58736-58790)
[»] scaffold0079 (1 HSPs)
scaffold0079 (318-439)||(14699-14820)
[»] scaffold0510 (2 HSPs)
scaffold0510 (82-221)||(91-231)
scaffold0510 (284-413)||(3-131)
[»] scaffold0603 (2 HSPs)
scaffold0603 (220-440)||(8731-8952)
scaffold0603 (82-178)||(9054-9150)
[»] scaffold0017 (2 HSPs)
scaffold0017 (318-439)||(38300-38420)
scaffold0017 (225-265)||(38491-38531)
[»] scaffold0061 (2 HSPs)
scaffold0061 (318-438)||(76083-76202)
scaffold0061 (230-265)||(76273-76308)
[»] scaffold0182 (1 HSPs)
scaffold0182 (318-430)||(24621-24733)
[»] scaffold2084 (1 HSPs)
scaffold2084 (336-439)||(81-184)
[»] scaffold0534 (1 HSPs)
scaffold0534 (301-438)||(888-1025)
[»] scaffold0027 (2 HSPs)
scaffold0027 (318-380)||(132947-133009)
scaffold0027 (228-265)||(133075-133112)
[»] scaffold0028 (1 HSPs)
scaffold0028 (324-437)||(145829-145942)
[»] scaffold0048 (3 HSPs)
scaffold0048 (307-437)||(61089-61219)
scaffold0048 (82-175)||(48825-48918)
scaffold0048 (283-377)||(48497-48591)
[»] scaffold0526 (1 HSPs)
scaffold0526 (318-438)||(8391-8511)
[»] scaffold0036 (1 HSPs)
scaffold0036 (82-187)||(37191-37296)
[»] scaffold0150 (1 HSPs)
scaffold0150 (324-391)||(33179-33246)
[»] scaffold0001 (1 HSPs)
scaffold0001 (318-377)||(142864-142923)
[»] scaffold0115 (1 HSPs)
scaffold0115 (83-168)||(35103-35188)


Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 83 - 438
Target Start/End: Original strand, 9770112 - 9770467
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaa 182  Q
    |||||||| |||||| |||||||||| |||||||| |||||||||||||||| |||||||||   |||||||||||||||||||||||||||||||| ||    
T  9770112 attgttgttaaaatctcgacttaaattctaaaatctaggattttgtgacttttttcaccttcaacgactcaaatccatagtagaatcctaaaatagacaa 9770211  T
Q  183 aatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttgg 282  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||          | ||    
T  9770212 aatctatcaattttgattgcgattttacgatttcttataaactaagttacttatgactatataccattcataacatatatttagtattaatttttttggg 9770311  T
Q  283 taaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaat 382  Q
    |||||| ||| |||||| ||||| |||||||||||| ||| |||||||||||||||| | ||||||||||||||| |||||||||||||||||||||| |    
T  9770312 taaaattcatcgattttgattgcgattttacaatttgctatatcgattctacaaaagaccttgagtaaaatccttcgattttgattgcgattttacgagt 9770411  T
Q  383 ctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    | |||||||||||||||||| |||||| ||||||||| ||||||||||||||||||    
T  9770412 cccgattttgctattccctttcgacctaaagtaaagtcccgattttgacaaccttg 9770467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 82 - 436
Target Start/End: Complemental strand, 23065093 - 23064737
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||| |||| |||||||||||| ||||||||||| ||||||| ||||||||||| |||   ||||||||||||| ||||||| |||||||||       
T  23065093 cattgttgttaaaaccccgacttaaattctaaaatccagtattttgtaactttcttcacattcaacgactcaaatccattgtagaattctaaaataggtc 23064994  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaac--taagtcatttatgactatataccatttataacatatatttagtannnnnnnnngt 279  Q
    ||||||||| ||||| ||||  |||||||||||||||||||||  |||||||||||||||  |||| ||||||||||||||||||||||          |    
T  23064993 aaatccatcgattttaattgcaattttacgatttcttataaactataagtcatttatgaccctatatcatttataacatatatttagtattattattttt 23064894  T
Q  280 tggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacg 379  Q
    ||||||||||  | |||||| ||||| |||||||||||||||| |||||||||||||||||| |||| ||||||||||  ||||||||||||||||||||    
T  23064893 tggtaaaatcattcgattttgattgcaattttacaatttcctatatcgattctacaaaagtccttgaataaaatccttcaattttgattgcgattttacg 23064794  T
Q  380 aatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaacct 436  Q
    | |  |||||| | ||||||||| |||||||||||||||| ||||||||||||||||    
T  23064793 agttccgatttcgttattccctttcgacctgaagtaaagtcccgattttgacaacct 23064737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 82 - 417
Target Start/End: Complemental strand, 5362093 - 5361760
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||| ||||   ||||||||||||||||||||| | |||||||  |    
T  5362093 cattgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcatcttcaacgactcaaatccatagtagaattccaaaataggca 5361994  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttg 281  Q
    ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||          |||    
T  5361993 aaacccatcgattttgattgagattttacgatttcttataaactaagtcatttatgattatataccatttttaacatatatttagtatttttctt--ttg 5361896  T
Q  282 gtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaa 381  Q
    || |||||||| || ||| ||||| ||||||| ||||| || |||||||||||||||||  |||||||||| |||| ||||||| |||| |||||||||     
T  5361895 gtcaaatccatcgactttgattgcgattttacgatttcatatatcgattctacaaaagtagttgagtaaaacccttcgattttgtttgcaattttacgat 5361796  T
Q  382 tctcgattttgctattcccttccgacctgaagtaaa 417  Q
    | || |||||||| ||| ||| ||||||||| ||||    
T  5361795 tgtctattttgctcttctctttcgacctgaaataaa 5361760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 82 - 437
Target Start/End: Original strand, 36120823 - 36121177
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||||||||| |||| ||||||  ||||||  ||||||||| || |||||||||||||   |||| ||||||||| || ||| ||||||||   |    
T  36120823 cattgttgtcaaaattccgatttaaattttaaaatttaggattttgcgattttcttcaccttcaacgacttaaatccataataaaattctaaaataagca 36120922  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttg 281  Q
    |||| |||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||          |||    
T  36120923 aaattcatcgattttgattgcgattttacgatttcttatatactaagtcatttatgactatataccatttataaaatatatttagtattattattt-ttg 36121021  T
Q  282 gtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaa 381  Q
    ||||||||||| |||||| ||||| |||||||||||||||| |||||| ||||||||||| |||||||||||| || |||||||||| |||||||||||     
T  36121022 gtaaaatccatcgattttgattgcgattttacaatttcctatatcgatactacaaaagtccttgagtaaaatctttcgattttgattccgattttacgag 36121121  T
Q  382 tctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaacctt 437  Q
    || |||||  ||||||||||| | || ||||||||||  |||||||||||||||||    
T  36121122 tcccgattaagctattccctttcaacttgaagtaaagacccgattttgacaacctt 36121177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 85 - 439
Target Start/End: Original strand, 5375666 - 5376021
Alignment:
Q  85 tgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaaa 184  Q
    ||||||||||||||| || ||||| |||||||  | ||||||| ||||||||||||||||   |||| |||| |||| ||||||  ||||||||| ||||    
T  5375666 tgttgtcaaaatcccaacctaaattctaaaatttaagattttgcgactttcttcaccttcaacgactaaaattcataatagaattttaaaatagacaaaa 5375765  T
Q  185 tccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngtt-ggt 283  Q
    | |||| | |||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||          || |||    
T  5375766 ttcatcgactttgattgcgattttacgatttcttataaactaagtcatttatgaccatatatcatttataacatatatttagtattaattttttttgggt 5375865  T
Q  284 aaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatc 383  Q
    ||||||||| |||||| ||||  |||||||||||||||| || ||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| ||    
T  5375866 aaaatccatcgattttgattgtgattttacaatttcctatatagattctacagaagtccttgagtaaaatccttcgattttgattgcgattttacgagtc 5375965  T
Q  384 tcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttgg 439  Q
     ||||||| |||||   ||  ||||||||||||||| || ||||||||||||||||    
T  5375966 ccgattttactatttatttttgacctgaagtaaagtcccaattttgacaaccttgg 5376021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 83 - 437
Target Start/End: Complemental strand, 9911541 - 9911186
Alignment:
Q  83 attgttgtcaaaatcccgacttaaa-tactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||| ||||||||| ||||| | ||||||| || |||||||  |||||||||||||||   | |  |||||||||||||||||||||||| |  |    
T  9911541 attgttgtctaaatcccgatttaaaatcctaaaattcaagattttgcaactttcttcaccttcaacggcctaaatccatagtagaatcctaaaattggca 9911442  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttg 281  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||          |||    
T  9911441 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatataccatttataacatatattaagtattattattttttg 9911342  T
Q  282 gtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaa 381  Q
    ||||| ||||| |||||| ||||| ||||||||||||| || |||||||||||||||||  | ||||||||||||| | |||| |||||||||||||||     
T  9911341 gtaaagtccatcgattttgattgcgattttacaatttcttatatcgattctacaaaagttctcgagtaaaatccttcgttttttattgcgattttacgag 9911242  T
Q  382 tctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaacctt 437  Q
    || ||||||| |||||||||| |||  ||||||||||| |  ||||||||| ||||    
T  9911241 tcccgattttactattccctttcgatatgaagtaaagtcctaattttgacaccctt 9911186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 80 - 438
Target Start/End: Original strand, 8889225 - 8889571
Alignment:
Q  80 accattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaataga 179  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||   ||||||||| |||| |||||||| |||||||     
T  8889225 accattgatgtcaaaatcccgacttaaatcctaaaatccaggattttgtgaatttcttcaccatcaacgactcaaattcataatagaatcccaaaatagg 8889324  T
Q  180 aaaaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngt 279  Q
     ||||| |||| |||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||         ||    
T  8889325 caaaattcatcgattttgattgcgattttacgatttcttataaaccaagtcgtttatgactatataccatttataatatatatttagta--tttttttgt 8889422  T
Q  280 tggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacg 379  Q
    ||||||||| ||| |||||| ||||| ||||||||||||         |||||||||||||  |||||||| |||||| ||||||| ||||||||||||     
T  8889423 tggtaaaattcatcgattttgattgcgattttacaattt---------attctacaaaagtagttgagtaagatccttcgattttggttgcgattttaca 8889513  T
Q  380 aatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    | | || ||||||||  || ||| |||||||||| ||| | ||||||||||||||||||    
T  8889514 attgtcaattttgct-ctctctttcgacctgaagcaaaatcccgattttgacaaccttg 8889571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 82 - 380
Target Start/End: Original strand, 10142898 - 10143197
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||| ||||||||||||||||| |||||||  |  |||||| |||||||| |||||||  |||||||| ||||||||| ||| | |||||||| |    
T  10142898 cattgttgtgaaaatcccgacttaaattctaaaatttaatattttgcgactttctccaccttcaatgactcaagtccatagtataattccaaaatagaca 10142997  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagta-nnnnnnnnngtt 280  Q
    ||||||||| |||||||||| |||||||||||||||||||||  ||||||||||||||||||||||| |||||| ||||||||||||           ||    
T  10142998 aaatccatcgattttgattgtgattttacgatttcttataaatcaagtcatttatgactatataccaattataatatatatttagtattatttttttttt 10143097  T
Q  281 ggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacga 380  Q
    | ||||||||||  ||||| ||||| |||||||||| || || ||||||||||||||| |  |||| |||||||||| ||||||||||||||||||||||    
T  10143098 gataaaatccatcaattttgattgcgattttacaatctcttatatcgattctacaaaattagttgaataaaatccttcgattttgattgcgattttacga 10143197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 84 - 394
Target Start/End: Original strand, 17466080 - 17466390
Alignment:
Q  84 ttgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaa 183  Q
    ||||||||||||| || ||||||||  ||||||  ||||||||| || |||||||| |||    |||||||||||||| |||||||||||||||   |||    
T  17466080 ttgttgtcaaaattccaacttaaatcttaaaatttaggattttgcgattttcttcatctttaaggactcaaatccataatagaatcctaaaataagcaaa 17466179  T
Q  184 atccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttggt 283  Q
    ||||||| |||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||           | ||    
T  17466180 atccatcgatttagattgcgattttacgatttctaataaactaagtcatttatgactatataccatttataacatatatttaatattatttttttgttgt 17466279  T
Q  284 aaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatc 383  Q
    ||||||||| |||||| ||||| ||||||||||||| || |||||||| ||||||||  ||||||| |||| ||  |||||| |||| ||||||||| |     
T  17466280 aaaatccatcgattttgattgcaattttacaatttcttatatcgattccacaaaagtagttgagtataatctttcaattttgtttgcaattttacgattg 17466379  T
Q  384 tcgattttgct 394  Q
    |||||||||||    
T  17466380 tcgattttgct 17466390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 82 - 268
Target Start/End: Original strand, 13023566 - 13023755
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaa-tccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaa--tag 178  Q
    |||||||||||||||||| |||||||| |||||| |  ||||||||| ||||||||||||||||  |||||||||||||||||||||||| ||||  |||    
T  13023566 cattgttgtcaaaatcccaacttaaatcctaaaaatttaggattttgcgactttcttcaccttcaatgactcaaatccatagtagaatcccaaaaaatag 13023665  T
Q  179 aaaaaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagta 268  Q
    | |||||| ||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13023666 ataaaatcaatcgattttgattgcgattttacgattttttataaactaagtcatttatgactatataccatttataacatatatttagta 13023755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 279 - 439
Target Start/End: Complemental strand, 6346888 - 6346728
Alignment:
Q  279 ttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttac 378  Q
    ||||| |||||||| |||||| ||||| ||||||||||||| || ||  |||||||||||||  ||||||||||||||| ||||||||||| ||||||||    
T  6346888 ttggtgaaatccatcgattttgattgcgattttacaatttcttatattcattctacaaaagtagttgagtaaaatccttcgattttgattgtgattttac 6346789  T
Q  379 gaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttgg 439  Q
    || | ||||||||||| ||||||| |||||||||| ||| |||||||||||||||||||||    
T  6346788 gattttcgattttgctcttccctttcgacctgaagcaaatttccgattttgacaaccttgg 6346728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 82 - 236
Target Start/End: Complemental strand, 13551752 - 13551598
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    |||||||||||||||| ||||||| || |||||||  ||||||||| |||||| |||||||||   |||||||||||||| ||||||   |||||||| |    
T  13551752 cattgttgtcaaaatctcgacttatatcctaaaatttaggattttgcgacttttttcaccttcaacgactcaaatccatattagaatttcaaaatagaca 13551653  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttat 236  Q
    ||||||||| ||||| |||| ||||||| ||||||||||||||||||||||||||    
T  13551652 aaatccatcgattttaattgcgattttatgatttcttataaactaagtcatttat 13551598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 82 - 268
Target Start/End: Original strand, 37240261 - 37240442
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||| |||||||| |||||||| |||||||  ||    ||  |||||| |||||||||   |||||||||||||||||||| || |||||||  |    
T  37240261 cattgttgttaaaatccctacttaaatcctaaaatttag----ttacgacttttttcaccttcaacgactcaaatccatagtagaaccc-aaaataggca 37240355  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagta 268  Q
     ||| |||| |||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||    
T  37240356 taattcatcgattttgattgcgattttacgatttcttataaattaagtcatttatgactctataccatttatatcatatatttagta 37240442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 220 - 405
Target Start/End: Complemental strand, 8011129 - 8010943
Alignment:
Q  220 taaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngtt-ggtaaaatccattgattttaattgctattttacaattt 318  Q
    |||||||| |||||||| | ||||||| ||||||||||||||||||| |          || |||||||| ||| |||||| ||||| ||||||||||||    
T  8011129 taaactaattcatttataattatatacaatttataacatatatttagcattatttttgttttggtaaaatacatcgattttgattgcgattttacaattt 8011030  T
Q  319 cctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccg 405  Q
    | || |||||||||| |||| |  ||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||    
T  8011029 cttatatcgattctataaaaatagttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctattcccttccg 8010943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 279 - 438
Target Start/End: Original strand, 7045138 - 7045299
Alignment:
Q  279 ttggtaaaatccattgattttaattgctattttacaatttcctagatc--gattctacaaaagtctttgagtaaaatcctttgattttgattgcgatttt 376  Q
    ||||||| |||||| |||||| |||| |||||||| ||||| || |||  ||||||  |||||   ||||||||||||||| ||||||||||||||||||    
T  7045138 ttggtaagatccatagattttgattgatattttacgatttcttatatctcgattcttgaaaagcagttgagtaaaatccttcgattttgattgcgatttt 7045237  T
Q  377 acgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    | || | | ||||||||| ||||||| |||||||||||||| |||| |||||||||||||||    
T  7045238 atgatttttgattttgctcttccctttcgacctgaagtaaaattcctattttgacaaccttg 7045299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 324 - 438
Target Start/End: Original strand, 55476229 - 55476343
Alignment:
Q  324 atcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccg 423  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |  |||||||  || |||||| |||| ||||||||||| |||    
T  55476229 atcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtaccgattttattactccctttcgacttgaagtaaagtcccg 55476328  T
Q  424 attttgacaaccttg 438  Q
    ||||||| |||||||    
T  55476329 attttgataaccttg 55476343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 83 - 216
Target Start/End: Complemental strand, 8011345 - 8011212
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaa 182  Q
    ||||||||||||||||| ||| |||| ||||||| |||||||||| ||||||||||||||||   ||||||||||||||||||||||| |||||    ||    
T  8011345 attgttgtcaaaatcccaactcaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatgagcaa 8011246  T
Q  183 aatccatcaattttgattgagattttacgatttc 216  Q
    ||| |||| |||||||||| |||||| |||||||    
T  8011245 aattcatcgattttgattgcgattttgcgatttc 8011212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 307 - 436
Target Start/End: Complemental strand, 13551577 - 13551448
Alignment:
Q  307 attttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccga 406  Q
    |||||| ||||| ||| |||||||||| ||||||| | ||||||||||||| |||||| ||||||||||||||| ||| |||||||||||||| || |||    
T  13551577 attttaaaattttctaaatcgattctataaaagtcctcgagtaaaatccttcgattttaattgcgattttacgagtcttgattttgctattccttttcga 13551478  T
Q  407 cctgaagtaaagttccgattttgacaacct 436  Q
    || |||||||||| | ||| || |||||||    
T  13551477 ccagaagtaaagtccggatctttacaacct 13551448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 307 - 439
Target Start/End: Original strand, 10394834 - 10394966
Alignment:
Q  307 attttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccga 406  Q
    ||||||| |||||||| | |||||||||||||||  ||||||||| ||||| |||||||||||||||||||||| | | ||||||||| || | || | |    
T  10394834 attttacgatttcctataccgattctacaaaagtagttgagtaaagtccttcgattttgattgcgattttacgatttttgattttgctctttcttttcaa 10394933  T
Q  407 cctgaagtaaagttccgattttgacaaccttgg 439  Q
    | ||||| ||| |||| ||||||||||||||||    
T  10394934 cttgaagcaaaattccaattttgacaaccttgg 10394966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 84 - 177
Target Start/End: Original strand, 7044728 - 7044821
Alignment:
Q  84 ttgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaata 177  Q
    ||||||||||||||||||||||||| |||||||||| |||||||  ||||| |||||||||   ||||||||||||||| ||||||| ||||||    
T  7044728 ttgttgtcaaaatcccgacttaaatcctaaaatccatgattttgcaactttattcaccttcaacgactcaaatccatagcagaatcccaaaata 7044821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 279 - 438
Target Start/End: Original strand, 24719771 - 24719923
Alignment:
Q  279 ttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttac 378  Q
    |||||||||  ||| |||||| ||||| ||||||| ||||| || |||||||||||||||||  | ||||||||||||| |||| ||||| |||||||      
T  24719771 ttggtaaaactcatcgattttgattgcgattttacgatttcttatatcgattctacaaaagtaatcgagtaaaatccttcgattgtgatttcgatttt-- 24719868  T
Q  379 gaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
         ||||||||||| ||||||| |||||||||| ||| |  |||||||||||||||||    
T  24719869 -----tcgattttgctcttccctttcgacctgaagcaaaatctcgattttgacaaccttg 24719923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 324 - 437
Target Start/End: Original strand, 37240480 - 37240593
Alignment:
Q  324 atcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccg 423  Q
    |||||||||||||||||  ||||||||||||||| |||||||||||||||||||||| | ||||||| ||| ||| ||| || ||||||| |||  ||      
T  37240480 atcgattctacaaaagtagttgagtaaaatccttcgattttgattgcgattttacgattgtcgatttagctcttctctttcgtcctgaagcaaaactcta 37240579  T
Q  424 attttgacaacctt 437  Q
    ||||||||||||||    
T  37240580 attttgacaacctt 37240593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 279 - 377
Target Start/End: Original strand, 7044959 - 7045057
Alignment:
Q  279 ttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgatttta 377  Q
    |||||||||||||| |||||| |||| |||||||| ||||| || ||||||| | |||||||  |||||||||||| || |||||||||||||||||||    
T  7044959 ttggtaaaatccatcgattttgattgatattttacgatttcttatatcgattattcaaaagtagttgagtaaaatcattcgattttgattgcgatttta 7045057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 284 - 438
Target Start/End: Original strand, 7452707 - 7452860
Alignment:
Q  284 aaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatc 383  Q
    ||||||||| ||||||| |||   |||||| ||||| || || ||||||||||||||  ||||||||| ||||| |||||||||||||||||||||| |     
T  7452707 aaaatccatcgattttagttgtgcttttacgatttcgtatattgattctacaaaagtagttgagtaaa-tccttcgattttgattgcgattttacgattt 7452805  T
Q  384 tcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    || | ||| || ||||||| |||||||||| ||| | |  |||||||||||||||    
T  7452806 tcaacttttctcttccctttcgacctgaagcaaaatcctaattttgacaaccttg 7452860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 82 - 176
Target Start/End: Original strand, 24719516 - 24719610
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaat 176  Q
    |||||||||||||||| |||||||| | ||||||| || ||||||| |||||| |||||||||   ||||||||||||||| |||||||||||||    
T  24719516 cattgttgtcaaaatctcgacttaatttctaaaattcaagattttgcgactttattcaccttcaacgactcaaatccatagcagaatcctaaaat 24719610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 82 - 187
Target Start/End: Complemental strand, 18459838 - 18459733
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||| |||||||||||| |||| |||||||||| ||||||| |||| | ||||| |||   ||||||||||||||| |||||||||||||||  |    
T  18459838 cattgttgtaaaaatcccgactaaaatcctaaaatccaagattttgcgactgtattcactttcaacgactcaaatccatagcagaatcctaaaataggca 18459739  T
Q  182 aaatcc 187  Q
    ||||||    
T  18459738 aaatcc 18459733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 83 - 177
Target Start/End: Original strand, 4156763 - 4156857
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaata 177  Q
    ||||||||||||||||||||||||||  ||||||  |||||||| ||||||| ||||||||    ||||||||||  ||||||||||||||||||    
T  4156763 attgttgtcaaaatcccgacttaaatcttaaaatttaggattttatgactttattcacctttaacgactcaaatctgtagtagaatcctaaaata 4156857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 307 - 428
Target Start/End: Original strand, 13023782 - 13023903
Alignment:
Q  307 attttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccga 406  Q
    |||||| ||||||||| ||||||| ||||||| || ||| |||||||| ||  || ||||||| |||||||||| |  |||||||||||||| ||| |||    
T  13023782 attttaaaatttcctatatcgattttacaaaattccttgggtaaaatcattctatcttgattgtgattttacgagttccgattttgctattctctttcga 13023881  T
Q  407 cctgaagtaaagttccgatttt 428  Q
    | ||||||||||| || |||||    
T  13023882 cttgaagtaaagtcccaatttt 13023903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 7815561 - 7815661
Alignment:
Q  87 ttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaaatc 186  Q
    |||| ||||||||||||||||| ||||||| ||| ||||||||||||| |||| |||    |||||||| |||||||||||||| |||||||  ||||||    
T  7815561 ttgttaaaatcccgacttaaatcctaaaatacagcattttgtgactttattcagcttaagcgactcaaacccatagtagaatcccaaaataggcaaaatc 7815660  T
Q  187 c 187  Q
    |    
T  7815661 c 7815661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 315 - 438
Target Start/End: Complemental strand, 18459528 - 18459405
Alignment:
Q  315 atttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagt 414  Q
    ||||| || ||| ||||||||||| |  || ||| |||||||| |||||| ||||||||||||||| | ||||||||||| || |||| | ||||||||     
T  18459528 atttcttatatcaattctacaaaattagttaagtcaaatccttcgattttaattgcgattttacgattgtcgattttgctctttcctttcaacctgaagc 18459429  T
Q  415 aaagttccgattttgacaaccttg 438  Q
    ||| |  |||||||||||||||||    
T  18459428 aaaatctcgattttgacaaccttg 18459405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 409
Target Start/End: Complemental strand, 5943164 - 5943062
Alignment:
Q  307 attttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccga 406  Q
    ||||||| ||||| || | |||||||||||||||  |||||||||||||||  |||||  |||||||||||||| | | ||||||||| ||||||| |||    
T  5943164 attttacgatttcttaaaccgattctacaaaagtagttgagtaaaatccttcaattttacttgcgattttacgatttttgattttgctcttccctttcga 5943065  T
Q  407 cct 409  Q
    |||    
T  5943064 cct 5943062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 82 - 187
Target Start/End: Original strand, 7452419 - 7452523
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||| ||||||||||||||||| ||||||||||| ||||||  ||||| |||||||||   ||||| |||||||||| || |||||| ||||  |    
T  7452419 cattgttgtgaaaatcccgacttaaattctaaaatccagaattttgcaactttattcaccttcaacgactc-aatccatagtggattcctaatataggca 7452517  T
Q  182 aaatcc 187  Q
    ||||||    
T  7452518 aaatcc 7452523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 430
Target Start/End: Original strand, 4157269 - 4157377
Alignment:
Q  325 tcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttac---gaatctcgattttgctattcccttccgacctgaagtaaagttc 421  Q
    ||||||||||||||||  |||||||||||| || ||| ||||||||||||||||   || | ||||||||||| ||||||| |||| | ||| ||| | |    
T  4157269 tcgattctacaaaagtagttgagtaaaatctttcgatcttgattgcgattttacaatgattttcgattttgctcttccctttcgacttaaagcaaaatcc 4157368  T
Q  422 cgattttga 430  Q
    |||||||||    
T  4157369 cgattttga 4157377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 430
Target Start/End: Original strand, 4157556 - 4157664
Alignment:
Q  325 tcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttac---gaatctcgattttgctattcccttccgacctgaagtaaagttc 421  Q
    ||||||||||||||||  |||||||||||| || ||| ||||||||||||||||   || | ||||||||||| ||||||| |||| | ||| ||| | |    
T  4157556 tcgattctacaaaagtagttgagtaaaatctttcgatcttgattgcgattttacaatgattttcgattttgctcttccctttcgacttaaagcaaaatcc 4157655  T
Q  422 cgattttga 430  Q
    |||||||||    
T  4157656 cgattttga 4157664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 8367437 - 8367511
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttg 392  Q
    ||||| ||||||  ||| |||||| ||||||||||||||| |||||||||||| ||||||||| || ||||||||    
T  8367437 tcctatatcgatattaccaaagtccttgagtaaaatccttcgattttgattgcaattttacgagtcccgattttg 8367511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 82 - 162
Target Start/End: Complemental strand, 6347194 - 6347114
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatag 162  Q
    |||| |||||||||| || |||||||| ||||||||||||||||||  ||||| || ||||||   |||||||||||||||    
T  6347194 cattattgtcaaaattccaacttaaatcctaaaatccaggattttgcaactttatttaccttcaacgactcaaatccatag 6347114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 434
Target Start/End: Complemental strand, 46664228 - 46664152
Alignment:
Q  358 tgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaac 434  Q
    ||||||||||||||||||| ||| | |||||||||||||| | || |||||||||| ||| | || |||||||||||    
T  46664228 tgattttgattgcgattttccgattttcgattttgctatttcttttcgacctgaagcaaaatcccaattttgacaac 46664152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 359 - 430
Target Start/End: Original strand, 8409792 - 8409863
Alignment:
Q  359 gattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttga 430  Q
    |||||||||| ||||||||  |||||| ||||||||| |||||| | || ||||||||||| ||||||||||    
T  8409792 gattttgattacgattttataaatctcaattttgctactccctttcaacttgaagtaaagtcccgattttga 8409863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 378
Target Start/End: Complemental strand, 9149709 - 9149556
Alignment:
Q  227 agtcatttatgactatataccatttataacatatatttagtannnnnnnnngtt-ggtaaaatccattgattttaattgc-tattttacaatttcctaga 324  Q
    |||||||||| ||||||||| ||||||||||||||||||| |          || ||||||||| ||  ||||| ||||| | |||||| ||||| || |    
T  9149709 agtcatttataactatatacaatttataacatatatttagcattatttttcttttggtaaaatctatcaattttgattgcgttttttacgatttcttata 9149610  T
Q  325 tcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttac 378  Q
    |||||||||| |||||  |||||||||||||||  ||||||||||  |||||||    
T  9149609 tcgattctacgaaagtagttgagtaaaatccttcaattttgattggaattttac 9149556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 7044964 - 7045004
Alignment:
Q  181 aaaatccatcaattttgattgagattttacgatttcttata 221  Q
    |||||||||| ||||||||||| ||||||||||||||||||    
T  7044964 aaaatccatcgattttgattgatattttacgatttcttata 7045004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 5846104 - 5846065
Alignment:
Q  227 agtcatttatgactatataccatttataacatatatttag 266  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  5846104 agtcatttatgacaatatacaatttataacatatatttag 5846065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 9149864 - 9149813
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgacttt 134  Q
    ||||| |||||||||||||||||||| |||||||  ||||||||| ||||||    
T  9149864 attgtggtcaaaatcccgacttaaatcctaaaatttaggattttgcgacttt 9149813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 116
Target Start/End: Complemental strand, 610720 - 610686
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaat 116  Q
    |||||||||||||||||| ||||||||||||||||    
T  610720 cattgttgtcaaaatcccaacttaaatactaaaat 610686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 7825186 - 7825232
Alignment:
Q  220 taaactaagtcatttatgactatataccatttataacatatatttag 266  Q
    |||||| |||||||||||||||||||| ||||||||| | |||||||    
T  7825186 taaactgagtcatttatgactatatacaatttataacttgtatttag 7825232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 265
Target Start/End: Original strand, 18403672 - 18403710
Alignment:
Q  227 agtcatttatgactatataccatttataacatatattta 265  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  18403672 agtcattcatgactatatacaatttataacatatattta 18403710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 265
Target Start/End: Original strand, 24719722 - 24719756
Alignment:
Q  231 atttatgactatataccatttataacatatattta 265  Q
    |||||||||||||||| ||||||||||||||||||    
T  24719722 atttatgactatatacaatttataacatatattta 24719756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 4157053 - 4157090
Alignment:
Q  181 aaaatccatcaattttgattgagattttacgatttctt 218  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  4157053 aaaatccatcgattttgattgcgattttacgatttctt 4157090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 7045078 - 7045123
Alignment:
Q  220 taaactaagtcatttatgactatataccatttataacatatattta 265  Q
    |||||| |||||||||| ||||||||| | ||||||||||||||||    
T  7045078 taaactgagtcatttatcactatatacaaattataacatatattta 7045123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 264
Target Start/End: Original strand, 55476119 - 55476156
Alignment:
Q  227 agtcatttatgactatataccatttataacatatattt 264  Q
    |||||||||||||||||| | |||||||||||||||||    
T  55476119 agtcatttatgactatatgcaatttataacatatattt 55476156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 7815783 - 7815819
Alignment:
Q  220 taaactaagtcatttatgactatataccatttataac 256  Q
    |||||| |||||||||||||||||||| |||||||||    
T  7815783 taaactgagtcatttatgactatatacaatttataac 7815819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 205; Significance: 1e-112; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 79 - 438
Target Start/End: Original strand, 19748329 - 19748688
Alignment:
Q  79 caccattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatag 178  Q
    |||||||||| |||||||||||||||||||  || |||||||||||||| || ||||||||||||   |||||||||||| |||||||||| ||||||||    
T  19748329 caccattgttttcaaaatcccgacttaaatcttacaatccaggattttgagattttcttcacctttaatgactcaaatccgtagtagaatcttaaaatag 19748428  T
Q  179 aaaaaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnng 278  Q
      ||||| |||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||              
T  19748429 gcaaaattcatcgattttgattgtgattttacgatttcttataaactaagtcatttaagactatatatcatttataaaatatatttagtattattatttt 19748528  T
Q  279 ttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttac 378  Q
     ||||||||||||| |||||| ||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  19748529 ctggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttac 19748628  T
Q  379 gaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    ||||| |||||||||||||||||| | ||||||| |||||| ||||||||||||||||||    
T  19748629 gaatcccgattttgctattccctttcaacctgaattaaagtcccgattttgacaaccttg 19748688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 83 - 434
Target Start/End: Complemental strand, 26053425 - 26053074
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaa 182  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||| ||||||||||||||||  |||||||||| |||| |||||||| ||||||   ||    
T  26053425 attgttgtcaaaatcccgacttaaatcttaaaatctaggattttgcgactttcttcaccttcaatgactcaaattcataatagaatcccaaaataagcaa 26053326  T
Q  183 aatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttgg 282  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||          ||||    
T  26053325 aatccatcaattttgattgtcattttacgatttcttataaactaagttatttatgactatataccatttataacatatagttagtattattattttttgg 26053226  T
Q  283 taaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaat 382  Q
    |||||||||| |||||| ||||| |||||||||||||| | |||||||||||||||||| |||||||||||| || ||||||||||| |||||||||| |    
T  26053225 taaaatccatcgattttgattgcgattttacaatttccaatatcgattctacaaaagtcattgagtaaaatcattcgattttgattgggattttacgagt 26053126  T
Q  383 ctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaac 434  Q
    | | ||||||||||| |||| |||||||||||||||| | ||||||||||||    
T  26053125 cccaattttgctatttcctttcgacctgaagtaaagtcctgattttgacaac 26053074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 83 - 434
Target Start/End: Complemental strand, 26073478 - 26073127
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaa 182  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||| ||||||||||||||||  |||||||||| |||| |||||||| ||||||   ||    
T  26073478 attgttgtcaaaatcccgacttaaatcttaaaatctaggattttgcgactttcttcaccttcaatgactcaaattcataatagaatcccaaaataagcaa 26073379  T
Q  183 aatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttgg 282  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||          ||||    
T  26073378 aatccatcaattttgattgtcattttacgatttcttataaactaagttatttatgactatataccatttataacatatagttagtattattattttttgg 26073279  T
Q  283 taaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaat 382  Q
    |||||||||| |||||| ||||| |||||||||||||| | |||||||||||||||||| |||||||||||| || ||||||||||| |||||||||| |    
T  26073278 taaaatccatcgattttgattgcgattttacaatttccaatatcgattctacaaaagtcattgagtaaaatcattcgattttgattgggattttacgagt 26073179  T
Q  383 ctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaac 434  Q
    | | ||||||||||| |||| |||||||||||||||| | ||||||||||||    
T  26073178 cccaattttgctatttcctttcgacctgaagtaaagtcctgattttgacaac 26073127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 82 - 438
Target Start/End: Original strand, 7223518 - 7223870
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||||||||||||||||||||| |||||||  ||||||||| ||||||||||||||       || |||||||||||||||| | ||||||   |    
T  7223518 cattgttgtcaaaatcccgacttaaatcctaaaatttaggattttgcgactttcttcacct-------cttaaatccatagtagaattccaaaataagca 7223610  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatt----tagtannnnnnnnn 277  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||             
T  7223611 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatataccatttataacatatattaatttagtattattttgt 7223710  T
Q  278 gttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgatttta 377  Q
     ||||||||||||||||||| | ||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||| ||||||    
T  7223711 -ttggtaaaatccattgattctgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcaatttta 7223809  T
Q  378 cgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    ||| || |||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  7223810 cgagtcccgattttgctattccctttcgacctgaagtaaagtcccgattttgacaaccttg 7223870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 83 - 419
Target Start/End: Complemental strand, 15528239 - 15527903
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaa 182  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||    |||| |||| |||||||||||| ||||||||| ||    
T  15528239 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcacctttaacgacttaaattcatagtagaatcttaaaatagacaa 15528140  T
Q  183 aatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttgg 282  Q
    |||||||| |||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||          | ||    
T  15528139 aatccatcgatttcgattgcgattttacgatttcttataaactaagtcatttataactatataccatttataacatatatttagtattaaattttttggg 15528040  T
Q  283 taaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaat 382  Q
      |||||||| |||||  ||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||| |    
T  15528039 ggaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttccgagt 15527940  T
Q  383 ctcgattttgctattcccttccgacctgaagtaaagt 419  Q
      ||||||||||||| |||| ||||||||||||||||    
T  15527939 tccgattttgctatttcctttcgacctgaagtaaagt 15527903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 82 - 439
Target Start/End: Original strand, 23897810 - 23898166
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||  || |||||||||||||| ||||||| |||||||||| |||||||||||| |||   ||||||||||||||||| ||| |||||||||       
T  23897810 cattgttgataagatcccgacttaaatcctaaaatgcaggattttgcgactttcttcacgttcaacgactcaaatccatagtaaaattctaaaataggcg 23897909  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttg 281  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||    
T  23897910 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtattttttttttttg 23898009  T
Q  282 gtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaa 381  Q
    ||||||||||| |||||| ||||  ||||||||||||| || ||||||||||| |||||  ||||||||||||||| ||||||| || |||||||||||     
T  23898010 gtaaaatccatcgattttgattgagattttacaatttcttatatcgattctac-aaagtagttgagtaaaatccttcgattttggtttcgattttacgat 23898108  T
Q  382 tctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttgg 439  Q
    | ||||||||||| ||| | | |||||||||| ||| | ||||||||||||| |||||    
T  23898109 tgtcgattttgctcttctcattcgacctgaagcaaaatcccgattttgacaatcttgg 23898166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 82 - 439
Target Start/End: Complemental strand, 17543870 - 17543503
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    |||||||||||||||| |||||||||| ||||||| |||||||||| |||||| ||||| |||   |||||||||||||||||||||| |||||||   |    
T  17543870 cattgttgtcaaaatctcgacttaaatcctaaaattcaggattttgcgacttttttcactttcaacgactcaaatccatagtagaatcttaaaataagca 17543771  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagta----------nnn 271  Q
    ||||| ||  |||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||                 
T  17543770 aaatctatggattttgattgcgattttactatttcttataaactaagtcatttacgactatataccatttataacatatatttagtattattattttttt 17543671  T
Q  272 nnnnnngttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcg 371  Q
           |||||||||||||| |||||| ||||| |||||||||||||| | |||||||||||||||||| ||||||||||||||| |||||||||| ||    
T  17543670 tttatttttggtaaaatccatcgattttgattgcgattttacaatttccaatatcgattctacaaaagtccttgagtaaaatccttcgattttgatttcg 17543571  T
Q  372 attttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttgg 439  Q
    |||||| || || ||||||||||||||| || |||||||||||||||| || ||||| ||||||||||    
T  17543570 attttatgagtcccgattttgctattccttttcgacctgaagtaaagtcccaattttaacaaccttgg 17543503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 82 - 439
Target Start/End: Original strand, 17103201 - 17103551
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    |||||||||||||||||||||||||||  |||||| |||||||||| |||       || |||   ||||||||| ||||||||||||| |||||||| |    
T  17103201 cattgttgtcaaaatcccgacttaaatcttaaaattcaggattttgcgac-------actttcaacgactcaaatgcatagtagaatcccaaaatagaca 17103293  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttg 281  Q
    ||||||||| |||||||||  ||||||||||||||||||||||||||| ||||| ||||||||| ||||||| ||||||||||| ||          | |    
T  17103294 aaatccatcgattttgattacgattttacgatttcttataaactaagttatttacgactatatatcatttatgacatatatttattattaatttttttag 17103393  T
Q  282 gtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaa 381  Q
    ||||||||||| |||||| ||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||| | | ||||||||||||||||||     
T  17103394 gtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcggtattgattgcgattttacgag 17103493  T
Q  382 tctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttgg 439  Q
    ||  ||||||| ||||||||| |||| ||||||||||| |||||||||||||||||||    
T  17103494 tcctgattttgttattccctttcgacttgaagtaaagtcccgattttgacaaccttgg 17103551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 82 - 439
Target Start/End: Complemental strand, 11327701 - 11327335
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||||||||||||||||||||  |||||||||| | ||||| |  |||||||| ||||   |||| |||||||||||||||||| |||||||  |    
T  11327701 cattgttgtcaaaatcccgacttaaaacctaaaatccaaggttttgcggttttcttcatcttcaaggacttaaatccatagtagaatcccaaaataggca 11327602  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngtt- 280  Q
    |||| |||| ||||| |||| ||||||||| |||||||| |||||| |||||||||||| |||||||||||| |||| |||||| |           ||     
T  11327601 aaattcatcgattttaattgcgattttacgttttcttatgaactaattcatttatgactgtataccatttatcacatgtatttatttattatttatttta 11327502  T
Q  281 --------ggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcga 372  Q
            |||||||||||| ||||||  |||| |||||||||||||||| |||||||||||||||||| ||||||||||| ||| ||||||||||||||    
T  11327501 ttttttttggtaaaatccatcgattttggttgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaattcttcgattttgattgcga 11327402  T
Q  373 ttttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttgg 439  Q
    |||||||| ||||||||||||||||||||| | |||||||||||||  |||||||||||||||||||    
T  11327401 ttttacgagtctcgattttgctattccctttcaacctgaagtaaagccccgattttgacaaccttgg 11327335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 83 - 438
Target Start/End: Original strand, 17250057 - 17250412
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaa 182  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||  |||||||||||||||   |||| ||||||||| |||||||| |||||||  ||    
T  17250057 attgttgttaaaatcccgacttaaatcctaaaatccaggattttgcaactttcttcaccttcaacgacttaaatccatactagaatcccaaaataggcaa 17250156  T
Q  183 aatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttgg 282  Q
    ||| |||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||| ||          ||||    
T  17250157 aattcattgattttgattgcgattttacgatttcttataaactaagtcatttatgactatata-aatttataatatatatttattactattgttttttgg 17250255  T
Q  283 taaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcct--ttgattttgattgcgattttacga 380  Q
    ||||||||||||||||| ||||| | |||||||||| |||   ||||||||| |||| | ||||||||||||||  || |||||||||||||||||||||    
T  17250256 taaaatccattgattttgattgcgaatttacaattttctatggcgattctactaaagaccttgagtaaaatccttctttattttgattgcgattttacga 17250355  T
Q  381 atctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
     || | | || || ||| |||| |||||||||||||||| |||||||||| |||||||    
T  17250356 gtc-ccaattcgccatttcctttcgacctgaagtaaagtcccgattttgataaccttg 17250412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 82 - 437
Target Start/End: Complemental strand, 30912542 - 30912181
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    |||||||||||||||||| |||||||| |||||||  ||||||||| ||||||||||||||||   |||||||||||||| |||||||  |||||||  |    
T  30912542 cattgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccataatagaatcacaaaataggca 30912443  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttg 281  Q
    ||||||||  |||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||           ||    
T  30912442 aaatccatagattttgattgcgattttacgatttcttataaactaagtcatttatgattatatatcatttatcacatatatttagtattatttttttgtg 30912343  T
Q  282 ------gtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattt 375  Q
          ||||||||||| |||| | ||||| ||| ||  ||||| || ||||||| |||||||||  |||| ||||||||||  |||||| ||| |||||    
T  30912342 gtaaaagtaaaatccatcgattatgattgcgattctatgatttcttatatcgattttacaaaagtagttgaataaaatccttcaattttggttgagattt 30912243  T
Q  376 tacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaacctt 437  Q
    ||||| | ||||||||||||||| ||| | |||||||| ||| |||||||||||||||||||    
T  30912242 tacgattatcgattttgctattctctttcaacctgaagcaaaattccgattttgacaacctt 30912181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 82 - 438
Target Start/End: Complemental strand, 27233407 - 27233073
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||   |||| |||||||||||||||||| |||||||| |    
T  27233407 cattgttgtcaaactaccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 27233308  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttg 281  Q
    ||||||||| |||||||||| ||||||| ||||||||||                      ||||||||||||||||||||||||||           ||    
T  27233307 aaatccatcgattttgattgcgattttatgatttcttat----------------------ataccatttataacatatatttagtattattgttttatg 27233230  T
Q  282 gtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaa 381  Q
    |||||||| || |||||| ||||| |||||||||||| ||| | ||||||||| |||| | |||||||||||||||  |||||||||||||||||| ||     
T  27233229 gtaaaatctatcgattttgattgcgattttacaattttctatagcgattctactaaagaccttgagtaaaatccttcaattttgattgcgattttatgag 27233130  T
Q  382 tctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    || ||||||||  ||||||||  ||||||||||||||   |||||||||||||||||    
T  27233129 tcccgattttgtcattcccttttgacctgaagtaaaggctcgattttgacaaccttg 27233073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 217 - 439
Target Start/End: Complemental strand, 7918343 - 7918123
Alignment:
Q  217 ttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttggtaaaatccattgattttaattgctattttacaat 316  Q
    ||||||| ||||||||||||||||||||| ||||||||||||| ||||||||          |||||||||||||| |||||| ||||| ||||||||||    
T  7918343 ttataaattaagtcatttatgactatatatcatttataacataaatttagtattattttt--ttggtaaaatccatcgattttgattgcgattttacaat 7918246  T
Q  317 ttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaa 416  Q
    |||||| || ||||||||||||||| ||||||||||| ||| |||||||||||| ||||||||| ||  |||| |||||||||||| |||||||||||||    
T  7918245 ttcctatattgattctacaaaagtccttgagtaaaattcttcgattttgattgcaattttacgagtcctgattctgctattccctttcgacctgaagtaa 7918146  T
Q  417 agttccgattttgacaaccttgg 439  Q
    ||  |||||||||||||||||||    
T  7918145 agccccgattttgacaaccttgg 7918123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 281 - 438
Target Start/End: Complemental strand, 22498371 - 22498214
Alignment:
Q  281 ggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacga 380  Q
    |||||||||||| |||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||    
T  22498371 ggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtctttgagtaaaatcgttcaattttgattgcgattttacga 22498272  T
Q  381 atctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
     || | |||||||||||||||| |||||||||||||||| || |||||||||||||||    
T  22498271 gtcccaattttgctattccctttcgacctgaagtaaagtcccaattttgacaaccttg 22498214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 80 - 268
Target Start/End: Original strand, 21354745 - 21354925
Alignment:
Q  80 accattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaataga 179  Q
    |||||||||||||||||||| |||||||| ||||||||| |||        ||||||| ||||||   |||| |||||||| ||||||||| ||||||||    
T  21354745 accattgttgtcaaaatcccaacttaaatcctaaaatcctgga--------ctttctttaccttcaacgacttaaatccatggtagaatcccaaaataga 21354836  T
Q  180 aaaaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagta 268  Q
     ||||||||||  |||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21354837 caaaatccatcgttttttattgcgattttacgatttcttataaactaagtaatttatgactatataccatttataacatatatttagta 21354925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 83 - 255
Target Start/End: Complemental strand, 7918510 - 7918338
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaa 182  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| |||||| |||||||||   |||| |||||||||||| |||||||| |||   ||    
T  7918510 attgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgacttttttcaccttcaacgacttaaatccatagtaaaatcctaacataagcaa 7918411  T
Q  183 aatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataa 255  Q
    |||| ||| |||||||||| |||||| |||||| ||||||| ||||||||||||||||||||| |||||||||    
T  7918410 aatcaatcgattttgattgggattttgcgattttttataaattaagtcatttatgactatatatcatttataa 7918338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 80 - 340
Target Start/End: Complemental strand, 10509155 - 10508889
Alignment:
Q  80 accattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaataga 179  Q
    |||||| |||||||||||| ||||||||| ||||||| ||| | ||||||||||||||||| |||  ||||||||||  |||||||||||| |||||||     
T  10509155 accattattgtcaaaatccagacttaaatcctaaaattcagaaatttgtgactttcttcacattcaatgactcaaatttatagtagaatcccaaaatagg 10509056  T
Q  180 aaaaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatatac------catttataacatatatttagta-nnnn 272  Q
     ||||| |||| |||||||||  |||||||||| || |||||||||||||||||||| |||||||||      ||||||||||||||||||| ||         
T  10509055 caaaattcatcgattttgattacgattttacgacttattataaactaagtcatttat-actatatacctaagtcatttataacatatatttattattatt 10508957  T
Q  273 nnnnngttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagt 340  Q
          ||| ||||||||||  ||||| ||||| ||||||||||||| || |||||||||||||||||    
T  10508956 attattttgataaaatccatcaattttgattgcgattttacaatttcttatatcgattctacaaaagt 10508889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 91 - 254
Target Start/End: Complemental strand, 22499006 - 22498843
Alignment:
Q  91 caaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaaatccatc 190  Q
    ||||||||| ||| |||| ||||| ||||  |||||| |||||||||||||||    ||||||||||||||||| ||||  |||||||| ||||||||||    
T  22499006 caaaatcccaactaaaatcctaaattccacaattttgcgactttcttcaccttgaacgactcaaatccatagtacaatctcaaaatagacaaaatccatc 22498907  T
Q  191 aattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttata 254  Q
     ||||| ||||  ||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  22498906 gattttaattgcaattttacgatttcttataaacgaagtcatttatgactatataccatctata 22498843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 279 - 437
Target Start/End: Complemental strand, 3573833 - 3573674
Alignment:
Q  279 ttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttac 378  Q
    |||||||||  ||| |||||| ||||| ||||||||||||| || ||| ||||||||| |||  ||||||||| ||||  ||||||||||||||||||||    
T  3573833 ttggtaaaactcatcgattttgattgcgattttacaatttcttatatctattctacaagagtagttgagtaaattcctacgattttgattgcgattttac 3573734  T
Q  379 gaatctcgattttgctattccc-ttccgacctgaagtaaagttccgattttgacaacctt 437  Q
    || ||  ||||||||||||||| || |||||||||||||||| |||||||||||||||||    
T  3573733 gagtcctgattttgctattcccttttcgacctgaagtaaagtcccgattttgacaacctt 3573674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 82 - 208
Target Start/End: Complemental strand, 6943590 - 6943464
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||   |||||||||| |||||||||||  |||||||| |    
T  6943590 cattgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatcgatagtagaatctcaaaatagaca 6943491  T
Q  182 aaatccatcaattttgattgagatttt 208  Q
    |||| |||| |||||||||| ||||||    
T  6943490 aaattcatcgattttgattgcgatttt 6943464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 318 - 432
Target Start/End: Original strand, 31108390 - 31108504
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaa 417  Q
    ||||| ||| ||| |||||||||| || ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  31108390 tcctacatctattgtacaaaagtcctttagtaaaatcttttgattttgattgcggttttacgaatctcgattttgctattccctttcgacctgaagtaaa 31108489  T
Q  418 gttccgattttgaca 432  Q
    || | ||||||||||    
T  31108490 gtcctgattttgaca 31108504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 307 - 434
Target Start/End: Complemental strand, 27614561 - 27614434
Alignment:
Q  307 attttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccga 406  Q
    |||||||||||||||| || | ||||||  ||||| ||||||||||||||| ||||||||||| |||||||||| || ||||||| |||||||||| |||    
T  27614561 attttacaatttcctatattgtttctactcaagtcattgagtaaaatccttcgattttgattgtgattttacgagtcccgattttactattccctttcga 27614462  T
Q  407 cctgaagtaaagttccgattttgacaac 434  Q
    ||||||||||| | |  |||||||||||    
T  27614461 cctgaagtaaattcctaattttgacaac 27614434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 86 - 242
Target Start/End: Complemental strand, 2912373 - 2912218
Alignment:
Q  86 gttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaaat 185  Q
    |||||||||||||||||||||||  ||||||  |||||||||  ||||||| || ||||   || ||||||| ||||||||||| |||||||   |||||    
T  2912373 gttgtcaaaatcccgacttaaatcttaaaatttaggattttgcaactttctccatcttcaacgattcaaatc-atagtagaatcttaaaataagcaaaat 2912275  T
Q  186 ccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactat 242  Q
     |||| ||||||||||  |||||||||||| |||||||| |||||||||||||||||    
T  2912274 tcatcgattttgattgcaattttacgattttttataaacaaagtcatttatgactat 2912218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 318 - 438
Target Start/End: Original strand, 27890621 - 27890741
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaa 417  Q
    ||||| |||||||||||||||||| |||||||||||||||  ||||||||| ||||||||||| |  | ||||| ||| |||||| | || |||||||||    
T  27890621 tcctatatcgattctacaaaagtccttgagtaaaatccttcaattttgattacgattttacgagttccaattttactactccctttcaacttgaagtaaa 27890720  T
Q  418 gttccgattttgacaaccttg 438  Q
    ||  ||| |||||||||||||    
T  27890721 gtctcgaatttgacaaccttg 27890741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 279 - 376
Target Start/End: Complemental strand, 4841762 - 4841665
Alignment:
Q  279 ttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgatttt 376  Q
    |||||||||| ||| |||||| ||||| ||||||| ||||| ||   |||||||||||||||  ||||||||||||||||||||||||||| ||||||    
T  4841762 ttggtaaaatacatcgattttgattgcgattttacgatttcttatcccgattctacaaaagtagttgagtaaaatcctttgattttgattgtgatttt 4841665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 80 - 175
Target Start/End: Complemental strand, 18491169 - 18491074
Alignment:
Q  80 accattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaa 175  Q
    ||||||| ||||||||||||||||||||| ||||||||||| ||||||   |||| |||||||||   ||||||||||||||| ||||||| ||||    
T  18491169 accattgctgtcaaaatcccgacttaaatcctaaaatccagaattttgcatctttattcaccttcaacgactcaaatccatagcagaatcccaaaa 18491074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 5422880 - 5422798
Alignment:
Q  80 accattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatag 162  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||  ||||| |||||||||   |||||||||| ||||    
T  5422880 accattgttgtcaaaatcccgacttaaatactaaaattcatgattttgcaactttattcaccttcaacgactcaaatctatag 5422798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 282 - 413
Target Start/End: Complemental strand, 2912191 - 2912060
Alignment:
Q  282 gtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaa 381  Q
    ||||||||| | |||||| ||||| ||||||||||||| || | | |||||||||||||  |||||||||||||||  |||| ||||  ||||||||||     
T  2912191 gtaaaatccgtcgattttgattgcgattttacaatttcttataacaattctacaaaagtagttgagtaaaatccttcaatttcgattatgattttacgat 2912092  T
Q  382 tctcgattttgctattcccttccgacctgaag 413  Q
    | ||||||| ||| ||| ||| | ||||||||    
T  2912091 tatcgatttcgctcttctctttcaacctgaag 2912060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 205 - 260
Target Start/End: Complemental strand, 27614651 - 27614594
Alignment:
Q  205 ttttacgatttcttataaacta--agtcatttatgactatataccatttataacatat 260  Q
    ||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||    
T  27614651 ttttacgatttcttataaactataattcatttatgactatataccatttataacatat 27614594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 319 - 399
Target Start/End: Complemental strand, 20432486 - 20432406
Alignment:
Q  319 cctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcc 399  Q
    |||| ||||||||||||||| |  || |||||||| |||  ||||||||||||||||||||| | ||||||||||||||||    
T  20432486 cctatatcgattctacaaaactagttaagtaaaattcttcaattttgattgcgattttacgattttcgattttgctattcc 20432406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 438
Target Start/End: Original strand, 21354942 - 21355030
Alignment:
Q  350 aaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    |||||| | |||||||||||||||||||||| ||  |||||| |||||||||| | || ||||||||| | || |||||||||||||||    
T  21354942 aaatccatcgattttgattgcgattttacgagtcctgatttttctattccctttcaacttgaagtaaaatcccaattttgacaaccttg 21355030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 85 - 160
Target Start/End: Complemental strand, 3574059 - 3573984
Alignment:
Q  85 tgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccat 160  Q
    |||| ||||||| ||||||||||| ||||||||||| |||| | ||||||||||||||||   |||||||||||||    
T  3574059 tgttttcaaaattccgacttaaattctaaaatccagaatttcgcgactttcttcaccttcaacgactcaaatccat 3573984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 434
Target Start/End: Complemental strand, 33583554 - 33583444
Alignment:
Q  324 atcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgatt-ttgctattcccttccgacctgaagtaaagttcc 422  Q
    |||||||||||||||||| || |||||||| ||| ||||||||||  |||||||||| |  ||||| ||||||  ||||| ||||| |||||||| | ||    
T  33583554 atcgattctacaaaagtccttaagtaaaat-cttcgattttgattttgattttacgatttacgattattgctaacccctttcgaccggaagtaaaatccc 33583456  T
Q  423 gattttgacaac 434  Q
    ||||||||||||    
T  33583455 gattttgacaac 33583444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 18491063 - 18490998
Alignment:
Q  110 ctaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaa 175  Q
    ||||||||||| ||||||  ||||| |||||||||  |||||||||||||||| ||||||||||||    
T  18491063 ctaaaatccagcattttgcaactttattcaccttcaatgactcaaatccatagcagaatcctaaaa 18490998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 438
Target Start/End: Complemental strand, 33593044 - 33592925
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaa 417  Q
    ||||| ||| |||||||||||||  ||||||||| || || ||||| |||||| ||||||||| | || |||||| ||||||||| |||  ||||| |||    
T  33593044 tcctatatcaattctacaaaagtagttgagtaaa-tcattcgatttcgattgcaattttacgattttcaattttgttattccctttcgatatgaagcaaa 33592946  T
Q  418 gttccgattttgacaaccttg 438  Q
     | ||||||||||||| ||||    
T  33592945 atcccgattttgacaatcttg 33592925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 425
Target Start/End: Original strand, 31407569 - 31407651
Alignment:
Q  343 ttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgat 425  Q
    |||||||||||| |||||||||||||| |||||||  | | ||||||||| ||||||||| | |||| ||| ||||| |||||    
T  31407569 ttgagtaaaatcttttgattttgattgtgattttataattttcgattttgttattccctttcaacctaaagcaaagtaccgat 31407651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 327 - 376
Target Start/End: Complemental strand, 8275415 - 8275366
Alignment:
Q  327 gattctacaaaagtctttgagtaaaatcctttgattttgattgcgatttt 376  Q
    |||| |||||||||| ||||||||||||||| |||||| |||||||||||    
T  8275415 gattttacaaaagtccttgagtaaaatccttcgattttaattgcgatttt 8275366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 645417 - 645456
Alignment:
Q  227 agtcatttatgactatataccatttataacatatatttag 266  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  645417 agtcatttatgactatatgcaatttataacatatatttag 645456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 434
Target Start/End: Original strand, 23506102 - 23506193
Alignment:
Q  343 ttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaac 434  Q
    |||| |||||||||| |||||| |||| |||||||| | | ||||||||||||||| ||| |||| | ||||||| | || |||| ||||||    
T  23506102 ttgactaaaatccttcgattttaattgtgattttacaattttcgattttgctattctctttcgacttaaagtaaaatccccatttcgacaac 23506193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 266
Target Start/End: Complemental strand, 5422644 - 5422606
Alignment:
Q  228 gtcatttatgactatataccatttataacatatatttag 266  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  5422644 gtcatttatgactatatataatttataacatatatttag 5422606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 439
Target Start/End: Complemental strand, 8275372 - 8275318
Alignment:
Q  385 cgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttgg 439  Q
    |||||||||||||||||| | ||| |||| ||| |||||||||||||| ||||||    
T  8275372 cgattttgctattccctttcaaccagaagcaaaattccgattttgacagccttgg 8275318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 394
Target Start/End: Complemental strand, 18490556 - 18490522
Alignment:
Q  360 attttgattgcgattttacgaatctcgattttgct 394  Q
    ||||||||||||||||||||||| |||||||||||    
T  18490556 attttgattgcgattttacgaatttcgattttgct 18490522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 434
Target Start/End: Original strand, 1179068 - 1179177
Alignment:
Q  327 gattctacaaaagtctttgagtaaaatcctt-tgattttgattgcgattttacgaatctcgattttgctattc-ccttccgacctgaagtaaagttccga 424  Q
    ||||||||||||||  |||||||||||||||  |||||||||||||| |||| || | | ||  |||| |||| |||| | |||||||| ||| | ||||    
T  1179068 gattctacaaaagtagttgagtaaaatccttcagattttgattgcgactttaggatttttgaaattgccattcacctttcaacctgaagcaaaatcccga 1179167  T
Q  425 ttttgacaac 434  Q
    ||||||||||    
T  1179168 ttttgacaac 1179177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 10958319 - 10958266
Alignment:
Q  80 accattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactt 133  Q
    |||||||||||||||||| ||||||||||   ||||| |||||||||| |||||    
T  10958319 accattgttgtcaaaatcgcgacttaaatctcaaaattcaggattttgcgactt 10958266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 376
Target Start/End: Original strand, 20981363 - 20981412
Alignment:
Q  327 gattctacaaaagtctttgagtaaaatcctttgattttgattgcgatttt 376  Q
    |||||||||||||   ||||||||||| |||||||||||||| |||||||    
T  20981363 gattctacaaaagcagttgagtaaaattctttgattttgattacgatttt 20981412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 27890519 - 27890556
Alignment:
Q  229 tcatttatgactatataccatttataacatatatttag 266  Q
    |||||||||||||||| | |||||||||||||||||||    
T  27890519 tcatttatgactatatgcaatttataacatatatttag 27890556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 198; Significance: 1e-108; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 84 - 436
Target Start/End: Original strand, 18843716 - 18844068
Alignment:
Q  84 ttgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaa 183  Q
    ||||||| ||||| ||||||||||| ||| ||| |||||||||| ||||||||||||||||   ||||||||||||| ||||||||| |||||||| |||    
T  18843716 ttgttgttaaaattccgacttaaatcctataattcaggattttgcgactttcttcaccttcaacgactcaaatccattgtagaatcccaaaatagacaaa 18843815  T
Q  184 atccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttggt 283  Q
    || |||| ||||||||||  ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||          | |||    
T  18843816 attcatcgattttgattgcaattatacgatttcttataaactaagtcatttatgattatataccatttataacatatatttagtattaatttttttgggt 18843915  T
Q  284 aaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatc 383  Q
    ||||||||| |||||| ||||| |||||||||||||||| || ||||||||||||||| ||||||||||| ||  |||||||||||||||||||||| ||    
T  18843916 aaaatccatcgattttgattgcgattttacaatttcctatatggattctacaaaagtccttgagtaaaatactccgattttgattgcgattttacgagtc 18844015  T
Q  384 tcgattttgctattcccttccgacctgaagtaaagttccgattttgacaacct 436  Q
     |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18844016 ccgattttgctattccctttcgacctgaagtaaagttccgattttgacaacct 18844068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 83 - 438
Target Start/End: Original strand, 43234868 - 43235223
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaa 182  Q
    ||||||||||||||||| |||||||| ||||||| |||||||||| ||||||||||||||||   |||| |||||||||||||||||||||||||| |||    
T  43234868 attgttgtcaaaatcccaacttaaatcctaaaattcaggattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcctaaaataggaaa 43234967  T
Q  183 aatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttgg 282  Q
    |||||||| |||||||||| |||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||| ||| ||          ||||    
T  43234968 aatccatcgattttgattgtgattttacgatttcttatcaactaagtcatttatgtctataaaccatttataacatatacttactattattatcttttgg 43235067  T
Q  283 taaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaat 382  Q
    ||||||| || |||||| ||||| ||||||||||||  || |||||||||||||||||  ||||||||||||||| ||||||||||||||||||| || |    
T  43235068 taaaatcaatcgattttgattgcgattttacaattttttatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattttatgagt 43235167  T
Q  383 ctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
       ||||||||||||||||| || |  |||||||||| || |||||||||||||||    
T  43235168 actgattttgctattccctttcgtctcgaagtaaagtcccaattttgacaaccttg 43235223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 82 - 438
Target Start/End: Complemental strand, 18051660 - 18051307
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||||||||||||||||||||| |||||||  ||||||||| ||||||||||| ||||   |||||||||| |||||||||| |||||||||  |    
T  18051660 cattgttgtcaaaatcccgacttaaatcctaaaatataggattttgcgactttcttcaacttcaacgactcaaatctatagtagaattctaaaataggca 18051561  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttg 281  Q
    ||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||          |||    
T  18051560 aaatccatcgattttgattgcgattgtacgatttcttataaactaagtcatttatgac-atata--atttataacatatatttagtattattattttttg 18051464  T
Q  282 gtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaa 381  Q
    || |||||||| ||||||  |||| |||||||||||||||| |||||||||||||||||| || | |||||| |||||||||||||||||||| ||| |     
T  18051463 gttaaatccatcgattttgcttgcgattttacaatttcctatatcgattctacaaaagtccttcaataaaattctttgattttgattgcgattctacaag 18051364  T
Q  382 tctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    || ||||||| |||||||||| |||||| ||||||| | ||||||||||| ||||||    
T  18051363 tcccgatttttctattccctttcgacctaaagtaaaatcccgattttgactaccttg 18051307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 82 - 438
Target Start/End: Original strand, 19578941 - 19579299
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||||||||| || ||||||||  ||||||||||||||||| || |||||||||||||   |||| |||||||||||||||||| ||||||   |    
T  19578941 cattgttgtcaaaattccaacttaaatcataaaatccaggattttgcgattttcttcaccttcaacgacttaaatccatagtagaatcccaaaataagca 19579040  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagta-nnnnnnnnngtt 280  Q
    ||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||           ||    
T  19579041 aaatccatcgattttgattgcgactttacgatttcttataaactaagtcatttatgactatttaccattcataacatatatttggtattatttttttttt 19579140  T
Q  281 ggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacga 380  Q
    |||||||||||| |||||| ||||| |||||||||||| ||| | |||||||||||||||| |||||| |||||||| ||||||||||||||||||| ||    
T  19579141 ggtaaaatccatcgattttgattgcgattttacaattttctataacgattctacaaaagtccttgagtgaaatccttcgattttgattgcgattttatga 19579240  T
Q  381 atctcgattttgc-tattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
     || | ||||||| || |||||| |||||||||||||| | ||||||||||| ||||||    
T  19579241 gtcccaattttgcttactccctttcgacctgaagtaaaatcccgattttgactaccttg 19579299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 84 - 438
Target Start/End: Complemental strand, 23172560 - 23172218
Alignment:
Q  84 ttgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaa 183  Q
    ||||||||||||||||||||||||| |||||||  ||||||||| ||||||||||| ||||   |||| |||||||||||||||||| |||||||| |||    
T  23172560 ttgttgtcaaaatcccgacttaaatcctaaaatttaggattttgcgactttcttcatcttcaacgacttaaatccatagtagaatcccaaaatagacaaa 23172461  T
Q  184 ----atccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngt 279  Q
        ||| ||| |||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||          |    
T  23172460 attcatcgatcgattttgatcgcgattttacgattttttataaactaagtcatttatgactatataccatttgtaacatatatttaatattaattttttt 23172361  T
Q  280 tggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacg 379  Q
     |||||||| ||| |||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||| |||           
T  23172360 gggtaaaattcatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtctttgagtaaaattcttcgattttgattacga------- 23172268  T
Q  380 aatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
             |||||||||||||| | |||||||||||||||||||||||||||||||||    
T  23172267 ---------tttgctattccctttcaacctgaagtaaagttccgattttgacaaccttg 23172218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 94 - 437
Target Start/End: Complemental strand, 41688782 - 41688441
Alignment:
Q  94 aatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaaatccatcaat 193  Q
    |||||| |||||||| ||||||| | ||||||||  | |||||||||||||   |||| ||||  |||||| ||| ||||||||   ||||| |||| ||    
T  41688782 aatcccaacttaaatcctaaaattc-ggattttgcaattttcttcaccttcaacgacttaaatttatagtaaaattctaaaataagcaaaattcatcgat 41688684  T
Q  194 tttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttggtaaaatccatt 293  Q
    |||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||          |||||||||| |||     
T  41688683 tttgattgcgattttacgatttcttataaactaaatcatttataactatataccattcataacatatatttagtattatttttt-ttggtaaaattcatc 41688585  T
Q  294 gattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgc 393  Q
    |||||| ||||| |||||||||||| ||| |||||||||||||||||| || |||||||||||| ||||||| ||||||||||| || || |||||||||    
T  41688584 gattttgattgcgattttacaattttctatatcgattctacaaaagtccttaagtaaaatccttcgattttggttgcgattttaggagtcccgattttgc 41688485  T
Q  394 tattcccttccgacctgaagtaaagttccgattttgacaacctt 437  Q
    ||||||||| || ||| ||||||||| |||||||||||||||||    
T  41688484 tattccctttcgtcctaaagtaaagtcccgattttgacaacctt 41688441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 91 - 437
Target Start/End: Complemental strand, 27340307 - 27339962
Alignment:
Q  91 caaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaaatccatc 190  Q
    ||||||||||||||||||  ||||||  | ||||||| ||||||||||| ||||   |||||||||| ||||||||||| ||||||||  ||||| ||||    
T  27340307 caaaatcccgacttaaatcataaaatttatgattttgcgactttcttcatcttcaacgactcaaatctatagtagaatcttaaaataggcaaaattcatc 27340208  T
Q  191 aattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttag---tannnnnnnnngttggtaaaa 287  Q
     ||||||||||||||||||  ||||||||||||||||||||||    |||||||||||||| ||||||||||||||   ||          || ||||||    
T  27340207 gattttgattgagattttaatatttcttataaactaagtcatt----actatataccatttgtaacatatatttagtattattattatttttttgtaaaa 27340112  T
Q  288 tccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcga 387  Q
    || || |||||| ||||| ||||||  ||||| || ||| ||||||||||||||  |||||||||||||| ||||||||||||||||| |||| | ||||    
T  27340111 tctatcgattttgattgcgattttaatatttcttatatcaattctacaaaagtccgtgagtaaaatccttcgattttgattgcgatttcacgattttcga 27340012  T
Q  388 ttttgctattcccttccgacctgaagtaaagttccgattttgacaacctt 437  Q
    ||||||||||||||| | || |||||||||||||||||||||||||||||    
T  27340011 ttttgctattccctttcaacttgaagtaaagttccgattttgacaacctt 27339962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 132 - 437
Target Start/End: Original strand, 20320992 - 20321297
Alignment:
Q  132 tttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaaatccatcaattttgattgagattttacgatttcttataaactaagtca 231  Q
    |||||||||||||  ||||| |||||||||||| ||| | |||||||| ||||| |||||| |||||||| |||||||||||| ||||||||||||||||    
T  20320992 tttcttcaccttcaatgactaaaatccatagtaaaattccaaaatagataaaattcatcaactttgattgcgattttacgatt-cttataaactaagtca 20321090  T
Q  232 tttatgactatataccatttataacatatatttagtannnnnnnnngttgg-taaaatccattgattttaattgctattttacaatttcctagatcgatt 330  Q
    |||||||| ||||| ||||||||||||||||||| ||           ||| |||||||||| |||||| ||||| |||||||||||||||| || ||||    
T  20321091 tttatgaccatatatcatttataacatatatttaatattaattttttctgggtaaaatccatcgattttgattgcgattttacaatttcctatatagatt 20321190  T
Q  331 ctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttga 430  Q
    ||||||||||| || ||||||||||||  |||||||||||||||||| || || ||||||| ||||||| ||  ||||||||||||||| || |||||||    
T  20321191 ctacaaaagtccttcagtaaaatccttcaattttgattgcgattttatgagtcccgattttactattcctttttgacctgaagtaaagtcccaattttga 20321290  T
Q  431 caacctt 437  Q
    |||||||    
T  20321291 caacctt 20321297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 80 - 390
Target Start/End: Complemental strand, 21059287 - 21058978
Alignment:
Q  80 accattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaataga 179  Q
    |||||||||||||||||||||| |||||| |||||||| ||||||||| |||||||||||| |||   ||||||||||||| |||||||||  ||||||     
T  21059287 accattgttgtcaaaatcccgatttaaatcctaaaatctaggattttgcgactttcttcactttcaacgactcaaatccat-gtagaatccctaaatagg 21059189  T
Q  180 aaaaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngt 279  Q
     ||||| |||| |||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||         ||    
T  21059188 caaaattcatcgattttgattgcgattttacgatttcttataaacgaagtcatttatgactataaaccatttataacatatatttagtatttttttttgt 21059089  T
Q  280 tggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagt-aaaatcctttgattttgattgcgattttac 378  Q
    | ||||||||||| |||||| ||||| |||||| |||||| || ||  |||||||||||||  || ||| |||||| || ||||||| ||||||||||||    
T  21059088 t-gtaaaatccatcgattttgattgcgattttataatttcttatataaattctacaaaagtagttaagtaaaaatctttcgattttggttgcgattttac 21058990  T
Q  379 gaatctcgattt 390  Q
    || | |||||||    
T  21058989 gattgtcgattt 21058978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 81 - 438
Target Start/End: Complemental strand, 22645850 - 22645501
Alignment:
Q  81 ccattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaa 180  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||   || | |||||||||||| ||||| ||||||       
T  22645850 ccattgttgtcaaaatcccgacttaaatcctaaaatccagtattttgcgactttcttcaccttcaacgatttaaatccatagtaaaatcccaaaataagt 22645751  T
Q  181 aaaatccatcaattttgattgagattttacgatttcttataaactaa-gtcatttatgactatataccatttataacatatatttagt-annnnnnnnng 278  Q
    ||| |||||| |||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||    ||||||||| ||||||                
T  22645750 aaattccatctattttgattgcgattttacaatttcttataaactaatgtcatttatgactatatacc----ataacatatgtttagtcttgtttttttt 22645655  T
Q  279 ttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttac 378  Q
    |||||||||| ||| |||||| ||||  |||||||||||||||| ||      |  | ||||||||||||||||||||| |||||||||||| |||||||    
T  22645654 ttggtaaaattcatcgattttgattgtgattttacaatttcctatat------tgtagaagtctttgagtaaaatccttcgattttgattgcaattttac 22645561  T
Q  379 gaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    || |||| ||||||||||||||||  |||| ||||||||||||||| |||||||||||||    
T  22645560 gagtctcaattttgctattccctttagaccagaagtaaagttccgactttgacaaccttg 22645501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 83 - 375
Target Start/End: Complemental strand, 38158383 - 38158101
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaa 182  Q
    |||||||||||||| ||||||||||| |||||||| ||||||||| ||||||||| || |||    ||||||||||| |||||||||| |||||||| ||    
T  38158383 attgttgtcaaaattccgacttaaatcctaaaatctaggattttgcgactttcttgactttcaacaactcaaatccagagtagaatcccaaaatagacaa 38158284  T
Q  183 aatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttgg 282  Q
    |||||||  |||||| |||  |||||||||||||||||||||||| |||||||||||||         ||||||||||||||||||          ||||    
T  38158283 aatccattgattttggttgttattttacgatttcttataaactaaatcatttatgacta---------tataacatatatttagtattatttttt-ttgg 38158194  T
Q  283 taaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattt 375  Q
    ||||||||||  ||||| ||||  ||||||||||||| || || |||||||||||| |  ||||||||||||||| ||||||| |||||||||    
T  38158193 taaaatccatcaattttgattgtgattttacaatttcttacatagattctacaaaaatagttgagtaaaatccttcgattttggttgcgattt 38158101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 148 - 265
Target Start/End: Original strand, 19979664 - 19979781
Alignment:
Q  148 gactcaaatccatagtagaatcctaaaatagaaaaaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatatacc 247  Q
    ||||||||| ||| ||||||||| |||| |   |||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19979664 gactcaaattcatggtagaatcccaaaacacgcaaaatccatggattttgattgcgattttacgatttcttataaactaagtcatttatgactatatacc 19979763  T
Q  248 atttataacatatattta 265  Q
    ||||||||||||||||||    
T  19979764 atttataacatatattta 19979781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 83 - 208
Target Start/End: Original strand, 20923718 - 20923843
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaa 182  Q
    |||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||   |||  ||||||||||||||||||||||||||  ||    
T  20923718 attgttgtcaaaatcccgacttaaatcctaaaatccagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaatcctaaaataggcaa 20923817  T
Q  183 aatccatcaattttgattgagatttt 208  Q
    | |||||| |||||||||| ||||||    
T  20923818 agtccatcgattttgattgcgatttt 20923843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 318 - 438
Target Start/End: Original strand, 41427654 - 41427774
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaa 417  Q
    ||||| |||||||||||||||||| | ||||||||||||| |||||||||||||||||||||| || ||||||||||| |||||| ||||  ||||||||    
T  41427654 tcctatatcgattctacaaaagtcctcgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctactccctttcgactcgaagtaaa 41427753  T
Q  418 gttccgattttgacaaccttg 438  Q
    ||  |||||||||||||||||    
T  41427754 gtctcgattttgacaaccttg 41427774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 328 - 437
Target Start/End: Complemental strand, 15051981 - 15051872
Alignment:
Q  328 attctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattt 427  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||| || ||||||||||| ||| || |||| ||||||||||| |||||||    
T  15051981 attctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctactccttttcgacttgaagtaaagtcccgattt 15051882  T
Q  428 tgacaacctt 437  Q
    ||| ||||||    
T  15051881 tgataacctt 15051872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 279 - 437
Target Start/End: Complemental strand, 43005792 - 43005634
Alignment:
Q  279 ttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttac 378  Q
    |||||| ||||||| |||||||||||| ||||||| |||||||| ||||||||||||||||   |||||||||||| ||  |||||||||||||||||||    
T  43005792 ttggtacaatccatcgattttaattgcgattttacgatttcctatatcgattctacaaaagaagttgagtaaaatctttcaattttgattgcgattttac 43005693  T
Q  379 gaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaacctt 437  Q
     | | |||| ||| ||||| |||| ||| || ||| ||| | |||||||||||||||||    
T  43005692 aattttcgaattttctatttcctttcgatctaaagcaaaatcccgattttgacaacctt 43005634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 182 - 434
Target Start/End: Complemental strand, 19042448 - 19042206
Alignment:
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttg 281  Q
    ||||| ||| |||||||||| |||||||||||||||||||||| |         ||||||||||| |||| ||||||||||||||||          | |    
T  19042448 aaatctatcgattttgattgcgattttacgatttcttataaacga---------tgactatatacaatttctaacatatatttagtattaatctttttgg 19042358  T
Q  282 gtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaa 381  Q
     ||||||||||  |||| | |||| |||||||||||||||| |||||||||||||||||| || |||||||| ||| |||||| |||| ||||||||||     
T  19042357 ataaaatccatcaatttga-ttgcgattttacaatttcctatatcgattctacaaaagtccttaagtaaaattcttcgattttaattgtgattttacgag 19042259  T
Q  382 tctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaac 434  Q
    || | ||||||||||| |||| ||||||  || ||||| | ||| ||||||||    
T  19042258 tccctattttgctatttcctttcgacctagagcaaagtcctgatattgacaac 19042206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 324 - 437
Target Start/End: Original strand, 19377844 - 19377957
Alignment:
Q  324 atcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccg 423  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||  | ||||||| ||||||||||||||||||||| | || | ||||||||| | |    
T  19377844 atcgattctacaaaagtccttgagtaaaatccttcgattttgattgtaaatttacgattctcgattttgctattccctttccacttaaagtaaagtactg 19377943  T
Q  424 attttgacaacctt 437  Q
    | ||||||||||||    
T  19377944 actttgacaacctt 19377957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 361 - 439
Target Start/End: Complemental strand, 6852417 - 6852339
Alignment:
Q  361 ttttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttgg 439  Q
    |||||||||| |||||| || || |||||||||||||||||| ||||||||||| |||| |||||||||||||||||||    
T  6852417 ttttgattgcaattttatgagtcccgattttgctattccctttcgacctgaagtgaagtcccgattttgacaaccttgg 6852339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 327 - 409
Target Start/End: Original strand, 24648253 - 24648335
Alignment:
Q  327 gattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacct 409  Q
    ||||||||||||||  |||||||||||||||||||||||||| ||||||||||| | |||||||| || ||||||| ||||||    
T  24648253 gattctacaaaagtagttgagtaaaatcctttgattttgattacgattttacgattttcgattttactcttccctttcgacct 24648335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 19042516 - 19042444
Alignment:
Q  85 tgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatc 157  Q
    ||||||||||||||| |||||||| |||||||  | ||||||||||||||||||||||||   ||||||||||    
T  19042516 tgttgtcaaaatcccaacttaaattctaaaatttaagattttgtgactttcttcaccttcaacgactcaaatc 19042444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 415
Target Start/End: Complemental strand, 22984695 - 22984594
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcg----attttacgaatctcgattttgctattcccttccgacctgaag 413  Q
    ||||| ||||||||||||||| || ||||||||||||||| ||||||||||||     ||||||||| |  ||||||||||||||| || | ||||||||    
T  22984695 tcctatatcgattctacaaaattccttgagtaaaatccttcgattttgattgcatgcaattttacgatttacgattttgctattccttttcaacctgaag 22984596  T
Q  414 ta 415  Q
    ||    
T  22984595 ta 22984594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 437
Target Start/End: Original strand, 26021464 - 26021665
Alignment:
Q  227 agtcatttatgactatataccatttataacatatatttagta-nnnnnnnnngttggtaaaatccattgattttaattgctattttacaatttcctagat 325  Q
    |||||||||||||||||||| ||||||||||||||||||| |           |||||||||| ||| |  ||||||||  ||||||| ||||| || ||    
T  26021464 agtcatttatgactatatacaatttataacatatatttagcattattattgttttggtaaaatgcatcg--tttaattgtgattttacgatttcttatat 26021561  T
Q  326 cgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgat 425  Q
    ||||  |||| ||||  ||||||||||||||  ||||||||||| |||||        ||||||||||| |||||||  | ||||||| ||| | |||||    
T  26021562 cgatgttacacaagtagttgagtaaaatcctacgattttgattgtgattt--------tcgattttgctcttcccttttggcctgaagcaaaatcccgat 26021653  T
Q  426 tttgacaacctt 437  Q
    ||||||||||||    
T  26021654 tttgacaacctt 26021665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 380
Target Start/End: Original strand, 17624851 - 17624898
Alignment:
Q  333 acaaaagtctttgagtaaaatcctttgattttgattgcgattttacga 380  Q
    ||||||||  |||||||||||| |||||||||||||||||||||||||    
T  17624851 acaaaagtagttgagtaaaatcttttgattttgattgcgattttacga 17624898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 318 - 438
Target Start/End: Complemental strand, 13341591 - 13341471
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatct-cgattttgctattcccttccgacctgaagtaa 416  Q
    ||||| |||||||||||||||||  | ||||||| |||||  |||| | |||||||||||||| | | | ||||| |||||||||| |||  ||||| ||    
T  13341591 tcctatatcgattctacaaaagtagtcgagtaaa-tccttcaatttcgtttgcgattttacgatttttcaatttttctattccctttcgatttgaagcaa 13341493  T
Q  417 agttccgattttgacaaccttg 438  Q
    | | ||||||||||||||||||    
T  13341492 aatcccgattttgacaaccttg 13341471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 19377742 - 19377782
Alignment:
Q  225 taagtcatttatgactatataccatttataacatatattta 265  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  19377742 taagtcatttatgactatatccaatttataacatatattta 19377782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 24648160 - 24648199
Alignment:
Q  227 agtcatttatgactatataccatttataacatatatttag 266  Q
    |||||||||||||||||||| |||||||| ||||||||||    
T  24648160 agtcatttatgactatatacaatttataatatatatttag 24648199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 396
Target Start/End: Original strand, 15446410 - 15446447
Alignment:
Q  359 gattttgattgcgattttacgaatctcgattttgctat 396  Q
    |||||||||||||||||||||| | |||||||||||||    
T  15446410 gattttgattgcgattttacgagtttcgattttgctat 15446447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 41427548 - 41427588
Alignment:
Q  225 taagtcatttatgactatataccatttataacatatattta 265  Q
    |||||||||||||||||||| | |||||||| |||||||||    
T  41427548 taagtcatttatgactatatgcaatttataatatatattta 41427588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 191; Significance: 1e-103; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 82 - 438
Target Start/End: Complemental strand, 31238107 - 31237750
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||  |||||||||||||||   ||||||||| |||||||||||| |||||||| ||    
T  31238107 cattgttgtcaaaatcccgacttaaatcctaaaatctaggattttgccactttcttcaccttcaacgactcaaattcatagtagaatcttaaaataggaa 31238008  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatattta-gtannnnnnnnngtt 280  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||          ||    
T  31238007 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgattatataccatttataacatatattcatgtattattatttttt 31237908  T
Q  281 ggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacga 380  Q
    |||||||||||| |||||| ||||| |||||||||||| ||| ||||||| |||||||||| ||||||||||||||| ||| ||||||||||||||||||    
T  31237907 ggtaaaatccatcgattttgattgcaattttacaattttctatatcgattttacaaaagtccttgagtaaaatccttcgatattgattgcgattttacga 31237808  T
Q  381 atctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
     || ||||||| ||||||||||  || |||||||||||| | ||||||||||| ||||    
T  31237807 gtcccgattttactattcccttttgaactgaagtaaagtcctgattttgacaatcttg 31237750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 82 - 437
Target Start/End: Original strand, 1404782 - 1405137
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||   |||| |||||||| ||||||||||||| ||   |    
T  1404782 cattgttgtcaaaatcccgacttaaattctaaaatttaggattttgtgactttcttcaccttcaacgacttaaatccattgtagaatcctaaactatgca 1404881  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttg 281  Q
    ||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||| |          ||     
T  1404882 aaatccatcgattttgattgtgattttacgatttcttatatactaagtcatttatgactatacaccatttataacatatacttaggaatattattatttt 1404981  T
Q  282 gtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaa 381  Q
     | |||||||| |||||| ||||| |||||||||||||||| |||||||||||||||||  ||||||||||||||| ||||||||||||||||||| ||     
T  1404982 tttaaatccatcgattttgattgcaattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattttatgag 1405081  T
Q  382 tctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaacctt 437  Q
    |  ||||||||||||||||||  ||||| || ||||||  ||||||||||||||||    
T  1405082 taccgattttgctattcccttttgacctaaattaaagtctcgattttgacaacctt 1405137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 82 - 439
Target Start/End: Original strand, 20063713 - 20064079
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||||||||||||||||||||  |||||||||| | ||||| |  |||||||| ||||   |||| |||||||||||||||||| |||||||  |    
T  20063713 cattgttgtcaaaatcccgacttaaaacctaaaatccaaggttttgcggttttcttcatcttcaaggacttaaatccatagtagaatcccaaaataggca 20063812  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngtt- 280  Q
    |||| |||| ||||| |||| ||||||||| |||||||| |||||| |||||||||||| |||||||||||| |||| |||||| |           ||     
T  20063813 aaattcatcgattttaattgcgattttacgttttcttatgaactaattcatttatgactgtataccatttatcacatgtatttatttattatttatttta 20063912  T
Q  281 --------ggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcga 372  Q
            |||||||||||| ||||||  |||| |||||||||||||||| |||||||||||||||||| ||||||||||| ||| ||||||||||||||    
T  20063913 ttttttttggtaaaatccatcgattttggttgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaattcttcgattttgattgcga 20064012  T
Q  373 ttttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttgg 439  Q
    |||||||| ||||||||||||||||||||| | |||||||||||||  |||||||||||||||||||    
T  20064013 ttttacgagtctcgattttgctattccctttcaacctgaagtaaagccccgattttgacaaccttgg 20064079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 84 - 411
Target Start/End: Complemental strand, 35566082 - 35565755
Alignment:
Q  84 ttgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaa 183  Q
    |||||||||||||||| ||||||||   ||||| |||||||||| |||||||||||  |||  |||||||||||||| ||||||||| |||||||  |||    
T  35566082 ttgttgtcaaaatcccaacttaaatcacaaaattcaggattttgcgactttcttcatattcaatgactcaaatccatggtagaatcccaaaataggcaaa 35565983  T
Q  184 atccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttggt 283  Q
    ||||||| ||||||||||   |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||          |||||    
T  35565982 atccatcgattttgattgcagttttacgatttcttataaacaaagtcatttatgactatatacaatttataacatatatttagtattttttt---ttggt 35565886  T
Q  284 aaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgag---taaaatcctttgattttgattgcgattttacga 380  Q
    ||||||||| |||||| ||||  ||||||  ||||| || |||||||||||||||||  |||||   |||||||||| ||||||  |||||||||||| |    
T  35565885 aaaatccatcgattttgattgtgattttatgatttcttatatcgattctacaaaagtagttgagtaataaaatccttcgattttagttgcgattttacaa 35565786  T
Q  381 atctcgattttgctattcccttccgacctga 411  Q
     | ||||||||||| ||| | | ||||||||    
T  35565785 ttatcgattttgctcttctccttcgacctga 35565755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 82 - 380
Target Start/End: Original strand, 36429847 - 36430145
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    |||||||||||||||||| |||||||| ||| |||| ||||||||| ||||||||||||||||   ||||||| | ||||| ||||||  |||||||  |    
T  36429847 cattgttgtcaaaatcccaacttaaatcctataatctaggattttgcgactttcttcaccttcaacgactcaagttcataggagaatctcaaaataggca 36429946  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttg 281  Q
    ||||||||| |||||||||| |||| |||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||          | |    
T  36429947 aaatccatcgattttgattgcgattgtacgatttcttataaactaagtaatttatgactatatatcatttctaacatatatttagtatttttttttttag 36430046  T
Q  282 gtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacga 380  Q
    ||||||||||| |||||| ||||| ||||||   |||  |  ||||||||||||||| |  |||||||| |||||| ||||||||||||||||||||||    
T  36430047 gtaaaatccatcgattttgattgcaattttaattttttttttatcgattctacaaaaattattgagtaatatccttcgattttgattgcgattttacga 36430145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 82 - 413
Target Start/End: Complemental strand, 15588979 - 15588654
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||| ||||||||||||||||||| |  |||||| |||||||||| | ||||||||||||||    |||||||| ||||||||||||  |||||||| |    
T  15588979 cattgctgtcaaaatcccgacttaa-tcttaaaattcaggattttgcgtctttcttcaccttcaacaactcaaatacatagtagaatctcaaaatagaca 15588881  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttg 281  Q
    ||||| |||  |||| |||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||  |||||||||||||          |||    
T  15588880 aaatcaatcgttttttattgcgattttacgatttcatataaactaagtcatttatgattatataccatttat--catatatttagtattattttt--ttg 15588785  T
Q  282 gtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaa 381  Q
    ||||||||||| |||||| ||||| |||||| |||||| || |||||| ||||  ||||  ||||||||||||||| ||||||| ||||||||||| ||     
T  15588784 gtaaaatccatcgattttgattgcgattttataatttcttatatcgatcctac-gaagtaattgagtaaaatccttcgattttggttgcgattttatgat 15588686  T
Q  382 tctcgattttgctattcccttccgacctgaag 413  Q
    | |||||||| || ||| ||| ||||||||||    
T  15588685 tgtcgatttttcttttctctttcgacctgaag 15588654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 82 - 257
Target Start/End: Original strand, 30432418 - 30432593
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||||||||||| || |||||| |||||||| ||||||||  |||||||||| |||||   ||||||||||||||||||||||  |||||||| |    
T  30432418 cattgttgtcaaaatcctgatttaaattctaaaatctaggatttttcgactttcttcgccttcaacgactcaaatccatagtagaatctcaaaatagaca 30432517  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataaca 257  Q
    ||||||||| ||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  30432518 aaatccatcgattttgattgcaattttacgatttcttataaactaagtcatttattactatataccatttataaca 30432593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 85 - 268
Target Start/End: Original strand, 31578007 - 31578189
Alignment:
Q  85 tgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaaa 184  Q
    ||||||||||||||||||||||||  ||||||  | ||||||| || |||||||||||||   || | |||||| ||||||||||||||||||   ||||    
T  31578007 tgttgtcaaaatcccgacttaaatgttaaaatttaagattttgcgattttcttcaccttcaacgatttaaatcc-tagtagaatcctaaaataagcaaaa 31578105  T
Q  185 tccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagta 268  Q
    |||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31578106 tccatcaattttgattgcaattttacgatttattataaactaagtcatttatgactatataccatttataacatatatttagta 31578189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 243 - 438
Target Start/End: Complemental strand, 19262285 - 19262090
Alignment:
Q  243 ataccatttataacatatatttagtannnnnnnnngttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtct 342  Q
    ||||||||||||||||||| ||||||          |||||||| ||| | |||||| ||||| ||||||||||||| || ||||||||||||||||||     
T  19262285 ataccatttataacatatagttagtattattattttttggtaaagtccgtcgattttgattgcgattttacaatttcttatatcgattctacaaaagtcc 19262186  T
Q  343 ttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    |||||||||||| || |||||||||||||||||||||| || |||||||||||||||| | |||| ||||||||||||||||||| ||||||||||    
T  19262185 ttgagtaaaatctttcgattttgattgcgattttacgagtcccgattttgctattcccattcgacttgaagtaaagttccgatttcgacaaccttg 19262090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 220 - 437
Target Start/End: Complemental strand, 25539138 - 25538920
Alignment:
Q  220 taaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngtt-ggtaaaatccattgattttaattgctattttacaattt 318  Q
    |||||| |||||||||||||||||||| || |||||||||||||||| |          || ||||||||| || |||||| ||||| ||||||||||||    
T  25539138 taaactgagtcatttatgactatatacaatatataacatatatttagcattatttctgttttggtaaaatctatcgattttgattgcaattttacaattt 25539039  T
Q  319 cctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaag 418  Q
      || |||||||||||||||||  || ||||||||||||| |||||||||||||||||||||  | ||||||| |||||||||| |||||||| ||||||    
T  25539038 tttatatcgattctacaaaagtagttcagtaaaatcctttaattttgattgcgattttacgagacccgatttttctattccctttcgacctgatgtaaag 25538939  T
Q  419 ttccgattttgacaacctt 437  Q
    | |||||||||||||||||    
T  25538938 taccgattttgacaacctt 25538920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 281 - 437
Target Start/End: Original strand, 30433013 - 30433169
Alignment:
Q  281 ggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacga 380  Q
    ||||||||||||  ||||| ||||| |||||||||||||||| |||||||||| ||||||| |||||||||||| || ||||||||||||||||||| ||    
T  30433013 ggtaaaatccatctattttgattgcgattttacaatttcctatatcgattctataaaagtccttgagtaaaatcattcgattttgattgcgattttatga 30433112  T
Q  381 atctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaacctt 437  Q
     || ||||||| ||||| | || ||||||||||||| || |||||||||||||||||    
T  30433113 gtcccgatttttctattgcttttcgacctgaagtaatgtcccgattttgacaacctt 30433169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 324 - 439
Target Start/End: Complemental strand, 20034110 - 20033995
Alignment:
Q  324 atcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccg 423  Q
    |||||||||||||||||| |||||||||||||||  ||||||||||||||||||||| |||||||||||||| |||||| |||| ||||||||||| |||    
T  20034110 atcgattctacaaaagtccttgagtaaaatccttcaattttgattgcgattttacgagtctcgattttgctactccctttcgacttgaagtaaagtcccg 20034011  T
Q  424 attttgacaaccttgg 439  Q
    ||||||| ||| ||||    
T  20034010 attttgataactttgg 20033995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 318 - 427
Target Start/End: Complemental strand, 27523990 - 27523881
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaa 417  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| || ||||||||||| |||||| |||| |||||||||    
T  27523990 tcctacatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctactccctttcgacttgaagtaaa 27523891  T
Q  418 gttccgattt 427  Q
    || |||||||    
T  27523890 gtcccgattt 27523881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 318 - 440
Target Start/End: Original strand, 974573 - 974696
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatct-cgattttgctattcccttccgacctgaagtaa 416  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| | | ||||||||||| |||||| |||| ||||||||    
T  974573 tcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtttccgattttgctactccctttcgacttgaagtaa 974672  T
Q  417 agttccgattttgacaaccttggg 440  Q
    ||| ||||| |||| |||||||||    
T  974673 agtcccgatattgataaccttggg 974696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 324 - 438
Target Start/End: Complemental strand, 21869209 - 21869095
Alignment:
Q  324 atcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccg 423  Q
    |||||||||||||||||| |||| |||||||||| |||||| |||||||||||| || || ||||||| |||||||||| |||| ||||||||||| |||    
T  21869209 atcgattctacaaaagtcattgaataaaatccttcgattttaattgcgattttaagagtcccgatttttctattccctttcgacttgaagtaaagtcccg 21869110  T
Q  424 attttgacaaccttg 438  Q
    |||||||| ||||||    
T  21869109 attttgacgaccttg 21869095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 82 - 212
Target Start/End: Complemental strand, 23863451 - 23863321
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||||||||||||||||||||| |||||||| || |||||| |||||||||||| |||   |||| |||||||||||||||||  |||||||  |    
T  23863451 cattgttgtcaaaatcccgacttaaattctaaaatcgagaattttgcgactttcttcactttcaacgactgaaatccatagtagaatctcaaaataggca 23863352  T
Q  182 aaatccatcaattttgattgagattttacga 212  Q
    ||||||||| |||||| ||| ||||||||||    
T  23863351 aaatccatcgattttggttgcgattttacga 23863321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 318 - 438
Target Start/End: Original strand, 19245824 - 19245944
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaa 417  Q
    ||||| |||||||||||||||||  || |||||||||||| |||||||||||||||||||||| | | ||||||||||||||||| | || ||||| |||    
T  19245824 tcctatatcgattctacaaaagtagttaagtaaaatccttagattttgattgcgattttacgatttttgattttgctattccctttcaacttgaagcaaa 19245923  T
Q  418 gttccgattttgacaaccttg 438  Q
     | ||||||||||||||||||    
T  19245924 atcccgattttgacaaccttg 19245944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 192 - 374
Target Start/End: Complemental strand, 1690748 - 1690566
Alignment:
Q  192 attttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttggtaaaatcca 291  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||          ||||||||||  |    
T  1690748 attttgattgcgattttacgatttcttataaactaagtcttttatgactatataccatttataaaatatatttaatattattattttttggtaaaattta 1690649  T
Q  292 ttgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgatt 374  Q
    | |||||| ||||| ||||||| | ||| || |||||||  ||||||||  || |||||| ||||| | ||||| ||||||||    
T  1690648 tcgattttgattgcgattttacgaattcttatatcgatttaacaaaagtagttcagtaaattccttcgcttttggttgcgatt 1690566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 324 - 439
Target Start/End: Original strand, 7302023 - 7302138
Alignment:
Q  324 atcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccg 423  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||| || |||||||||||  ||| | | || ||||||||||| |||    
T  7302023 atcgattctacaaaagtccttgagtaaaatccttcgattttgattgcaattttacgagtcccgattttgctaccccccttcaacttgaagtaaagtcccg 7302122  T
Q  424 attttgacaaccttgg 439  Q
    ||||||| ||||||||    
T  7302123 attttgataaccttgg 7302138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 220 - 437
Target Start/End: Original strand, 16766922 - 16767140
Alignment:
Q  220 taaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttggtaaaatccattgattttaattgctattttacaatttc 319  Q
    |||||| |||||||||||||| ||||| |||||||||| |||||||| |          || |  |||||| |||||||| ||||| ||||||| |||||    
T  16766922 taaactgagtcatttatgactgtatacaatttataacaaatatttagcattatttttgttttggtaaatcctttgattttgattgcgattttacgatttc 16767021  T
Q  320 ctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacga-atctcgattttgctattcccttccgacctgaagtaaag 418  Q
     || |||||||||| ||||||  |||||||||||||||  |||||||||||||||||| ||  | ||||||||||| |||| ||  ||||||||| |||     
T  16767022 ttatatcgattctataaaagtagttgagtaaaatccttcaattttgattgcgattttatgatttttcgattttgctcttcctttttgacctgaagcaaaa 16767121  T
Q  419 ttccgattttgacaacctt 437  Q
    |||| || |||| ||||||    
T  16767122 ttccaatgttgaaaacctt 16767140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 81 - 178
Target Start/End: Complemental strand, 1690893 - 1690796
Alignment:
Q  81 ccattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatag 178  Q
    |||||||||||||||  |||||||||||  ||||||  ||||||||||||||||||||||||||   |||||| |||||||||| ||||| |||||||    
T  1690893 ccattgttgtcaaaactccgacttaaatcttaaaatttaggattttgtgactttcttcaccttcgacgactcagatccatagtaaaatcccaaaatag 1690796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 19491855 - 19491982
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatacta--aaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaa 180  Q
    ||||||||||||||| ||| |||||| |||  ||||| ||||||||| ||||||||||| |||    ||||||||||||||| ||||||| |||||||      
T  19491855 attgttgtcaaaatctcgaattaaatcctataaaatctaggattttgcgactttcttcatcttaaacgactcaaatccatagcagaatcc-aaaataggt 19491953  T
Q  181 aaaatccatcaattttgattgagatttta 209  Q
    |||||||||| |||||||||| |||||||    
T  19491954 aaaatccatcgattttgattgcgatttta 19491982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 318 - 402
Target Start/End: Original strand, 34578124 - 34578208
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattccctt 402  Q
    ||||| ||||||||||||||||||  ||||||||||||||  |||||||||||||||||| || || ||||||||||| ||||||    
T  34578124 tcctacatcgattctacaaaagtccatgagtaaaatccttcaattttgattgcgattttatgagtcccgattttgctactccctt 34578208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 279 - 402
Target Start/End: Complemental strand, 13502606 - 13502483
Alignment:
Q  279 ttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttac 378  Q
    |||||||||||||| |||||| ||||| ||||||| ||||| || || |||||||||||| |  |||| ||| ||||||  ||||||||| |||||||||    
T  13502606 ttggtaaaatccatcgattttgattgcgattttacgatttcttatatagattctacaaaaatagttgactaatatccttcaattttgattacgattttac 13502507  T
Q  379 gaatctcgattttgctattccctt 402  Q
    || | |||||||| || |||||||    
T  13502506 gattttcgattttactcttccctt 13502483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 437
Target Start/End: Original strand, 8428466 - 8428576
Alignment:
Q  327 gattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgatt 426  Q
    |||||||||||| |  ||||| ||||||||| |||||||||||||||||||  | | | |||||| |||||||||| |||||| ||| ||| | ||||||    
T  8428466 gattctacaaaaatagttgagcaaaatccttcgattttgattgcgattttagaatttttgatttttctattccctttcgacctaaagcaaaatcccgatt 8428565  T
Q  427 ttgacaacctt 437  Q
    |||||||||||    
T  8428566 ttgacaacctt 8428576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 85 - 216
Target Start/End: Complemental strand, 25539353 - 25539222
Alignment:
Q  85 tgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaaa 184  Q
    |||||| |||||||||| |||||| ||||||| || || ||||  | |||||||||||||   |||| |||||||||| ||||||| ||||||   ||||    
T  25539353 tgttgttaaaatcccgatttaaatcctaaaattcaagaatttgcaattttcttcaccttcaacgacttaaatccataggagaatccgaaaataagcaaaa 25539254  T
Q  185 tccatcaattttgattgagattttacgatttc 216  Q
    |||||| ||||||| || ||||| ||||||||    
T  25539253 tccatcgattttgactgcgatttaacgatttc 25539222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 15266081 - 15266187
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||||||||||  || |||||| ||||||| ||||||||||| ||||| |||| ||||  ||| ||||||||||  || ||| | ||||||| ||    
T  15266081 cattgttgtcaaaatcatgatttaaatcctaaaattcaggattttgtaactttattcatcttcaatgattcaaatccatgttataattccaaaataggaa 15266180  T
Q  182 aaatcca 188  Q
    |||||||    
T  15266181 aaatcca 15266187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 279 - 380
Target Start/End: Original strand, 27406987 - 27407088
Alignment:
Q  279 ttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttac 378  Q
    ||||| ||||||||  ||||| ||||| ||||||  ||||| || || |||| | |||||||  ||||||||||| ||| ||||||||||||||| ||||    
T  27406987 ttggtgaaatccatcaattttgattgcgattttatgatttcttatattgattatccaaaagtagttgagtaaaattcttggattttgattgcgatattac 27407086  T
Q  379 ga 380  Q
    ||    
T  27407087 ga 27407088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 34841717 - 34841762
Alignment:
Q  220 taaactaagtcatttatgactatataccatttataacatatattta 265  Q
    |||||| ||| |||||||||||||||| ||||||||||||||||||    
T  34841717 taaactgagttatttatgactatatacaatttataacatatattta 34841762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 974467 - 974507
Alignment:
Q  225 taagtcatttatgactatataccatttataacatatattta 265  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  974467 taagtcatttatgactatatgcaatttataacatatattta 974507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 13502601 - 13502561
Alignment:
Q  181 aaaatccatcaattttgattgagattttacgatttcttata 221  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  13502601 aaaatccatcgattttgattgcgattttacgatttcttata 13502561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 82 - 126
Target Start/End: Original strand, 19245152 - 19245196
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggatttt 126  Q
    |||||||||||||||||||||||||||  |||||| |||||||||    
T  19245152 cattgttgtcaaaatcccgacttaaattttaaaattcaggatttt 19245196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 402
Target Start/End: Original strand, 34167548 - 34167608
Alignment:
Q  343 ttgagtaaaatcctttgatttt-gattgcgattttacgaatctcgattttgctattccctt 402  Q
    |||||||||||| || ||| || |||||||||||||||| | |||||||||||||||||||    
T  34167548 ttgagtaaaatcattcgatgttagattgcgattttacgattttcgattttgctattccctt 34167608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 266
Target Start/End: Original strand, 19492079 - 19492114
Alignment:
Q  231 atttatgactatataccatttataacatatatttag 266  Q
    |||||||||||||||| |||||||||||||||||||    
T  19492079 atttatgactatatacaatttataacatatatttag 19492114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 221
Target Start/End: Original strand, 27406993 - 27407032
Alignment:
Q  182 aaatccatcaattttgattgagattttacgatttcttata 221  Q
    |||||||||||||||||||| ||||||| |||||||||||    
T  27406993 aaatccatcaattttgattgcgattttatgatttcttata 27407032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 178
Target Start/End: Original strand, 31023259 - 31023318
Alignment:
Q  119 aggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatag 178  Q
    ||||||||| |||||| ||||| |||   ||||||||| |||||||||||||||||||||    
T  31023259 aggattttgcgactttattcactttcaacgactcaaattcatagtagaatcctaaaatag 31023318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 41002156 - 41002195
Alignment:
Q  227 agtcatttatgactatataccatttataacatatatttag 266  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  41002156 agtcatttatgactatatgcaatttataacatatatttag 41002195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 178
Target Start/End: Complemental strand, 5395780 - 5395682
Alignment:
Q  80 accattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatag 178  Q
    |||||||||||||||||   ||| |||||  ||||||  ||||||||| |||||| |||| |||   |||||||||||||||| ||||||  |||||||    
T  5395780 accattgttgtcaaaattttgacctaaatcataaaatataggattttgcgactttattcatcttaaatgactcaaatccatagcagaatctcaaaatag 5395682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 177
Target Start/End: Original strand, 16766710 - 16766804
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaata 177  Q
    ||||||||||||||   |||||||||  ||||||  ||||||||  || ||| |||||||||   || |||||||||||| ||||||||||||||    
T  16766710 attgttgtcaaaattttgacttaaatcttaaaatttaggattttacgattttattcaccttcaacgaatcaaatccatagcagaatcctaaaata 16766804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 265
Target Start/End: Original strand, 26251658 - 26251696
Alignment:
Q  227 agtcatttatgactatataccatttataacatatattta 265  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  26251658 agtcatttatgactatatgcaatttataacatatattta 26251696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 377
Target Start/End: Original strand, 9323997 - 9324030
Alignment:
Q  344 tgagtaaaatcctttgattttgattgcgatttta 377  Q
    |||||| |||||||||||||||||||||||||||    
T  9323997 tgagtagaatcctttgattttgattgcgatttta 9324030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 143
Target Start/End: Original strand, 15627654 - 15627715
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcacctt 143  Q
    |||| |||||||||||||||||||||| |||||||  | |||||||||  ||| ||||||||    
T  15627654 cattattgtcaaaatcccgacttaaatcctaaaatttatgattttgtggttttattcacctt 15627715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 396
Target Start/End: Complemental strand, 21869252 - 21869215
Alignment:
Q  359 gattttgattgcgattttacgaatctcgattttgctat 396  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  21869252 gattttgattgggattttacgagtctcgattttgctat 21869215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 21869321 - 21869280
Alignment:
Q  225 taagtcatttatgactatataccatttataacatatatttag 266  Q
    ||||| |||||||||||||| | |||||||||||||||||||    
T  21869321 taagttatttatgactatatgcaatttataacatatatttag 21869280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 438
Target Start/End: Complemental strand, 27749396 - 27749283
Alignment:
Q  325 tcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccga 424  Q
    |||||||||||||| || ||||||||| || ||  |||| |||||||||||||||| |    ||||| ||| | |||| ||| |||||||||| | | ||    
T  27749396 tcgattctacaaaaatccttgagtaaactcattcaatttagattgcgattttacgatttgtcattttactaattcctttcgatctgaagtaaaatactga 27749297  T
Q  425 ttttgacaaccttg 438  Q
    ||||||||| ||||    
T  27749296 ttttgacaaacttg 27749283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 29660893 - 29660938
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgt 128  Q
    |||||||||||||  ||||||||||| |||||||| ||||||||||    
T  29660893 attgttgtcaaaaatccgacttaaatcctaaaatctaggattttgt 29660938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 396
Target Start/End: Original strand, 34578087 - 34578124
Alignment:
Q  359 gattttgattgcgattttacgaatctcgattttgctat 396  Q
    |||||||||||||||||||||| || ||||||||||||    
T  34578087 gattttgattgcgattttacgagtcccgattttgctat 34578124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 260
Target Start/End: Complemental strand, 5395507 - 5395475
Alignment:
Q  228 gtcatttatgactatataccatttataacatat 260  Q
    ||||||||||||||||||| |||||||||||||    
T  5395507 gtcatttatgactatatacaatttataacatat 5395475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 437
Target Start/End: Original strand, 16767185 - 16767277
Alignment:
Q  346 agtaaaatcctttgattttgattgcgattttacga-atctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaacctt 437  Q
    ||||||||||||  |||||||||||||||||| ||  | ||||||||||| |||| ||  ||||||||| ||| |||| || |||| ||||||    
T  16767185 agtaaaatccttcaattttgattgcgattttatgatttttcgattttgctcttcctttttgacctgaagcaaaattccaatgttgaaaacctt 16767277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 413
Target Start/End: Complemental strand, 23863352 - 23863288
Alignment:
Q  349 aaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaag 413  Q
    ||||||| | ||||||| |||||||||||||||| | ||||||||| ||| ||| |||| |||||    
T  23863352 aaaatccatcgattttggttgcgattttacgaatgttgattttgcttttctctttcgacttgaag 23863288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 189; Significance: 1e-102; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 80 - 435
Target Start/End: Original strand, 5922046 - 5922400
Alignment:
Q  80 accattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaataga 179  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||   |||| | |||||||||||||||| ||||||||    
T  5922046 accattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttatatccatagtagaatcccaaaataga 5922145  T
Q  180 aaaaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngt 279  Q
     |||||||||| |||||||||| |||||| |||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||          |    
T  5922146 caaaatccatcgattttgattgcgattttgcgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaatttttt 5922245  T
Q  280 tggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacg 379  Q
     |||||||||||| || ||  ||||| |||||||||||||||| |||||||||||||||||  ||||||||||||||| |||||||||||||||| |||     
T  5922246 gggtaaaatccatcga-ttagattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtaca 5922344  T
Q  380 aatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaacc 435  Q
      |   ||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  5922345 tgttctgattttgctattccctttcgacctgaagtaaagtcccgattttgacaacc 5922400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 82 - 439
Target Start/End: Original strand, 11879599 - 11879956
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||||||||| | ||||||||| ||||||| ||||||||||  ||||||||||| |||   |||||||||| |||||||||||||||||||| ||    
T  11879599 cattgttgtcaaaattctgacttaaatcctaaaattcaggattttgcaactttcttcactttcaacgactcaaatctatagtagaatcctaaaataggaa 11879698  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttg 281  Q
    |||| |||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||          |||    
T  11879699 aaattcatcgattttgattgcgattttacgatttcttataaactaagtaatttatgactatataccatttataacatatatttagtattattattttttg 11879798  T
Q  282 gtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaa 381  Q
    ||||||||||| |||||| | ||| |||||||||||| ||| |||||||||| ||||||  ||  ||||||||||| ||||||||||||||||||||||     
T  11879799 gtaaaatccatcgattttgaatgcgattttacaattttctatatcgattctataaaagttcttaggtaaaatccttcgattttgattgcgattttacgag 11879898  T
Q  382 tctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttgg 439  Q
    |  ||||||| ||||||||||  ||||||||||||| | |||||||||||||||||||    
T  11879899 ttccgattttactattcccttttgacctgaagtaaaatcccgattttgacaaccttgg 11879956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 82 - 439
Target Start/End: Original strand, 11897015 - 11897372
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||||||||| | ||||||||| ||||||| ||||||||||  ||||||||||| |||   |||||||||| |||||||||||||||||||| ||    
T  11897015 cattgttgtcaaaattctgacttaaatcctaaaattcaggattttgcaactttcttcactttcaacgactcaaatctatagtagaatcctaaaataggaa 11897114  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttg 281  Q
    |||| |||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||          |||    
T  11897115 aaattcatcgattttgattgcgattttacgatttcttataaactaagtaatttatgactatataccatttataacatatatttagtattattattttttg 11897214  T
Q  282 gtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaa 381  Q
    ||||||||||| |||||| | ||| |||||||||||| ||| |||||||||| ||||||  ||  ||||||||||| ||||||||||||||||||||||     
T  11897215 gtaaaatccatcgattttgaatgcgattttacaattttctatatcgattctataaaagttcttaggtaaaatccttcgattttgattgcgattttacgag 11897314  T
Q  382 tctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttgg 439  Q
    |  ||||||| ||||||||||  ||||||||||||| | |||||||||||||||||||    
T  11897315 ttccgattttactattcccttttgacctgaagtaaaatcccgattttgacaaccttgg 11897372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 83 - 433
Target Start/End: Original strand, 45403029 - 45403379
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaa 182  Q
    ||||||||||||||| |||||||||| |||||||||| ||||||| ||||||||| ||||||   |||| |||||||||| ||||||  ||||||   ||    
T  45403029 attgttgtcaaaatcgcgacttaaattctaaaatccaagattttgcgactttcttgaccttcaacgacttaaatccatagaagaatctcaaaataagcaa 45403128  T
Q  183 aatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngtt-g 281  Q
    |||||||| |||||||||| |||||||||||| ||||| ||| |||||||||||||  ||||||||||||||||||||||||| ||          || |    
T  45403129 aatccatcgattttgattgcgattttacgattccttatcaaccaagtcatttatgataatataccatttataacatatatttaatattattatttttttg 45403228  T
Q  282 gtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaa 381  Q
    |||||||| || |||||| |||||  ||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||     
T  45403229 gtaaaatctatcgattttgattgcg-ttttacaatttcctatatcgattctacaaaagtctttaagtaaaatccttcgattttgattgcgattttacgag 45403327  T
Q  382 tctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaa 433  Q
    ||||||||||||||||||||| |||| |||| |||||| |||||||||||||    
T  45403328 tctcgattttgctattccctttcgacgtgaaataaagtcccgattttgacaa 45403379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 148 - 437
Target Start/End: Original strand, 23142240 - 23142528
Alignment:
Q  148 gactcaaatccatagtagaatcctaaaatagaaaaaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatatacc 247  Q
    |||| ||||||||||||||||||||||||||  ||||| |||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  23142240 gactgaaatccatagtagaatcctaaaataggcaaaattcatcgattttgattgcgattttacgatttcttataaattaagtcatttatgactatatacc 23142339  T
Q  248 atttataacatatatttagtannnnnnnnngttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgag 347  Q
    |||||||||||||||||||||          |||||||| ||||| |||||| ||||| ||||||||||||| || ||||||||||||||||| |||||     
T  23142340 atttataacatatatttagtattattattt-ttggtaaagtccatcgattttgattgcgattttacaatttcttatatcgattctacaaaagtttttgac 23142438  T
Q  348 taaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaacctt 437  Q
    ||||||| || |||||  ||||||||||||||| |  || ||||||||||||||| |||  |||| |||||| | |||||||||||||||    
T  23142439 taaaatcattcgatttaaattgcgattttacgattaccggttttgctattccctttcgaattgaaataaagtcctgattttgacaacctt 23142528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 85 - 417
Target Start/End: Complemental strand, 19704583 - 19704252
Alignment:
Q  85 tgttgtcaaaatcccgacttaaatactaaaatcca-ggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaa 183  Q
    ||||||||||||||| ||||||||  |||||| || || ||||| ||||||||||||||||   ||||||||||||||||||||| | | |||||  |||    
T  19704583 tgttgtcaaaatcccaacttaaatcttaaaattcaaggtttttgcgactttcttcaccttcaacgactcaaatccatagtagaattccataataggcaaa 19704484  T
Q  184 atccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttggt 283  Q
    ||||||| ||||||||||  ||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||           | |||    
T  19704483 atccatcgattttgattgcaattttacgatttcttataaaccaagttatttatgactatataccatttgtaacatatatttagt--ttttttttttaggt 19704386  T
Q  284 aaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatc 383  Q
    ||||||||| |||||| ||||  ||||||  |||||  | ||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||| ||    
T  19704385 aaaatccatcgattttgattgtgattttaagatttcaaatatcgattctacaacagtccttgagtaaattcctttgattttgattgcgattttacgagtc 19704286  T
Q  384 tcgattttgctattcccttccgacctgaagtaaa 417  Q
     ||||||||||||||||||  ||| |||||||||    
T  19704285 ccgattttgctattccctttggacttgaagtaaa 19704252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 85 - 391
Target Start/End: Original strand, 15294672 - 15294977
Alignment:
Q  85 tgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaaa 184  Q
    |||||| ||||||||||||||||| ||||||| |||||||||| |||||| |||||||||   |||||||||| |||||||||| | |||||||  ||||    
T  15294672 tgttgtaaaaatcccgacttaaatcctaaaattcaggattttgcgacttttttcaccttcaacgactcaaatcgatagtagaataccaaaataggcaaaa 15294771  T
Q  185 tccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttggta 284  Q
    |||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||| || |||| ||||||||||||||||          | ||||    
T  15294772 tccatcgattttgattgcgattttacaatttcttataaactaagtcatttatgactatacactatttgtaacatatatttagtattatttttt-taggta 15294870  T
Q  285 aaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatct 384  Q
    |||||||| ||||||  |||| ||||||  ||||| || || ||||||||||||||  ||||||||||||||| ||||||||||||||||||| || ||     
T  15294871 aaatccatggattttgcttgcgattttaagatttcttatatggattctacaaaagttcttgagtaaaatccttcgattttgattgcgattttaggagtcc 15294970  T
Q  385 cgatttt 391  Q
    |||||||    
T  15294971 cgatttt 15294977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 85 - 391
Target Start/End: Original strand, 15475041 - 15475346
Alignment:
Q  85 tgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaaa 184  Q
    |||||| ||||||||||||||||| ||||||| |||||||||| |||||| |||||||||   |||||||||| |||||||||| | |||||||  ||||    
T  15475041 tgttgtaaaaatcccgacttaaatcctaaaattcaggattttgcgacttttttcaccttcaacgactcaaatcgatagtagaataccaaaataggcaaaa 15475140  T
Q  185 tccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttggta 284  Q
    |||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||| || |||| ||||||||||||||||          | ||||    
T  15475141 tccatcgattttgattgcgattttacaatttcttataaactaagtcatttatgactatacactatttgtaacatatatttagtattatttttt-taggta 15475239  T
Q  285 aaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatct 384  Q
    |||||||| ||||||  |||| ||||||  ||||| || || ||||||||||||||  ||||||||||||||| ||||||||||||||||||| || ||     
T  15475240 aaatccatggattttgcttgcgattttaagatttcttatatggattctacaaaagttcttgagtaaaatccttcgattttgattgcgattttaggagtcc 15475339  T
Q  385 cgatttt 391  Q
    |||||||    
T  15475340 cgatttt 15475346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 82 - 438
Target Start/End: Complemental strand, 7489414 - 7489057
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaa----ata 177  Q
    |||| ||||||||||||| | ||||||  |||||| ||| ||||||   ||||||||||||||   |||| |||||| ||||||||| |||||    |||    
T  7489414 cattattgtcaaaatccccaattaaatcgtaaaatacagaattttg---ctttcttcaccttcaacgactaaaatccgtagtagaattctaaataaaata 7489318  T
Q  178 gaaaaaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnn 277  Q
    || |||||  ||| ||||||||||  |||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||             
T  7489317 gacaaaatttatcgattttgattgcaattttatgatttcttataaattaagtcatttatgactatatatcatttataacatatatttagtattaatattt 7489218  T
Q  278 gttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgatttta 377  Q
     |  ||||||| ||| |||||| ||||| |||||||||||| ||| |||||||||||||||||| ||||||||||||||  |||||||||||||||||||    
T  7489217 ttgagtaaaattcatcgattttgattgcgattttacaattttctatatcgattctacaaaagtccttgagtaaaatcctccgattttgattgcgatttta 7489118  T
Q  378 cgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    ||| ||   ||||||||||| |||| |||| ||||||||||| | ||||||||||||||||    
T  7489117 cgagtcctaattttgctatttcctttcgacttgaagtaaagtcctgattttgacaaccttg 7489057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 84 - 438
Target Start/End: Complemental strand, 29384444 - 29384086
Alignment:
Q  84 ttgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaa 183  Q
    ||||||||||||||| |  |||||| ||||||||   ||||||| ||||||||||||||||   ||||||||||||||||| ||||| |||||||  |||    
T  29384444 ttgttgtcaaaatccaggtttaaatcctaaaatcttagattttgcgactttcttcaccttcaacgactcaaatccatagtataatccaaaaataggcaaa 29384345  T
Q  184 atccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagta-----nnnnnnnnng 278  Q
    || |||| |||| ||||| |||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||                   
T  29384344 attcatcgattt-gattgcgattttacgatttcttataaaacaattcatttatgactatataccatttataacatatatttagtattagtattttttttt 29384246  T
Q  279 ttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttac 378  Q
    |||||||||||||| |||||| ||||| ||||||| ||||| || ||  |||||||||||||  ||||||||||||||| ||||||| ||||||||||||    
T  29384245 ttggtaaaatccatcgattttgattgcgattttacgatttcttatattaattctacaaaagtagttgagtaaaatccttcgattttggttgcgattttac 29384146  T
Q  379 gaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    || | |||||||| || ||  ||| |||||||||| ||| | ||||||||||||||||||    
T  29384145 gattgtcgatttttctcttttctttcgacctgaagcaaaatcccgattttgacaaccttg 29384086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 122 - 439
Target Start/End: Original strand, 6810861 - 6811175
Alignment:
Q  122 attttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaaatccatcaattttgattgagattttacgatttcttata 221  Q
    |||||| ||||||||||||||||   |||||||||||||||||||||  ||||||||  |||||| ||| |||||||||  |||||||||||||| ||||    
T  6810861 attttgcgactttcttcaccttcaacgactcaaatccatagtagaattttaaaataggcaaaatc-atcgattttgattacgattttacgatttcatata 6810959  T
Q  222 aactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttggtaaaatccattgattttaattgctattttacaatttcct 321  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||          |||||||||||||| |||||| ||||| ||||| ||||||| |    
T  6810960 aactaagtcatttataactatatatcatttataacatatatttagtattatttttt-ttggtaaaatccatcgattttgattgcgatttt-caatttctt 6811057  T
Q  322 agatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttc 421  Q
    | ||| |||||||||||||  |||| |||||| ||| ||||||| |||||||||||||| | ||||||||||| ||| ||| |||  ||||  |||||||    
T  6811058 atatctattctacaaaagtagttgattaaaattcttcgattttggttgcgattttacgattgtcgattttgctcttctctttcgatttgaaacaaagttc 6811157  T
Q  422 cgattttgacaaccttgg 439  Q
    ||||||||||||||||||    
T  6811158 cgattttgacaaccttgg 6811175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 83 - 437
Target Start/End: Original strand, 17646993 - 17647351
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaa 182  Q
    |||||||||||||| |||||||||||  |||||| |||||||||| ||||||||||||||||   ||||||||| ||||||||||||| ||||||| |||    
T  17646993 attgttgtcaaaattccgacttaaatcataaaattcaggattttgcgactttcttcaccttcaacgactcaaattcatagtagaatcccaaaataggaaa 17647092  T
Q  183 aatccatcaattttgattgagattttacgatttcttataaactaagtcatttatg--actatataccatttataacatatattta--gtannnnnnnnng 278  Q
    ||| |||| ||||||||||  |||| ||||||||||||||||  |||||||| |   | |||||||||||| ||| |||||||||  ||               
T  17647093 aattcatcgattttgattgttatttaacgatttcttataaacctagtcattttttttattatataccatttgtaaaatatatttaatgttattatttttt 17647192  T
Q  279 ttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttac 378  Q
    ||| |||||||||| |||||| ||||| ||||||||||||| || ||||||||||||||| |  ||||||||||||||| |||||||||||||||||||     
T  17647193 ttgataaaatccatcgattttgattgcgattttacaatttcttatatcgattctacaaaactagttgagtaaaatccttcgattttgattgcgattttat 17647292  T
Q  379 gaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaacctt 437  Q
    || | |||||||||||  || ||| |||||||||| ||| | |||||||| ||||||||    
T  17647293 gattgtcgattttgctcatctctttcgacctgaagcaaaatcccgattttaacaacctt 17647351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 82 - 437
Target Start/End: Original strand, 31424162 - 31424518
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    |||| |||||||||||| ||||||||| ||||||| |||||||||  |||||||||| | |||   ||||||||||||||| ||||||| |||||||  |    
T  31424162 cattattgtcaaaatcctgacttaaattctaaaattcaggattttacgactttcttccctttcaacgactcaaatccatagaagaatcccaaaataggca 31424261  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagta----nnnnnnnnn 277  Q
    ||||||||  |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||                 
T  31424262 aaatccattgattttgattgcgattttacgatttcttataaactaagtcgtttatgactatataccaattataacatatatttagtattttttttttttt 31424361  T
Q  278 gttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgatttta 377  Q
     || |||||||| || |||||  ||||| ||||||| ||||| || ||| |||| |||| |||  ||||||||||||||    |||||||||||||||||    
T  31424362 ttttgtaaaatctatcgatttggattgcaattttactatttcttatatcaattccacaagagtagttgagtaaaatcct---gttttgattgcgatttta 31424458  T
Q  378 cgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaacctt 437  Q
    ||| | |||||||||||  || ||| |||||||||||||| |  ||||||||||||||||    
T  31424459 cgattgtcgattttgctcatctctttcgacctgaagtaaaatctcgattttgacaacctt 31424518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 82 - 439
Target Start/End: Complemental strand, 22910332 - 22909977
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||| ||| || |||||||||||||| |||||||  ||||||||  |||||||||||| |||   |||||||||| ||||||||||| ||||||||  |    
T  22910332 cattgatgtaaacatcccgacttaaatcctaaaatttaggattttacgactttcttcacattcaacgactcaaatctatagtagaatcttaaaataggca 22910233  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttg 281  Q
    ||||||||  |||||||||| ||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||          |||    
T  22910232 aaatccattgattttgattgcgattttaagatttcttataaattaagtaatttatgactatataccatttataacatatacttagtactacttttt-ttg 22910134  T
Q  282 gtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaa 381  Q
     ||||   ||| || ||| ||||| ||||||| ||||| || ||||||||||||||| |  |||| ||||||||||  |||| | ||||||||||||||     
T  22910133 ttaaacatcatcgactttgattgcgattttacgatttcttatatcgattctacaaaaatagttgaataaaatccttcaatttcggttgcgattttacgat 22910034  T
Q  382 tctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttgg 439  Q
    | |||||||| || ||| ||| |||| ||| |||||  ||||||||||||||||||||    
T  22910033 tgtcgatttttctcttctctttcgacatgatgtaaa-atccgattttgacaaccttgg 22909977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 151 - 380
Target Start/End: Original strand, 32424400 - 32424631
Alignment:
Q  151 tcaaatccatagtagaatcctaaaatagaaaaaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatt 250  Q
    |||||| |||||||||||||||||||||| |||||  ||  |||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  32424400 tcaaattcatagtagaatcctaaaatagacaaaatttatagattttgattgcgattttacgatttattatatactaagtcatttatgactatataccatt 32424499  T
Q  251 tataac--atatatttagtannnnnnnnngttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagt 348  Q
    ||||||  ||||||||||||          | | ||||||| || |||||| ||||| ||||||||||||||||  |||||||||||||| || ||||||    
T  32424500 tataacatatatatttagtattaatttttctggataaaatctatcgatttttattgcgattttacaatttcctatctcgattctacaaaactccttgagt 32424599  T
Q  349 aaaatcctttgattttgattgcgattttacga 380  Q
    ||||||||| |||||| |||||||||||||||    
T  32424600 aaaatccttcgattttaattgcgattttacga 32424631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 87 - 268
Target Start/End: Complemental strand, 3094378 - 3094187
Alignment:
Q  87 ttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaaatc 186  Q
    ||||||||||  ||||||||||  |||||| ||||||||||  |||||||||||||||   |||||||||||||||||||||||||||||||  ||||||    
T  3094378 ttgtcaaaatttcgacttaaatcttaaaattcaggattttgctactttcttcaccttcaacgactcaaatccatagtagaatcctaaaataggcaaaatc 3094279  T
Q  187 catcaattttgattgagattttacgatttct----------tataaactaagtcatttatgactatataccatttataacatatatttagta 268  Q
    |||| |||||||||| ||||||||||||| |          |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3094278 catcgattttgattgcgattttacgattttttttttttttatataaactaagtcatttatgactatataccatttataacatatatttagta 3094187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 80 - 322
Target Start/End: Complemental strand, 27836596 - 27836354
Alignment:
Q  80 accattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaataga 179  Q
    ||||||||||||||||| |  ||||| || ||||||| |||||||||| |  ||| |||||||||    ||| |||||||||||||||| ||||||||      
T  27836596 accattgttgtcaaaattcaaacttagatcctaaaattcaggattttgcggttttattcaccttcaacaactgaaatccatagtagaattctaaaataag 27836497  T
Q  180 aaaaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngt 279  Q
     ||||| ||||||||||||||   ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||         |     
T  27836496 caaaattcatcaattttgattacaattttacaatttcttataaactaagtcatttatgactatataccatttataacatgtatttagtatttttttttgc 27836397  T
Q  280 tggtaaaatccattgattttaattgctattttacaatttccta 322  Q
    ||||||||||||| |||||| ||||  ||||||||||||||||    
T  27836396 tggtaaaatccatcgattttgattgtgattttacaatttccta 27836354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 282 - 437
Target Start/End: Complemental strand, 24414217 - 24414062
Alignment:
Q  282 gtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaa 381  Q
    ||||||| |||||| ||| |||   |||||||||||||||| ||||||||||||||| |  ||||||||||||||| ||||||||||||||||||||||     
T  24414217 gtaaaattcattgaatttgattaggattttacaatttcctatatcgattctacaaaaattcttgagtaaaatccttcgattttgattgcgattttacgag 24414118  T
Q  382 tctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaacctt 437  Q
    |||  |||||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  24414117 tctaaattttgctattccctttcgacatgaagtaaagttccaattttgacaacctt 24414062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 171 - 265
Target Start/End: Complemental strand, 9212296 - 9212202
Alignment:
Q  171 taaaatagaaaaaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatattta 265  Q
    |||||||| ||||||||||| |||||||||| ||||||| ||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  9212296 taaaataggaaaaatccatcgattttgattgcgattttaagatttcttataaactaaatcatttatgaccatataccatttataacctatattta 9212202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 318 - 428
Target Start/End: Original strand, 2040354 - 2040464
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaa 417  Q
    ||||| ||||||||||||||||||  |||||||||||||| |||||||||||||||||||||| |  ||||||||||| || ||| |||| |||||||||    
T  2040354 tcctacatcgattctacaaaagtccatgagtaaaatccttcgattttgattgcgattttacgagttccgattttgctactctctttcgacttgaagtaaa 2040453  T
Q  418 gttccgatttt 428  Q
    || ||||||||    
T  2040454 gtcccgatttt 2040464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 87 - 265
Target Start/End: Complemental strand, 6292467 - 6292289
Alignment:
Q  87 ttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaaatc 186  Q
    |||| ||||| |||||||||||  ||||||  | |||||||||||||| |||| |||    |||||||| |||||||| ||| ||||||||  ||||||     
T  6292467 ttgttaaaataccgacttaaatcttaaaatttaagattttgtgacttttttcatctttaacgactcaaacccatagtataattctaaaataagaaaaatt 6292368  T
Q  187 catcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatattta 265  Q
    || | |||||||||| | | |||| |||| |||||| ||||||||||||| |||||||||||||||||| |||||||||    
T  6292367 caacgattttgattgcggtcttacaatttattataatctaagtcatttatcactatataccatttataaaatatattta 6292289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 316 - 430
Target Start/End: Original strand, 16752256 - 16752370
Alignment:
Q  316 tttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagta 415  Q
    ||||||| ||| ||||||||||| || ||||||||||||||| ||||||| |||||||||||||| || | ||||||||| |||||| |||| |||||||    
T  16752256 tttcctacatcaattctacaaaattccttgagtaaaatccttcgattttgtttgcgattttacgagtcccaattttgctactccctttcgacttgaagta 16752355  T
Q  416 aagttccgattttga 430  Q
    ||||||| |||||||    
T  16752356 aagttccaattttga 16752370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 324 - 440
Target Start/End: Complemental strand, 40541708 - 40541592
Alignment:
Q  324 atcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccg 423  Q
    |||||||||||| ||||| |||| ||||||| ||  ||||||||||||||||||||| || ||||||||||| | |||| |||| ||||||||||| |||    
T  40541708 atcgattctacagaagtccttgaataaaatctttcaattttgattgcgattttacgagtcccgattttgctacttcctttcgacttgaagtaaagtcccg 40541609  T
Q  424 attttgacaaccttggg 440  Q
    ||||||| |||||||||    
T  40541608 attttgataaccttggg 40541592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 82 - 158
Target Start/End: Complemental strand, 477177 - 477101
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatcc 158  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||  ||||| ||||||    
T  477177 cattgttgtcaaaatcctgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaatgacttaaatcc 477101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 279 - 390
Target Start/End: Complemental strand, 15761291 - 15761180
Alignment:
Q  279 ttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttac 378  Q
    |||||||||||||| |||||| ||||| ||||||| | ||| || |||||||||||||||||  ||||||||||||||| |||||  |||||||||||||    
T  15761291 ttggtaaaatccatcgattttgattgcgattttactacttcttatatcgattctacaaaagtaattgagtaaaatccttcgatttatattgcgattttac 15761192  T
Q  379 gaatctcgattt 390  Q
    || |||| ||||    
T  15761191 gattctcaattt 15761180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 327 - 395
Target Start/End: Original strand, 7262006 - 7262074
Alignment:
Q  327 gattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgcta 395  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||||||| || |||||||||||    
T  7262006 gattctacaaaagtccttgagtaaaatcctttaattttgattgcgattttacgagtcccgattttgcta 7262074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 301 - 438
Target Start/End: Original strand, 17566316 - 17566453
Alignment:
Q  301 attgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattccc 400  Q
    ||||| ||||||||||||| || |||  ||||||||||||  ||||||||||| ||| |||||||||||| ||||||||| | || |||||||| |||||    
T  17566316 attgcgattttacaatttcttatatctgttctacaaaagtagttgagtaaaattcttcgattttgattgcaattttacgattttcaattttgctcttccc 17566415  T
Q  401 ttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    ||  ||||||||| ||| | | |||||| | |||||||    
T  17566416 ttttgacctgaagcaaaatcctgattttaaaaaccttg 17566453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 78 - 178
Target Start/End: Complemental strand, 15761573 - 15761473
Alignment:
Q  78 acaccattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaata 177  Q
    |||||||||||||||||||| |||||||||| ||||| ||||||||||||||| ||| || ||||||   ||||||||| ||||| | ||||| ||||||    
T  15761573 acaccattgttgtcaaaatctcgacttaaatcctaaactccaggattttgtgagtttatttaccttcaacgactcaaattcatagcaaaatcccaaaata 15761474  T
Q  178 g 178  Q
    |    
T  15761473 g 15761473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 330 - 397
Target Start/End: Complemental strand, 27836181 - 27836114
Alignment:
Q  330 tctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctatt 397  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||   |||||||||||    
T  27836181 tctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgaatcctaattttgctatt 27836114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 301 - 438
Target Start/End: Original strand, 15231839 - 15231976
Alignment:
Q  301 attgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattccc 400  Q
    ||||| ||||||||||||  || |||||||||||||||||  |||||||||||| |  ||||||  |||||||||||||| | ||||||||||| ||| |    
T  15231839 attgcgattttacaattttttatatcgattctacaaaagtagttgagtaaaatcgtacgattttagttgcgattttacgattgtcgattttgctcttctc 15231938  T
Q  401 ttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    || |||| ||||| ||| |  ||| ||| |||||||||    
T  15231939 tttcgacttgaagcaaaatctcgaatttaacaaccttg 15231976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 82 - 186
Target Start/End: Complemental strand, 24056698 - 24056594
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||| ||||||||  ||||||||| |||||||||||||||||| |||||| ||||| ||    |||||||||||||||   ||||| |||||||| |    
T  24056698 cattgttatcaaaatcttgacttaaatcctaaaatccaggattttgcgactttattcacatttaacgactcaaatccatagcgaaatcccaaaatagaca 24056599  T
Q  182 aaatc 186  Q
    |||||    
T  24056598 aaatc 24056594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 127
Target Start/End: Original strand, 23136346 - 23136393
Alignment:
Q  80 accattgttgtcaaaatcccgacttaaatactaaaatccaggattttg 127  Q
    |||||| |||||||||||||||||||||| ||||||| ||||||||||    
T  23136346 accattattgtcaaaatcccgacttaaatcctaaaattcaggattttg 23136393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 434
Target Start/End: Complemental strand, 24056455 - 24056348
Alignment:
Q  327 gattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgatt 426  Q
    |||||||||||| |  ||||||||||||||| |||||||||| | |||||| ||   || |||||||| ||||||| |||||||||| ||| |  || ||    
T  24056455 gattctacaaaactagttgagtaaaatccttcgattttgattaccattttatgatattcaattttgctcttccctttcgacctgaagcaaaatctcggtt 24056356  T
Q  427 ttgacaac 434  Q
    ||||||||    
T  24056355 ttgacaac 24056348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 124
Target Start/End: Complemental strand, 27672347 - 27672303
Alignment:
Q  80 accattgttgtcaaaatcccgacttaaatactaaaatccaggatt 124  Q
    |||||||||| |||||||||||||||||| |||||||||| ||||    
T  27672347 accattgttgccaaaatcccgacttaaattctaaaatccaagatt 27672303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 354
Target Start/End: Original strand, 8582239 - 8582314
Alignment:
Q  279 ttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatc 354  Q
    |||||||||| ||| |||||| ||||  ||||||| ||||| || ||| |||||||||||||  ||||||||||||    
T  8582239 ttggtaaaattcatcgattttgattgtaattttacgatttcttatatcaattctacaaaagtagttgagtaaaatc 8582314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 439
Target Start/End: Original strand, 26879787 - 26879866
Alignment:
Q  360 attttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttgg 439  Q
    ||||||||||||||||||||| | | |||||||||  |||||| | ||||||| |||| |  ||| ||||||||||||||    
T  26879787 attttgattgcgattttacgatttttgattttgctgatccctttcaacctgaactaaaatcacgactttgacaaccttgg 26879866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 17788436 - 17788374
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttc 144  Q
    |||||||||||||||| | ||||||||  ||||||| ||||||||| ||||||  ||||||||    
T  17788436 cattgttgtcaaaatcgcaacttaaattttaaaatctaggattttgagactttactcaccttc 17788374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 265
Target Start/End: Complemental strand, 40541819 - 40541781
Alignment:
Q  227 agtcatttatgactatataccatttataacatatattta 265  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  40541819 agtcatttatgactatatgcaatttataacatatattta 40541781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 229 - 265
Target Start/End: Original strand, 16752156 - 16752192
Alignment:
Q  229 tcatttatgactatataccatttataacatatattta 265  Q
    |||||||||||||||| | ||||||||||||||||||    
T  16752156 tcatttatgactatatgcaatttataacatatattta 16752192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 26879778 - 26879810
Alignment:
Q  183 aatccatcaattttgattgagattttacgattt 215  Q
    ||||||||||||||||||| |||||||||||||    
T  26879778 aatccatcaattttgattgcgattttacgattt 26879810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 30240296 - 30240264
Alignment:
Q  183 aatccatcaattttgattgagattttacgattt 215  Q
    ||||||||||||||||||| |||||||||||||    
T  30240296 aatccatcaattttgattgcgattttacgattt 30240264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 79 - 438
Target Start/End: Complemental strand, 9352196 - 9351837
Alignment:
Q  79 caccattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatag 178  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||   |||||||||| |||| ||| ||| |||||||    
T  9352196 caccattgttgtcaaaatcccgacttaaatcctaaaatccagggttttgcgactttcttcaccttcaaagactcaaatctatagcagagtcccaaaatag 9352097  T
Q  179 aaaaaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnng 278  Q
    | ||||||| || |||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||              
T  9352096 acaaaatccgtcgattttgattgcgattttatgatttcttataaactaagtcatttttgactatataccatttataacatatatttagtattaatttttt 9351997  T
Q  279 ttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttac 378  Q
    | |||||||| ||| |||||| ||||  |||||||||||||||| || ||||||||||||||| |||  |||||||||  ||||||||||||||||||||    
T  9351996 tgggtaaaattcatcgattttgattgtgattttacaatttcctatatagattctacaaaagtccttggataaaatcctacgattttgattgcgattttac 9351897  T
Q  379 gaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    || || |||||||||||||| ||| ||||||||||||||||   ||||||||||||||||    
T  9351896 gagtcccgattttgctattcgctttcgacctgaagtaaagtcttgattttgacaaccttg 9351837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 83 - 438
Target Start/End: Original strand, 23528656 - 23529011
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaa 182  Q
    ||||||||||||||||| ||||||||  |||||| |||||||||| ||||||||||| ||||   |||||||||||||||||||||||||||||||  ||    
T  23528656 attgttgtcaaaatcccaacttaaatcttaaaattcaggattttgcgactttcttcatcttcaacgactcaaatccatagtagaatcctaaaataggcaa 23528755  T
Q  183 aatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttgg 282  Q
    |||| ||| ||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||          | ||    
T  23528756 aatctatcgattttgaatgcgattttacgatttcttataaacgaagtcatttatgactatataccatttataacgtatatttattattattattattggg 23528855  T
Q  283 taaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaat 382  Q
    |||||||||| |||||| ||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |    
T  23528856 taaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagt 23528955  T
Q  383 ctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    | |||| || || |||| ||   ||||||| |||||||||||||||||||||||||    
T  23528956 cccgatcttactgttcctttttaacctgaaataaagttccgattttgacaaccttg 23529011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 80 - 438
Target Start/End: Original strand, 13100188 - 13100545
Alignment:
Q  80 accattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaataga 179  Q
    |||||| ||||||||||||| |||||||| |||||||| ||||||||  |||||||||||| |||   |||||||||||||||||||||||||||||||     
T  13100188 accattattgtcaaaatcccaacttaaattctaaaatcgaggattttacgactttcttcacgttcaacgactcaaatccatagtagaatcctaaaatagg 13100287  T
Q  180 aaaaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngt 279  Q
     |||| ||||| |||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||          |    
T  13100288 caaaaaccatcgattttgattgcgattttacaatttcttataaaccaagtcatttatgactatataccatttgtaacatatatttagtatttattttt-t 13100386  T
Q  280 tggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacg 379  Q
     |||||||||||| |||||| ||||| ||||||  ||||| || |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  13100387 gggtaaaatccatcgattttgattgcgattttaagatttcttatatcgattctacaaatgtccttgagtaaaatcctttgattttgattgcgattttacg 13100486  T
Q  380 aatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    | |  ||||||||| |||||||| |||| ||||||||||| ||||||||||||||||||    
T  13100487 agttccgattttgccattccctttcgacttgaagtaaagtcccgattttgacaaccttg 13100545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 82 - 438
Target Start/End: Complemental strand, 18304941 - 18304592
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccct-gactcaaatccatagtagaatcctaaaatagaa 180  Q
    |||||||||||||||||| |||||||| ||||||||||| |||||| ||||||||||||||||    ||||||||| ||||||||||||  ||||||||     
T  18304941 cattgttgtcaaaatcccaacttaaatcctaaaatccagtattttgcgactttcttcaccttcaaacgactcaaattcatagtagaatctcaaaatagac 18304842  T
Q  181 aaaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngtt 280  Q
    ||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||          ||    
T  18304841 aaaatccatcaattttgattgcgattt-acgatttcttataagctaagtcatttatgactatataccattcataacgtatatttagtattaatttttttt 18304743  T
Q  281 ggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacga 380  Q
    | |||||||||| |||||| ||||| |||||||||||||||| |||||||||||||||||| || |||||||||||| |||||||| ||||||||||       
T  18304742 gataaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtcctttagtaaaatccttcgattttgaatgcgatttta--- 18304646  T
Q  381 atctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
        |||||||||| || |||| ||||||||||| |||| ||||||||||||||||||    
T  18304645 ----cgattttgctttttcctttcgacctgaagtgaagtcccgattttgacaaccttg 18304592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 85 - 419
Target Start/End: Complemental strand, 19010073 - 19009741
Alignment:
Q  85 tgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaaa 184  Q
    |||||||||||||| ||||||||| ||||||| |||||||||| |||||| |||||||||  ||||| |||||||||||| ||| ||||||||   ||||    
T  19010073 tgttgtcaaaatccggacttaaatcctaaaattcaggattttgcgacttttttcaccttcaatgacttaaatccatagtaaaattctaaaataagcaaaa 19009974  T
Q  185 tccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttggta 284  Q
    |||||| |||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||  ||||||| ||            ||||    
T  19009973 tccatcgattttgattgcgattttacgatttcttataaattaagtcatttataactatataccatttataac--atatttaatattttttttttggggta 19009876  T
Q  285 aaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatct 384  Q
    ||||||| ||||||| ||||| |||||||||||||||| ||||||| |||||||||  |||||||||||||||||||||||||||||||||||||| ||     
T  19009875 aaatccaatgattttgattgcgattttacaatttcctatatcgattttacaaaagttcttgagtaaaatcctttgattttgattgcgattttacgagtcc 19009776  T
Q  385 cgattttgctattcccttccgacctgaagtaaagt 419  Q
    |||||||||||||||||| ||| ||||||||||||    
T  19009775 cgattttgctattccctttcgatctgaagtaaagt 19009741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 82 - 439
Target Start/End: Complemental strand, 25146898 - 25146541
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||||||||||| ||||||||| ||||||| ||| |||||| ||||||||||||||||   ||||||||| ||||||||||||| |||||||| |    
T  25146898 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgactcaaattcatagtagaatcccaaaatagaca 25146799  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttg 281  Q
    || | |||||||||| |||| || |||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||          | |    
T  25146798 aagtacatcaattttaattgcga-tttacgatttcttataaactaagttatttatgactatatacaatttataacgtatatttagtatcaatttttttgg 25146700  T
Q  282 gtaaaatccattgattttaattgcta-ttttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacga 380  Q
    ||||||||||| |||||| ||||| | ||||| ||||| ||| ||||||||||| |||| | ||||||||||||||| ||||||||||||||||||||||    
T  25146699 gtaaaatccatcgattttgattgcgatttttagaattttctatatcgattctacgaaagaccttgagtaaaatccttcgattttgattgcgattttacga 25146600  T
Q  381 atctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttgg 439  Q
     |  |||||||||||||||||| | |||||||||||||| | |||||||||||||||||    
T  25146599 tttccgattttgctattccctttcaacctgaagtaaagtcctgattttgacaaccttgg 25146541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 82 - 429
Target Start/End: Complemental strand, 9955165 - 9954816
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    |||||||||||||||||| |||||||| |||||||  ||||||||| ||||||||||||||||   |||| |||||||  ||||||||| ||||||   |    
T  9955165 cattgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgacttaaatccaatgtagaatcccaaaataagca 9955066  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngtt- 280  Q
    ||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||          ||     
T  9955065 aaatccatcgattttgattgcgattttacgatttcttataaactaggtcatttatgactatataccatttataacatatattcagtattattattttttt 9954966  T
Q  281 -ggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacg 379  Q
      ||||||||||| ||| || ||||| |||||||||||||||| || ||||||  ||||||| ||  ||||||||||| |||||||||||||||||||||    
T  9954965 gtgtaaaatccatcgatcttgattgcgattttacaatttcctatatggattcttgaaaagtcctttggtaaaatccttcgattttgattgcgattttacg 9954866  T
Q  380 aatctcgattttgctattcccttccgacctgaagtaaagttccgattttg 429  Q
    | || |||||||||||||||||| |||||| |||||||||||||||||||    
T  9954865 agtcccgattttgctattccctttcgaccttaagtaaagttccgattttg 9954816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 90 - 435
Target Start/End: Complemental strand, 16125580 - 16125232
Alignment:
Q  90 tcaaaatcccgacttaaatactaaaatccaggattttgtgactttctt---caccttccctgactcaaatccatagtagaatcctaaaatagaaaaaatc 186  Q
    ||||||||| ||||||||| ||||||| |||||||||| |||||||||   |||||||   |||  |||||||||||| |||| ||||||||  ||||||    
T  16125580 tcaaaatcctgacttaaatcctaaaattcaggattttgcgactttctttttcaccttcaacgacctaaatccatagtaaaatcttaaaataggcaaaatc 16125481  T
Q  187 catcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttggtaaa 286  Q
    |||  |||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||          | |||||     
T  16125480 cattgattttgattgcgattttacgattttttataaactaagtcatttatgaatatataccatttataacatatatttagtattattatttttgggtaac 16125381  T
Q  287 atccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcg 386  Q
     ||||| |||||| ||||| ||||||||||||| || |||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||| || |     
T  16125380 gtccatcgattttgattgcgattttacaatttcttatatcgattctacaaatgtccttgagtaaaatccttcgattttgattgcgattttacgagtccca 16125281  T
Q  387 attttgctattcccttccgacctgaagtaaagttccgattttgacaacc 435  Q
    ||||| |||||||||| ||||||||||||||||||||||||| ||||||    
T  16125280 attttactattccctttcgacctgaagtaaagttccgattttaacaacc 16125232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 82 - 436
Target Start/End: Complemental strand, 21846398 - 21846050
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    |||||||||||||||||||| |||||| |||||||||||||||||| |||||| |||||||||   ||||||||||||||||||||||  ||||||||||    
T  21846398 cattgttgtcaaaatcccgagttaaatcctaaaatccaggattttgcgacttttttcaccttcaacgactcaaatccatagtagaatctcaaaatagaaa 21846299  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttg 281  Q
    ||||||||| |||||||||| |||||||   ||| | ||||||   ||||||||| ||||||||  |||||||||||||||||||||          | |    
T  21846298 aaatccatcgattttgattgcgatttta---tttttcataaac---gtcatttataactatatataatttataacatatatttagtattaatttttttgg 21846205  T
Q  282 gtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaa 381  Q
    ||||||| |||  ||||| ||||| ||||||||||||| || |||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||     
T  21846204 gtaaaattcatctattttgattgcgattttacaatttcttatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttaagag 21846105  T
Q  382 tctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaacct 436  Q
    || |||||||||||||||||| ||||||| |||||||| | ||||||||||||||    
T  21846104 tcccgattttgctattccctttcgacctggagtaaagtcctgattttgacaacct 21846050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 84 - 438
Target Start/End: Complemental strand, 42180193 - 42179845
Alignment:
Q  84 ttgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaa 183  Q
    |||||||||||||||| |||||||| ||||||| |||||||||| |||||||||| |||||   || ||||||||||||||||||   |||||||  |||    
T  42180193 ttgttgtcaaaatcccaacttaaattctaaaattcaggattttgcgactttcttccccttcaacgagtcaaatccatagtagaatttcaaaataggcaaa 42180094  T
Q  184 atccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagta-nnnnnnnnngttgg 282  Q
    || |||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||           ||||    
T  42180093 atacatcgattttgattgtgattctacgatttcttataaactaagtcatttatgactatataccatttataacatatatatagtattatattttttttgg 42179994  T
Q  283 taaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaat 382  Q
    |||||||||| |||||| ||||   |||||||||||||||       |||||||||||| | || |||||||||| |||||||||||||||||||||| |    
T  42179993 taaaatccatcgattttgattgtggttttacaatttccta-------tctacaaaagtcctcgaataaaatccttcgattttgattgcgattttacgagt 42179901  T
Q  383 ctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
     |||||| ||||||||||||   ||| |||||||| ||| ||||||||||||||||    
T  42179900 ttcgattatgctattcccttttaacccgaagtaaatttctgattttgacaaccttg 42179845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 83 - 368
Target Start/End: Complemental strand, 13276395 - 13276112
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaa 182  Q
    ||||||||||||||||||| |||||| |||||||| ||||||||| ||||||||||| ||||   |||  ||||||||||||||||||||||||||  ||    
T  13276395 attgttgtcaaaatcccgatttaaatcctaaaatctaggattttgcgactttcttcatcttcaacgacctaaatccatagtagaatcctaaaataggcaa 13276296  T
Q  183 aatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttgg 282  Q
    |||| ||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||          ||||    
T  13276295 aatcaatcgattttgattgcgattttacgatttcttataaattaagtcatttatgactatatatcatttataacatatatttagtattattattttttgg 13276196  T
Q  283 taaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgatt 368  Q
    || | ||||| |||||| ||||| ||||||||||||| || ||||||||||||||| || || |||  ||||||| ||||||||||    
T  13276195 tatagtccatcgattttgattgcaattttacaatttcttatatcgattctacaaaattccttaagt--aatccttcgattttgatt 13276112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 84 - 438
Target Start/End: Complemental strand, 17869873 - 17869524
Alignment:
Q  84 ttgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaa 183  Q
    ||||||||||||||| |||||||||  ||||     |||||||| ||||||||||||||||   |||  ||||||| ||||||||||||||||||  |||    
T  17869873 ttgttgtcaaaatcctgacttaaatcttaaa-----ggattttgcgactttcttcaccttcgacgacctaaatccacagtagaatcctaaaataggcaaa 17869779  T
Q  184 atccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttggt 283  Q
    || | || ||||||||||  ||||||||||||||| ||||||||||| ||||| || |||||| ||||| |||||||||||||||          |||||    
T  17869778 attcttcgattttgattgcaattttacgatttcttttaaactaagtcttttataaccatatactatttacaacatatatttagtattattattttttggt 17869679  T
Q  284 aaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatc 383  Q
    ||||| ||| |||||| ||||| ||||||||||||  || || ||||||| ||||||| |||||||||||||||||||||||||||||||||||||  ||    
T  17869678 aaaattcatcgattttgattgcgattttacaattttttacattgattctataaaagtccttgagtaaaatcctttgattttgattgcgattttacgtgtc 17869579  T
Q  384 tcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
     |||||||||| |||||||  |||||||| || ||| ||||||||||||| ||||    
T  17869578 ccgattttgctcttcccttttgacctgaattagagtcccgattttgacaatcttg 17869524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 85 - 438
Target Start/End: Original strand, 12513283 - 12513626
Alignment:
Q  85 tgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaaa 184  Q
    |||||||||||||||||||||||| ||| |||| ||||||||| ||||||||||| ||||   ||||||||||||||||| |||| |||||||   ||||    
T  12513283 tgttgtcaaaatcccgacttaaatcctacaatctaggattttgcgactttcttcagcttcaacgactcaaatccatagtaaaatcataaaataatcaaaa 12513382  T
Q  185 tccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttggta 284  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||  ||||||| ||          ||||||    
T  12513383 tccatcgattttgattgcgattttacgatttcttataaactaagtcatttacgactatataccatatataac--atatttaatattatatttt-ttggta 12513479  T
Q  285 aaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatct 384  Q
    ||||| || |||||| ||||| ||||||||||||| ||       |||||| ||||  ||||||||||||||||||||||| |||||||||||| | | |    
T  12513480 aaatctatcgattttgattgcgattttacaatttctta-------tctacagaagtagttgagtaaaatcctttgattttggttgcgattttacaattgt 12513572  T
Q  385 cgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    |||||||||| ||| |||  ||||||||| ||| | || |||||||||||||||    
T  12513573 cgattttgctcttctcttttgacctgaagcaaaatcccaattttgacaaccttg 12513626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 83 - 402
Target Start/End: Complemental strand, 9128969 - 9128648
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaa 182  Q
    |||||||| |||||| |||||||||| ||||||   ||||| ||| |||||||||||| ||    |||||||||  ||||||||||| ||||||||| ||    
T  9128969 attgttgttaaaatcacgacttaaatcctaaaaattaggatcttgcgactttcttcacatttaacgactcaaatttatagtagaatcttaaaatagacaa 9128870  T
Q  183 aatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagta--nnnnnnnnngtt 280  Q
    ||| |||| |||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||            ||    
T  9128869 aattcatcgattttgattgcgatttgacgatttcttataaactaagttatttttgactatataccatttataacatatctttagtattattattatcatt 9128770  T
Q  281 ggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacga 380  Q
     ||||||| |||  ||||| ||||| |||||||||||| ||| |||||| |||||||| || || |||||||||||| ||||||||| | ||||||||||    
T  9128769 tgtaaaattcataaattttgattgcgattttacaattttctatatcgatcctacaaaaatcctttagtaaaatccttcgattttgatcgtgattttacga 9128670  T
Q  381 atctcgattttgctattccctt 402  Q
     || ||||||||||||||||||    
T  9128669 gtcccgattttgctattccctt 9128648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 171 - 435
Target Start/End: Original strand, 32881415 - 32881672
Alignment:
Q  171 taaaatagaaaaaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtann 270  Q
    ||||||||  ||||| |||| |||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||      
T  32881415 taaaataggcaaaattcatcgattttgattgcgattttacgatttcttataaattaagtcattcatgactatataccatttataacatatatttagtatt 32881514  T
Q  271 nnnnnnngttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgc 370  Q
            || |||||| ||||||||||| ||||| ||||||||||||| || |||||||||||||| ||  ||||||||||||||| |||||   ||||    
T  32881515 t-------tttgtaaaagccattgattttgattgcgattttacaatttcttatatcgattctacaaacgtagttgagtaaaatccttcgatttcagttgc 32881607  T
Q  371 gattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaacc 435  Q
    |||||||||| | ||||||||||| ||| ||| | | |||||| ||| | |||||||||| ||||    
T  32881608 gattttacgattgtcgattttgcttttctctttcaatctgaagcaaaatcccgattttgaaaacc 32881672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 82 - 268
Target Start/End: Complemental strand, 9327345 - 9327157
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||| ||||||| ||||||||| |||||||  ||| ||||| |||||||| |||||||   |||||||||| |||||| ||||| |||||||| |    
T  9327345 cattgttgttaaaatcctgacttaaatcctaaaatttagggttttgcgactttctacaccttcaacgactcaaatctatagtaaaatcccaaaatagaca 9327246  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtca--tttatgactatataccatttataacatatatttagta 268  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||  ||| |||||||||||||||||||| ||||||||||||    
T  9327245 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttttttgactatataccatttataatatatatttagta 9327157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 182 - 435
Target Start/End: Original strand, 47785958 - 47786209
Alignment:
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttg 281  Q
    |||||||||  |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         | ||    
T  47785958 aaatccatcggttttgattgcaattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtattattttttg-tg 47786056  T
Q  282 gtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaa 381  Q
    ||||||||||| |||||| ||| | |||||   ||||| || ||| |||||||||||||  ||||||||||||||| ||||||| ||| ||||||||||     
T  47786057 gtaaaatccatcgatttttatttcgattttgtgatttcttatatcaattctacaaaagtagttgagtaaaatccttcgattttggttgtgattttacgat 47786156  T
Q  382 tctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaacc 435  Q
    | ||||||||||| ||| ||| | |||| ||| ||| | |||||||||||||||    
T  47786157 tgtcgattttgctcttctctttcaacctaaag-aaaatcccgattttgacaacc 47786209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 301 - 437
Target Start/End: Complemental strand, 14074394 - 14074258
Alignment:
Q  301 attgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattccc 400  Q
    ||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||| ||||||| || |  | ||||||||||||||    
T  14074394 attgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgtgattttatgagttccaattttgctattccc 14074295  T
Q  401 ttccgacctgaagtaaagttccgattttgacaacctt 437  Q
    || |||||||||||||||| | |||||||||||||||    
T  14074294 tttcgacctgaagtaaagtcctgattttgacaacctt 14074258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 279 - 438
Target Start/End: Complemental strand, 17055852 - 17055694
Alignment:
Q  279 ttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttac 378  Q
    ||||||||||||||  ||||| ||||| ||||||||||||| |  |||||||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  17055852 ttggtaaaatccatccattttgattgcaattttacaatttcttgtatcgattctacaaaagtagttgagtaaaatccttcgattttgattgcgattttac 17055753  T
Q  379 gaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    || || ||||||| | || ||||| |||||| ||||||||  ||||||||||||||||||    
T  17055752 gagtcccgattttacaatcccctttcgacct-aagtaaagacccgattttgacaaccttg 17055694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 160 - 263
Target Start/End: Original strand, 18228278 - 18228380
Alignment:
Q  160 tagtagaatcctaaaatagaaaaaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacata 259  Q
    ||||||||||| |||||||  ||||||||||||||||||||| ||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  18228278 tagtagaatcccaaaataggcaaaatccatcaattttgattg-gattttatgatttcttataaattaagttatttatgactatataccatttataacata 18228376  T
Q  260 tatt 263  Q
    ||||    
T  18228377 tatt 18228380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 284 - 439
Target Start/End: Complemental strand, 41032701 - 41032546
Alignment:
Q  284 aaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatc 383  Q
    ||||||||| |||||||||||| ||||||||||||| || ||||||||||||||| |  ||||||||||| ||| ||||||  |||||||||||||| |     
T  41032701 aaaatccatcgattttaattgcgattttacaatttcttatatcgattctacaaaactagttgagtaaaattcttcgattttagttgcgattttacgatta 41032602  T
Q  384 tcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttgg 439  Q
    || |||||||| ||| ||| | |||||||||||| | || ||||||||||||||||    
T  41032601 tcaattttgctcttctctttcaacctgaagtaaaatccctattttgacaaccttgg 41032546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 82 - 221
Target Start/End: Complemental strand, 41032800 - 41032661
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    |||||||||||||||| ||||||||||  || ||| |||||||||| || |||||||||||||   ||||||||||||||||||||| |||||||||  |    
T  41032800 cattgttgtcaaaatctcgacttaaatcgtagaattcaggattttgcgattttcttcaccttcaacgactcaaatccatagtagaattctaaaataggca 41032701  T
Q  182 aaatccatcaattttgattgagattttacgatttcttata 221  Q
    ||||||||| ||||| |||| |||||||| ||||||||||    
T  41032700 aaatccatcgattttaattgcgattttacaatttcttata 41032661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 318 - 435
Target Start/End: Complemental strand, 17197423 - 17197306
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaa 417  Q
    ||||| || ||||||||||||||| ||||||||||||||| ||||||  |||||||||||||| |  ||||||||||| |||||| |||| |||||||||    
T  17197423 tcctacattgattctacaaaagtccttgagtaaaatccttcgattttagttgcgattttacgagttccgattttgctactccctttcgacttgaagtaaa 17197324  T
Q  418 gttccgattttgacaacc 435  Q
    || |||||||||| ||||    
T  17197323 gtcccgattttgataacc 17197306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 82 - 216
Target Start/End: Complemental strand, 17056129 - 17055995
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    |||||| |||||||||| || |||||| ||||||||||||||||||  | ||||| |||||||   |||||| ||||||||||||||  |||||||   |    
T  17056129 cattgtagtcaaaatcctgatttaaatcctaaaatccaggattttgcaattttctccaccttcaacgactcagatccatagtagaattttaaaataagta 17056030  T
Q  182 aaatccatcaattttgattgagattttacgatttc 216  Q
    ||||||||| |||||||||| ||||||||||||||    
T  17056029 aaatccatcgattttgattgcgattttacgatttc 17055995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 301 - 439
Target Start/End: Original strand, 30619160 - 30619296
Alignment:
Q  301 attgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattccc 400  Q
    ||||| ||||||||||||   | |||||||||||||||||  ||||||||||||||| ||||||  |||||| ||||||| | ||||||||||| ||| |    
T  30619160 attgcgattttacaatttttcatatcgattctacaaaagtagttgagtaaaatccttcgatttttgttgcga-tttacgattgtcgattttgctcttctc 30619258  T
Q  401 ttccgacctgaagtaaagttccgattttgacaaccttgg 439  Q
    || |||||||||| ||| | |||||||||||||||||||    
T  30619259 tttcgacctgaag-aaaatcccgattttgacaaccttgg 30619296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 83 - 158
Target Start/End: Original strand, 30619075 - 30619150
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatcc 158  Q
    |||||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||   |||||||||||    
T  30619075 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgcgattttcttcaccttcaacgactcaaatcc 30619150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 324 - 435
Target Start/End: Complemental strand, 12002747 - 12002638
Alignment:
Q  324 atcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccg 423  Q
    ||||||||||||||||||| |||||||||||||| |||||| |||| ||||||  || || | ||||||||| |||||| |||| | || |||||| |||    
T  12002747 atcgattctacaaaagtctatgagtaaaatccttcgatttttattgtgatttt--gagtcccaattttgctactccctttcgacttaaattaaagtcccg 12002650  T
Q  424 attttgacaacc 435  Q
    ||||||||||||    
T  12002649 attttgacaacc 12002638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 83 - 178
Target Start/End: Complemental strand, 14074499 - 14074404
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatag 178  Q
    |||||||||||||||||| ||||||| |||||||  ||||||||| |||||||||||  |||   |||||||||||| ||||||||| ||||||||    
T  14074499 attgttgtcaaaatcccgtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcttaaaatag 14074404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 328 - 402
Target Start/End: Original strand, 16434754 - 16434828
Alignment:
Q  328 attctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattccctt 402  Q
    |||||||||||||  | ||||||||||||| |||||||||||| ||||||||| | |||||||||||||||||||    
T  16434754 attctacaaaagttgtcgagtaaaatccttcgattttgattgcaattttacgattttcgattttgctattccctt 16434828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 82 - 187
Target Start/End: Complemental strand, 18337651 - 18337547
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    |||||||||||||||||||||||| |  ||||||||||||||||||  ||||| |||||||||   ||||||||||||||| |||| || |||||||  |    
T  18337651 cattgttgtcaaaatcccgacttatac-ctaaaatccaggattttgcaactttattcaccttcaacgactcaaatccatagcagaaccccaaaataggca 18337553  T
Q  182 aaatcc 187  Q
    ||||||    
T  18337552 aaatcc 18337547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 343 - 438
Target Start/End: Complemental strand, 27502224 - 27502129
Alignment:
Q  343 ttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    ||||||||||||||| |||||||||||| |||||| || ||||| |||||||||||  |   ||| ||||||||| | ||||||||||||||||||    
T  27502224 ttgagtaaaatccttcgattttgattgcaattttatgagtctcggttttgctattctatgttgacttgaagtaaattcccgattttgacaaccttg 27502129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 414
Target Start/End: Original strand, 22789424 - 22789514
Alignment:
Q  324 atcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagt 414  Q
    ||||| ||||||||||||  | |||||||||||||||||||||||| |||||||||| |  ||||||| ||| ||||||  ||||||||||    
T  22789424 atcgagtctacaaaagtccattagtaaaatcctttgattttgattgtgattttacgatttgcgatttttctaatcccttttgacctgaagt 22789514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 385 - 438
Target Start/End: Complemental strand, 9954823 - 9954770
Alignment:
Q  385 cgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    |||||||||||||||||| |||||| ||||||||| ||||||||||||||||||    
T  9954823 cgattttgctattccctttcgaccttaagtaaagtcccgattttgacaaccttg 9954770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 34478900 - 34478838
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttc 144  Q
    ||||||||| |||||||||||||||||  ||||||   |||||||||||||||||||||||||    
T  34478900 cattgttgttaaaatcccgacttaaatcttaaaatttgggattttgtgactttcttcaccttc 34478838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 431
Target Start/End: Original strand, 8773513 - 8773613
Alignment:
Q  328 attctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattt 427  Q
    ||||||||||| || || ||||||||||||  ||||| ||||||||||||||| ||   ||| |||||||||||| |||| | |||||||||  ||||||    
T  8773513 attctacaaaaatccttaagtaaaatccttcaattttaattgcgattttacgagtc---attctgctattccctttcgactttaagtaaagtctcgattt 8773609  T
Q  428 tgac 431  Q
    ||||    
T  8773610 tgac 8773613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 171
Target Start/End: Complemental strand, 12800710 - 12800622
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcct 171  Q
    |||||||| |||||||| |||||||| |||||||  ||||||||  |||||||||||| |||   |||||||||| |||||| ||||||    
T  12800710 attgttgtgaaaatcccaacttaaatcctaaaatttaggattttacgactttcttcacattcaacgactcaaatctatagtaaaatcct 12800622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 348 - 397
Target Start/End: Complemental strand, 9321599 - 9321550
Alignment:
Q  348 taaaatcctttgattttgattgcgattttacgaatctcgattttgctatt 397  Q
    |||||||||| |||||||||||||||||||||| |  |||||||||||||    
T  9321599 taaaatccttcgattttgattgcgattttacgagttccgattttgctatt 9321550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 357 - 398
Target Start/End: Complemental strand, 12002792 - 12002751
Alignment:
Q  357 ttgattttgattgcgattttacgaatctcgattttgctattc 398  Q
    |||||||||||||||||||||||| || ||||||||||||||    
T  12002792 ttgattttgattgcgattttacgagtcccgattttgctattc 12002751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 12002859 - 12002818
Alignment:
Q  225 taagtcatttatgactatataccatttataacatatatttag 266  Q
    |||||||||||||||||||| | |||||||||||||||||||    
T  12002859 taagtcatttatgactatatgcaatttataacatatatttag 12002818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 364 - 439
Target Start/End: Complemental strand, 13276104 - 13276032
Alignment:
Q  364 tgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttgg 439  Q
    ||||||||||||||||| ||  ||||||||||||| ||| |||||   |||||||| ||||||||||||| |||||    
T  13276104 tgattgcgattttacgagtcctgattttgctattctctttcgacc---agtaaagtcccgattttgacaatcttgg 13276032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 27917578 - 27917520
Alignment:
Q  86 gttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttc 144  Q
    ||||||||||||||||||||||| || ||||| ||||||||| || ||| || ||||||    
T  27917578 gttgtcaaaatcccgacttaaattctgaaatctaggattttgcgattttatttaccttc 27917520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 127
Target Start/End: Original strand, 47785791 - 47785836
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttg 127  Q
    |||||||||||||||||| || ||||| ||||||| ||||||||||    
T  47785791 cattgttgtcaaaatcccaacataaatcctaaaattcaggattttg 47785836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 12003289 - 12003241
Alignment:
Q  86 gttgtcaaaatcccgacttaaatactaaaatccaggattttgtgacttt 134  Q
    ||||||||||||||||||||| |  |||||| |||| ||||||||||||    
T  12003289 gttgtcaaaatcccgacttaagttttaaaattcaggtttttgtgacttt 12003241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 264
Target Start/End: Complemental strand, 27917363 - 27917319
Alignment:
Q  220 taaactaagtcatttatgactatataccatttataacatatattt 264  Q
    |||||| ||| |||||||||||||||| |||||||| ||||||||    
T  27917363 taaactgagttatttatgactatatacgatttataatatatattt 27917319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 183; Significance: 8e-99; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 82 - 439
Target Start/End: Original strand, 8442 - 8797
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    |||||||||||||||||| |||||||| |||||||||| ||||||| ||||||||||||||||   |||| ||||| || ||||||||| ||||||   |    
T  8442 cattgttgtcaaaatccctacttaaatcctaaaatccacgattttgcgactttcttcaccttcaacgacttaaatctattgtagaatcccaaaataagca 8541  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttg 281  Q
    ||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||          |||    
T  8542 aaatccattgattttgattgcgattttacgatttcttataaactaagtcatttatgactatataccatttataccatatatttagtattattttt--ttg 8639  T
Q  282 gtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaa 381  Q
    ||||||||||| |||||| ||||| |||||||||||||||| ||||||||||| ||| |  |||||||||||||||  |||||||||||||||||||||     
T  8640 gtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacgaaaatacttgagtaaaatccttcaattttgattgcgattttacgag 8739  T
Q  382 tctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttgg 439  Q
    |  |||||||| ||||||||| |||||||||||||||| |||||||||| ||||||||    
T  8740 ttccgattttgttattccctttcgacctgaagtaaagtcccgattttgagaaccttgg 8797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 179; Significance: 2e-96; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 83 - 437
Target Start/End: Complemental strand, 44944978 - 44944620
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcac----cttccctgactcaaatccatagtagaatcctaaaatag 178  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||    ||||   || ||||||||||||||||||||||||||||    
T  44944978 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcactcaccttcaacgattcaaatccatagtagaatcctaaaatag 44944879  T
Q  179 aaaaaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnng 278  Q
      |||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||              
T  44944878 tcaaaatccatcgattttgattgggattttactatttcttataaactaagtcatttatgactatataccatttataacatatatttagtattattatttt 44944779  T
Q  279 ttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttac 378  Q
    |||||||| || || |||||| ||||| ||||||||||||| || |||||||||||||||||| || ||||||||  || |||||| |||||||||||||    
T  44944778 ttggtaaagtctatcgattttgattgcgattttacaatttcttatatcgattctacaaaagtccttaagtaaaattgttcgattttaattgcgattttac 44944679  T
Q  379 gaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaacctt 437  Q
    || || ||  ||||||||| |||| ||| |||||||||||| |||||||||||||||||    
T  44944678 gagtcccgcatttgctatttcctttcgatctgaagtaaagtcccgattttgacaacctt 44944620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 84 - 437
Target Start/End: Original strand, 5058530 - 5058882
Alignment:
Q  84 ttgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaa 183  Q
    ||||||||||||||||||||||||| ||||||| ||| |||||| || |||||||||||||   |||  ||||||||||||||||| ||||||||  |||    
T  5058530 ttgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgattttcttcaccttcaacgacctaaatccatagtagaatcttaaaataggcaaa 5058629  T
Q  184 atccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttggt 283  Q
    ||||  | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||    
T  5058630 atcctacgattttgattgcgattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtattattattttttggt 5058729  T
Q  284 aaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatc 383  Q
    ||| ||||| |||||| ||||| ||||||||||||  || |||||||| |||||| || |||| |||||||||| |||||||||||| |||||||||||     
T  5058730 aaagtccatcgattttgattgcgattttacaattttttatatcgattc-acaaaattccttgattaaaatccttcgattttgattgcaattttacgaatt 5058828  T
Q  384 tcgattttgctattcccttccgacctgaagtaaagttccgattttgacaacctt 437  Q
     ||||||||||||||||||  || |||||||||||| |||||||||||||||||    
T  5058829 ccgattttgctattcccttttgatctgaagtaaagtcccgattttgacaacctt 5058882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 121 - 437
Target Start/End: Original strand, 17811385 - 17811702
Alignment:
Q  121 gattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaaatccatcaattttgattgagattttacgatttcttat 220  Q
    |||||||||||||| |||||||||   |||||||||||||||||||||  ||||||||| |||||| ||| |||||||||| ||||||||||||||||||    
T  17811385 gattttgtgacttttttcaccttcaacgactcaaatccatagtagaattttaaaatagacaaaatcgatcgattttgattgcgattttacgatttcttat 17811484  T
Q  221 aaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttgg-taaaatccattgattttaattgctattttacaatttc 319  Q
    |||||||||||||||| | |||||||||||||||| ||||||||| ||          |||| |||||||||| |||||| ||||| ||||||||||||     
T  17811485 aaactaagtcatttataattatataccatttataaaatatatttaatattaatattttttgggtaaaatccatcgattttgattgcgattttacaatttt 17811584  T
Q  320 ctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagt 419  Q
    ||| |||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||    
T  17811585 ctatatcgattctacaaaagtccttgagtaaaatctttcgattttgattgcgattttacgaatcccgattttgctattcccttttgacctgaagtaaagt 17811684  T
Q  420 tccgattttgacaacctt 437  Q
     |||||||||||||||||    
T  17811685 cccgattttgacaacctt 17811702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 82 - 430
Target Start/End: Original strand, 27221417 - 27221762
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||| |||||||| |||||||| ||||||| |||||||||| ||||||||||| ||||   ||||||||| |||||||||||| |||||| |  |    
T  27221417 cattgttgttaaaatcccaacttaaattctaaaattcaggattttgcgactttcttcatcttcaacgactcaaatacatagtagaatcttaaaattggca 27221516  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttg 281  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||           |||    
T  27221517 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatatagt----tttttttttg 27221612  T
Q  282 gtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaa 381  Q
    ||| ||||  | |||||||||||| |||||||||||||||| |||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||    
T  27221613 gtacaatcagtcgattttaattgcgattttacaatttcctacatcgattctacaaaagtctccgagtaaaatccttcgattttgattgcgattttacgaa 27221712  T
Q  382 tctcgattttgctattcccttccgacct-gaagtaaagttccgattttga 430  Q
    || |||||||||||| | ||| ||||||  ||||||||| ||||||||||    
T  27221713 tcccgattttgctatactctttcgacctaaaagtaaagtcccgattttga 27221762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 82 - 377
Target Start/End: Complemental strand, 24725607 - 24725307
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||||||||||| ||||||||| |||||||||| ||||||  ||||||||||||||||    |||||||||||||||||||||  |||||||  |    
T  24725607 cattgttgtcaaaatccagacttaaatcctaaaatccaagattttacgactttcttcaccttcaacaactcaaatccatagtagaatcgcaaaataggca 24725508  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngtt- 280  Q
    |||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||     
T  24725507 aaatccatcaattttgattacgatttgacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtattattttattttt 24725408  T
Q  281 ----ggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgatttt 376  Q
        |||||||||||| |||||| ||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24725407 tttgggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatcctttgattttgattgcgatttt 24725308  T
Q  377 a 377  Q
    |    
T  24725307 a 24725307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 83 - 438
Target Start/End: Original strand, 4247356 - 4247711
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaa 182  Q
    ||||||||||||||||| | |||||| ||||||| ||||||||||| ||||||||||| |||    ||| |||||||||||||||||| |||||||  ||    
T  4247356 attgttgtcaaaatcccaatttaaatcctaaaattcaggattttgtaactttcttcactttcaacaacttaaatccatagtagaatcccaaaataggcaa 4247455  T
Q  183 aatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttgg 282  Q
    ||| |||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||          | ||    
T  4247456 aattcatcgattttgattgcgattttatgatttcttataaactaagtcatttatgactatatatcatttgtaacatatatttagtattattttttttagg 4247555  T
Q  283 taaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaat 382  Q
    |||||||||| |||||| ||||| ||||||  ||||| || ||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||    
T  4247556 taaaatccatcgattttgattgcgattttatgatttcttatatcgattctacaaaaatccttgagtaaaatcctttgaatttgattgcgattttacgaat 4247655  T
Q  383 ctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    | | |||||  ||||||||| |||| ||||||||||| || |||||||||| ||||    
T  4247656 cccaatttttgtattccctttcgacttgaagtaaagtcccaattttgacaatcttg 4247711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 82 - 437
Target Start/End: Original strand, 14055250 - 14055610
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||| |||||||| ||||| || |||||||||| ||||||| ||||||||||||||||   |||||||||| |||||||||| |||||||||  |    
T  14055250 cattgttgtgaaaatccccacttatatcctaaaatccaagattttgcgactttcttcaccttcaacgactcaaatctatagtagaattctaaaataggca 14055349  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagta------nnnnnnn 275  Q
    ||||||||  |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||                 
T  14055350 aaatccatagattttgattgcgattttacgacttcttataaactaagtcatttatgactatataccatttataacatatatttaatattatctttttttt 14055449  T
Q  276 nngttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattt 375  Q
      |||||||||||||||||||||| ||||| ||||| ||||||| || |||| ||||||||||||  ||||||||||||||| ||||||| |||||||||    
T  14055450 ttgttggtaaaatccattgattttgattgcgattttgcaatttcttatatcgtttctacaaaagtagttgagtaaaatccttcgattttggttgcgattt 14055549  T
Q  376 tacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaacctt 437  Q
    ||| | | |||||||||||  || ||| |||||||||| |||  ||||||||||||||||||    
T  14055550 taccattgtcgattttgctcatctctttcgacctgaagcaaa-atccgattttgacaacctt 14055610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 82 - 437
Target Start/End: Original strand, 14365278 - 14365638
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||| |||||||| ||||| || |||||||||| ||||||| ||||||||||||||||   |||||||||| |||||||||| |||||||||  |    
T  14365278 cattgttgtgaaaatccccacttatatcctaaaatccaagattttgcgactttcttcaccttcaacgactcaaatctatagtagaattctaaaataggca 14365377  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagta------nnnnnnn 275  Q
    ||||||||  |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||                 
T  14365378 aaatccatagattttgattgcgattttacgacttcttataaactaagtcatttatgactatataccatttataacatatatttaatattatctttttttt 14365477  T
Q  276 nngttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattt 375  Q
      |||||||||||||||||||||| ||||| ||||| ||||||| || |||| ||||||||||||  ||||||||||||||| ||||||| |||||||||    
T  14365478 ttgttggtaaaatccattgattttgattgcgattttgcaatttcttatatcgtttctacaaaagtagttgagtaaaatccttcgattttggttgcgattt 14365577  T
Q  376 tacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaacctt 437  Q
    ||| | | |||||||||||  || ||| |||||||||| |||  ||||||||||||||||||    
T  14365578 taccattgtcgattttgctcatctctttcgacctgaagcaaa-atccgattttgacaacctt 14365638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 89 - 435
Target Start/End: Complemental strand, 20571002 - 20570662
Alignment:
Q  89 gtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaaatcca 188  Q
    |||||| ||||||||||||| || ||||||| ||||||||||||||||||| || ||       ||||| |||||||||||  |||||||| ||||||||    
T  20571002 gtcaaactcccgacttaaattctgaaatccaagattttgtgactttcttcatctacct------aaatctatagtagaatctaaaaatagacaaaatcca 20570909  T
Q  189 tcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttggtaaaat 288  Q
    || ||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||          |||||||| |    
T  20570908 tcgattttgattgcaattttacgatttcttataaaataagtcatttatgactatataccatttataacatatatttagtattattcttttttggtaaagt 20570809  T
Q  289 ccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgat 388  Q
    |||| |||||| ||||  |||||| |||||| || |||||||||||||||||| |||||||||||| ||  |||||||||||||||||| || |||| ||    
T  20570808 ccatcgattttgattgtgattttataatttcttatatcgattctacaaaagtccttgagtaaaatctttcaattttgattgcgattttatgagtctcaat 20570709  T
Q  389 tttgctattcccttccgacctgaagtaaagttccgattttgacaacc 435  Q
    |||| ||||||||| | |||||||||| ||| |||||||||||||||    
T  20570708 tttgttattccctttcaacctgaagtagagtcccgattttgacaacc 20570662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 82 - 380
Target Start/End: Complemental strand, 8330175 - 8329876
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||||||||||| ||| ||||| ||||||| || ||||||| ||||||||||||||||   || |||||||||||||||||||| ||||||| ||    
T  8330175 cattgttgtcaaaatcctgacctaaattctaaaattcatgattttgcgactttcttcaccttcaacgattcaaatccatagtagaatcccaaaataggaa 8330076  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatttagtannnnnnnnngtt 280  Q
    |||| |||  ||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||| ||          ||    
T  8330075 aaattcattgattttaattgcgattttacgattttttataaactaagtcatttatgactatataccattttataacatatacttattatttatttttttt 8329976  T
Q  281 ggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacga 380  Q
    ||||||||||||||||||| ||||| ||||||| ||||| || ||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  8329975 ggtaaaatccattgattttgattgcaattttacgatttcttatatcaattctacaaaagtagttgagtaaaatcctttgattttgattgcgattttacga 8329876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 83 - 437
Target Start/End: Original strand, 5715290 - 5715635
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaa 182  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| |||||| | |||||||    ||| |||| ||||||||||| | ||||||   ||    
T  5715290 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgacttt-tacaccttcaacaacttaaattcatagtagaattccaaaataagcaa 5715388  T
Q  183 aatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttgg 282  Q
    ||| |||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |           ||||    
T  5715389 aattcatcgattttgattgtgattttacgatttcttataaactaagtcatttatgattatataccatttataacatatattcatt----tttttttttgg 5715484  T
Q  283 taaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaat 382  Q
    |||||| ||| |||||| ||||| |||||| ||||||||| |||||||||||||||||| ||||||||||||| | |||||||||||||||||||||| |    
T  5715485 taaaattcatcgattttgattgcgattttataatttcctatatcgattctacaaaagtccttgagtaaaatccctcgattttgattgcgattttacgagt 5715584  T
Q  383 ctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaacctt 437  Q
    | ||||||| ||||| |||| ||||    |||||||| |||||||||||||||||    
T  5715585 cccgatttttctatttcctttcgac----agtaaagtcccgattttgacaacctt 5715635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 85 - 380
Target Start/End: Complemental strand, 8346660 - 8346363
Alignment:
Q  85 tgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaaa 184  Q
    |||||||||||||| ||| |||||| ||||||  ||||||||| ||||||||||||||||   ||||||||||||||||||||||| ||||||| |||||    
T  8346660 tgttgtcaaaatcctgacctaaatattaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataggaaaaa 8346561  T
Q  185 tccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatttagta-nnnnnnnnngttgg 282  Q
    |||||| ||||| |||| |||||||||||||||||||||||||||||| |||| ||||||| || ||||||||||||||||||||           ||||    
T  8346560 tccatcgattttaattgcgattttacgatttcttataaactaagtcatctatgtctatatatcattttataacatatatttagtattattatttttttgg 8346461  T
Q  283 taaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacga 380  Q
    ||||||||||||||| | ||||  ||||||  ||||| || ||| |||||||||||||  ||||||||||||||||||||||||||||||| ||||||    
T  8346460 taaaatccattgattatgattgagattttatgatttcttatatcaattctacaaaagtagttgagtaaaatcctttgattttgattgcgatattacga 8346363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 80 - 434
Target Start/End: Complemental strand, 8343932 - 8343580
Alignment:
Q  80 accattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaataga 179  Q
    ||||||||||||||||||  | | ||||| ||||||||| |||||||| ||||||||||||||||   ||||||||||||||||||||||| ||||||      
T  8343932 accattgttgtcaaaatcttggcctaaatcctaaaatcctggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatatg 8343833  T
Q  180 aaaaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatttagtannnnnnnnng 278  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||| ||||||||| |||||||  |||||||||||              
T  8343832 aaaaatccatcaattttaattgcgattttacgatttcttataaactaagtcatctatgattatataccattttataagttatatttagtattattat--- 8343736  T
Q  279 ttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttac 378  Q
    ||  ||||||||||||| ||| ||||| ||||||| ||||  || ||| |||||||||||||  ||||||||||| ||| ||||||||||||  ||||||    
T  8343735 tttttaaaatccattgactttgattgcgattttacgattttttatatcaattctacaaaagtagttgagtaaaatacttcgattttgattgcatttttac 8343636  T
Q  379 gaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaac 434  Q
    || | || |||||| | ||| ||| |||||||||| ||| ||| |||||| |||||    
T  8343635 gattgtcaattttgttcttctctttcgacctgaagcaaaattctgattttaacaac 8343580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 83 - 268
Target Start/End: Complemental strand, 24990200 - 24990015
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaa 182  Q
    |||||||||||||| ||||||||||| | |||||  ||||||||||||||||||| |||| |   |||||||||||||||||||||||||||||||  ||    
T  24990200 attgttgtcaaaattccgacttaaatccaaaaatttaggattttgtgactttctttacctccaacgactcaaatccatagtagaatcctaaaataggcaa 24990101  T
Q  183 aatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagta 268  Q
    |||||||| ||||||||||  |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  24990100 aatccatcgattttgattgcaattttacgatttcttataaactaaatcatttatgactatatactatttataacatatatttagta 24990015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 80 - 266
Target Start/End: Complemental strand, 26281441 - 26281256
Alignment:
Q  80 accattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaataga 179  Q
    ||||||||||||||||| |||||||||||  |||||| |||||||||| ||||||||||||||||   ||||||||||||| ||||||| | ||||||      
T  26281441 accattgttgtcaaaattccgacttaaatcataaaattcaggattttgcgactttcttcaccttcaacgactcaaatccattgtagaattccaaaataag 26281342  T
Q  180 aaaaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttag 266  Q
     |||||||||| |||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26281341 caaaatccatcgattttg-ttgcgatttaacgatttcttataaactaagtcatttatgactatataccatttataacttatatttag 26281256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 92 - 438
Target Start/End: Original strand, 11324988 - 11325333
Alignment:
Q  92 aaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaaatccatca 191  Q
    ||||||||||||||||| ||||||| || ||||||| || |||||||||||||   |||||||||||||| |||||| |||||||||  ||||| ||| |    
T  11324988 aaaatcccgacttaaatcctaaaattcatgattttgggattttcttcaccttcaacgactcaaatccataatagaattctaaaataggcaaaattcat-a 11325086  T
Q  192 attttgattgagattttacgatttcttataaactaagtcatttatgactatatacc----atttataacatatatttagtannnnnnnnngttggtaaaa 287  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||||    |||||||||  |||||||||           |||||||||    
T  11325087 attttgattgcgaatttacgatttcttataaactaagtcatttatgactatataccaattatttataac--atatttagt-ttttttttttttggtaaaa 11325183  T
Q  288 tccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcga 387  Q
    ||||| |||||| ||||  |||||||||||| ||| ||| ||| |||| ||||  |||||||||| ||||  | |||| |||||||||||||| | ||||    
T  11325184 tccatcgattttgattgtaattttacaattt-ctatatcaattttacagaagtagttgagtaaaacccttgaaatttggttgcgattttacgattgtcga 11325282  T
Q  388 ttttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    ||||||| ||| |||  ||| ||||| ||  | || |||||||||||||||    
T  11325283 ttttgctcttctcttttgacgtgaagcaagatcccaattttgacaaccttg 11325333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 279 - 437
Target Start/End: Complemental strand, 24989706 - 24989549
Alignment:
Q  279 ttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttac 378  Q
    |||||||||||||| |||||| ||||| |||||| ||||||||| |||||||||||||||||| || |||||||||||| |||||||||||| |||||||    
T  24989706 ttggtaaaatccatcgattttgattgcgattttataatttcctatatcgattctacaaaagtcctt-agtaaaatccttcgattttgattgccattttac 24989608  T
Q  379 gaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaacctt 437  Q
    || || |||||||| ||||||||| |||||| ||||||||| |||||||||||||||||    
T  24989607 gagtcccgattttgttattccctttcgacctaaagtaaagtcccgattttgacaacctt 24989549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 82 - 236
Target Start/End: Complemental strand, 7730472 - 7730319
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||||||||||| ||||||||| |||||||||||| ||||| |||||||||||||||     ||||||||||| |||||||| | ||||||| ||    
T  7730472 cattgttgtcaaaatcctgacttaaatcctaaaatccagg-ttttgcgactttcttcacctttaacaactcaaatccacagtagaattccaaaataggaa 7730374  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttat 236  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  7730373 aaatccatcgattttgattgagattttacgatttcttataaactaaatcatttat 7730319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 83 - 373
Target Start/End: Original strand, 6916786 - 6917068
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaa 182  Q
    ||||||||||||||||||| ||||||  | ||||  ||||||||| || ||| ||    |  |||||||||||| ||||||||||| ||||||  |  ||    
T  6916786 attgttgtcaaaatcccgatttaaatcttgaaatttaggattttgcgattttttt----tcacctgactcaaattcatagtagaattctaaaa--gttaa 6916879  T
Q  183 aatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttgg 282  Q
    ||||||||  ||||||||| ||||||||||||||||||||| |||||||||||||||| ||| ||| |||||||||||||||| ||         |||||    
T  6916880 aatccatcggttttgattgcgattttacgatttcttataaattaagtcatttatgact-tattccagttataacatatatttaatatatttttttgttgg 6916978  T
Q  283 taaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgat 373  Q
    |||||| ||| |||||| ||||| |||||| |||||| || ||||||| ||  |||||  |||||||||||||||  ||||||||||||||    
T  6916979 taaaattcatcgattttgattgcaattttataatttcttatatcgatt-tatgaaagtagttgagtaaaatccttcaattttgattgcgat 6917068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 82 - 236
Target Start/End: Complemental strand, 9685374 - 9685220
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    |||||||||||||||| ||||||| || |||||||  ||||||||| |||||| |||||||||   |||||||||||||| ||||||   |||||||| |    
T  9685374 cattgttgtcaaaatctcgacttatatcctaaaatttaggattttgcgacttttttcaccttcaacgactcaaatccatattagaatttcaaaatagaca 9685275  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttat 236  Q
    ||||||||| ||||| |||| ||||||| ||||||||||||||||||||||||||    
T  9685274 aaatccatcgattttaattgcgattttatgatttcttataaactaagtcatttat 9685220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 83 - 245
Target Start/End: Complemental strand, 22687793 - 22687631
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaa 182  Q
    |||||||||||||||||||||||||| ||||||| ||||| |||| ||||||||||| ||||    |||||||||||| | ||||||| |||||||  ||    
T  22687793 attgttgtcaaaatcccgacttaaatcctaaaattcaggaatttgcgactttcttcaacttcaacaactcaaatccatcgcagaatcccaaaataggcaa 22687694  T
Q  183 aatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatata 245  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||  | || |||||||||||    
T  22687693 aatccatcgattttgattgcgattttacgatttcttacaaactaaaaccttgatgactatata 22687631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 90 - 207
Target Start/End: Original strand, 8571250 - 8571367
Alignment:
Q  90 tcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaaatccat 189  Q
    |||||||||||||||||||  ||||||||||||||||| |||||||||||||||    |||||||||||||||||||||||||||||||| |||| ||||    
T  8571250 tcaaaatcccgacttaaatcataaaatccaggattttgcgactttcttcacctttaacgactcaaatccatagtagaatcctaaaatagagaaaaaccat 8571349  T
Q  190 caattttgattgagattt 207  Q
    | |||||||||| |||||    
T  8571350 cgattttgattgcgattt 8571367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 83 - 221
Target Start/End: Original strand, 11326386 - 11326524
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaa 182  Q
    ||||||||||||||||| |||||||| |||||||  ||||||||| ||||||||||||||||   |||| ||||||||||||||||| ||||||||  ||    
T  11326386 attgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcagcgactaaaatccatagtagaatcttaaaataggcaa 11326485  T
Q  183 aatccatcaattttgattgagattttacgatttcttata 221  Q
    |||| ||| |||||||||| |||||||| ||||| ||||    
T  11326486 aatctatcgattttgattgcgattttacaatttcctata 11326524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 284 - 438
Target Start/End: Original strand, 11326484 - 11326638
Alignment:
Q  284 aaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatc 383  Q
    |||||| || |||||| ||||| |||||||||||||||| || ||||| ||||||||| ||||||||||| |||  |||||||||| ||||||| || ||    
T  11326484 aaaatctatcgattttgattgcgattttacaatttcctatattgattccacaaaagtccttgagtaaaatacttcaattttgattgtgattttaagagtc 11326583  T
Q  384 tcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
     | |||||||||||| ||| | ||||||| |||||||| ||||||||||||||||    
T  11326584 ccaattttgctattctctttccacctgaaataaagttctgattttgacaaccttg 11326638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 82 - 221
Target Start/End: Original strand, 39182259 - 39182397
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    |||||||| |||||||| ||||||||| |||||||| ||||||||| ||||| ||||||||||   |||| |||||||||||||||||| |||||||  |    
T  39182259 cattgttgacaaaatcctgacttaaatcctaaaatctaggattttgcgactt-cttcaccttcaacgactgaaatccatagtagaatcccaaaataggca 39182357  T
Q  182 aaatccatcaattttgattgagattttacgatttcttata 221  Q
    ||||||||| |||||| ||| |||||||| ||||||||||    
T  39182358 aaatccatcgattttggttgcgattttacaatttcttata 39182397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 284 - 439
Target Start/End: Original strand, 39182357 - 39182512
Alignment:
Q  284 aaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatc 383  Q
    ||||||||| ||||||  |||| ||||||||||||| || |||||||||||||||||  ||||||||||||||| ||||||| |||||||||||||| |     
T  39182357 aaaatccatcgattttggttgcgattttacaatttcttatatcgattctacaaaagtagttgagtaaaatccttcgattttggttgcgattttacgattg 39182456  T
Q  384 tcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttgg 439  Q
    |||||||| || ||| |||  || |||||| ||| |  ||||||||||||||||||    
T  39182457 tcgatttttctcttctctttggaactgaagcaaaatcacgattttgacaaccttgg 39182512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 318 - 435
Target Start/End: Original strand, 8304321 - 8304438
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaa 417  Q
    ||||| ||| |||||||||||||| ||||||||||||||| ||||||||||| |||||||||| || ||||||||||| || ||| |||| |||||||||    
T  8304321 tcctatatcaattctacaaaagtccttgagtaaaatccttcgattttgattgtgattttacgagtcgcgattttgctactctctttcgacttgaagtaaa 8304420  T
Q  418 gttccgattttgacaacc 435  Q
    ||  ||||||||||||||    
T  8304421 gtctcgattttgacaacc 8304438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 80 - 438
Target Start/End: Complemental strand, 26617608 - 26617251
Alignment:
Q  80 accattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccata--gtagaatcctaaaata 177  Q
    ||||||||| | ||||| | ||||| ||| ||||||| |||||||||| |||||| |||||||||   |||  |||| ||||  ||||||| ||||||||    
T  26617608 accattgttttgaaaattctgactttaatcctaaaattcaggattttgcgacttttttcaccttcaacgacataaattcatatagtagaattctaaaata 26617509  T
Q  178 gaa--aaaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnn 275  Q
     |   |||||| ||| |||||||||| ||||||||||  |||| || ||||||||||||||||||||    ||||||||||||||||||||||           
T  26617508 taggcaaaatctatcgattttgattgcgattttacgagatcttgtagactaagtcatttatgactat----catttataacatatatttagtattatttt 26617413  T
Q  276 nngttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattt 375  Q
       || |||||||| || |||||| ||||| ||||||||||||  || |||  |||||||||| |  ||||| |||||||||||| |||  |||||||||    
T  26617412 tt-tttgtaaaatcaatcgattttgattgcgattttacaattttttatatcctttctacaaaaataattgagcaaaatcctttgaatttagttgcgattt 26617314  T
Q  376 tacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    | ||| |  || |||||| |||  | |  ||||||||| ||| |||| |||||||||||||||    
T  26617313 ttcgattggcggttttgcaattatcatttgacctgaagcaaaattccaattttgacaaccttg 26617251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 103 - 241
Target Start/End: Complemental strand, 27510052 - 27509914
Alignment:
Q  103 ttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaaatccatcaattttgattga 202  Q
    |||||| |||||||  ||||||||| || ||||||||| | |   || ||||||| ||||||||||   |||||||  ||||| |||||||||||||||     
T  27510052 ttaaattctaaaataaaggattttgcgattttcttcacatccaacgattcaaatctatagtagaatttaaaaataggcaaaattcatcaattttgattgc 27509953  T
Q  203 gattttacgatttcttataaactaagtcatttatgacta 241  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27509952 gattttacgatttcttataaactaagtcatttatgacta 27509914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 307 - 436
Target Start/End: Complemental strand, 9685199 - 9685070
Alignment:
Q  307 attttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccga 406  Q
    |||||| ||||| ||| |||||||||| ||||||| | ||||||||||||| |||||| ||||||||||||||| ||| |||||||||||||| || |||    
T  9685199 attttaaaattttctaaatcgattctataaaagtcctcgagtaaaatccttcgattttaattgcgattttacgagtcttgattttgctattccttttcga 9685100  T
Q  407 cctgaagtaaagttccgattttgacaacct 436  Q
    || |||||||||| | ||| || |||||||    
T  9685099 ccagaagtaaagtccggatctttacaacct 9685070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 318 - 439
Target Start/End: Complemental strand, 25842625 - 25842504
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaa 417  Q
    ||||| |||||||||||||||||   |||||||||||||   ||||||||||||||||||||| || ||||||||||| |||||| |||| |||||||||    
T  25842625 tcctacatcgattctacaaaagttcatgagtaaaatcctccaattttgattgcgattttacgagtcccgattttgctactccctttcgacttgaagtaaa 25842526  T
Q  418 gttccgattttgacaaccttgg 439  Q
    || || ||||||| ||||||||    
T  25842525 gtcccaattttgataaccttgg 25842504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 83 - 411
Target Start/End: Complemental strand, 21846554 - 21846248
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaa 182  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| |||||| ||||| |||   |||||| |||||||||||||| |||||| ||  ||    
T  21846554 attgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgacttt-ttcacattcaacgactcacatccatagtagaattctaaaacaggtaa 21846456  T
Q  183 aatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttgg 282  Q
    |||| ||| |||||||||| ||                    ||||||||||||||||||||| ||||||||||||||||||| ||          | ||    
T  21846455 aatcaatcgattttgattgcga--------------------taagtcatttatgactatatatcatttataacatatatttaatattatttatt-tggg 21846377  T
Q  283 taaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaat 382  Q
    ||||||||||  ||||| ||||  ||||||| ||||| || |||||||||| ||||||  |||| |||||||||| ||||||| ||||||||||| || |    
T  21846376 taaaatccatcaattttgattgtgattttacgatttcttatatcgattctataaaagtagttgattaaaatccttcgattttggttgcgattttaggatt 21846277  T
Q  383 ctcgattttgctattcccttccgacctga 411  Q
     | ||||||||| | | ||| ||||||||    
T  21846276 tttgattttgctctcctctttcgacctga 21846248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 318 - 436
Target Start/End: Original strand, 4574965 - 4575083
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaa 417  Q
    ||||| |||||||||||||||||  ||||||| ||| |||||||||||||||||||||||||| | | |||||| |||||||||| | |||||||| |||    
T  4574965 tcctatatcgattctacaaaagtagttgagtagaattctttgattttgattgcgattttacgatttttgattttactattccctttcaacctgaagaaaa 4575064  T
Q  418 gttccgattttgacaacct 436  Q
     |  | |||||||||||||    
T  4575065 atctcaattttgacaacct 4575083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 220 - 437
Target Start/End: Complemental strand, 26565540 - 26565323
Alignment:
Q  220 taaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttggtaaaatccattgattttaattgctattttacaatttc 319  Q
    |||||| ||||||||||||||||||||  ||||||||||||||| |             ||||||||||||||  ||||| ||||| ||||||| ||||     
T  26565540 taaactgagtcatttatgactatatacagtttataacatatattaacattatttttgttttggtaaaatccatcaattttgattgcaattttacgatttt 26565441  T
Q  320 ctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagt 419  Q
     || || ||||||||||||||  ||||||||||||||| |||||||||| ||||||||||| | ||| ||||| | |||||||   |||||||| ||  |    
T  26565440 ttatattgattctacaaaagtagttgagtaaaatccttcgattttgattacgattttacgattttcgtttttgttcttcccttttaacctgaagaaagat 26565341  T
Q  420 tccgattttgacaacctt 437  Q
     || ||||||||||||||    
T  26565340 cccaattttgacaacctt 26565323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 315 - 437
Target Start/End: Complemental strand, 22687164 - 22687042
Alignment:
Q  315 atttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagt 414  Q
    ||||| || |||||||||||||||||  ||||||||||| |||  |||||| ||| |||||||||| ||||||||||||| ||| ||| ||| ||||||     
T  22687164 atttcttatatcgattctacaaaagtagttgagtaaaattcttcaattttggttgtgattttacgattctcgattttgctcttctctttcgatctgaagc 22687065  T
Q  415 aaagttccgattttgacaacctt 437  Q
    ||| | |||||||| ||||||||    
T  22687064 aaaatcccgattttaacaacctt 22687042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 281 - 438
Target Start/End: Original strand, 8572336 - 8572491
Alignment:
Q  281 ggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacga 380  Q
    ||||||||||||||||||| ||||| |||||| ||||| ||| ||| |||||||||| ||| |||| ||| ||| || |||||||||||||| |||| ||    
T  8572336 ggtaaaatccattgattttgattgcaattttataattt-ctatatcaattctacaaatgtccttgattaacatctttcgattttgattgcga-tttaaga 8572433  T
Q  381 atctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
     || | || || |||||||||| |||| |||  |||||| || |||||||||||||||    
T  8572434 gtcccaatattactattccctttcgacttgagataaagtcccaattttgacaaccttg 8572491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 324 - 437
Target Start/End: Complemental strand, 23618317 - 23618204
Alignment:
Q  324 atcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccg 423  Q
    |||||||||||||||||| ||||||||||| ||| ||||||||||||||||||  || || ||||||||||| |||||| | || | |||||||||   |    
T  23618317 atcgattctacaaaagtccttgagtaaaattcttcgattttgattgcgattttcggagtcccgattttgctactccctttcaacttaaagtaaagtcttg 23618218  T
Q  424 attttgacaacctt 437  Q
    ||||||| ||||||    
T  23618217 attttgataacctt 23618204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 30294175 - 30294251
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatag 162  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||| ||| |||||||||   |||||||||||||||    
T  30294175 attgttgtcaaaatcccaacttaaatcctaaaatccaggattttgtgattttattcaccttc---gactcaaatccatag 30294251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 282 - 398
Target Start/End: Complemental strand, 8329909 - 8329793
Alignment:
Q  282 gtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaa 381  Q
    ||||||||| |||||||| ||||| ||||||| ||||| || ||| |||||||||||||  |||||||||||||||  ||||||||||| |||||| ||     
T  8329909 gtaaaatcctttgattttgattgcgattttacgatttcttatatcaattctacaaaagtagttgagtaaaatccttcaattttgattgcaattttatgat 8329810  T
Q  382 tctcgattttgctattc 398  Q
    | || |||||| |||||    
T  8329809 tgtcaattttgttattc 8329793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 294 - 413
Target Start/End: Original strand, 1977760 - 1977878
Alignment:
Q  294 gattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgc 393  Q
    |||||| ||||| ||||||  ||||| || |||||||||| |||| |  ||||||||||||||| |||||||||||||||||||||| | |||||||| |    
T  1977760 gattttgattgcgattttaggatttcttatatcgattctaaaaaa-taattgagtaaaatccttcgattttgattgcgattttacgattgtcgatttttc 1977858  T
Q  394 tattcccttccgacctgaag 413  Q
    | ||| ||| ||||||||||    
T  1977859 tcttctctttcgacctgaag 1977878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 439
Target Start/End: Complemental strand, 1981217 - 1981098
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaa 417  Q
    ||||| ||||||||||| |||| | ||||||||  ||||| |||||||||| ||||||||||| |  | ||||| ||| |||||| |||| |||||||||    
T  1981217 tcctatatcgattctactaaagaccttgagtaa--tccttcgattttgattacgattttacgagttccaatttttctaatccctttcgacttgaagtaaa 1981120  T
Q  418 gttccgattttgacaaccttgg 439  Q
    || |||||||||| ||||||||    
T  1981119 gtcccgattttgataaccttgg 1981098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 278 - 380
Target Start/End: Complemental strand, 7730293 - 7730191
Alignment:
Q  278 gttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgatttta 377  Q
    |||||||||||||||  ||||| ||||| ||||||||||||| || ||| ||| |||||||||  |||||||||| | || ||||||| |||||||||||    
T  7730293 gttggtaaaatccatcaattttgattgcgattttacaatttcttatatcaattatacaaaagtagttgagtaaaaccattcgattttggttgcgatttta 7730194  T
Q  378 cga 380  Q
    |||    
T  7730193 cga 7730191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 359 - 438
Target Start/End: Complemental strand, 10285756 - 10285677
Alignment:
Q  359 gattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    |||||||||||||||||||||| | | |||||| || ||| ||| |||||||||||||| | ||||||||||||||||||    
T  10285756 gattttgattgcgattttacgattgttgatttttctcttctctttcgacctgaagtaaaatcccgattttgacaaccttg 10285677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 1977717 - 1977790
Alignment:
Q  148 gactcaaatccatagtagaatcctaaaatagaaaaaatccatcaattttgattgagattttacgatttcttata 221  Q
    ||||||||||||||||||||||||||||||   ||||| | || |||||||||| ||||||| |||||||||||    
T  1977717 gactcaaatccatagtagaatcctaaaatatgcaaaattcgtcgattttgattgcgattttaggatttcttata 1977790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 282 - 434
Target Start/End: Complemental strand, 8346396 - 8346244
Alignment:
Q  282 gtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaa 381  Q
    ||||||||| |||||||| ||||| || |||| ||||| || ||| |||||| ||||||  ||||||||||||||| ||||||| ||||  | ||||||     
T  8346396 gtaaaatcctttgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaatccttcgattttgtttgcattcttacgat 8346297  T
Q  382 tctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaac 434  Q
    | || |||||| | ||| ||| ||||| |||||||| | | |||||| |||||    
T  8346296 tgtcaattttgttcttctctttcgaccggaagtaaaatcctgattttaacaac 8346244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 438
Target Start/End: Complemental strand, 8254037 - 8253958
Alignment:
Q  359 gattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    |||||||||||||||||||||| |||||||||||||| |||||| |||  | |||||||||  | ||||||| |||||||    
T  8254037 gattttgattgcgattttacgagtctcgattttgctactccctttcgatttaaagtaaagtatcaattttgataaccttg 8253958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 417
Target Start/End: Original strand, 17741886 - 17741980
Alignment:
Q  325 tcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattc--ccttccgacctgaagtaaa 417  Q
    ||||||||| ||||||  || ||||||||||||  ||||||||||| ||||||||| | |||||||||||||||   ||| ||||||||||||||    
T  17741886 tcgattctaaaaaagtagttaagtaaaatccttcaattttgattgcaattttacgattttcgattttgctattctttctttcgacctgaagtaaa 17741980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 279 - 357
Target Start/End: Complemental strand, 27509345 - 27509267
Alignment:
Q  279 ttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctt 357  Q
    ||||||||||| || || ||| ||||| ||||||||||||| || |||||||||| ||||||  |||||||||||||||    
T  27509345 ttggtaaaatcaatcgaattttattgcgattttacaatttcttatatcgattctataaaagtagttgagtaaaatcctt 27509267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 21157587 - 21157475
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaa 417  Q
    ||||| || ||||||||||||||  |||| ||||||||||  |||||||||| |||||||       ||||||||||||||||||  || ||||||||||    
T  21157587 tcctatatagattctacaaaagtagttgaataaaatccttcaattttgattgagatttta-------cgattttgctattcccttttgatctgaagtaaa 21157495  T
Q  418 gttccgattttgacaacctt 437  Q
     |||| ||||| ||||||||    
T  21157494 attccaattttaacaacctt 21157475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 279 - 412
Target Start/End: Original strand, 30294442 - 30294574
Alignment:
Q  279 ttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttac 378  Q
    |||||||||||||| || ||| ||||  ||||||  ||||| |  |||||||||| ||||||  || |||||||||||| ||||||||||| || |||||    
T  30294442 ttggtaaaatccatcgagtttgattgtgattttaggatttcttttatcgattctataaaagtagttaagtaaaatccttcgattttgattgtga-tttac 30294540  T
Q  379 gaatctcgattttgctattcccttccgacctgaa 412  Q
    || | | ||||||||| ||||||  |||||||||    
T  30294541 gatttttgattttgctcttccctctcgacctgaa 30294574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 428
Target Start/End: Complemental strand, 8629616 - 8629512
Alignment:
Q  324 atcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccg 423  Q
    ||||||||||||||| || ||||||||||  || ||||| |||||||| ||||| || || | ||||| |||||||||| | |||| |||| |||| |||    
T  8629616 atcgattctacaaaattccttgagtaaaactctctgattgtgattgcgtttttatgagtcccaattttactattccctttcaacctaaagtgaagtcccg 8629517  T
Q  424 atttt 428  Q
    |||||    
T  8629516 atttt 8629512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 437
Target Start/End: Complemental strand, 26281251 - 26281165
Alignment:
Q  349 aaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaacctt 437  Q
    |||||||||  |||||||||||||||||||||  || ||||| |||||||| || |||||| ||||||||| | |||||||||||||||    
T  26281251 aaaatccttcaattttgattgcgattttacgatcct-gattt-gctattccttttcgacctaaagtaaagtcctgattttgacaacctt 26281165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 7730287 - 7730247
Alignment:
Q  181 aaaatccatcaattttgattgagattttacgatttcttata 221  Q
    ||||||||||||||||||||| |||||||| ||||||||||    
T  7730287 aaaatccatcaattttgattgcgattttacaatttcttata 7730247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 1981321 - 1981282
Alignment:
Q  227 agtcatttatgactatataccatttataacatatatttag 266  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  1981321 agtcatttatgactatatgcaatttataacatatatttag 1981282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 399
Target Start/End: Complemental strand, 17809044 - 17809005
Alignment:
Q  360 attttgattgcgattttacgaatctcgattttgctattcc 399  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  17809044 attttgattgcgattttacgattttcgattttgctattcc 17809005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 21157669 - 21157630
Alignment:
Q  227 agtcatttatgactatataccatttataacatatatttag 266  Q
    ||||||||| || |||||||||||||||||||||||||||    
T  21157669 agtcatttacgattatataccatttataacatatatttag 21157630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 21157556 - 21157522
Alignment:
Q  181 aaaatccatcaattttgattgagattttacgattt 215  Q
    ||||||| |||||||||||||||||||||||||||    
T  21157556 aaaatccttcaattttgattgagattttacgattt 21157522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 265
Target Start/End: Complemental strand, 25842729 - 25842691
Alignment:
Q  227 agtcatttatgactatataccatttataacatatattta 265  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  25842729 agtcatttatgactatatgcaatttataacatatattta 25842691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 266
Target Start/End: Complemental strand, 17809119 - 17809074
Alignment:
Q  221 aaactaagtcatttatgactatataccatttataacatatatttag 266  Q
    ||||| |||||||||||| ||||| | |||||||||||||||||||    
T  17809119 aaactgagtcatttatgattatatgcaatttataacatatatttag 17809074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 373
Target Start/End: Complemental strand, 26340260 - 26340212
Alignment:
Q  324 atcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgat 373  Q
    |||||||||| |||||| |||||||||||| ||| |||||||||||||||    
T  26340260 atcgattctataaaagt-tttgagtaaaattcttcgattttgattgcgat 26340212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 17809493 - 17809441
Alignment:
Q  92 aaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttc 144  Q
    |||||| |||||||||| | ||||| |||||||||||||||||  ||||||||    
T  17809493 aaaatcgcgacttaaatcccaaaattcaggattttgtgactttactcaccttc 17809441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 26565476 - 26565436
Alignment:
Q  181 aaaatccatcaattttgattgagattttacgatttcttata 221  Q
    |||||||||||||||||||||  |||||||||||| |||||    
T  26565476 aaaatccatcaattttgattgcaattttacgattttttata 26565436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 177; Significance: 3e-95; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 82 - 438
Target Start/End: Original strand, 28745769 - 28746131
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    |||||||||||||||||||| |||||| |||||||  ||||||||| ||||||||||||||||   ||||||||| ||||||||||||  |||||||| |    
T  28745769 cattgttgtcaaaatcccgatttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgactcaaattcatagtagaatctcaaaatagaca 28745868  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataa------actaagtcatttatgactatataccatttataacatatatttagtannnnnnn 275  Q
    |||| |||| |||||||||| ||||||||||||||||||||      |||||||||||||||||||||||| |||||||||||||||||| ||           
T  28745869 aaattcatcgattttgattgcgattttacgatttcttataattataaactaagtcatttatgactatatactatttataacatatatttactattaattt 28745968  T
Q  276 nngttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattt 375  Q
       | |||||||||||| |||||| ||||| |||||||||||||||| |||||||||||||||||  ||||||||||| ||| |||||||||||||||||    
T  28745969 ttttgggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaattcttcgattttgattgcgattt 28746068  T
Q  376 tacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    ||||| || |||||||||||||  ||| |||||||||||||||| || |||||||||||||||    
T  28746069 tacgagtcccgattttgctattttctttcgacctgaagtaaagtcccaattttgacaaccttg 28746131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 81 - 439
Target Start/End: Original strand, 29067282 - 29067632
Alignment:
Q  81 ccattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaa 180  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||   ||||||||||||||||||||||| ||||||||     
T  29067282 ccattgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagac 29067381  T
Q  181 aaaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngtt 280  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||           ||    
T  29067382 aaaatccatcgattttgattgtgattttacgatttcttataaactaagtcatttatgactatatac---------catatatttagtgttaatttttttt 29067472  T
Q  281 --ggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttac 378  Q
      |||||||||||| |||||| ||||| ||||||||| |||| | ||| ||||||||||| || ||||||||||||||| || |||||||| |||||||     
T  29067473 tgggtaaaatccatcgattttgattgcgattttacaacttccaatatcaattctacaaaaatccttgagtaaaatccttcga-tttgattgagattttat 29067571  T
Q  379 gaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttgg 439  Q
    || |  |||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  29067572 gagttccgattttgctattcccattcgacctgaagtaaagttccgattttgacaaccttgg 29067632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 86 - 434
Target Start/End: Original strand, 39427905 - 39428258
Alignment:
Q  86 gttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaaat 185  Q
    |||||||||||||||| ||||||  |||||||| ||||||||  ||||||||||| |||   |||||||||| |||||||||||| |||||||| ||| |    
T  39427905 gttgtcaaaatcccgatttaaattttaaaatcctggattttgcaactttcttcacgttcaacgactcaaatcgatagtagaatcccaaaatagacaaagt 39428004  T
Q  186 ccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngtt-ggta 284  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||          || ||||    
T  39428005 ccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatactacttataacatatatttagtattaattttttttgggta 39428104  T
Q  285 aaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcct----ttgattttgattgcgattttacga 380  Q
    |||||||| |||||| ||||| |||||||||||||||| |||||||| |||||| |||||||||||||||||    || |||||||||||||||||| ||    
T  39428105 aaatccatcgattttgattgcgattttacaatttcctatatcgattccacaaaaatctttgagtaaaatccttcgatttattttgattgcgattttatga 39428204  T
Q  381 atctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaac 434  Q
     || |||||||||||||||||| | |||  ||||||||| ||||||||||||||    
T  39428205 gtcccgattttgctattccctttcaaccgcaagtaaagtcccgattttgacaac 39428258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 82 - 437
Target Start/End: Complemental strand, 24620333 - 24619972
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgac---tttcttcaccttccctgactcaaatccatagtagaatcctaaaatag 178  Q
    ||||||||||||||| ||||||||||| |||||||  | ||||||| |||   |||||||||||||   ||||||||| || |||||||||  |||||||    
T  24620333 cattgttgtcaaaattccgacttaaatcctaaaatttaagattttgcgacgactttcttcaccttcaacgactcaaattcacagtagaatctcaaaatag 24620234  T
Q  179 aaaaaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnng 278  Q
      ||||| |||| ||||| ||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||              
T  24620233 gcaaaattcatcgattttaattgcaattttacgatttcttataaactaagtcatttatgattatataccatttataaaatatatttagtatttttatttt 24620134  T
Q  279 tt---ggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattt 375  Q
    ||   |||||||||||   ||||| ||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24620133 tttttggtaaaatccaacaattttgattgcgattttacaattttctatatcgattctacaaaagtctttgagtaaaatccttcgattttgattgcgattt 24620034  T
Q  376 tacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaacctt 437  Q
    ||| | || | ||||||||||||||||  ||| |||||||||||||||||||||||||||||    
T  24620033 tacaagtcccaattttgctattcccttttgacttgaagtaaagttccgattttgacaacctt 24619972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 81 - 437
Target Start/End: Complemental strand, 8156262 - 8155904
Alignment:
Q  81 ccattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaat-aga 179  Q
    ||||||||||||||||||| |||||||| ||||||| ||| |||||  || ||| |||||||||  |||||||||||||||||| ||||| ||||| |||    
T  8156262 ccattgttgtcaaaatcccaacttaaattctaaaattcagaattttacgatttttttcaccttcaatgactcaaatccatagtataatcccaaaattaga 8156163  T
Q  180 aaaaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagta--nnnnnnnnn 277  Q
     |||||||||| |||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||               
T  8156162 caaaatccatcgattttgattgcgattttacgatttcttataaactaagttatttataactatataccatttataacatatatttagtattattattatt 8156063  T
Q  278 gttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgatttta 377  Q
     |||||||||||||  ||| || ||||| |||||||| |||| || ||| || ||||||||||  ||||||||||||||| ||| ||  |||||||||||    
T  8156062 tttggtaaaatcca-cgatattgattgcgattttacagtttcttatatcaatgctacaaaagtagttgagtaaaatccttcgatcttagttgcgatttta 8155964  T
Q  378 cgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaacctt 437  Q
     || | || |||||||| ||| ||| | |||||||| ||| |||  ||||||||||||||    
T  8155963 tgattgtccattttgctcttctcttaccacctgaagcaaaattctaattttgacaacctt 8155904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 88 - 437
Target Start/End: Original strand, 17064326 - 17064661
Alignment:
Q  88 tgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaaatcc 187  Q
    |||||||||||||||||||||  |||||| |||||||||| || | | |||||||||   ||||| ||| ||||||||||| |||||||||| ||||| |    
T  17064326 tgtcaaaatcccgacttaaatcttaaaattcaggattttgcgattgtgttcaccttcaacgactccaattcatagtagaattctaaaatagacaaaattc 17064425  T
Q  188 atcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttggtaaaa 287  Q
    ||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||              ||||||||||||          |||||||||    
T  17064426 atcgatttttattgcgattttacgatttcttataaactaagtcatttatgactat--------------atatatttagtattttttttttttggtaaaa 17064511  T
Q  288 tccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcga 387  Q
    ||||| |||||| ||||| ||||||||||||| || || ||||||||||||||  ||||||||||||||| |||||||||||||||||||||| | ||||    
T  17064512 tccatcgattttgattgcaattttacaatttcttatattgattctacaaaagtagttgagtaaaatccttcgattttgattgcgattttacgattgtcga 17064611  T
Q  388 ttttgctattcccttccgacctgaagtaaagttccgattttgacaacctt 437  Q
    ||||| | ||  ||| |||||||||| ||| | || ||||||||||||||    
T  17064612 ttttgatcttttctttcgacctgaagcaaaatcccaattttgacaacctt 17064661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 83 - 392
Target Start/End: Original strand, 20756039 - 20756331
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaa 182  Q
    ||||||||||||||||||||||||||  |||||| |||||||||| || |||||||||||||  ||||||||||||||||||||||| ||||||||  ||    
T  20756039 attgttgtcaaaatcccgacttaaattataaaattcaggattttgcgattttcttcaccttcaatgactcaaatccatagtagaatcttaaaataggcaa 20756138  T
Q  183 aatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttgg 282  Q
    |||| ||| ||||||||||  ||||||||||||||||||||||||||                 ||||||||||||||||||||||          | ||    
T  20756139 aatcaatcgattttgattgcaattttacgatttcttataaactaagt-----------------catttataacatatatttagtattatttcttttggg 20756221  T
Q  283 taaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaat 382  Q
    |||||||||| |||||| ||||| |||||||||||||||| ||||||||||||||| || |||||||||||| ||  ||||||||||||||||||||| |    
T  20756222 taaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaaatccttgagtaaaatctttcaattttgattgcgattttacgagt 20756321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 81 - 437
Target Start/End: Complemental strand, 22356184 - 22355841
Alignment:
Q  81 ccattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttctt-caccttccctgactcaaatccatagtagaatcctaaaataga 179  Q
    |||||||| ||||||| ||||||||||| ||||||| |||||||||  || ||| || || ||||    | |  ||| ||||||||||||||||||||      
T  22356184 ccattgttatcaaaattccgacttaaatcctaaaattcaggattttaagattttttttcagcttcaacaatttgaattcatagtagaatcctaaaataag 22356085  T
Q  180 aaaaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngt 279  Q
     ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||          |||||||||||||||||||| ||          |    
T  22356084 caaaatccatgaattttgattgcgattttacgatttcttataaactaagtcattta----------ccatttataacatatatttattattattattttt 22355995  T
Q  280 tggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacg 379  Q
    ||||||||||||| ||||||  ||||  |||||||||||     ||||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  22355994 tggtaaaatccatcgattttgtttgcggttttacaatttt----atcgattttacaaaagtccttgaataaaatcttttgattttgattgcgattttacg 22355899  T
Q  380 aatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaacctt 437  Q
    | || ||||||||||||||| || |||||||| |||||||||||||||||| ||||||    
T  22355898 agtcccgattttgctattccatttcgacctgatgtaaagttccgattttgagaacctt 22355841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 156 - 438
Target Start/End: Original strand, 42696920 - 42697202
Alignment:
Q  156 tccatagtagaatcctaaaatagaaaaaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataa 255  Q
    ||||||||||||||  |||||||  ||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42696920 tccatagtagaatctcaaaataggcaaaattcatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatataccatttataa 42697019  T
Q  256 catatatttagta-nnnnnnnnngttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatc 354  Q
    ||||||||| |||           |||||||||||||| |||||| ||||| | ||||  ||||| || |||||||||||||||||  |||| |||||||    
T  42697020 catatatttggtatttttttttttttggtaaaatccatcgattttgattgcgagtttatgatttcttatatcgattctacaaaagtagttgaataaaatc 42697119  T
Q  355 ctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    |||  |||||  |||||||||||| | | |||||||| || ||| | | |||||||||| ||| | | ||||||||||||||||    
T  42697120 cttcaattttagttgcgattttacaattgtcgatttt-ctcttctcattcgacctgaagcaaaatcctgattttgacaaccttg 42697202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 84 - 439
Target Start/End: Complemental strand, 3449419 - 3449083
Alignment:
Q  84 ttgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaa 183  Q
    ||||||||||||||||||||||||| ||||||| |||||||||| ||||||||| ||||||   | || ||||| ||||||||||||||||||||  |||    
T  3449419 ttgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttctttaccttcaacg-ctaaaatctatagtagaatcctaaaataggcaaa 3449321  T
Q  184 atccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttggt 283  Q
    ||||||  ||||| |||| ||||||||||||||||||||| |||||                 ||||| | ||||||||||||||          |||||    
T  3449320 atccatagatttttattgcgattttacgatttcttataaagtaagt-----------------catttgtgacatatatttagtattatttttt-ttggt 3449239  T
Q  284 aaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatc 383  Q
    |||||||||  ||||| ||||| |||||||| |||| || |||||||||||||||||  |||| ||||||| || ||||||| |||||||||||||| |     
T  3449238 aaaatccatcaattttgattgcgattttacattttcttatatcgattctacaaaagtagttgaataaaatcattcgattttggttgcgattttacgattg 3449139  T
Q  384 tcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttgg 439  Q
    ||||||||||| ||| ||| | |||| ||| ||| | || ||||||||||||||||    
T  3449138 tcgattttgctcttctctttcaacctaaagcaaaatcccaattttgacaaccttgg 3449083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 318 - 438
Target Start/End: Complemental strand, 8592293 - 8592173
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaa 417  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||| |||| |||||||||    
T  8592293 tcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtctcgattttgctatttcctttcgacttgaagtaaa 8592194  T
Q  418 gttccgattttgacaaccttg 438  Q
    || ||||||| ||||||||||    
T  8592193 gtcccgatttcgacaaccttg 8592173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 240 - 439
Target Start/End: Complemental strand, 25870294 - 25870095
Alignment:
Q  240 tatataccatttataacatatatttagtannnnnnnnngttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaag 339  Q
    |||||||||||||||||||||||||||||          |||||||||||||| |||||| ||||| ||||||||||||| || ||||||||||||||      
T  25870294 tatataccatttataacatatatttagtattattgttttttggtaaaatccatcgattttgattgcgattttacaatttcttatatcgattctacaaact 25870195  T
Q  340 tctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttgg 439  Q
    |  ||||||||||||||||||||||| |||||||||||||| | |||||||| || ||| ||| |||||| ||| ||| |  ||||||||||||||||||    
T  25870194 tagttgagtaaaatcctttgattttggttgcgattttacgattgtcgattttactcttctctttcgacctaaagcaaaatctcgattttgacaaccttgg 25870095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 279 - 438
Target Start/End: Original strand, 13286140 - 13286299
Alignment:
Q  279 ttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttac 378  Q
    |||||||||||||| |||||| ||||  ||||||| ||||| || |||||||||||||||||  |||||||||||| |||||||||||||||||||||||    
T  13286140 ttggtaaaatccatcgattttcattgtgattttacgatttcttatatcgattctacaaaagtagttgagtaaaatcttttgattttgattgcgattttac 13286239  T
Q  379 gaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    || | | |||||| || |||||||||||||||||| ||| ||  ||||||||||||||||    
T  13286240 gagttttgatttttctcttcccttccgacctgaagcaaaattgtgattttgacaaccttg 13286299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 92 - 412
Target Start/End: Original strand, 21963438 - 21963760
Alignment:
Q  92 aaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaaatccatca 191  Q
    ||||||||||||||||| ||||||| || ||||||  |||||||||||||||    ||||||||||||||||| ||||||||||||   ||||||||||     
T  21963438 aaaatcccgacttaaatcctaaaattcaagattttacgactttcttcaccttgaacgactcaaatccatagtaaaatcctaaaatatgcaaaatccatcg 21963537  T
Q  192 attttgattgagattttacgatttcttataaactaagtcatttatgac--tatataccatttataacatatatttagta--nnnnnnnnngttggtaaaa 287  Q
    |||||||| | |||||| |||||||||||  |||||||||||||||||  ||||||| ||||||||| |||||||||||            || ||||||    
T  21963538 attttgatagcgatttt-cgatttcttatttactaagtcatttatgactatatatactatttataac-tatatttagtattattaattttttttgtaaaa 21963635  T
Q  288 tccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcga 387  Q
    |||||  ||||| |||    |||||| ||||| || |||||||||| ||||||  ||||||||||| |||| |||||| ||| |||||||| | | ||||    
T  21963636 tccatcaattttgattctggttttacgatttcttatatcgattctataaaagtaattgagtaaaattctttaattttggttgtgattttactattgtcga 21963735  T
Q  388 ttttgctattcccttccgacctgaa 412  Q
    ||||||| ||| ||| |||||||||    
T  21963736 ttttgctcttctctttcgacctgaa 21963760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 92 - 412
Target Start/End: Original strand, 21985874 - 21986196
Alignment:
Q  92 aaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaaatccatca 191  Q
    ||||||||||||||||| ||||||| || ||||||  |||||||||||||||    ||||||||||||||||| ||||||||||||   ||||||||||     
T  21985874 aaaatcccgacttaaatcctaaaattcaagattttacgactttcttcaccttgaacgactcaaatccatagtaaaatcctaaaatatgcaaaatccatcg 21985973  T
Q  192 attttgattgagattttacgatttcttataaactaagtcatttatgac--tatataccatttataacatatatttagta--nnnnnnnnngttggtaaaa 287  Q
    |||||||| | |||||| |||||||||||  |||||||||||||||||  ||||||| ||||||||| |||||||||||            || ||||||    
T  21985974 attttgatagcgatttt-cgatttcttatttactaagtcatttatgactatatatactatttataac-tatatttagtattattaattttttttgtaaaa 21986071  T
Q  288 tccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcga 387  Q
    |||||  ||||| |||    |||||| ||||| || |||||||||| ||||||  ||||||||||| |||| |||||| ||| |||||||| | | ||||    
T  21986072 tccatcaattttgattctggttttacgatttcttatatcgattctataaaagtaattgagtaaaattctttaattttggttgtgattttactattgtcga 21986171  T
Q  388 ttttgctattcccttccgacctgaa 412  Q
    ||||||| ||| ||| |||||||||    
T  21986172 ttttgctcttctctttcgacctgaa 21986196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 83 - 439
Target Start/End: Original strand, 22137278 - 22137633
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaa 182  Q
    |||||| | ||||||| ||||||||| ||||||| || ||| ||  |||||||||||||||    | ||||||||||||||| ||||| ||||||   ||    
T  22137278 attgtttttaaaatcctgacttaaatcctaaaattcaagatgttacgactttcttcaccttgaacgcctcaaatccatagtaaaatcccaaaatatgcaa 22137377  T
Q  183 aatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagta-nnnnnnnnngttg 281  Q
    |||||||| ||||| |||| |||||| |||||||||||  |||||||||||||||||||||||| ||||||||| |||||||||||           ||     
T  22137378 aatccatcgattttaattgcgatttt-cgatttcttatttactaagtcatttatgactatatactatttataac-tatatttagtattattaattttttt 22137475  T
Q  282 gtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaa 381  Q
    |||||||||||  ||||| |||    |||||| ||||| || |||||||||||||||||  ||||||||||| ||||||||||| ||| |||||||| |     
T  22137476 gtaaaatccatcaattttgattttggttttacgatttcttatatcgattctacaaaagtagttgagtaaaattctttgattttggttgtgattttactat 22137575  T
Q  382 tctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttgg 439  Q
    |   ||||||||| ||| ||| |||||||||  ||| |  ||||||||||||| ||||    
T  22137576 tgctgattttgctcttctctttcgacctgaaacaaaatctcgattttgacaacattgg 22137633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 101 - 268
Target Start/End: Complemental strand, 22494892 - 22494732
Alignment:
Q  101 acttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaaatccatcaattttgatt 200  Q
    |||||||| ||||||||   ||||||| |||||| |||||||||   |||| |||| |||||||||||||||||||| | ||||| |||| |||||||||    
T  22494892 acttaaatcctaaaatctgagattttgcgacttttttcaccttcaacgactaaaattcatagtagaatcctaaaataaacaaaattcatcgattttgatt 22494793  T
Q  201 gagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagta 268  Q
    | |||||||||       ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22494792 gcgattttacg-------ataaactaagtcagttatgactatataccatttataacatatatttagta 22494732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 279 - 438
Target Start/End: Complemental strand, 6136502 - 6136343
Alignment:
Q  279 ttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttac 378  Q
    |||||||||||||| |||||| ||||  ||||||| ||||| || |||||||||| ||||||  |||||||||||| |||||||||||||||||||||||    
T  6136502 ttggtaaaatccatcgattttgattgtgattttacgatttcttatatcgattctataaaagtagttgagtaaaatcttttgattttgattgcgattttac 6136403  T
Q  379 gaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    || | | ||||||||| |||||||||||  ||||| ||| ||  ||||||||||| ||||    
T  6136402 gatttttgattttgcttttcccttccgatatgaagcaaaattgtgattttgacaaacttg 6136343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 203 - 438
Target Start/End: Complemental strand, 15515265 - 15515032
Alignment:
Q  203 gattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngttggtaaaatccattgattttaat 302  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||| |||||| ||    
T  15515265 gatttcacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtattattttt--ttggtaaaatccatggatttttat 15515168  T
Q  303 tgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattccctt 402  Q
    |   ||||||||||||| |  |  ||||||| ||||||  ||||||||||| ||| ||||||  ||  |||||||| | | ||||||||| |  || |||    
T  15515167 tataattttacaatttcttctaatgattctataaaagtagttgagtaaaatacttcgattttagttaagattttacaattgtcgattttggtcatctctt 15515068  T
Q  403 ccgacctgaagtaaagttccgattttgacaaccttg 438  Q
     | |||||||| ||| | |||||||| |||||||||    
T  15515067 tcaacctgaagcaaaatcccgattttaacaaccttg 15515032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 279 - 434
Target Start/End: Original strand, 27676632 - 27676787
Alignment:
Q  279 ttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttac 378  Q
    ||||||||||||||||||||| ||||  ||||||| ||||| || ||||||| |||||||||  |||||||||||| || |||||||||||||||||||     
T  27676632 ttggtaaaatccattgattttgattgtgattttacgatttcttatatcgattttacaaaagtagttgagtaaaatctttcgattttgattgcgattttaa 27676731  T
Q  379 gaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaac 434  Q
    || | ||||||||||| ||||||| |||| ||||| ||| | | |||||| |||||    
T  27676732 gattttcgattttgctcttccctttcgacttgaagcaaaatcctgattttaacaac 27676787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 216
Target Start/End: Complemental strand, 24649818 - 24649684
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaataga-aa 181  Q
    ||||||||||||||||||||||||||  ||||||| |||||||| |||||| ||||||||||   ||||||||||||||||||||| | |||||| |  |    
T  24649818 attgttgtcaaaatcccgacttaaatcgtaaaatctaggattttttgacttgcttcaccttcaacgactcaaatccatagtagaattccaaaataaagca 24649719  T
Q  182 aaatccatcaattttgattgagattttacgatttc 216  Q
    |||| |||||||||||| || ||||||||||||||    
T  24649718 aaattcatcaattttgactgtgattttacgatttc 24649684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 318 - 439
Target Start/End: Complemental strand, 8560351 - 8560230
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaa 417  Q
    ||||| || ||||||||||||  | ||||||||||||||| ||||||||||||||||| |||| |||||||||||||| ||||||  ||| |||||||||    
T  8560351 tcctatattgattctacaaaaaaccttgagtaaaatccttcgattttgattgcgatttcacgagtctcgattttgctactcccttttgacttgaagtaaa 8560252  T
Q  418 gttccgattttgacaaccttgg 439  Q
    || |||||||||| ||||||||    
T  8560251 gtcccgattttgataaccttgg 8560230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 318 - 430
Target Start/End: Original strand, 3041458 - 3041570
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaa 417  Q
    ||||| |||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||| || ||||||||||| ||| || |||| |||||||||    
T  3041458 tcctacatcgtttctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctactccatttcgacttgaagtaaa 3041557  T
Q  418 gttccgattttga 430  Q
     | ||||||||||    
T  3041558 atcccgattttga 3041570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 324 - 438
Target Start/End: Complemental strand, 20766789 - 20766675
Alignment:
Q  324 atcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccg 423  Q
    ||||||||| |||||| | |||||||||||  || |||||||||||||||||||||| |||||||||||||| || ||| |||  ||||||||||| |||    
T  20766789 atcgattctccaaaagcccttgagtaaaatttttcgattttgattgcgattttacgagtctcgattttgctactctctttcgagttgaagtaaagtcccg 20766690  T
Q  424 attttgacaaccttg 438  Q
    |||||||||||||||    
T  20766689 attttgacaaccttg 20766675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 279 - 391
Target Start/End: Original strand, 28135958 - 28136070
Alignment:
Q  279 ttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttac 378  Q
    ||||||||||  ||||||||| ||| ||||||||||||||| || ||| ||| |||||||||  ||||||||||||||| ||||||||| ||||||||||    
T  28135958 ttggtaaaatatattgattttgattcctattttacaatttcttatatcaattttacaaaagtagttgagtaaaatccttcgattttgatagcgattttac 28136057  T
Q  379 gaatctcgatttt 391  Q
    || ||||||||||    
T  28136058 gattctcgatttt 28136070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 30727820 - 30727694
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaa 182  Q
    |||||| ||||||||| |||||||||  |||||||| | |||||  ||||||||||||||||   |||||||||| |||||||||||| |||||||| ||    
T  30727820 attgttatcaaaatcctgacttaaatcttaaaatcctgaattttacgactttcttcaccttcaacgactcaaatctatagtagaatcccaaaatagacaa 30727721  T
Q  183 aatccatcaattttgattgagatttta 209  Q
    ||| |||| |||||||||| |||||||    
T  30727720 aattcatcgattttgattgcgatttta 30727694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 82 - 187
Target Start/End: Original strand, 27676355 - 27676460
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||||||||||| |||||||||  |||||| |||||||||| |||||| |||||||||  |||||||||||||||| ||||||| |||||||  |    
T  27676355 cattgttgtcaaaatcctgacttaaatcgtaaaatgcaggattttgcgactttattcaccttctatgactcaaatccatagcagaatcccaaaataggta 27676454  T
Q  182 aaatcc 187  Q
    ||||||    
T  27676455 aaatcc 27676460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 318 - 438
Target Start/End: Original strand, 22971044 - 22971163
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaa 417  Q
    ||||| ||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||| || ||||||||||| | ||||   || |||||||||    
T  22971044 tcctacatcaattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctact-ccttttaacttgaagtaaa 22971142  T
Q  418 gttccgattttgacaaccttg 438  Q
    || || ||||||| |||||||    
T  22971143 gtcccaattttgataaccttg 22971163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 330 - 438
Target Start/End: Original strand, 41671426 - 41671534
Alignment:
Q  330 tctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttg 429  Q
    |||||||||||  ||||||||||||||| ||||||| |||||||||||| | | ||||||||||| ||| ||| |||||||||| ||| | |||||||||    
T  41671426 tctacaaaagtagttgagtaaaatccttcgattttggttgcgattttacaattatcgattttgctcttctctttcgacctgaagcaaaatcccgattttg 41671525  T
Q  430 acaaccttg 438  Q
    |||||||||    
T  41671526 acaaccttg 41671534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 279 - 437
Target Start/End: Complemental strand, 10872648 - 10872490
Alignment:
Q  279 ttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttac 378  Q
    ||||||||||||||  ||||| |||   ||||||| ||||| || ||||||||| |||||||  || ||||||||||||  ||||||||||||||||||     
T  10872648 ttggtaaaatccatcaatttttattctgattttacgatttcttatatcgattcttcaaaagtagtttagtaaaatccttcaattttgattgcgattttat 10872549  T
Q  379 gaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaacctt 437  Q
    || | | |||||| || |||||||  ||||||||||||| | | |||||||||||||||    
T  10872548 gatttttgatttttctcttcccttttgacctgaagtaaaatcctgattttgacaacctt 10872490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 77 - 229
Target Start/End: Complemental strand, 25870511 - 25870350
Alignment:
Q  77 tacaccattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttc----cctgactcaaatccatagtagaatccta 172  Q
    |||| |||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||| ||||       ||||||||| | |||||||| |  |    
T  25870511 tacatcattgttgtcaaaatctcgacttaaatcctaaaatccaagattttgtgactttcttcatcttcaacgaacgactcaaattcgtagtagaacctca 25870412  T
Q  173 aaatagaaaaaatccatc-----aattttgattgagattttacgatttcttataaactaagt 229  Q
    ||||||  ||||||||||      |||||||||| ||||||||||||||||||||| |||||    
T  25870411 aaataggcaaaatccatcgatttgattttgattgcgattttacgatttcttataaattaagt 25870350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 18014226 - 18014345
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaa 417  Q
    ||||| |||| || || ||||||| ||||||||||||||| |||||||||||||||||||||| || | ||||||||| ||| ||   || |||||||||    
T  18014226 tcctatatcggttttataaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcccaattttgctactccattttaacttgaagtaaa 18014325  T
Q  418 gttccgattttgacaacctt 437  Q
    || |||||||||| ||||||    
T  18014326 gtcccgattttgataacctt 18014345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 318 - 436
Target Start/End: Original strand, 19348788 - 19348906
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaa 417  Q
    ||||| ||||||| || ||||||| || | ||||||||||  ||||||||||||||||||||| |||||||||||||| ||||||  ||| |||||||||    
T  19348788 tcctatatcgattttataaaagtccttcaataaaatccttccattttgattgcgattttacgagtctcgattttgctactcccttttgacttgaagtaaa 19348887  T
Q  418 gttccgattttgacaacct 436  Q
    ||  | ||||||| |||||    
T  19348888 gtctcaattttgataacct 19348906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 82 - 175
Target Start/End: Complemental strand, 15806635 - 15806543
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaa 175  Q
    ||||||||||||||||| ||||||||| ||| ||||||| |||||| |||||| |||||||||  |||||||||||||||| ||||||| ||||    
T  15806635 cattgttgtcaaaatcc-gacttaaatcctacaatccagaattttgcgactttattcaccttcaatgactcaaatccatagcagaatcccaaaa 15806543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 318 - 438
Target Start/End: Original strand, 27090677 - 27090797
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaa 417  Q
    ||||| ||||||| ||||||| || ||||||||||||||| |||||| |||||||| |||||| |  | ||||| |||||||||| |||||| |||||||    
T  27090677 tcctatatcgattatacaaaattccttgagtaaaatccttcgatttttattgcgatcttacgatttgcaatttttctattccctttcgacctaaagtaaa 27090776  T
Q  418 gttccgattttgacaaccttg 438  Q
     |  |||||| ||||||||||    
T  27090777 atctcgatttcgacaaccttg 27090797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 279 - 438
Target Start/End: Complemental strand, 9152917 - 9152760
Alignment:
Q  279 ttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttac 378  Q
    ||||||||||| || |||||| ||||  ||||||||||||| || ||||||||||||||| |  |||||| ||||| || ||||||| || |||||||||    
T  9152917 ttggtaaaatctatcgattttgattgtgattttacaatttcata-atcgattctacaaaaatagttgagtcaaatctttcgattttggttacgattttac 9152819  T
Q  379 gaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    || | | |||||| || ||| ||| |||||| ||| ||| | | ||||||||||||||||    
T  9152818 gattgttgattttactcttctctttcgacct-aagcaaaatcctgattttgacaaccttg 9152760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 359 - 417
Target Start/End: Complemental strand, 30727712 - 30727654
Alignment:
Q  359 gattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaa 417  Q
    ||||||||||||||||||| || ||||||||||||||||||||| | ||||||||||||    
T  30727712 gattttgattgcgattttaggagtctcgattttgctattccctttcaacctgaagtaaa 30727654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 82 - 179
Target Start/End: Original strand, 17796267 - 17796364
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaataga 179  Q
    |||| |||||||||| || ||||||||  ||||||| |||||||||||||||| |||||||||    ||| |||| ||||| ||||||||||||||||    
T  17796267 cattattgtcaaaattccaacttaaatcataaaatctaggattttgtgactttattcaccttcaacaactaaaattcatagcagaatcctaaaataga 17796364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 82 - 179
Target Start/End: Original strand, 17796376 - 17796473
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaataga 179  Q
    ||||||||||||||| |||||||||||  ||||||| ||||||||  |||||| |||| ||||    |||||||| ||||| ||||||||||||||||    
T  17796376 cattgttgtcaaaattccgacttaaatcataaaatctaggattttacgactttattcatcttcaacaactcaaattcatagcagaatcctaaaataga 17796473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 82 - 179
Target Start/End: Original strand, 19104707 - 19104804
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaataga 179  Q
    |||| |||||||||| || ||||||||  ||||||| |||||||||||||||| |||||||||    ||| |||| ||||| ||||||||||||||||    
T  19104707 cattattgtcaaaattccaacttaaatcataaaatctaggattttgtgactttattcaccttcaacaactaaaattcatagcagaatcctaaaataga 19104804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 82 - 179
Target Start/End: Original strand, 19104816 - 19104913
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaataga 179  Q
    ||||||||||||||| |||||||||||  ||||||| ||||||||  |||||| |||| ||||    |||||||| ||||| ||||||||||||||||    
T  19104816 cattgttgtcaaaattccgacttaaatcataaaatctaggattttacgactttattcatcttcaacaactcaaattcatagcagaatcctaaaataga 19104913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 438
Target Start/End: Complemental strand, 24649588 - 24649523
Alignment:
Q  373 ttttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    |||||||| || | |||||||||||||||| |||||||||||||||| || |||||||||||||||    
T  24649588 ttttacgagtcccaattttgctattccctttcgacctgaagtaaagtcccaattttgacaaccttg 24649523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 27055334 - 27055443
Alignment:
Q  324 atcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccg 423  Q
    |||||||||||||| || ||| ||||||| | ||  ||||| ||||||||||||||| |  ||||||| ||||| ||||   |||||||||||| |||||    
T  27055334 atcgattctacaaatgttttttagtaaaacctttcaattttaattgcgattttacgatttgcgattttactatttcctttttacctgaagtaaaattccg 27055433  T
Q  424 attttgacaa 433  Q
    ||||||||||    
T  27055434 attttgacaa 27055443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 93 - 187
Target Start/End: Complemental strand, 10873065 - 10872971
Alignment:
Q  93 aaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaaaaatcc 187  Q
    ||||||||| | |||| |||||||||||||||||||||  || |||||||||   ||||||||||||||| ||||||  |||||||  |||||||    
T  10873065 aaatcccgattgaaatcctaaaatccaggattttgtgatattattcaccttcaacgactcaaatccatagcagaatctcaaaataggcaaaatcc 10872971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 347 - 433
Target Start/End: Original strand, 13006089 - 13006174
Alignment:
Q  347 gtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaa 433  Q
    |||||||| ||  ||||||||||||||||||||| | || |||||||||||||||| |||||| ||| ||| | |||||||||||||    
T  13006089 gtaaaatcattcaattttgattgcgattttacgattttcaattttgctattccctttcgacctaaagcaaa-tcccgattttgacaa 13006174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 28135723 - 28135801
Alignment:
Q  84 ttgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatag 162  Q
    ||||||||||||| |||| ||||||  |||||| |||||||||| |||||| ||||| |||  ||||||||||||||||    
T  28135723 ttgttgtcaaaattccgatttaaatcgtaaaattcaggattttgcgactttattcactttcagtgactcaaatccatag 28135801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 412
Target Start/End: Original strand, 17796806 - 17796894
Alignment:
Q  324 atcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaa 412  Q
    |||||||||||||||||  ||||||||||| ||| |||||| ||||| ||||||||| | |  ||||| || ||||||| |||||||||    
T  17796806 atcgattctacaaaagtagttgagtaaaatgcttcgattttaattgcaattttacgattttttatttttcttttccctttcgacctgaa 17796894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 412
Target Start/End: Original strand, 19105246 - 19105334
Alignment:
Q  324 atcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaa 412  Q
    |||||||||||||||||  ||||||||||| ||| |||||| ||||| ||||||||| | |  ||||| || ||||||| |||||||||    
T  19105246 atcgattctacaaaagtagttgagtaaaatgcttcgattttaattgcaattttacgattttttatttttcttttccctttcgacctgaa 19105334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 359 - 430
Target Start/End: Original strand, 9169871 - 9169942
Alignment:
Q  359 gattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttga 430  Q
    |||||||||||| ||||||||  || | ||||||||| | |||| |||| ||||||||||||||||||||||    
T  9169871 gattttgattgcaattttacgggtcccaattttgctacttcctttcgacttgaagtaaagttccgattttga 9169942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 434
Target Start/End: Complemental strand, 21553786 - 21553671
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaat-cctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaa 416  Q
    ||||| ||| |||||||||||||| |||| |||||  |||| ||||||||||||||||  || | || ||||||| ||| |||||| |||  ||||||||    
T  21553786 tcctatatcaattctacaaaagtccttgaataaaaaaccttcgattttgattgcgatt--accagtcccgatttttctactccctttcgatttgaagtaa 21553689  T
Q  417 agttccgattttgacaac 434  Q
    ||| |||||||| |||||    
T  21553688 agtcccgatttttacaac 21553671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 82 - 179
Target Start/End: Original strand, 17796485 - 17796582
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaataga 179  Q
    |||||||||||||||  ||| ||||||  ||||||| ||||||||  |||||| |||||||||    ||| |||| ||||| ||||||||||||||||    
T  17796485 cattgttgtcaaaatttcgaattaaatcataaaatctaggatttttcgactttattcaccttcaacaacttaaattcatagcagaatcctaaaataga 17796582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 82 - 179
Target Start/End: Original strand, 19104925 - 19105022
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaataga 179  Q
    |||||||||||||||  ||| ||||||  ||||||| ||||||||  |||||| |||||||||    ||| |||| ||||| ||||||||||||||||    
T  19104925 cattgttgtcaaaatttcgaattaaatcataaaatctaggatttttcgactttattcaccttcaacaacttaaattcatagcagaatcctaaaataga 19105022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 6136497 - 6136457
Alignment:
Q  181 aaaatccatcaattttgattgagattttacgatttcttata 221  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  6136497 aaaatccatcgattttgattgtgattttacgatttcttata 6136457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 8592399 - 8592359
Alignment:
Q  225 taagtcatttatgactatataccatttataacatatattta 265  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  8592399 taagtcatttatgactatatgcaatttataacatatattta 8592359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 254
Target Start/End: Complemental strand, 9152984 - 9152941
Alignment:
Q  211 gatttcttataaactaagtcatttatgactatataccatttata 254  Q
    ||||||||||||||||||| ||||||||||||||| ||| ||||    
T  9152984 gatttcttataaactaagttatttatgactatatatcatgtata 9152941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 265
Target Start/End: Original strand, 19348684 - 19348722
Alignment:
Q  227 agtcatttatgactatataccatttataacatatattta 265  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  19348684 agtcatttatgactatatgcaatttataacatatattta 19348722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 265
Target Start/End: Original strand, 27676579 - 27676617
Alignment:
Q  227 agtcatttatgactatataccatttataacatatattta 265  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  27676579 agtcatttatgactatatataatttataacatatattta 27676617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 229 - 265
Target Start/End: Original strand, 9169806 - 9169842
Alignment:
Q  229 tcatttatgactatataccatttataacatatattta 265  Q
    |||||||||||||||| | ||||||||||||||||||    
T  9169806 tcatttatgactatatgcaatttataacatatattta 9169842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 10872643 - 10872603
Alignment:
Q  181 aaaatccatcaattttgattgagattttacgatttcttata 221  Q
    |||||||||||||||| |||  |||||||||||||||||||    
T  10872643 aaaatccatcaatttttattctgattttacgatttcttata 10872603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 13286145 - 13286185
Alignment:
Q  181 aaaatccatcaattttgattgagattttacgatttcttata 221  Q
    |||||||||| ||||| |||| |||||||||||||||||||    
T  13286145 aaaatccatcgattttcattgtgattttacgatttcttata 13286185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 17796771 - 17796807
Alignment:
Q  184 atccatcaattttgattgagattttacgatttcttat 220  Q
    |||||||||||||||||  ||||||||||||||||||    
T  17796771 atccatcaattttgatttcgattttacgatttcttat 17796807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 19105211 - 19105247
Alignment:
Q  184 atccatcaattttgattgagattttacgatttcttat 220  Q
    |||||||||||||||||  ||||||||||||||||||    
T  19105211 atccatcaattttgatttcgattttacgatttcttat 19105247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 27676637 - 27676677
Alignment:
Q  181 aaaatccatcaattttgattgagattttacgatttcttata 221  Q
    |||||||||  |||||||||| |||||||||||||||||||    
T  27676637 aaaatccattgattttgattgtgattttacgatttcttata 27676677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 42696870 - 42696910
Alignment:
Q  87 ttgtcaaaatcccgacttaaatactaaaatccaggattttg 127  Q
    ||||||||||||||||||||||  |||||| ||||||||||    
T  42696870 ttgtcaaaatcccgacttaaatcataaaattcaggattttg 42696910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 141; Significance: 1e-73; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 80 - 399
Target Start/End: Complemental strand, 7587 - 7268
Alignment:
Q  80 accattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaataga 179  Q
    ||||||||||| | ||||||||||||||| ||||||| |||||||||| ||||||||| ||||||   ||   ||||||||||||||||||||||||||     
T  7587 accattgttgttagaatcccgacttaaattctaaaattcaggattttgcgactttctttaccttcaacgaacaaaatccatagtagaatcctaaaatagg 7488  T
Q  180 aaaaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngt 279  Q
     ||||| |||| ||||| |||| |||||||||||||||||||||| |||| |||||||| ||||||||| ||| |||||||||||||||          |    
T  7487 caaaattcatcgattttaattgcgattttacgatttcttataaacgaagtaatttatgaatatataccaattagaacatatatttagtattattgttttt 7388  T
Q  280 tggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacg 379  Q
    ||||||||| ||| |||||| ||||| ||| |||||||||||| ||| |||| ||||||||  ||||||||||||||| |||||||||| |||||||||     
T  7387 tggtaaaattcatcgattttgattgcgattatacaatttcctatatctattcaacaaaagtacttgagtaaaatccttcgattttgattacgattttaca 7288  T
Q  380 aatctcgattttgctattcc 399  Q
    | ||||||||||||||||||    
T  7287 agtctcgattttgctattcc 7268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 120; Significance: 3e-61; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 82 - 378
Target Start/End: Complemental strand, 93834 - 93539
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||  | |||||||||| ||    |||||||||||||| ||||| |||||||||       
T  93834 cattgttgtcaaaatcccgacttaaatcctaaaatccagaattttg--attttcttcaccctcaacaactcaaatccatagaagaattctaaaataggcg 93737  T
Q  182 aaatccatcaattttgattgagattttacgatttcttataaactaagtcatttatgact-atataccatttataacatatatttagtannnnnnnnngtt 280  Q
    ||||||||| |||||||||| |||||||||||||||| |||| |||||| ||||||||| |||||| ||| |||||||||||||||||          ||    
T  93736 aaatccatcgattttgattgcgattttacgatttcttttaaattaagtcgtttatgactaatatacgattcataacatatatttagtaatatttgttttt 93637  T
Q  281 ggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttac 378  Q
    |||||||||||| |||||| ||||| ||||||| ||||  || |||||||||||||||||  |||| |||||||||| |||||||||| |||||||||    
T  93636 ggtaaaatccatcgattttgattgcgattttacgatttattatatcgattctacaaaagtagttgaataaaatccttcgattttgattacgattttac 93539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 109; Significance: 1e-54; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 278 - 438
Target Start/End: Complemental strand, 56359 - 56199
Alignment:
Q  278 gttggtaaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgatttta 377  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  56359 gttggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgatttta 56260  T
Q  378 cgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
        ||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||    
T  56259 gatgtctcgattttgctattccctttcgacctgaagtaaagtctcgattttgacaaccttg 56199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 258
Target Start/End: Complemental strand, 58790 - 58736
Alignment:
Q  204 attttacgatttcttataaactaagtcatttatgactatataccatttataacat 258  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  58790 attttacgatttcttataaactaaatcatttatgactatataccacttataacat 58736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 318 - 439
Target Start/End: Complemental strand, 14820 - 14699
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaa 417  Q
    ||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| || ||||||||||| ||| || |||| |||||||||    
T  14820 tcctacatcgattctacaaaagtctttgaataaaatccttcgattttgattgcgattttacgagtcccgattttgctactccatttcgacttgaagtaaa 14721  T
Q  418 gttccgattttgacaaccttgg 439  Q
    |  |||||||||| ||||||||    
T  14720 gccccgattttgataaccttgg 14699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 69; Significance: 9e-31; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 82 - 221
Target Start/End: Complemental strand, 231 - 91
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaata-gaa 180  Q
    ||||||||  || |||||||||||||| ||||||| |||||||||| |||||||||||| |||   ||||||||||||||||| ||| |||||||| |      
T  231 cattgttgataagatcccgacttaaatcctaaaatgcaggattttgcgactttcttcacgttcaacgactcaaatccatagtaaaattctaaaataggcg 132  T
Q  181 aaaatccatcaattttgattgagattttacgatttcttata 221  Q
    |||||||||| ||||||||||||||||||| ||||||||||    
T  131 aaaatccatcgattttgattgagattttacaatttcttata 91  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 284 - 413
Target Start/End: Complemental strand, 131 - 3
Alignment:
Q  284 aaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatc 383  Q
    ||||||||| |||||| ||||  ||||||||||||| || |||||||||||||| ||  ||||||||||||||| ||||||| || ||||||||||| |     
T  131 aaaatccatcgattttgattgagattttacaatttcttatatcgattctacaaa-gtagttgagtaaaatccttcgattttggtttcgattttacgattg 33  T
Q  384 tcgattttgctattcccttccgacctgaag 413  Q
    ||||||||||| ||| | | ||||||||||    
T  32 tcgattttgctcttctcattcgacctgaag 3  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 220 - 440
Target Start/End: Complemental strand, 8952 - 8731
Alignment:
Q  220 taaactaagtcatttatgactatataccatttataacatatatttagtannnnnnnnngtt-ggtaaaatccattgattttaattgctattttacaattt 318  Q
    |||||| |||||||||||||||||||| | ||||||||||||||||| |          || |||||||||||| |||||| ||||| ||||||||| ||    
T  8952 taaactgagtcatttatgactatatacaacttataacatatatttagcattatctttgttttggtaaaatccatcgattttgattgcgattttacaagtt 8853  T
Q  319 cctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaag 418  Q
    | || ||| |||||||||||||  ||||||||||||||| |||||||||| |||||||| || | ||||||||||| | || || | |||| ||| |||     
T  8852 cttatatctattctacaaaagtagttgagtaaaatccttcgattttgattacgattttatgattttcgattttgctctaccttttcaacctaaagcaaaa 8753  T
Q  419 ttccgattttgacaaccttggg 440  Q
    | ||||||||||  ||||||||    
T  8752 tcccgattttgaacaccttggg 8731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 82 - 178
Target Start/End: Complemental strand, 9150 - 9054
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatag 178  Q
    ||||||||||||||||| || ||||||  ||||||  |||||||||||| ||| |||||||||   ||||||||||||||| | |||||| ||||||    
T  9150 cattgttgtcaaaatcctgatttaaattttaaaatgtaggattttgtgattttattcaccttcaacgactcaaatccatagcaaaatccttaaatag 9054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 66; Significance: 6e-29; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 318 - 439
Target Start/End: Complemental strand, 38420 - 38300
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaa 417  Q
    ||||| ||||||||||||||||||  |||||||||||||| ||| | |||||| ||||||||| || ||||||||||||| |||| |||| |||||||||    
T  38420 tcctacatcgattctacaaaagtccatgagtaaaatccttcgatct-gattgcaattttacgagtcccgattttgctatttcctttcgacttgaagtaaa 38322  T
Q  418 gttccgattttgacaaccttgg 439  Q
    || |||||||||||||||||||    
T  38321 gtcccgattttgacaaccttgg 38300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 38531 - 38491
Alignment:
Q  225 taagtcatttatgactatataccatttataacatatattta 265  Q
    |||||| ||||||||||||||| ||||||||||||||||||    
T  38531 taagtcctttatgactatatacaatttataacatatattta 38491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 318 - 438
Target Start/End: Complemental strand, 76202 - 76083
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaa 417  Q
    ||||| |||||||||||||||||||||||||||||||||| ||| || ||||| ||||||||| || ||  ||||||||| |||| ||||  ||||||||    
T  76202 tcctacatcgattctacaaaagtctttgagtaaaatccttcgatctt-attgcaattttacgagtcccgggtttgctatttcctttcgactggaagtaaa 76104  T
Q  418 gttccgattttgacaaccttg 438  Q
    || ||||||||||||||||||    
T  76103 gtcccgattttgacaaccttg 76083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 265
Target Start/End: Complemental strand, 76308 - 76273
Alignment:
Q  230 catttatgactatataccatttataacatatattta 265  Q
    ||||||||||||||||| ||||||||||||||||||    
T  76308 catttatgactatatacaatttataacatatattta 76273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 318 - 430
Target Start/End: Original strand, 24621 - 24733
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaa 417  Q
    ||||| |||||||||||||||   ||||||||||||| ||||||||||||| | ||||||||| || ||||||||||| |||||| |||| |||||||||    
T  24621 tcctacatcgattctacaaaaaaatttgagtaaaatcttttgattttgattacaattttacgagtcccgattttgctactccctttcgacttgaagtaaa 24720  T
Q  418 gttccgattttga 430  Q
    |||  ||||||||    
T  24721 gttttgattttga 24733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2084 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold2084
Description:

Target: scaffold2084; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 336 - 439
Target Start/End: Original strand, 81 - 184
Alignment:
Q  336 aaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccgattttgacaacc 435  Q
    |||||| ||||||||||||||| |||||| ||| | ||||||||| || ||||||||||| ||||||  ||| ||||||||||| |||||||||| ||||    
T  81 aaagtccttgagtaaaatccttcgattttaattacaattttacgagtcccgattttgctactcccttttgacttgaagtaaagtcccgattttgataacc 180  T
Q  436 ttgg 439  Q
    ||||    
T  181 ttgg 184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0534 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 301 - 438
Target Start/End: Original strand, 888 - 1025
Alignment:
Q  301 attgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattccc 400  Q
    ||||| ||||||||||||| || |||  ||||||||||||  ||||||||||| ||| |||||||||||| ||||||||| | || |||||||| |||||    
T  888 attgcgattttacaatttcttatatctgttctacaaaagtagttgagtaaaattcttcgattttgattgcaattttacgattttcaattttgctcttccc 987  T
Q  401 ttccgacctgaagtaaagttccgattttgacaaccttg 438  Q
    ||  ||||||||| ||| | | |||||| | |||||||    
T  988 ttttgacctgaagcaaaatcctgattttaaaaaccttg 1025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 380
Target Start/End: Complemental strand, 133009 - 132947
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacga 380  Q
    ||||| |||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||    
T  133009 tcctacatcgattctacaaaagtccttgaggaaaatccttcgattttgattgcgattttacga 132947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 265
Target Start/End: Complemental strand, 133112 - 133075
Alignment:
Q  228 gtcatttatgactatataccatttataacatatattta 265  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  133112 gtcatttatgactatatgcaatttataacatatattta 133075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 324 - 437
Target Start/End: Original strand, 145829 - 145942
Alignment:
Q  324 atcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaagttccg 423  Q
    |||||||||||||||||   |||||||||||||| |||||||||||| ||||||||| | |||||||  |||||  ||| |||||||||| ||| |  |     
T  145829 atcgattctacaaaagtaagtgagtaaaatccttcgattttgattgctattttacgattttcgatttaactattttctttcgacctgaagcaaaatctca 145928  T
Q  424 attttgacaacctt 437  Q
    ||||||||||||||    
T  145929 attttgacaacctt 145942  T

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Target: scaffold0048 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 3)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 437
Target Start/End: Complemental strand, 61219 - 61089
Alignment:
Q  307 attttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccga 406  Q
    ||||||| ||||| || |||||||||||||||||  || |||||||| ||| ||||||||||| |||||||||| | |  ||||| || ||| |||  ||    
T  61219 attttacgatttcatatatcgattctacaaaagtagttaagtaaaattcttcgattttgattgtgattttacgattttaaattttacttttctcttttga 61120  T
Q  407 cctgaagtaaagttccgattttgacaacctt 437  Q
    ||||||| ||| | ||||||||| |||||||    
T  61119 cctgaagcaaaatcccgattttggcaacctt 61089  T

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Target: scaffold0048; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 82 - 175
Target Start/End: Complemental strand, 48918 - 48825
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaa 175  Q
    ||||||||| ||||| ||||||||||| |||||||| || ||||||  ||||| |||||||||   ||||||||||||||  ||||||| ||||    
T  48918 cattgttgtgaaaattccgacttaaatcctaaaatctagaattttgcaactttattcaccttcaacgactcaaatccatatgagaatcccaaaa 48825  T

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Target: scaffold0048; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 377
Target Start/End: Complemental strand, 48591 - 48497
Alignment:
Q  283 taaaatccattgattttaattgctattttacaatttcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgatttta 377  Q
    |||| ||||| |||||| || || ||||||| | ||| |  |||||||||||||||||  || |||||||||||| ||||||||||| |||||||    
T  48591 taaagtccatcgattttgatcgcgattttacgacttcttttatcgattctacaaaagtagttaagtaaaatccttcgattttgattgagatttta 48497  T

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Target: scaffold0526 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0526
Description:

Target: scaffold0526; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 438
Target Start/End: Original strand, 8391 - 8511
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgattttgctattcccttccgacctgaagtaaa 417  Q
    ||||| ||| |||||||| || || ||||||||||||||| |||||||| ||| |||||| || || | ||||| ||| |||||| |||| | |||||||    
T  8391 tcctatatcaattctacacaactccttgagtaaaatccttcgattttgactgcaattttatgagtcccaattttactactccctttcgacttaaagtaaa 8490  T
Q  418 gttccgattttgacaaccttg 438  Q
     | |||||||||| |||||||    
T  8491 ctcccgattttgataaccttg 8511  T

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Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 82 - 187
Target Start/End: Complemental strand, 37296 - 37191
Alignment:
Q  82 cattgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaatcctaaaatagaaa 181  Q
    ||||||||||||||| |||||||||||  |||||| ||| ||||||  | ||| |||||||||    |||||||||||||| |||||| ||||||||  |    
T  37296 cattgttgtcaaaatgccgacttaaattttaaaattcagaattttgcaattttattcaccttcaacaactcaaatccatagcagaatcttaaaataggta 37197  T
Q  182 aaatcc 187  Q
    ||||||    
T  37196 aaatcc 37191  T

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Target: scaffold0150 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 391
Target Start/End: Original strand, 33179 - 33246
Alignment:
Q  324 atcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgattttacgaatctcgatttt 391  Q
    |||||||||||||||||   |||||||||| ||| |||||||||||||||||||| | | ||||||||    
T  33179 atcgattctacaaaagtaagtgagtaaaattcttcgattttgattgcgattttacaattttcgatttt 33246  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 377
Target Start/End: Original strand, 142864 - 142923
Alignment:
Q  318 tcctagatcgattctacaaaagtctttgagtaaaatcctttgattttgattgcgatttta 377  Q
    ||||| ||| ||||||||||| || |||||||||||||||  ||||| ||||||||||||    
T  142864 tcctatatctattctacaaaactccttgagtaaaatccttcaattttaattgcgatttta 142923  T

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Target: scaffold0115 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 35188 - 35103
Alignment:
Q  83 attgttgtcaaaatcccgacttaaatactaaaatccaggattttgtgactttcttcaccttccctgactcaaatccatagtagaat 168  Q
    ||||||||||||||| |||||||||| ||||||| ||  ||||||  ||||| ||||||||    ||||||||| ||| |||||||    
T  35188 attgttgtcaaaatctcgacttaaattctaaaattcataattttggaactttattcacctttaacgactcaaattcattgtagaat 35103  T

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