View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20885_low_78 (Length: 211)
Name: NF20885_low_78
Description: NF20885
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20885_low_78 |
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Alignment Details
Target: chr7 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 14 - 183
Target Start/End: Original strand, 33599254 - 33599423
Alignment:
| Q |
14 |
gaatattcacataattaaacattaaaaatatatcaaaataatcaacaaataggaaaatacttgtgttcggatagcttgttcataaagggagttacatcag |
113 |
Q |
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| T |
33599254 |
gaatattcacataattaaacattaaaaatatatcaaaataatcaacaaataggaaaatacttgtgttcggatagcttgttcataaagggagttacatcag |
33599353 |
T |
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| Q |
114 |
cctccaaagctgacatgtgtctaaatggatttttagccttgcaccaacaatatgtatcaaacataaaagg |
183 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
33599354 |
cctccaaagctgacatgtgtctaaatggatttttagccctgcaccaacaatatgtatcaaacataaaagg |
33599423 |
T |
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