View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20884_high_39 (Length: 250)
Name: NF20884_high_39
Description: NF20884
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20884_high_39 |
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Alignment Details
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 10055092 - 10054867
Alignment:
| Q |
1 |
caaaatatgttgaattactaagacaatcaatgggaatgaattgtgacccaatattctgagatgaacagcctaagaatgtgtagtcacgactaaaagaagc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10055092 |
caaaatatgttgaattactaagacaatcaatgggaatgaattgtgacccaatattctgagatgaacagcctaagaatgtgtagtcacgactaaaagaagc |
10054993 |
T |
|
| Q |
101 |
aatgaaaggagaatttgaaaaattgaggcttagaagacgttttggaagacaatcatcgggatcgtagagttgtatctgttgtgtgagatagtttatgctg |
200 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10054992 |
aatgaaaggagaatttgaaaaattgagtcttagaagacgttttggaagacaatcatcgggatcgtagagttgtatctgttgtgtgagatagtttatgctg |
10054893 |
T |
|
| Q |
201 |
cgtacgtagaattcttcagagtaagg |
226 |
Q |
| |
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|||||||||||||||||||||||||| |
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| T |
10054892 |
cgtacgtagaattcttcagagtaagg |
10054867 |
T |
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