View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20885_high_53 (Length: 255)
Name: NF20885_high_53
Description: NF20885
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20885_high_53 |
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Alignment Details
Target: chr4 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 31544920 - 31545158
Alignment:
| Q |
1 |
tctagctggggccattatgttaccaattcttcagctatgctcatgtggttcgtgcaccaaattaagttacaattagacagacgcatttgtcatatattca |
100 |
Q |
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| T |
31544920 |
tctagctggggccattatgttaccaattcttcagctatgctcatgtggttcgtgcaccaaattaagttacaattagacagacgcatttgtcatatattca |
31545019 |
T |
|
| Q |
101 |
taataataatttgaaaaagaaacaaagaatgttcaaattaaagaactcttcttgctagttgtcagatttgttcaatatgactcatgttatgttatgtcga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31545020 |
taataataatttgaaaaagaaacaaagaatgttcaaattaaagaactcttcttgctagttgtcagatttgttcaatatgactcatgttatgttatgtcga |
31545119 |
T |
|
| Q |
201 |
catgcaaaaacacaaaaaattggcaacttctagtttcat |
239 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
31545120 |
catgcaaaaacacaaaaaattggcaacttctagtttcat |
31545158 |
T |
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