View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20885_high_83 (Length: 208)
Name: NF20885_high_83
Description: NF20885
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20885_high_83 |
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Alignment Details
Target: chr5 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 36 - 194
Target Start/End: Complemental strand, 35069734 - 35069576
Alignment:
| Q |
36 |
tggggaaggggcaaattattattaataaattaaagtgacattatcgatcatttttcaatcgtccctgagaaagtttgaactctgtactatgaggttataa |
135 |
Q |
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| T |
35069734 |
tggggaaggggcaaattattattaataaattaaagtgacattatgggtcatttttcaatcgtccctgagaaagtttgaactccgtcctctgaggttataa |
35069635 |
T |
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| Q |
136 |
aggtcaaactcataccatcgaggtgatatttcattaatgaggcattgggataatcgtga |
194 |
Q |
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| T |
35069634 |
aggtcaaactcatgccaccgaggtgatatttcattaacgaggcattaggataatcgtga |
35069576 |
T |
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