View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20884_high_26 (Length: 283)
Name: NF20884_high_26
Description: NF20884
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20884_high_26 |
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Alignment Details
Target: chr5 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 37180372 - 37180636
Alignment:
| Q |
1 |
aatatacattaaaaacttaacaatagcaatcaaatggaccgtggactattagaaaatataattaaatttatgtctcctattgagcgtctcaccgtcaaaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
37180372 |
aatatacattaaaaacttaacaatagcaatcaaatggaccgttgactattagaaaatataattaaatttatgtctcctattgagcgtc--accgtcaaaa |
37180469 |
T |
|
| Q |
101 |
taaagtaaattttgcaattatgcatatatggaacaaaatgttaatcaatctttgaagacaattattgaagattttcgatttactttttattggtgggggt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37180470 |
taaagtaaattttgcaattatgcatatatggaacaaaatgttaatcaatctttgaagacaattattgaagattttcgatttactttttattggtgggggt |
37180569 |
T |
|
| Q |
201 |
aagattttcaatttataagtttaaagttatagtattttattcccacatgcaaggtttgtcaagtatc |
267 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37180570 |
aagattttcaatttataagtttaaagttatagtattttattcccacatgcaaggtttgtcaagtatc |
37180636 |
T |
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