View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20885_low_73 (Length: 226)

Name: NF20885_low_73
Description: NF20885
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20885_low_73
NF20885_low_73
[»] chr8 (36 HSPs)
chr8 (7-146)||(18139828-18139967)
chr8 (154-226)||(7466223-7466295)
chr8 (154-226)||(14782381-14782453)
chr8 (154-226)||(18958973-18959045)
chr8 (154-226)||(44726056-44726128)
chr8 (154-225)||(4031505-4031576)
chr8 (161-226)||(39467713-39467778)
chr8 (154-226)||(42306031-42306103)
chr8 (154-221)||(9288701-9288768)
chr8 (156-226)||(32497373-32497443)
chr8 (157-226)||(10295627-10295696)
chr8 (154-226)||(16362084-16362156)
chr8 (29-103)||(18096225-18096299)
chr8 (154-226)||(4402995-4403067)
chr8 (155-226)||(26855957-26856026)
chr8 (154-226)||(31623583-31623655)
chr8 (158-226)||(43166894-43166962)
chr8 (158-226)||(43308525-43308593)
chr8 (157-226)||(19718127-19718196)
chr8 (154-226)||(18306207-18306279)
chr8 (29-110)||(18081792-18081873)
chr8 (154-226)||(23115414-23115486)
chr8 (154-226)||(26374674-26374746)
chr8 (154-226)||(42735523-42735595)
chr8 (159-226)||(7507145-7507212)
chr8 (159-226)||(41478990-41479057)
chr8 (158-208)||(39190035-39190085)
chr8 (182-226)||(26373721-26373765)
chr8 (182-226)||(42937276-42937320)
chr8 (159-226)||(32711528-32711595)
chr8 (155-226)||(37857092-37857163)
chr8 (182-226)||(2705065-2705109)
chr8 (154-226)||(5576867-5576939)
chr8 (182-226)||(24214837-24214881)
chr8 (182-226)||(24502017-24502061)
chr8 (182-226)||(42938363-42938407)
[»] scaffold0306 (1 HSPs)
scaffold0306 (154-226)||(13812-13884)
[»] scaffold0152 (1 HSPs)
scaffold0152 (154-226)||(21443-21515)
[»] scaffold0042 (1 HSPs)
scaffold0042 (154-226)||(58281-58353)
[»] chr7 (50 HSPs)
chr7 (154-226)||(17001269-17001341)
chr7 (155-226)||(37973020-37973091)
chr7 (154-226)||(21067764-21067836)
chr7 (154-226)||(28342229-28342301)
chr7 (154-226)||(29615010-29615082)
chr7 (154-226)||(29893005-29893077)
chr7 (154-226)||(33892497-33892569)
chr7 (154-226)||(509580-509652)
chr7 (154-226)||(23101180-23101252)
chr7 (154-226)||(48117839-48117911)
chr7 (157-226)||(33382522-33382591)
chr7 (154-226)||(7993024-7993096)
chr7 (154-226)||(18838271-18838343)
chr7 (154-226)||(37327809-37327881)
chr7 (155-226)||(9882482-9882553)
chr7 (157-226)||(41827199-41827268)
chr7 (154-226)||(46405677-46405749)
chr7 (155-226)||(39027980-39028051)
chr7 (156-226)||(39783983-39784053)
chr7 (157-222)||(12963587-12963651)
chr7 (161-226)||(44257012-44257077)
chr7 (158-226)||(47066630-47066699)
chr7 (154-226)||(32883663-32883735)
chr7 (154-224)||(3022808-3022878)
chr7 (164-226)||(19251431-19251493)
chr7 (157-226)||(44122147-44122216)
chr7 (154-226)||(29585439-29585511)
chr7 (154-226)||(43187589-43187661)
chr7 (154-224)||(10676626-10676696)
chr7 (166-224)||(12740267-12740325)
chr7 (178-224)||(40460955-40461001)
chr7 (154-226)||(10068348-10068420)
chr7 (182-226)||(34695148-34695192)
chr7 (154-226)||(44343642-44343714)
chr7 (154-225)||(9179765-9179836)
chr7 (154-226)||(8078284-8078356)
chr7 (182-226)||(18914981-18915025)
chr7 (163-226)||(28035050-28035114)
chr7 (154-226)||(30440685-30440757)
chr7 (159-226)||(3634216-3634283)
chr7 (159-226)||(20275509-20275576)
chr7 (159-226)||(31638769-31638836)
chr7 (183-226)||(39219581-39219624)
chr7 (183-226)||(43581336-43581379)
chr7 (154-226)||(3797303-3797375)
chr7 (181-226)||(7719507-7719552)
chr7 (154-226)||(42678208-42678280)
chr7 (155-226)||(43679359-43679431)
chr7 (182-226)||(47879085-47879129)
chr7 (182-226)||(47914183-47914227)
[»] chr3 (50 HSPs)
chr3 (154-226)||(27240490-27240562)
chr3 (154-226)||(11431413-11431485)
chr3 (154-226)||(36674377-36674449)
chr3 (154-226)||(44906760-44906832)
chr3 (154-226)||(51737972-51738044)
chr3 (154-226)||(10660422-10660494)
chr3 (154-226)||(20832882-20832954)
chr3 (154-226)||(23753633-23753705)
chr3 (154-226)||(31646531-31646603)
chr3 (154-226)||(39842676-39842748)
chr3 (154-225)||(52618213-52618284)
chr3 (154-226)||(10728846-10728918)
chr3 (154-218)||(26107148-26107212)
chr3 (154-226)||(50762297-50762369)
chr3 (154-226)||(50903490-50903562)
chr3 (164-226)||(54628740-54628802)
chr3 (154-226)||(40897030-40897103)
chr3 (154-226)||(17946218-17946289)
chr3 (158-226)||(52810311-52810379)
chr3 (155-226)||(539628-539699)
chr3 (159-226)||(18749462-18749529)
chr3 (161-226)||(6975643-6975708)
chr3 (159-226)||(38772269-38772336)
chr3 (154-226)||(12103519-12103589)
chr3 (157-226)||(48379048-48379117)
chr3 (154-226)||(1440199-1440270)
chr3 (154-218)||(32580063-32580126)
chr3 (180-226)||(2024120-2024166)
chr3 (154-224)||(15493980-15494050)
chr3 (154-226)||(996332-996404)
chr3 (182-226)||(6035299-6035343)
chr3 (182-226)||(10139393-10139437)
chr3 (154-226)||(12734087-12734159)
chr3 (182-226)||(35337650-35337694)
chr3 (154-226)||(40246731-40246803)
chr3 (159-226)||(3206443-3206510)
chr3 (161-226)||(19253721-19253786)
chr3 (161-226)||(37820724-37820789)
chr3 (154-226)||(20498097-20498168)
chr3 (182-226)||(29449107-29449151)
chr3 (182-226)||(44762284-44762328)
chr3 (183-226)||(10104907-10104950)
chr3 (183-226)||(10216054-10216097)
chr3 (183-226)||(10225683-10225726)
chr3 (154-226)||(6589450-6589523)
chr3 (154-215)||(50901199-50901260)
chr3 (182-226)||(10105028-10105072)
chr3 (182-226)||(10216175-10216219)
chr3 (182-226)||(10225804-10225848)
chr3 (182-226)||(45215415-45215459)
[»] chr2 (31 HSPs)
chr2 (154-226)||(215474-215546)
chr2 (154-226)||(26788673-26788745)
chr2 (154-226)||(28844444-28844516)
chr2 (154-226)||(7026492-7026565)
chr2 (154-226)||(3463560-3463632)
chr2 (160-226)||(28740532-28740598)
chr2 (156-226)||(43078566-43078636)
chr2 (154-226)||(13833671-13833743)
chr2 (154-226)||(33135512-33135584)
chr2 (158-221)||(43825084-43825147)
chr2 (153-226)||(3574735-3574808)
chr2 (154-226)||(378868-378940)
chr2 (154-226)||(10657295-10657367)
chr2 (154-226)||(12407269-12407341)
chr2 (159-226)||(16269585-16269652)
chr2 (159-226)||(20605046-20605113)
chr2 (158-224)||(6224799-6224865)
chr2 (155-215)||(10125552-10125612)
chr2 (154-226)||(24776244-24776316)
chr2 (154-226)||(39698611-39698683)
chr2 (159-226)||(14198825-14198892)
chr2 (159-226)||(22552012-22552079)
chr2 (159-226)||(44765669-44765736)
chr2 (154-226)||(1789331-1789403)
chr2 (154-226)||(19144913-19144985)
chr2 (182-226)||(26601449-26601493)
chr2 (154-226)||(31170873-31170945)
chr2 (182-226)||(32125167-32125211)
chr2 (182-226)||(35316979-35317023)
chr2 (154-226)||(305715-305788)
chr2 (154-226)||(9120057-9120129)
[»] scaffold0347 (1 HSPs)
scaffold0347 (154-226)||(14783-14855)
[»] chr6 (16 HSPs)
chr6 (154-226)||(31895583-31895655)
chr6 (154-226)||(34773296-34773368)
chr6 (154-226)||(14262679-14262751)
chr6 (154-226)||(7497005-7497077)
chr6 (154-226)||(2300984-2301056)
chr6 (166-226)||(7051744-7051804)
chr6 (154-226)||(30385261-30385335)
chr6 (154-226)||(34759255-34759329)
chr6 (154-226)||(6197724-6197796)
chr6 (160-224)||(11007698-11007762)
chr6 (182-226)||(31609706-31609750)
chr6 (154-226)||(29076484-29076557)
chr6 (154-226)||(29111457-29111530)
chr6 (182-226)||(1391539-1391583)
chr6 (154-226)||(7100162-7100234)
chr6 (154-226)||(8794396-8794468)
[»] chr5 (23 HSPs)
chr5 (154-226)||(4550503-4550575)
chr5 (154-226)||(14000351-14000423)
chr5 (155-226)||(37013803-37013874)
chr5 (154-224)||(1152351-1152421)
chr5 (158-226)||(4240698-4240766)
chr5 (154-225)||(22746185-22746256)
chr5 (154-226)||(5948997-5949069)
chr5 (156-224)||(13925821-13925889)
chr5 (159-226)||(7948563-7948630)
chr5 (154-226)||(40013948-40014017)
chr5 (159-226)||(27786213-27786280)
chr5 (154-226)||(7016943-7017015)
chr5 (159-226)||(9689554-9689620)
chr5 (154-226)||(21146955-21147027)
chr5 (183-226)||(26795526-26795569)
chr5 (183-226)||(26806590-26806633)
chr5 (183-226)||(32158145-32158188)
chr5 (154-226)||(28594456-28594529)
chr5 (154-226)||(43319134-43319207)
chr5 (182-226)||(1511598-1511642)
chr5 (182-226)||(6460708-6460752)
chr5 (182-226)||(26795647-26795691)
chr5 (182-226)||(33656289-33656333)
[»] chr4 (46 HSPs)
chr4 (154-226)||(5441291-5441363)
chr4 (154-226)||(27767943-27768015)
chr4 (154-226)||(29649914-29649986)
chr4 (154-226)||(54341031-54341103)
chr4 (154-226)||(23987143-23987215)
chr4 (154-226)||(28483870-28483942)
chr4 (160-226)||(49835060-49835126)
chr4 (154-226)||(37828649-37828719)
chr4 (154-226)||(37915672-37915744)
chr4 (156-226)||(32321980-32322050)
chr4 (158-226)||(50018142-50018210)
chr4 (154-226)||(54853715-54853787)
chr4 (156-226)||(30967546-30967616)
chr4 (158-224)||(49501762-49501828)
chr4 (158-224)||(49507827-49507893)
chr4 (154-226)||(11090278-11090350)
chr4 (154-226)||(51320808-51320880)
chr4 (154-224)||(20021231-20021301)
chr4 (154-212)||(34141627-34141685)
chr4 (157-226)||(32684192-32684261)
chr4 (154-226)||(12913110-12913182)
chr4 (154-226)||(29855569-29855641)
chr4 (154-226)||(36479436-36479506)
chr4 (160-226)||(28370859-28370925)
chr4 (157-226)||(41725015-41725084)
chr4 (154-226)||(25331018-25331090)
chr4 (182-226)||(25504886-25504930)
chr4 (159-226)||(24131219-24131286)
chr4 (159-226)||(28541590-28541657)
chr4 (155-208)||(6334460-6334513)
chr4 (155-208)||(6335410-6335463)
chr4 (181-226)||(36728059-36728104)
chr4 (154-226)||(1044697-1044769)
chr4 (154-226)||(22201902-22201974)
chr4 (182-226)||(32951083-32951127)
chr4 (182-226)||(34228829-34228873)
chr4 (154-226)||(44646719-44646791)
chr4 (159-226)||(46635889-46635957)
chr4 (161-224)||(5799872-5799934)
chr4 (157-226)||(467773-467842)
chr4 (154-226)||(28100596-28100669)
chr4 (154-226)||(42786654-42786727)
chr4 (158-226)||(24736335-24736402)
chr4 (154-226)||(30009924-30009996)
chr4 (154-226)||(38230770-38230842)
chr4 (154-226)||(39479604-39479676)
[»] chr1 (43 HSPs)
chr1 (154-226)||(6312455-6312527)
chr1 (154-226)||(9322747-9322819)
chr1 (155-226)||(15835300-15835371)
chr1 (157-226)||(5495343-5495412)
chr1 (154-226)||(8141375-8141447)
chr1 (154-226)||(25612038-25612110)
chr1 (154-226)||(29396635-29396707)
chr1 (162-226)||(18798380-18798444)
chr1 (154-226)||(28387640-28387712)
chr1 (154-226)||(29219169-29219241)
chr1 (154-226)||(46327923-46327995)
chr1 (154-226)||(49230767-49230839)
chr1 (154-226)||(9577679-9577751)
chr1 (154-226)||(42290725-42290797)
chr1 (154-226)||(45272468-45272540)
chr1 (158-226)||(48177709-48177777)
chr1 (154-226)||(38536294-38536366)
chr1 (154-226)||(38558512-38558584)
chr1 (154-226)||(42657712-42657784)
chr1 (154-226)||(32589201-32589273)
chr1 (159-226)||(35279558-35279625)
chr1 (154-226)||(953700-953772)
chr1 (154-226)||(28824619-28824691)
chr1 (183-226)||(50192798-50192841)
chr1 (149-226)||(49198514-49198591)
chr1 (154-226)||(19452097-19452169)
chr1 (154-226)||(21222029-21222101)
chr1 (182-226)||(22183279-22183323)
chr1 (154-226)||(33025393-33025465)
chr1 (182-226)||(35679375-35679419)
chr1 (154-226)||(45760257-45760329)
chr1 (159-218)||(42055116-42055175)
chr1 (159-226)||(47780505-47780572)
chr1 (156-226)||(19684681-19684751)
chr1 (161-226)||(49417972-49418037)
chr1 (154-226)||(730030-730101)
chr1 (182-226)||(6304501-6304545)
chr1 (182-226)||(19007593-19007637)
chr1 (182-226)||(27198297-27198341)
chr1 (182-226)||(31572410-31572454)
chr1 (154-226)||(48194588-48194660)
chr1 (154-226)||(48203346-48203418)
chr1 (182-226)||(51826850-51826894)
[»] scaffold0543 (1 HSPs)
scaffold0543 (158-226)||(10452-10520)
[»] scaffold1504 (1 HSPs)
scaffold1504 (158-226)||(755-823)
[»] scaffold0922 (1 HSPs)
scaffold0922 (154-226)||(4088-4160)
[»] scaffold0492 (2 HSPs)
scaffold0492 (155-216)||(12030-12091)
scaffold0492 (158-216)||(11998-12056)
[»] scaffold0054 (1 HSPs)
scaffold0054 (163-226)||(37070-37133)
[»] scaffold0110 (1 HSPs)
scaffold0110 (172-226)||(39864-39918)
[»] scaffold0113 (1 HSPs)
scaffold0113 (182-226)||(39100-39144)
[»] scaffold0287 (1 HSPs)
scaffold0287 (159-226)||(11802-11869)
[»] scaffold0037 (1 HSPs)
scaffold0037 (154-226)||(100099-100171)


Alignment Details
Target: chr8 (Bit Score: 92; Significance: 8e-45; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 7 - 146
Target Start/End: Original strand, 18139828 - 18139967
Alignment:
Q  7 ccaaaaaggtccatacaatttgccttcaaattccatgggatatctaagcttccgaatcaccttaaaatcattcgtaacacagtcataaccaaacccatgc 106  Q
    |||||||||| ||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  18139828 ccaaaaaggttcatacaacttgccttcaaattctatgggatctctaagcttccgaatcaccttaaaatcattcgtaacacagtcataaccaaacccatga 18139927  T
Q  107 ggagaaaacttgatttccatcggtcgaaagctagaaggaa 146  Q
    |||| || |||| |||||| |||| ||| ||||| |||||    
T  18139928 ggaggaagcttgttttccaccggttgaatgctaggaggaa 18139967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 7466223 - 7466295
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||    
T  7466223 ggggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtggtattca 7466295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 14782453 - 14782381
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  14782453 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattca 14782381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 18959045 - 18958973
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||    
T  18959045 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtagtattca 18958973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 44726128 - 44726056
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  44726128 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattca 44726056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 4031576 - 4031505
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattc 225  Q
    ||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  4031576 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattc 4031505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 39467778 - 39467713
Alignment:
Q  161 tattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  39467778 tattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattca 39467713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 42306103 - 42306031
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||| ||||||    
T  42306103 ggggatgtattggattaggattctatgtgattttaaaagactttttaattatgaaaaagtcttgtgatattca 42306031  T

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Target: chr8; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 9288768 - 9288701
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggt 221  Q
    ||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  9288768 ggggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtggt 9288701  T

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Target: chr8; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 156 - 226
Target Start/End: Original strand, 32497373 - 32497443
Alignment:
Q  156 ggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||| ||| |||||||||| |||||||||| |||||||||||||||||||||||    
T  32497373 ggatgtattggattaggattctatgggattttaaaagactttttaatcatgaaaaagtcttgtggtattca 32497443  T

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Target: chr8; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 10295696 - 10295627
Alignment:
Q  157 gatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||||||||| ||| |||||||||| | ||||||||||||||||||||||||||||||||    
T  10295696 gatgtattggattaggattctatgggattttaaaagagtttttaattatgaaaaagtcttgtggtattca 10295627  T

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Target: chr8; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 16362084 - 16362156
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||| ||||||||||| ||| |||||||||| ||||||||||||||||||||| ||||||||||||    
T  16362084 ggggatgtattagattaggattctatgggattttaaaagactttttaattatgaaaaagttttgtggtattca 16362156  T

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Target: chr8; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 18096299 - 18096225
Alignment:
Q  29 ccttcaaattccatgggatatctaagcttccgaatcaccttaaaatcattcgtaacacagtcataaccaaaccca 103  Q
    ||||||||||| | ||||||||||| |||||||||||||||||||||||  | ||||||||||||||||||||||    
T  18096299 ccttcaaattctaagggatatctaaccttccgaatcaccttaaaatcatctgaaacacagtcataaccaaaccca 18096225  T

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Target: chr8; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 4402995 - 4403067
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||| ||||  |||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  4402995 ggggatgtattggattatgattatatgagattttaaaagactttttaattgtgaaaaagtcttttggtattca 4403067  T

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Target: chr8; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 26855957 - 26856026
Alignment:
Q  155 gggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||||||||||| |||||||||||||| ||  ||||||||||||||||| ||||||||||||    
T  26855957 gggatgtattggattaggattctatgagattttaaaagac--tttaattatgaaaaagttttgtggtattca 26856026  T

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Target: chr8; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 31623583 - 31623655
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| |||  ||||||||| | |||||||||||||||||||||||||| |||||    
T  31623583 ggggatgtattggattaggattctatggaattttaaaagattttttaattatgaaaaagtcttgtggcattca 31623655  T

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Target: chr8; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 43166962 - 43166894
Alignment:
Q  158 atgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||| ||||  ||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  43166962 atgtattggattaagattttatgggattttaaaatactttttaattaagaaaaagtcttgtggtattca 43166894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 43308593 - 43308525
Alignment:
Q  158 atgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||| |||||||||    
T  43308593 atgtattggattaggattctatggaattttaaaagactttttaattatgaaaaagtcttctggtattca 43308525  T

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Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 19718196 - 19718127
Alignment:
Q  157 gatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||||||||| ||| |||||||||| || ||||||||||||||||||| || ||||||||    
T  19718196 gatgtattggattaggattctatgggattttaaaagaccttttaattatgaaaaagtcctgcggtattca 19718127  T

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Target: chr8; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 18306279 - 18306207
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||| |||||||||| |||  |||||| || | ||||||||||||||||||||||||||||||||    
T  18306279 ggggatgtattgaattaggattctatggaattttagaagattttttaattatgaaaaagtcttgtggtattca 18306207  T

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Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 18081873 - 18081792
Alignment:
Q  29 ccttcaaattccatgggatatctaagcttccgaatcaccttaaaatcattcgtaacacagtcataaccaaacccatgcggag 110  Q
    ||||||||||| | |||||| |||| ||| |||||||||||| ||||||  |||||||| ||||||||||||||||| ||||    
T  18081873 ccttcaaattcaaagggatacctaaccttacgaatcaccttataatcatctgtaacacaatcataaccaaacccatgaggag 18081792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 23115486 - 23115414
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | | |||||||||| ||||||| || |||||||||||||||||||||||    
T  23115486 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattca 23115414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 26374746 - 26374674
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||| | ||||| | | |||||||||| ||||||| || |||||||||||||||| ||||||    
T  26374746 ggggatgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattca 26374674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 42735595 - 42735523
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | | |||||||||| ||||||| || |||||||||||||||||||||||    
T  42735595 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattca 42735523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 7507212 - 7507145
Alignment:
Q  159 tgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| | ||||| | | |||||||||| ||||||| || |||||||||||||||||||||||    
T  7507212 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattca 7507145  T

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Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 41478990 - 41479057
Alignment:
Q  159 tgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| | ||||| | | |||||||||| ||||||| || |||||||||||||||||||||||    
T  41478990 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattca 41479057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 39190085 - 39190035
Alignment:
Q  158 atgtattggattaggattccatgagattttaaaatactttttaattatgaa 208  Q
    ||||||||||||||||||| | | |||||||||| ||||||||||||||||    
T  39190085 atgtattggattaggattctaagggattttaaaagactttttaattatgaa 39190035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 26373721 - 26373765
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| ||||||| || |||||||||||||||||||||||    
T  26373721 gattttaaaagacttttttatcatgaaaaagtcttgtggtattca 26373765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 42937276 - 42937320
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| ||||||| || |||||||||||||||||||||||    
T  42937276 gattttaaaagacttttttatcatgaaaaagtcttgtggtattca 42937320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 32711595 - 32711528
Alignment:
Q  159 tgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| | ||||| | |||| ||||||| ||||||| || |||||||||| ||||||||||||    
T  32711595 tgtattggatcatgattctaagagactttaaaagacttttttatcatgaaaaagttttgtggtattca 32711528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 37857092 - 37857163
Alignment:
Q  155 gggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||| ||||||||||| |||  | | |||||||||| | ||||||||||||||||||| ||| ||||||||    
T  37857092 gggatatattggattagaattttacgggattttaaaagattttttaattatgaaaaagttttgaggtattca 37857163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 2705109 - 2705065
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| | ||||| || |||||||||||||||||||||||    
T  2705109 gattttaaaagatttttttatcatgaaaaagtcttgtggtattca 2705065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 5576939 - 5576867
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||||| ||||| | | |||||||||| | |||||  | |||||| ||||||||||||||||    
T  5576939 gggggtgtattggattatgattctaagggattttaaaagatttttttgtcatgaaatagtcttgtggtattca 5576867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 24214881 - 24214837
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| ||||||| || || ||||||||||||||||||||    
T  24214881 gattttaaaagacttttttatcataaaaaagtcttgtggtattca 24214837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 24502061 - 24502017
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| ||||||| || |||||||||||||||| ||||||    
T  24502061 gattttaaaagacttttttatcatgaaaaagtcttgtgttattca 24502017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 42938407 - 42938363
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| ||||||| |  |||||||||||||||||||||||    
T  42938407 gattttaaaagacttttttaccatgaaaaagtcttgtggtattca 42938363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 13812 - 13884
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13812 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattca 13884  T

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Target: scaffold0152 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 21515 - 21443
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21515 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattca 21443  T

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Target: scaffold0042 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 58353 - 58281
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  58353 ggggatgtattggattaggattccatgggattttaaaagactttttaattatgaaaaagtcttgtggtattca 58281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 17001341 - 17001269
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17001341 ggggatgtattggattaggattctatgagattttaaaaaactttttaattatgaaaaagtcttgtggtattca 17001269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 37973091 - 37973020
Alignment:
Q  155 gggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  37973091 gggatgtattggattaggattctatgagattttaaaatactttttaattatgaaagagtcttgtggtattca 37973020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 21067764 - 21067836
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||    
T  21067764 ggggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtggtattca 21067836  T

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Target: chr7; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 28342229 - 28342301
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  28342229 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattca 28342301  T

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Target: chr7; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 29615082 - 29615010
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29615082 ggggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattca 29615010  T

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Target: chr7; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 29893005 - 29893077
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29893005 ggggatgtattagattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattca 29893077  T

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Target: chr7; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 33892569 - 33892497
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  33892569 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagttttgtggtattca 33892497  T

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Target: chr7; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 509580 - 509652
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||  ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  509580 ggggatgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattca 509652  T

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Target: chr7; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 23101180 - 23101252
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| |||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  23101180 ggggatgtatcggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattca 23101252  T

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Target: chr7; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 48117911 - 48117839
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||||||| |||| ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  48117911 ggggatgtattggattagtattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattca 48117839  T

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Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 33382522 - 33382591
Alignment:
Q  157 gatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||    
T  33382522 gatgtattagattaggattctatgagattttaaaagactttttaattatgaaaaagtcttatggtattca 33382591  T

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Target: chr7; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 7993024 - 7993096
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||| ||||| ||  |||||||||| ||||||||||||||||||||||||||||||||||    
T  7993024 ggggatgtattggattaagattctataggattttaaaagactttttaattatgaaaaagtcttgtggtattca 7993096  T

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Target: chr7; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 18838271 - 18838343
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| ||| |||| ||||| |||||||||||||||||| |||||||||||||||    
T  18838271 ggggatgtattggattaggattctatgggattataaaagactttttaattatgaaaatgtcttgtggtattca 18838343  T

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Target: chr7; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 37327809 - 37327881
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| |||||| ||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  37327809 ggggatgtataggattaagattcaatgggattttaaaagactttttaattatgaaaaagtcttgtggtattca 37327881  T

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Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 9882553 - 9882482
Alignment:
Q  155 gggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||||||||||| ||  |||||||||| |||||||||||||||||||||||| |||||||||    
T  9882553 gggatgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttatggtattca 9882482  T

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Target: chr7; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 41827199 - 41827268
Alignment:
Q  157 gatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||| |||  ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  41827199 gatgtattggattagaattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattca 41827268  T

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Target: chr7; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 46405749 - 46405677
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||| |||||||||||||||| |||  ||||||||| |||||||||||||||||||||| |||||||||||    
T  46405749 ggggatatattggattaggattctatggaattttaaaagactttttaattatgaaaaagtcatgtggtattca 46405677  T

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Target: chr7; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 39027980 - 39028051
Alignment:
Q  155 gggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||||||||||  ||   ||||||||| ||||||||||||||||||||||||||||||||||    
T  39027980 gggatgtattggattaggattttatagaattttaaaagactttttaattatgaaaaagtcttgtggtattca 39028051  T

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Target: chr7; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 156 - 226
Target Start/End: Original strand, 39783983 - 39784053
Alignment:
Q  156 ggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||  ||||| ||| |||||||||| |||||||||||||||||||||| |||||||||||    
T  39783983 ggatgtattggattgagattctatgggattttaaaagactttttaattatgaaaaagtcatgtggtattca 39784053  T

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Target: chr7; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 12963587 - 12963651
Alignment:
Q  157 gatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggta 222  Q
    |||||||||||||||||||| | |||||||||||| |||||||||||| |||||||||||||||||    
T  12963587 gatgtattggattaggattcta-gagattttaaaagactttttaattacgaaaaagtcttgtggta 12963651  T

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Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 44257077 - 44257012
Alignment:
Q  161 tattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||||| |||||||||||||| | |||||||||||||||||||  |||||||||||    
T  44257077 tattggattaggattcgatgagattttaaaaaagtttttaattatgaaaaagttctgtggtattca 44257012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 47066630 - 47066699
Alignment:
Q  158 atgtattggattaggattccatgagattttaaaatactttttaattatg-aaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||| ||| ||||| |||| |||||||||||||| ||||||||||||||||||||    
T  47066630 atgtattggattaggattctatgggatttaaaaagactttttaattatgaaaaaagtcttgtggtattca 47066699  T

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Target: chr7; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 32883663 - 32883735
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||| ||||| ||| |||||||||| | ||||||||||||||||||| ||||| ||||||    
T  32883663 ggggatgtattggattatgattctatgggattttaaaagattttttaattatgaaaaagttttgtgatattca 32883735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 224
Target Start/End: Original strand, 3022808 - 3022878
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtatt 224  Q
    |||||||||||| |||||||||| ||| |||||||||| | ||||||||||||||||||| || |||||||    
T  3022808 ggggatgtattgaattaggattctatgggattttaaaagattttttaattatgaaaaagttttatggtatt 3022878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 19251431 - 19251493
Alignment:
Q  164 tggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||| | |||||||||||| |||||||||||| ||||||||||||| |||||||    
T  19251431 tggattaggattctaagagattttaaaagactttttaattacgaaaaagtcttgtagtattca 19251493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 44122216 - 44122147
Alignment:
Q  157 gatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||| |||| ||  |||||||||| | ||||||||||||||||||| ||||||||||||    
T  44122216 gatgtattggattagaattctataggattttaaaagattttttaattatgaaaaagtattgtggtattca 44122147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 29585439 - 29585511
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||| ||||| |||| ||||| | |||||||||||| | ||||||||||||||||||| ||||||||||||    
T  29585439 ggggatttattgaattatgattctacgagattttaaaagattttttaattatgaaaaagttttgtggtattca 29585511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 43187661 - 43187589
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||||    |||| | |||||||||||| ||||||||||||||||| ||||||||||||||||    
T  43187661 ggggatgtattggatcgaaattctaagagattttaaaagactttttaattatgaaagagtcttgtggtattca 43187589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 10676696 - 10676626
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtatt 224  Q
    |||||||| || ||||||| ||| | | |||||||||| ||||||||||||||||||| ||||||||||||    
T  10676696 ggggatgtgttagattaggtttctaagggattttaaaagactttttaattatgaaaaaatcttgtggtatt 10676626  T

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Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 224
Target Start/End: Original strand, 12740267 - 12740325
Alignment:
Q  166 gattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtatt 224  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||| ||| ||| ||||    
T  12740267 gattaggattctatgagattttaaaagactttttaattatgaaaaaatctggtgatatt 12740325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 40461001 - 40460955
Alignment:
Q  178 atgagattttaaaatactttttaattatgaaaaagtcttgtggtatt 224  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||    
T  40461001 atgagattttaaaagactttttaattatgaaaaagttttgtggtatt 40460955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 10068348 - 10068420
Alignment:
Q  154 ggggatgtattggattaggattcc-atgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||| || |||||  ||| |||||||||| ||||||||||||||||||||||||||| ||||||    
T  10068348 ggggatgtattggaatatgattctgatg-gattttaaaagactttttaattatgaaaaagtcttgtgatattca 10068420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 34695148 - 34695192
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||    
T  34695148 gattttaaaagacttttttattatgaaaaagtcttgtggtattca 34695192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 44343714 - 44343642
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | | |||||||||| ||||||| || |||||||||||||||||||||||    
T  44343714 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattca 44343642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 225
Target Start/End: Original strand, 9179765 - 9179836
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattc 225  Q
    |||| ||||||||||||| |||| |  ||||||||||| ||||||| || |||||||||||||||| |||||    
T  9179765 gggggtgtattggattagcattctaaaagattttaaaagacttttttatcatgaaaaagtcttgtgatattc 9179836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 8078284 - 8078356
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | | |||||||||| ||||||| || || ||||||||||||||||||||    
T  8078284 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcataaaaaagtcttgtggtattca 8078356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 18915025 - 18914981
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| ||||||| || |||||||||||||||||||||||    
T  18915025 gattttaaaagacttttttatcatgaaaaagtcttgtggtattca 18914981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 28035114 - 28035050
Alignment:
Q  163 ttggattaggattccatgagattttaaaatacttttt-aattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||| |||  ||||||||| ||||||| |||||| ||||||| ||||||||||||    
T  28035114 ttggattaggattctatggaattttaaaagacttttttaattattaaaaagttttgtggtattca 28035050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 30440685 - 30440757
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | | |||||||||| ||||||| || |||||||| ||||||||||||||    
T  30440685 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaaatcttgtggtattca 30440757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 3634216 - 3634283
Alignment:
Q  159 tgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||| ||||| |  | |||||||||| ||||||| ||||| ||||||||||||| ||||||    
T  3634216 tgtattggattcggatttctagggattttaaaagacttttttattataaaaaagtcttgtgatattca 3634283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 20275576 - 20275509
Alignment:
Q  159 tgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| | ||||| | | |||||||||| ||||||| || ||||| |||||||||||||||||    
T  20275576 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaataagtcttgtggtattca 20275509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 31638769 - 31638836
Alignment:
Q  159 tgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||| || | ||||| | |||||||||||| ||||||| || ||||||||||| |||||||||||    
T  31638769 tgtattgaatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcatgtggtattca 31638836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 39219624 - 39219581
Alignment:
Q  183 attttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||| ||||||| || |||||||||||||||||||||||    
T  39219624 attttaaaagacttttttatcatgaaaaagtcttgtggtattca 39219581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 43581379 - 43581336
Alignment:
Q  183 attttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||| ||||||| || |||||||||||||||||||||||    
T  43581379 attttaaaagacttttttatcatgaaaaagtcttgtggtattca 43581336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 3797375 - 3797303
Alignment:
Q  154 ggggatgtattggattaggattcca-tgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||| ||||| ||||| | ||| ||||||||| ||||||||||||||||| ||| ||| ||||||||    
T  3797375 ggggatgtattagattatgattctaatga-attttaaaagactttttaattatgaaatagttttgaggtattca 3797303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 7719552 - 7719507
Alignment:
Q  181 agattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||| ||||||| || |||||||| ||||||||||||||    
T  7719552 agattttaaaagacttttttatcatgaaaaattcttgtggtattca 7719507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 42678280 - 42678208
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||| || | |||| || |||||||||||| |||||||||| || ||||| ||| ||| ||||||    
T  42678280 ggggatgtattgaatcaagatttcaagagattttaaaagactttttaatgataaaaaaatctggtgatattca 42678208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 43679359 - 43679431
Alignment:
Q  155 gggatgtattggattaggattccatgagattttaaaatacttttta-attatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||| | ||||| | | |||||||||| | |||||  || |||||||||||||||||||||||    
T  43679359 gggatgtattggatcatgattctaagggattttaaaagattttttttatcatgaaaaagtcttgtggtattca 43679431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 47879085 - 47879129
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| |||| || || |||||||||||||||||||||||    
T  47879085 gattttaaaagacttatttataatgaaaaagtcttgtggtattca 47879129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 47914183 - 47914227
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| |||| || || |||||||||||||||||||||||    
T  47914183 gattttaaaagacttatttataatgaaaaagtcttgtggtattca 47914227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 27240562 - 27240490
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27240562 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattca 27240490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 11431413 - 11431485
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||    
T  11431413 ggggatgtattggattaggattctataagattttaaaagactttttaattatgaaaaagtcttgtggtattca 11431485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 36674449 - 36674377
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  36674449 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattca 36674377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 44906832 - 44906760
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  44906832 ggggatatattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattca 44906760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 51738044 - 51737972
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  51738044 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaaatcttgtggtattca 51737972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 10660422 - 10660494
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  10660422 ggggatgtattggattaagattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattca 10660494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 20832882 - 20832954
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||| ||||||||||||    
T  20832882 ggggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagttttgtggtattca 20832954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 23753705 - 23753633
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| ||  |||||||||| ||||||||||||||||||||||||||||||||||    
T  23753705 ggggatgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttgtggtattca 23753633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 31646603 - 31646531
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||| |||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  31646603 ggggatgtattgaattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattca 31646531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 39842748 - 39842676
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||| ||||||||||||    
T  39842748 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagttttgtggtattca 39842676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 52618284 - 52618213
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattc 225  Q
    ||||||||||| ||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  52618284 ggggatgtattagattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattc 52618213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 10728918 - 10728846
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||||||| |||| |||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  10728918 ggggatgtattggattagcattctatggaattttaaaagactttttaattatgaaaaagtcttgtggtattca 10728846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 26107148 - 26107212
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgt 218  Q
    ||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||    
T  26107148 ggggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgt 26107212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 50762369 - 50762297
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||  ||| |||||||||| ||||||||||||||||||||| ||||||||||||    
T  50762369 ggggatgtattggattaggattatatgggattttaaaagactttttaattatgaaaaagtattgtggtattca 50762297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 50903562 - 50903490
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||| |||| ||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  50903562 ggggatgtattgaattatgattctatgggattttaaaatactttttaagtatgaaaaagtcttgtggtattca 50903490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 54628740 - 54628802
Alignment:
Q  164 tggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||    
T  54628740 tggattaggattctatgagattttaaaagactttttaattatgaaaacgtcttgtggtattca 54628802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 40897030 - 40897103
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatg-aaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| ||| |||||||||| |||||||||||||| ||||| ||||||||||||||    
T  40897030 ggggatgtattggattaggattctatgggattttaaaacactttttaattatgaaaaaaatcttgtggtattca 40897103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 17946218 - 17946289
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| ||  ||||| |||| ||||||||||||||||||||||||||||||||||    
T  17946218 ggggatgtattggattaggattctataggattt-aaaagactttttaattatgaaaaagtcttgtggtattca 17946289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 52810311 - 52810379
Alignment:
Q  158 atgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||| ||||||||||| ||||||||||||    
T  52810311 atgtattggattaggattctatgggattttaaaagactttttaactatgaaaaagtgttgtggtattca 52810379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 539699 - 539628
Alignment:
Q  155 gggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||||||| ||| | |||||||||||| | |||||||||||||||||| |||||||||||||    
T  539699 gggatgtattggattagggttctaagagattttaaaagattttttaattatgaaaaagccttgtggtattca 539628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 18749462 - 18749529
Alignment:
Q  159 tgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||||||| ||   ||||||||| ||||||||||||||||||||||||||||||||||    
T  18749462 tgtattggattaggattctatagaattttaaaagactttttaattatgaaaaagtcttgtggtattca 18749529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 6975643 - 6975708
Alignment:
Q  161 tattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||||| |||| ||||||||||| |||||||| |||||||||||||||| ||||||    
T  6975643 tattggattaggattctatgaaattttaaaatattttttaatgatgaaaaagtcttgtgatattca 6975708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 38772269 - 38772336
Alignment:
Q  159 tgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||| |||||||||||   |||||||||||| |||||||| |||||||||||||||||||||||||    
T  38772269 tgtattagattaggattctgagagattttaaaagactttttatttatgaaaaagtcttgtggtattca 38772336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 12103519 - 12103589
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||||||| |||| |  ||||||||||| ||||||||||||||||| |||||||| |||||||    
T  12103519 ggggatgtattggattagaattcta--agattttaaaagactttttaattatgaaatagtcttgttgtattca 12103589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 48379048 - 48379117
Alignment:
Q  157 gatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||| ||||| ||  |||||||||| ||||||||||||| ||||||||| ||||||||||    
T  48379048 gatgtattggattatgattctataggattttaaaagactttttaattatcaaaaagtctcgtggtattca 48379117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 1440270 - 1440199
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||| | | ||||| | |||||||||||||||||||| || |||||||||||||||||||||||    
T  1440270 ggggatgtattgggtcatgattctaagagattttaaaatacttttt-atcatgaaaaagtcttgtggtattca 1440199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 32580063 - 32580126
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgt 218  Q
    ||||||||||||||||||||||| |||||||||||||| |   ||||||||||||||||||||||    
T  32580063 ggggatgtattggattaggattctatgagattttaaaa-aaaatttaattatgaaaaagtcttgt 32580126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 2024120 - 2024166
Alignment:
Q  180 gagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||    
T  2024120 gagattttaaaatatttttttattatgaaaaagtcttgtggtattca 2024166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 15494050 - 15493980
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtatt 224  Q
    |||||||||||||||||  |||| | | |||||||||| ||||||||||||||||||| |||||| |||||    
T  15494050 ggggatgtattggattataattctaagggattttaaaagactttttaattatgaaaaaatcttgtagtatt 15493980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 996404 - 996332
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | | |||||||||| ||||||| || |||||||||||||||||||||||    
T  996404 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattca 996332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 6035343 - 6035299
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||    
T  6035343 gattttaaaagactttttaattatgaaaaaatcttgtggtattca 6035299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 10139437 - 10139393
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||||||| || |||||||||||||||||||||||    
T  10139437 gattttaaaatacttttttatcatgaaaaagtcttgtggtattca 10139393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 12734159 - 12734087
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | | |||||||||| ||||||| || |||||||||||||||||||||||    
T  12734159 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattca 12734087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 35337650 - 35337694
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||    
T  35337650 gattttaaaagacttttttattatgaaaaagtcttgtggtattca 35337694  T

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Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 40246731 - 40246803
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | |||||||||||| ||||||| ||  ||||||||||||||||||||||    
T  40246731 gggggtgtattggatcatgattctaagagattttaaaaaacttttttatcgtgaaaaagtcttgtggtattca 40246803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 3206510 - 3206443
Alignment:
Q  159 tgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| | ||||| | | |||||||||| ||||||| || |||||||||||||||||||||||    
T  3206510 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattca 3206443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 19253721 - 19253786
Alignment:
Q  161 tattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||| | ||||| | | |||||||||| ||||||| || |||||||||||||||||||||||    
T  19253721 tattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattca 19253786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 37820789 - 37820724
Alignment:
Q  161 tattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||| | ||||| | | |||||||||| ||||||| || |||||||||||||||||||||||    
T  37820789 tattggataatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattca 37820724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 20498097 - 20498168
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | | |||||||||| |||||||| | |||||||||||||||||||||||    
T  20498097 gggggtgtattggatcatgattctaagggattttaaaagacttttta-tcatgaaaaagtcttgtggtattca 20498168  T

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Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 29449151 - 29449107
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| ||||||| ||||||||||| ||||||||||||||    
T  29449151 gattttaaaagacttttttattatgaaaaaatcttgtggtattca 29449107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 44762328 - 44762284
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| ||||||| || |||||||||||||||||||||||    
T  44762328 gattttaaaagacttttttataatgaaaaagtcttgtggtattca 44762284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 10104950 - 10104907
Alignment:
Q  183 attttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||| ||||||| ||||| ||||||||||||||||||||    
T  10104950 attttaaaaaactttttgattataaaaaagtcttgtggtattca 10104907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 10216097 - 10216054
Alignment:
Q  183 attttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||| ||||||| ||||| ||||||||||||||||||||    
T  10216097 attttaaaaaactttttgattataaaaaagtcttgtggtattca 10216054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 10225726 - 10225683
Alignment:
Q  183 attttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||| ||||||| ||||| ||||||||||||||||||||    
T  10225726 attttaaaaaactttttgattataaaaaagtcttgtggtattca 10225683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 6589450 - 6589523
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatacttttta-attatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||| | ||||| | | || ||||||| |||||||  || |||||||||||||||||||||||    
T  6589450 ggggatgtattggatcatgattctaagggactttaaaagactttttttatcatgaaaaagtcttgtggtattca 6589523  T

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Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 50901260 - 50901199
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtct 215  Q
    |||||||||||||||||  |||  | | |||||||||| ||||||||||||| |||||||||    
T  50901260 ggggatgtattggattaaaattttaagggattttaaaagactttttaattataaaaaagtct 50901199  T

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Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 10105072 - 10105028
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| ||||||| ||||| ||||| ||||||||||||||    
T  10105072 gattttaaaagacttttttattataaaaaaatcttgtggtattca 10105028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 10216219 - 10216175
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| | ||||| ||||| ||||||||||||||||||||    
T  10216219 gattttaaaagatttttttattataaaaaagtcttgtggtattca 10216175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 10225848 - 10225804
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| ||||||| ||||| ||||||||||||| ||||||    
T  10225848 gattttaaaagacttttttattataaaaaagtcttgtgctattca 10225804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 45215459 - 45215415
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| |||||||||| || ||||| ||||||||||||||    
T  45215459 gattttaaaagactttttaataataaaaaaatcttgtggtattca 45215415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 215546 - 215474
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  215546 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattca 215474  T

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Target: chr2; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 26788673 - 26788745
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  26788673 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattca 26788745  T

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Target: chr2; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 28844444 - 28844516
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  28844444 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattca 28844516  T

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Target: chr2; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 7026492 - 7026565
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatg-aaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  7026492 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaaagtcttgtggtattca 7026565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 3463560 - 3463632
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  3463560 ggggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaaatcttgtggtattca 3463632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 28740598 - 28740532
Alignment:
Q  160 gtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  28740598 gtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattca 28740532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 156 - 226
Target Start/End: Original strand, 43078566 - 43078636
Alignment:
Q  156 ggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||| ||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  43078566 ggatgtattggattaggattctatgggattttaaaagactttttgattatgaaaaagtcttgtggtattca 43078636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 13833743 - 13833671
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| |||||||||||||| |  |||||||||||||||||| ||||||||||||    
T  13833743 ggggatgtattggattaggattctatgagattttaaaagatattttaattatgaaaaagtattgtggtattca 13833671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 33135512 - 33135584
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| ||  |||||||||| |||||||||||||||||||||||| |||||||||    
T  33135512 ggggatgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttatggtattca 33135584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 43825084 - 43825147
Alignment:
Q  158 atgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggt 221  Q
    ||||||||||||| ||||| |||||||||||||| | |||||||||||||||||||||||||||    
T  43825084 atgtattggattatgattctatgagattttaaaagattttttaattatgaaaaagtcttgtggt 43825147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 226
Target Start/End: Original strand, 3574735 - 3574808
Alignment:
Q  153 tggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||| ||||||||| |||| |||  ||||||||| ||||||||||||||||||||| ||||||||||||    
T  3574735 tggggatgtgttggattagaattctatggaattttaaaagactttttaattatgaaaaagttttgtggtattca 3574808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 378868 - 378940
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||| | ||||  | | |||||||||| ||||||||||||||||||||||||||||||||||    
T  378868 ggggatgtattggatcatgattataagggattttaaaagactttttaattatgaaaaagtcttgtggtattca 378940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 10657295 - 10657367
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||||| |||||| ||| |||||||||  |||||||| ||||||||||||| |||||||||||    
T  10657295 ggggatgtattggatttggattctatgggattttaaatgactttttagttatgaaaaagtcgtgtggtattca 10657367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 12407269 - 12407341
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | |||||||||||| ||||||| || |||||||||||||||||||||||    
T  12407269 gggggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcttgtggtattca 12407341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 16269585 - 16269652
Alignment:
Q  159 tgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| | ||||| | | |||||||||| ||||||| ||||||||||||||||||||||||||    
T  16269585 tgtattggatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattca 16269652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 20605046 - 20605113
Alignment:
Q  159 tgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| | ||||| | | |||||||||| |||||||||| |||||||||||||||||||||||    
T  20605046 tgtattggatcatgattctaagggattttaaaagactttttaatcatgaaaaagtcttgtggtattca 20605113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 224
Target Start/End: Complemental strand, 6224865 - 6224799
Alignment:
Q  158 atgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtatt 224  Q
    ||||||| ||||||||||| || | |||||||||  |||||||||||||||||||| ||||||||||    
T  6224865 atgtattagattaggattctataaaattttaaaaagctttttaattatgaaaaagttttgtggtatt 6224799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 10125612 - 10125552
Alignment:
Q  155 gggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtct 215  Q
    |||||||||| |||||| |||| | |||||||||||| | |||||||||||||||||||||    
T  10125612 gggatgtattcgattagaattctaagagattttaaaagattttttaattatgaaaaagtct 10125552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 24776244 - 24776316
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | | |||||||||| ||||||| || |||||||||||||||||||||||    
T  24776244 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattca 24776316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 39698683 - 39698611
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||| |||||||||| || |||||||||||| ||||||||| ||| ||| | ||||||||||||||    
T  39698683 gggggtgtattcgattaggatttcaagagattttaaaaaactttttaactataaaacaatcttgtggtattca 39698611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 14198892 - 14198825
Alignment:
Q  159 tgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| | ||||| | | |||||||||| ||||||| || |||||||||||||||||||||||    
T  14198892 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattca 14198825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 22552079 - 22552012
Alignment:
Q  159 tgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| | ||||| | | |||||||||| ||||||| || |||||||||||||||||||||||    
T  22552079 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattca 22552012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 44765669 - 44765736
Alignment:
Q  159 tgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| | ||||| | | |||||||||| ||||||| || |||||||||||||||||||||||    
T  44765669 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattca 44765736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 1789331 - 1789403
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | |||||||||||| | ||||| || || ||||||||||||||||||||    
T  1789331 gggggtgtattggatcatgattctaagagattttaaaagatttttttatcataaaaaagtcttgtggtattca 1789403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 19144913 - 19144985
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| ||||||||| || ||||| | | |||||||||||| ||||| || || ||||||||||||||||||||    
T  19144913 gggggtgtattggaatatgattctaagggattttaaaatatttttttatcataaaaaagtcttgtggtattca 19144985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 26601493 - 26601449
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| ||||||| ||||| ||||||||||||||||||||    
T  26601493 gattttaaaagacttttttattattaaaaagtcttgtggtattca 26601449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 31170945 - 31170873
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | | |||||||||| ||||||| || |||||||||||||||| ||||||    
T  31170945 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattca 31170873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 32125167 - 32125211
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| ||||||| || |||||||||||||||||||||||    
T  32125167 gattttaaaagacttttttataatgaaaaagtcttgtggtattca 32125211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 35316979 - 35317023
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| ||||||| || |||||||||||||||||||||||    
T  35316979 gattttaaaaaacttttttatcatgaaaaagtcttgtggtattca 35317023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 305788 - 305715
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatacttttta-attatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | | |||||||||| |||||||  || |||||||||||||||||||||||    
T  305788 gggggtgtattggatcatgattctaagcgattttaaaagactttttttatcatgaaaaagtcttgtggtattca 305715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 9120057 - 9120129
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | | |||||||||| ||||||| || |||||||| || |||||||||||    
T  9120057 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaaatcatgtggtattca 9120129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 14783 - 14855
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  14783 ggggatgtattggatttggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattca 14855  T

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Target: chr6 (Bit Score: 61; Significance: 2e-26; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 31895583 - 31895655
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  31895583 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattca 31895655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 34773296 - 34773368
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||  ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  34773296 ggggatgtattggattaggattatatgggattttaaaagactttttaattatgaaaaagtcttgtggtattca 34773368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 14262751 - 14262679
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| | | |||||||||| ||||||||||||||||||| ||||||||||||||    
T  14262751 ggggatgtattggattaggattctacgggattttaaaagactttttaattatgaaaaaatcttgtggtattca 14262679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 7497005 - 7497077
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||||||| |||| |||||||||||||| | ||||||||||||||||||| || |||||||||    
T  7497005 ggggatgtattggattagaattctatgagattttaaaagattttttaattatgaaaaagtattctggtattca 7497077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 2301056 - 2300984
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | | |||||||||| ||||||| || |||||||||||||||||||||||    
T  2301056 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattca 2300984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 7051744 - 7051804
Alignment:
Q  166 gattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||| | |||||||||||| ||||||| || |||||||||||||||| ||||||    
T  7051744 gattaggattctaagagattttaaaagacttttttatcatgaaaaagtcttgtgatattca 7051804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 30385335 - 30385261
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatacttttt--aattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| |||||||||||||| | |||||  || |   ||||||||||||||||||||    
T  30385335 ggggatgtattggattaggattctatgagattttaaaagattttttgcaacttaaaaaaagtcttgtggtattca 30385261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 34759329 - 34759255
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatacttttt--aattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||||||||||| |||||||||||||| |||||||  || |   ||||||||||||||||||||    
T  34759329 gggggtgtattggattaggattctatgagattttaaaagactttttgcaacttaaaaaaagtcttgtggtattca 34759255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 6197796 - 6197724
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | | |||||||||| ||||||| || ||||||||||| |||||||||||    
T  6197796 gggggtgtattggatcatgattctaagggattttaaaaaacttttttatcatgaaaaagtcgtgtggtattca 6197724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 11007762 - 11007698
Alignment:
Q  160 gtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtatt 224  Q
    ||||||||||  |||| ||  ||||||||||| ||||||||| ||| ||||||||||||||||||    
T  11007762 gtattggattgagatttcaaaagattttaaaagactttttaaatataaaaaagtcttgtggtatt 11007698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 31609750 - 31609706
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||||    
T  31609750 gattttaaaagactttttaattataaaaaaatcttgtggtattca 31609706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 29076484 - 29076557
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatac-tttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | |||||||||||| || ||||| || |||||||||||||||| ||||||    
T  29076484 gggggtgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaagtcttgtgatattca 29076557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 29111457 - 29111530
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatac-tttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | |||||||||||| || ||||| || |||||||||||||||| ||||||    
T  29111457 gggggtgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaagtcttgtgatattca 29111530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 1391539 - 1391583
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||  ||||||| || |||||||||||||||||||||||    
T  1391539 gattttaaatgacttttttatcatgaaaaagtcttgtggtattca 1391583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 7100162 - 7100234
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| ||||||| ||| ||||| || | |||||||||| ||||||| |  |||||||||||| ||||||||||    
T  7100162 gggggtgtattgaattgggatttcaagggattttaaaagacttttttagaatgaaaaagtctagtggtattca 7100234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 8794468 - 8794396
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| ||||||| ||| ||||| || | |||||||||| ||||||| |  |||||||||||| ||||||||||    
T  8794468 gggggtgtattgaattgggatttcaagggattttaaaagacttttttagaatgaaaaagtctagtggtattca 8794396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 2e-26; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 4550575 - 4550503
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  4550575 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattca 4550503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 14000423 - 14000351
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  14000423 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattca 14000351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 37013803 - 37013874
Alignment:
Q  155 gggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  37013803 gggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattca 37013874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 1152421 - 1152351
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtatt 224  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||    
T  1152421 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaaatcttgtggtatt 1152351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 4240766 - 4240698
Alignment:
Q  158 atgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  4240766 atgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagttttgtggtattca 4240698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 154 - 225
Target Start/End: Original strand, 22746185 - 22746256
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattc 225  Q
    ||||||||||||||||||||||| ||   ||||||||| |||||||||||||||||||||||||||||||||    
T  22746185 ggggatgtattggattaggattctatagaattttaaaagactttttaattatgaaaaagtcttgtggtattc 22746256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 5948997 - 5949069
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||| |||||||||||||| ||| |||||||||| || |||||||||||||||| | ||||||||||||    
T  5948997 ggggatgtgttggattaggattctatgggattttaaaagaccttttaattatgaaaaatttttgtggtattca 5949069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 156 - 224
Target Start/End: Original strand, 13925821 - 13925889
Alignment:
Q  156 ggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtatt 224  Q
    |||||| |||||||||||||| ||  |||||||||| | ||||||||||||||||||||||||||||||    
T  13925821 ggatgtgttggattaggattctataggattttaaaagattttttaattatgaaaaagtcttgtggtatt 13925889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 7948630 - 7948563
Alignment:
Q  159 tgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||||||| ||  |||||||||| ||||||| ||||||||||||||| ||||||||||    
T  7948630 tgtattggattaggattctataggattttaaaagacttttttattatgaaaaagtctcgtggtattca 7948563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 40014017 - 40013948
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||||||||||||  || |||||||||| | ||||||||||||||||||||||||| ||||||    
T  40014017 ggggatgtattggattaggattc--tgggattttaaaaga-tttttaattatgaaaaagtcttgtgatattca 40013948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 27786213 - 27786280
Alignment:
Q  159 tgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||| |||| || | |||||||||| ||||||| ||||| ||||||||||||||||||||    
T  27786213 tgtattggattaagatttcaagggattttaaaagacttttttattataaaaaagtcttgtggtattca 27786280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 7017015 - 7016943
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | | |||||||||| ||||||| || |||||||||||||||||||||||    
T  7017015 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattca 7016943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 9689554 - 9689620
Alignment:
Q  159 tgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||| ||||| | | |||||||| | |||||||| |||||||||||||||||||||||||    
T  9689554 tgtattggattatgattctaagggattttaatagacttttta-ttatgaaaaagtcttgtggtattca 9689620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 21146955 - 21147027
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | | |||||||||| ||||||| || ||||||||||| |||||||||||    
T  21146955 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcgtgtggtattca 21147027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 26795569 - 26795526
Alignment:
Q  183 attttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||| ||||||| ||||| ||||||||||||||||||||    
T  26795569 attttaaaaaactttttgattataaaaaagtcttgtggtattca 26795526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 26806633 - 26806590
Alignment:
Q  183 attttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||| ||||||| ||||| ||||||||||||||||||||    
T  26806633 attttaaaaaactttttgattataaaaaagtcttgtggtattca 26806590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 32158188 - 32158145
Alignment:
Q  183 attttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||| ||||||| || |||||||||||||||||||||||    
T  32158188 attttaaaagacttttttatcatgaaaaagtcttgtggtattca 32158145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 28594529 - 28594456
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatacttttta-attatgaaaaagtcttgtggtattca 226  Q
    |||| |||||| |||| |||||  | |||||||||||| |||||||  ||||| ||||||||||||||||||||    
T  28594529 gggggtgtatttgattgggattttaagagattttaaaagactttttttattataaaaaagtcttgtggtattca 28594456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 43319134 - 43319207
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatacttttta-attatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | | |||||||||| |||||||  || |||||||||||||||||||||||    
T  43319134 gggggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattca 43319207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 1511642 - 1511598
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| || |||| ||||||||||||||||||||| ||||    
T  1511642 gattttaaaagacatttttattatgaaaaagtcttgtggtgttca 1511598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 6460708 - 6460752
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| | ||||| || |||||||||||||||||||||||    
T  6460708 gattttaaaagatttttttataatgaaaaagtcttgtggtattca 6460752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 26795691 - 26795647
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| ||||||| ||||| ||||| ||||||||||||||    
T  26795691 gattttaaaagacttttttattataaaaaaatcttgtggtattca 26795647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 33656333 - 33656289
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| | ||||| || |||||||||||||||||||||||    
T  33656333 gattttaaaagatttttttatcatgaaaaagtcttgtggtattca 33656289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 2e-26; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 5441291 - 5441363
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  5441291 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattca 5441363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 27767943 - 27768015
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  27767943 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattca 27768015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 29649986 - 29649914
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  29649986 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagttttgtggtattca 29649914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 54341031 - 54341103
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  54341031 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattca 54341103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 23987143 - 23987215
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||  ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  23987143 ggggatgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattca 23987215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 28483870 - 28483942
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  28483870 ggggatgtattgaattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgaggtattca 28483942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 49835126 - 49835060
Alignment:
Q  160 gtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  49835126 gtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattca 49835060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 37828719 - 37828649
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||||||| ||||  ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  37828719 ggggatgtattggattagaattc--tgagattttaaaagactttttaattatgaaaaagtcttgtggtattca 37828649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 37915672 - 37915744
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  37915672 gggggtgtattggattatgattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattca 37915744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 156 - 226
Target Start/End: Original strand, 32321980 - 32322050
Alignment:
Q  156 ggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||| || ||| ||||||| ||||||||||||||||||||| ||||||||||||    
T  32321980 ggatgtattggattaggattctatcagaatttaaaagactttttaattatgaaaaagttttgtggtattca 32322050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 50018142 - 50018210
Alignment:
Q  158 atgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||| |||| ||| |||||||||||| ||||||||||| ||||||||||||||||||||    
T  50018142 atgtattggattagaattctatgggattttaaaatattttttaattataaaaaagtcttgtggtattca 50018210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 54853787 - 54853715
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||  |||  ||||||||| |||||||||||| |||||||||||||||||||||    
T  54853787 ggggatgtattggattaggattttatggaattttaaaagactttttaattacgaaaaagtcttgtggtattca 54853715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 156 - 226
Target Start/End: Complemental strand, 30967616 - 30967546
Alignment:
Q  156 ggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||| ||||  ||| |||||||||| | ||||||||||||||||||||||||||||||||    
T  30967616 ggatgtattggattatgattttatgggattttaaaagattttttaattatgaaaaagtcttgtggtattca 30967546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 158 - 224
Target Start/End: Complemental strand, 49501828 - 49501762
Alignment:
Q  158 atgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtatt 224  Q
    ||||||| ||||||||||| ||| |||||||||| | ||||||||||||||||||||||||||||||    
T  49501828 atgtatttgattaggattctatgggattttaaaagattttttaattatgaaaaagtcttgtggtatt 49501762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 158 - 224
Target Start/End: Complemental strand, 49507893 - 49507827
Alignment:
Q  158 atgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtatt 224  Q
    ||||||| ||||||||||| ||| |||||||||| | ||||||||||||||||||||||||||||||    
T  49507893 atgtatttgattaggattctatgggattttaaaagattttttaattatgaaaaagtcttgtggtatt 49507827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 11090278 - 11090350
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||| |||| |||||||| | |||||||||||| ||||||||||||| || |||||||||||||||    
T  11090278 ggggatgtatttgattgggattccaagggattttaaaatattttttaattatgagaatgtcttgtggtattca 11090350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 51320808 - 51320880
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| | |  ||||||||| ||||||||||||||||||| | ||||||||||||    
T  51320808 ggggatgtattggattaggattctacggaattttaaaagactttttaattatgaaaaaattttgtggtattca 51320880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 224
Target Start/End: Original strand, 20021231 - 20021301
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtatt 224  Q
    |||||||||||||||||  |||  | | |||||||||| ||||||||||||||||||||||||||||||||    
T  20021231 ggggatgtattggattataattttaagggattttaaaagactttttaattatgaaaaagtcttgtggtatt 20021301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 34141685 - 34141627
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaag 212  Q
    ||||||||||||||||| ||||  |||||||||||||| ||||||||||||||||||||    
T  34141685 ggggatgtattggattaagattttatgagattttaaaagactttttaattatgaaaaag 34141627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 32684261 - 32684192
Alignment:
Q  157 gatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||| |||||||||| ||   ||||||||  ||||||||||||||||||||||||||||||||||    
T  32684261 gatgtattgaattaggattctatagaattttaaaggactttttaattatgaaaaagtcttgtggtattca 32684192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 12913110 - 12913182
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||| |||| |||||||| || | |||||||||||| | ||||||||| ||||||||||||||||||||||    
T  12913110 ggggatatattcgattaggaatctaagagattttaaaagattttttaattttgaaaaagtcttgtggtattca 12913182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 29855569 - 29855641
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||| |||||||||||||||| |||  ||||||||| | |||| |||||||||||||||||||| ||||||    
T  29855569 ggggatttattggattaggattctatggaattttaaaagatttttaaattatgaaaaagtcttgtgatattca 29855641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 36479506 - 36479436
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||||||| |||| | || ||||||||| | ||||||||||||||||||||||||||||||||    
T  36479506 ggggatgtattggattagaattctaaga-attttaaaaga-tttttaattatgaaaaagtcttgtggtattca 36479436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 28370859 - 28370925
Alignment:
Q  160 gtattggattaggattcca-tgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||| | ||| ||||||||  ||||||||||||||||||||||||||||||||||    
T  28370859 gtattggattaggattctaatga-attttaaaggactttttaattatgaaaaagtcttgtggtattca 28370925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 41725015 - 41725084
Alignment:
Q  157 gatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||| |||||||||| || | ||||||||| | ||||||||||| ||||||||||||| ||||||    
T  41725015 gatgtattgaattaggattctataaaattttaaaagattttttaattataaaaaagtcttgtgatattca 41725084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 25331018 - 25331090
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| |  ||||||||||| ||||||| || |||||||||||||||||||||||    
T  25331018 gggggtgtattggatcatgattctaaaagattttaaaagacttttttatcatgaaaaagtcttgtggtattca 25331090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 25504930 - 25504886
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||||||| || |||||||||||||||||||||||    
T  25504930 gattttaaaatacttttttatcatgaaaaagtcttgtggtattca 25504886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 24131286 - 24131219
Alignment:
Q  159 tgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| | ||||| | | |||||||||| ||||||| || |||||||||||||||||||||||    
T  24131286 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattca 24131219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 28541590 - 28541657
Alignment:
Q  159 tgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| | ||||| | | |||||||||| || |||| ||||||||||||||||||||||||||    
T  28541590 tgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaagtcttgtggtattca 28541657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 6334513 - 6334460
Alignment:
Q  155 gggatgtattggattaggattccatgagattttaaaatactttttaattatgaa 208  Q
    ||||||| |||||||||||||| | |||||||||||| | ||||||||||||||    
T  6334513 gggatgtgttggattaggattctaagagattttaaaagaatttttaattatgaa 6334460  T

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Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 6335463 - 6335410
Alignment:
Q  155 gggatgtattggattaggattccatgagattttaaaatactttttaattatgaa 208  Q
    ||||||| |||||||||||||| | |||||||||||| | ||||||||||||||    
T  6335463 gggatgtgttggattaggattctaagagattttaaaagaatttttaattatgaa 6335410  T

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Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 36728104 - 36728059
Alignment:
Q  181 agattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||| | |||||||||||||||||||||||| |||||||    
T  36728104 agattttaaaagattttttaattatgaaaaagtcttgtagtattca 36728059  T

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Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 1044697 - 1044769
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | | |||||||||| | ||||| || |||||||||||||||||||||||    
T  1044697 gggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattca 1044769  T

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Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 22201902 - 22201974
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | | |||||||||| ||||||| || |||||||||||||||| ||||||    
T  22201902 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattca 22201974  T

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Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 32951127 - 32951083
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| ||||||| || |||||||||||||||||||||||    
T  32951127 gattttaaaagacttttttataatgaaaaagtcttgtggtattca 32951083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 34228873 - 34228829
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| ||||||| || |||||||||||||||||||||||    
T  34228873 gattttaaaagacttttttatcatgaaaaagtcttgtggtattca 34228829  T

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Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 44646719 - 44646791
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| ||||||| || | |||| || |||||||||||| |||||||||| || ||||| ||||||||||||||    
T  44646719 gggggtgtattgaatcaagatttcaagagattttaaaagactttttaatgataaaaaaatcttgtggtattca 44646791  T

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Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 46635957 - 46635889
Alignment:
Q  159 tgtattggattaggattccatgagattttaaaatactttttaattatg-aaaaagtcttgtggtattca 226  Q
    |||||||||| | ||||| | |||||||||||| ||||||| || ||| ||||||||||||||||||||    
T  46635957 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaagtcttgtggtattca 46635889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 224
Target Start/End: Original strand, 5799872 - 5799934
Alignment:
Q  161 tattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtatt 224  Q
    |||| ||||||||||  ||| |||||||||| |||||||||||||| |||||| ||||||||||    
T  5799872 tattagattaggattttatgggattttaaaagactttttaattatg-aaaagttttgtggtatt 5799934  T

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Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 467773 - 467842
Alignment:
Q  157 gatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||| |||||   |  ||||||||| | ||||||||||||||||||| |||| |||||||    
T  467773 gatgtattggattatgattcttaggaattttaaaagattttttaattatgaaaaagttttgtcgtattca 467842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 28100669 - 28100596
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatacttttta-attatgaaaaagtcttgtggtattca 226  Q
    |||| ||||||||||| ||||| || | | |||||||| |||||||  ||||| ||||||||||||||||||||    
T  28100669 gggggtgtattggattgggatttcaaggggttttaaaagactttttttattataaaaaagtcttgtggtattca 28100596  T

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Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 42786654 - 42786727
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatacttttta-attatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | | |||||||||| |||||||  || |||||||||||||||||||||||    
T  42786654 gggggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattca 42786727  T

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Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 24736335 - 24736402
Alignment:
Q  158 atgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||| | |  ||||||||| | |||||||||||| ||| |||||||| ||||||    
T  24736335 atgtattggattaggattctaaggaattttaaaagattttttaattatg-aaatgtcttgtgatattca 24736402  T

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Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 30009996 - 30009924
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | | |||||||||| || |||| |||||||||||||||| | |||||||    
T  30009996 gggggtgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaagtcttattgtattca 30009924  T

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Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 38230770 - 38230842
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| ||||||| ||| ||||| || | |||||||||| ||||||| |  |||||||||||| ||||||||||    
T  38230770 gggggtgtattgaattgggatttcaagggattttaaaagacttttttagaatgaaaaagtctagtggtattca 38230842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 39479676 - 39479604
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||  | || ||||||||| ||||||| || || ||||||||||||||||||||    
T  39479676 gggggtgtattggatcatgattttaagaaattttaaaagacttttttatcataaaaaagtcttgtggtattca 39479604  T

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Target: chr1 (Bit Score: 61; Significance: 2e-26; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 6312455 - 6312527
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  6312455 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattca 6312527  T

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Target: chr1; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 9322819 - 9322747
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  9322819 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattca 9322747  T

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Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 15835371 - 15835300
Alignment:
Q  155 gggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  15835371 gggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattca 15835300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 5495412 - 5495343
Alignment:
Q  157 gatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||    
T  5495412 gatgtattggattaggattctatgagattttaaaaaactttttaattatgaaaaagtcatgtggtattca 5495343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 8141447 - 8141375
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||| |||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  8141447 ggggatgtattgaattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattca 8141375  T

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Target: chr1; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 25612038 - 25612110
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||| ||||||||||||||    
T  25612038 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaaatcttgtggtattca 25612110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 29396707 - 29396635
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| |||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  29396707 ggggatgtattggattaggattctatggtattttaaaagactttttaattatgaaaaagtcttgtggtattca 29396635  T

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Target: chr1; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 18798380 - 18798444
Alignment:
Q  162 attggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||    
T  18798380 attggattaggattctatgagattttaaaagactttttaattatgaaaatgtcttgtggtattca 18798444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 28387712 - 28387640
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||| |||||||||||||||| ||| |||||||||| |||||||||||||||||||||||| |||||||||    
T  28387712 ggggatttattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttatggtattca 28387640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 29219169 - 29219241
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||  |||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  29219169 ggggatgtattggattaggattatatggaattttaaaagactttttaattatgaaaaagtcttgtggtattca 29219241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 46327923 - 46327995
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||| ||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||| ||||||    
T  46327923 ggggatgcattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtgttattca 46327995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 49230767 - 49230839
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||  ||| |||||||||| |||||||||||||||||||||| |||||||||||    
T  49230767 ggggatgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcatgtggtattca 49230839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 9577751 - 9577679
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| | | |||||||||| |||||||||| |||||||||| ||||||||||||    
T  9577751 ggggatgtattggattaggattcgaagggattttaaaagactttttaatgatgaaaaagttttgtggtattca 9577679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 42290725 - 42290797
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||| |||||||||| ||||| ||| |||||||||| | ||||||||||||||||||||||||||||||||    
T  42290725 ggggatttattggattaagattctatgggattttaaaagattttttaattatgaaaaagtcttgtggtattca 42290797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 45272468 - 45272540
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||| | ||||||||||||    
T  45272468 ggggatgtattggattaagattctatgggattttaaaagactttttaattatgaaaaaatattgtggtattca 45272540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 48177777 - 48177709
Alignment:
Q  158 atgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||| ||||| ||| |||||||||||  ||||||||||||||||||||||||||||||||    
T  48177777 atgtattggattaagattctatgggattttaaaatgttttttaattatgaaaaagtcttgtggtattca 48177709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 38536366 - 38536294
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||| |||||||||  ||| |||||||||| |||||||| |||| ||||||||||||||||||||    
T  38536366 ggggatgtattgaattaggattatatgggattttaaaagactttttatttataaaaaagtcttgtggtattca 38536294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 38558584 - 38558512
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||| |||||||||  ||| |||||||||| |||||||| |||| ||||||||||||||||||||    
T  38558584 ggggatgtattgaattaggattatatgggattttaaaagactttttatttataaaaaagtcttgtggtattca 38558512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 42657712 - 42657784
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||||  |||| || |||||||||||| ||||||||||||| ||||||||||||||||||||    
T  42657712 gggggtgtattggattgagatttcaagagattttaaaagactttttaattataaaaaagtcttgtggtattca 42657784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 32589273 - 32589201
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||| ||||| |||||||||||||| ||||||| || ||||||||||  ||| |||||||    
T  32589273 ggggatgtattggattatgattctatgagattttaaaaaacttttttatcatgaaaaagttatgttgtattca 32589201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 35279558 - 35279625
Alignment:
Q  159 tgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| | ||||| | |||||||||||| ||||||| || |||||||||||||||||||||||    
T  35279558 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcttgtggtattca 35279625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 953700 - 953772
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | | |||||||||| ||||||| || |||||||||||||||||||||||    
T  953700 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattca 953772  T

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Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 28824691 - 28824619
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | | |||||||||| ||||||| || |||||||||||||||||||||||    
T  28824691 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattca 28824619  T

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Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 50192841 - 50192798
Alignment:
Q  183 attttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||    
T  50192841 attttaaaagacttttttattatgaaaaagtcttgtggtattca 50192798  T

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Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 49198591 - 49198514
Alignment:
Q  149 atcttggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||| ||| |||||||||| | ||||| | |  ||||||||| ||||||| || |||||||||||||||||||||||    
T  49198591 atcttaggggtgtattggatcatgattctaaggaattttaaaagacttttttatcatgaaaaagtcttgtggtattca 49198514  T

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Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 19452169 - 19452097
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | | |||||||||| ||||||| ||  ||||||||||||||||||||||    
T  19452169 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcttgaaaaagtcttgtggtattca 19452097  T

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Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 21222029 - 21222101
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | | ||||||||||  |||||| || |||||||||||||||||||||||    
T  21222029 gggggtgtattggatcatgattctaagggattttaaaaggcttttttatcatgaaaaagtcttgtggtattca 21222101  T

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Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 22183279 - 22183323
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| ||||||| || |||||||||||||||||||||||    
T  22183279 gattttaaaagacttttttatcatgaaaaagtcttgtggtattca 22183323  T

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Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 33025393 - 33025465
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | |||| ||||||| ||||||| || |||||||| ||||||||||||||    
T  33025393 gggggtgtattggatcatgattctaagagaatttaaaagacttttttatcatgaaaaaatcttgtggtattca 33025465  T

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Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 35679419 - 35679375
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| ||||||| || |||||||||||||||||||||||    
T  35679419 gattttaaaagacttttttataatgaaaaagtcttgtggtattca 35679375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 45760329 - 45760257
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | | |||||||||| | ||||| || |||||||||||||||||||||||    
T  45760329 gggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattca 45760257  T

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Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 42055116 - 42055175
Alignment:
Q  159 tgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgt 218  Q
    ||||||| |||||||||  |||||||||||||| |||||||||  || ||||||||||||    
T  42055116 tgtattgaattaggattatatgagattttaaaaaactttttaaaaataaaaaagtcttgt 42055175  T

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Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 47780505 - 47780572
Alignment:
Q  159 tgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| | ||||| | || ||||||||| | ||||| || |||||||||||||||||||||||    
T  47780505 tgtattggatcatgattctaagaaattttaaaagatttttttatcatgaaaaagtcttgtggtattca 47780572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 226
Target Start/End: Complemental strand, 19684751 - 19684681
Alignment:
Q  156 ggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||||||||| |  | ||||||||||| |||||||| |  ||||||||||||| ||||||    
T  19684751 ggatatattggattaggattctaaaatattttaaaatattttttaatgaaaaaaaagtcttgtgatattca 19684681  T

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Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 49417972 - 49418037
Alignment:
Q  161 tattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||| | ||||| | |||||||||||| ||||||| || ||||||||||| |||| ||||||    
T  49417972 tattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcatgtgatattca 49418037  T

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Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 730030 - 730101
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | | |||||||||| |||||||  | |||||||||||||||||||||||    
T  730030 gggggtgtattggatcatgattctaagggattttaaaagactttttt-tcatgaaaaagtcttgtggtattca 730101  T

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Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 6304545 - 6304501
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| |||||||  | |||||||||||||||||||||||    
T  6304545 gattttaaaagacttttttttcatgaaaaagtcttgtggtattca 6304501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 19007637 - 19007593
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| ||||||| || |||||||||||| ||||||||||    
T  19007637 gattttaaaagacttttttataatgaaaaagtctagtggtattca 19007593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 27198297 - 27198341
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| |||||||  |||| ||||||||||||||||||||    
T  27198297 gattttaaaagactttttgtttataaaaaagtcttgtggtattca 27198341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 31572454 - 31572410
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||| | ||||||| || |||||||||||||||||||||||    
T  31572454 gattttaagagacttttttatcatgaaaaagtcttgtggtattca 31572410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 48194588 - 48194660
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| ||||||| ||| ||||| || | |||||||||| ||||||| |  |||||||||||| ||||||||||    
T  48194588 gggggtgtattgaattgggatttcaagggattttaaaagacttttttagaatgaaaaagtctagtggtattca 48194660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 48203346 - 48203418
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| ||||||| ||| ||||| || | |||||||||| ||||||| |  |||||||||||| ||||||||||    
T  48203346 gggggtgtattgaattgggatttcaagggattttaaaagacttttttagaatgaaaaagtctagtggtattca 48203418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 51826894 - 51826850
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| |||||||||| || ||||| ||||||||||||||    
T  51826894 gattttaaaagactttttaataataaaaaaatcttgtggtattca 51826850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 10452 - 10520
Alignment:
Q  158 atgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  10452 atgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattca 10520  T

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Target: scaffold1504 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 755 - 823
Alignment:
Q  158 atgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||||| ||||||||||||||    
T  755 atgtattggattaggattctatgggattttaaaagactttttaattatgaaaaattcttgtggtattca 823  T

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Target: scaffold0922 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 4088 - 4160
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||||||||||||||| ||  |||||||||| ||||||||||| ||||||||||||||||||||||    
T  4088 ggggatgtattggattaggattctataggattttaaaagactttttaattttgaaaaagtcttgtggtattca 4160  T

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Target: scaffold0492 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 12091 - 12030
Alignment:
Q  155 gggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtctt 216  Q
    |||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||    
T  12091 gggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtctt 12030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 11998 - 12056
Alignment:
Q  158 atgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtctt 216  Q
    ||||||||||||||||||| ||| |||||||||| ||||||| || || ||||||||||    
T  11998 atgtattggattaggattctatgggattttaaaagactttttcataattaaaaagtctt 12056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 37133 - 37070
Alignment:
Q  163 ttggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||||||  ||| |||||||||| ||||||||||||||||||||||||||| ||||||    
T  37133 ttggattaggattatatgggattttaaaagactttttaattatgaaaaagtcttgtgctattca 37070  T

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Target: scaffold0110 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 39918 - 39864
Alignment:
Q  172 gattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||| |||||||||||||| || |||||||||||||||||||||||||||||||    
T  39918 gattctatgagattttaaaagaccttttaattatgaaaaagtcttgtggtattca 39864  T

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Target: scaffold0113 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 39144 - 39100
Alignment:
Q  182 gattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||||||||| ||||||| || |||||||||||||||||||||||    
T  39144 gattttaaaagacttttttatcatgaaaaagtcttgtggtattca 39100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 11869 - 11802
Alignment:
Q  159 tgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    ||||||||||| ||||| |  | |||||||||| ||||||| ||||| ||||||||||||| ||||||    
T  11869 tgtattggattcggatttctagggattttaaaagacttttttattataaaaaagtcttgtgatattca 11802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 100099 - 100171
Alignment:
Q  154 ggggatgtattggattaggattccatgagattttaaaatactttttaattatgaaaaagtcttgtggtattca 226  Q
    |||| |||||||||| | ||||| | | |||||||||| ||||||| || ||||||||||||| || ||||||    
T  100099 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttctgatattca 100171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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