View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20886_low_1 (Length: 543)

Name: NF20886_low_1
Description: NF20886
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20886_low_1
NF20886_low_1
[»] chr4 (14 HSPs)
chr4 (322-532)||(42745610-42745820)
chr4 (322-532)||(42754971-42755181)
chr4 (320-530)||(42764774-42764987)
chr4 (139-231)||(42745804-42745896)
chr4 (414-531)||(42732279-42732397)
chr4 (394-459)||(42765325-42765390)
chr4 (18-82)||(42755943-42756006)
chr4 (154-231)||(42755165-42755242)
chr4 (247-311)||(21623409-21623473)
chr4 (251-288)||(16733513-16733550)
chr4 (247-287)||(2086743-2086783)
chr4 (251-307)||(43034336-43034392)
chr4 (247-287)||(43155110-43155150)
chr4 (251-307)||(47814245-47814301)
[»] chr5 (5 HSPs)
chr5 (139-393)||(23036595-23036837)
chr5 (18-82)||(23036474-23036538)
chr5 (247-307)||(3389173-3389233)
chr5 (260-307)||(20927650-20927697)
chr5 (269-332)||(12197715-12197781)
[»] scaffold0118 (1 HSPs)
scaffold0118 (247-307)||(40009-40069)
[»] chr8 (6 HSPs)
chr8 (258-308)||(15020771-15020821)
chr8 (251-312)||(25136838-25136899)
chr8 (258-307)||(32421580-32421629)
chr8 (250-307)||(42829468-42829525)
chr8 (251-307)||(13357435-13357491)
chr8 (251-307)||(40679723-40679779)
[»] chr1 (5 HSPs)
chr1 (258-307)||(27172723-27172772)
chr1 (251-307)||(15854082-15854138)
chr1 (247-311)||(25532980-25533044)
chr1 (251-307)||(34521184-34521240)
chr1 (251-307)||(34632180-34632236)
[»] chr7 (4 HSPs)
chr7 (251-307)||(15492282-15492338)
chr7 (251-307)||(16577854-16577910)
chr7 (251-307)||(16587752-16587808)
chr7 (251-307)||(38326850-38326906)
[»] chr6 (1 HSPs)
chr6 (247-287)||(8809337-8809377)
[»] chr3 (1 HSPs)
chr3 (251-307)||(35863807-35863863)
[»] chr2 (2 HSPs)
chr2 (255-311)||(29872170-29872226)
chr2 (247-287)||(30978393-30978433)


Alignment Details
Target: chr4 (Bit Score: 175; Significance: 6e-94; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 322 - 532
Target Start/End: Complemental strand, 42745820 - 42745610
Alignment:
Q  322 aatcacataaattagtatataagcgagggaaaacacataccctttgtacatccctaaaatttattttgaaaaacaaacatcattcatgagagaaacaatg 421  Q
    ||||||| |||||||||||||||||| ||| | ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42745820 aatcacagaaattagtatataagcgaaggagagcacatacactttgtatatccctaaaatttattttgaaaaacaaacatcattcatgagagaaacaatg 42745721  T
Q  422 tcttcatacattgctcatgtgttaatgtcacttcttctttttgttttactgcaggaacctacccttgcaattaaacaggcaagcttattttctcaaattt 521  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42745720 tcttcatccatttctcatgtgttaatgtcacttcttctttttgttttactgcaggaacctacccttgcaattaaacaggcaagattattttctcaaattt 42745621  T
Q  522 tcattattcat 532  Q
    |||||||||||    
T  42745620 tcattattcat 42745610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 322 - 532
Target Start/End: Complemental strand, 42755181 - 42754971
Alignment:
Q  322 aatcacataaattagtatataagcgagggaaaacacataccctttgtacatccctaaaatttattttgaaaaacaaacatcattcatgagagaaacaatg 421  Q
    ||||||| ||| |||||||||||||| ||| | ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42755181 aatcacagaaaatagtatataagcgaaggagagcacatacactttgtatatccctaaaatttattttgaaaaacaaacatcattcatgagagaaacaatg 42755082  T
Q  422 tcttcatacattgctcatgtgttaatgtcacttcttctttttgttttactgcaggaacctacccttgcaattaaacaggcaagcttattttctcaaattt 521  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42755081 tcttcatccatttctcatgtgttaatgtcacttcttctttttgttttactgcaggaacctacccttgcaattaaacaggcaagattattttctcaaattt 42754982  T
Q  522 tcattattcat 532  Q
    |||||||||||    
T  42754981 tcattattcat 42754971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 320 - 530
Target Start/End: Complemental strand, 42764987 - 42764774
Alignment:
Q  320 acaatcacataaattagt-atataagcgagggaaaacacataccctttgtacatccctaaaattt-attttgaaaaacaaacatcattcatgagagaaac 417  Q
    |||||||||||| ||||| ||||||| |||||||||||||||||||||||| |||| | | |||| |||||| | ||||||||||||||||||||||| |    
T  42764987 acaatcacataacttagttatataagtgagggaaaacacataccctttgtatatccttgagattttattttgcataacaaacatcattcatgagagaagc 42764888  T
Q  418 aatgtcttcatacattgctcatgtgttaatgtcacttcttctttttgttttactgcaggaacctacccttgcaattaaacaggc-aagcttattttctca 516  Q
    ||||||||||| |||| ||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||| ||||     
T  42764887 aatgtcttcatccatttctcatgtgttaatatcacttcttctttttgttttgctgcatgaacctacccttgcaattaaacaggcaaagcttattgtctct 42764788  T
Q  517 aattttcattattc 530  Q
      ||||||||||||    
T  42764787 tgttttcattattc 42764774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 42745896 - 42745804
Alignment:
Q  139 tgaagaatgaacttgaccacaacacttgactccattacaaataatggttgttcacatgagaaatttggtaagaatcaattacagaaattagta 231  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||  | |||||||||| ||| ||| |||||||||||||    
T  42745896 tgaagaatgaacttgaccacaatagttgactccattacaaataatggttgttcacattgggaatttggtaaaaattaatcacagaaattagta 42745804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 414 - 531
Target Start/End: Original strand, 42732279 - 42732397
Alignment:
Q  414 aaacaatgtcttcatacattgctcatgtgttaatgtcacttcttctttttgttttactgcaggaac---ctacccttgcaattaaacaggcaagcttatt 510  Q
    |||||||||| |||| ||||  ||||||||| |  | ||||||||||||||||||  |||||||||   |||||||||||||||||||||||||||  ||    
T  42732279 aaacaatgtcatcatccatttgtcatgtgttgacattacttcttctttttgttttgatgcaggaacatcctacccttgcaattaaacaggcaagct--tt 42732376  T
Q  511 ttctcaaattttcattattca 531  Q
     |||||| |||||||||||||    
T  42732377 gtctcaagttttcattattca 42732397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 394 - 459
Target Start/End: Complemental strand, 42765390 - 42765325
Alignment:
Q  394 acaaacatcattcatgagagaaacaatgtcttcatacattgctcatgtgttaatgtcacttcttct 459  Q
    |||||||||||||||||||||| |||||||||||| ||||  |||||||||||| |||||||||||    
T  42765390 acaaacatcattcatgagagaagcaatgtcttcatccatttgtcatgtgttaatatcacttcttct 42765325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 42756006 - 42755943
Alignment:
Q  18 ctaccatgaaaacttccttgtttggaaataatagtactggtttcttaccaagaaaacaaaaatgc 82  Q
    |||||||||||| ||||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  42756006 ctaccatgaaaa-ttccttgtttggaaataatagtacctgtttcttaccatgaaaacaaaaatgc 42755943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 42755242 - 42755165
Alignment:
Q  154 accacaacacttgactccattacaaataatggttgttcacatgagaaatttggtaagaatcaattacagaaattagta 231  Q
    ||||||| | |||||| |||||||||||||||||||||||||  | |||||||||| ||| ||| ||||||| |||||    
T  42755242 accacaatagttgacttcattacaaataatggttgttcacattgggaatttggtaaaaattaatcacagaaaatagta 42755165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 311
Target Start/End: Original strand, 21623409 - 21623473
Alignment:
Q  247 gtgatggccgaggtttgaacctctgatcttgcatatattatatttcgtccataccaactgaacta 311  Q
    |||||||||||||||| |||||| || ||||||||||||||   | |||| ||||||||||||||    
T  21623409 gtgatggccgaggtttaaacctcagaccttgcatatattatgcattgtccctaccaactgaacta 21623473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 288
Target Start/End: Original strand, 16733513 - 16733550
Alignment:
Q  251 tggccgaggtttgaacctctgatcttgcatatattata 288  Q
    ||||||||| ||||||||| ||||||||||||||||||    
T  16733513 tggccgagggttgaacctcggatcttgcatatattata 16733550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 247 - 287
Target Start/End: Original strand, 2086743 - 2086783
Alignment:
Q  247 gtgatggccgaggtttgaacctctgatcttgcatatattat 287  Q
    |||||||||| ||||||||| || |||||||||||||||||    
T  2086743 gtgatggccgcggtttgaacttcagatcttgcatatattat 2086783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 43034336 - 43034392
Alignment:
Q  251 tggccgaggtttgaacctctgatcttgcatatattatatttcgtccataccaactga 307  Q
    |||||| |||||||||||| || ||||||||||||||   | |||||||||||||||    
T  43034336 tggccggggtttgaacctcagaccttgcatatattatgcattgtccataccaactga 43034392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 247 - 287
Target Start/End: Complemental strand, 43155150 - 43155110
Alignment:
Q  247 gtgatggccgaggtttgaacctctgatcttgcatatattat 287  Q
    ||||||| || |||||||||||| |||||||||||||||||    
T  43155150 gtgatggtcggggtttgaacctcagatcttgcatatattat 43155110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 47814245 - 47814301
Alignment:
Q  251 tggccgaggtttgaacctctgatcttgcatatattatatttcgtccataccaactga 307  Q
    |||||| |||||||||| | || |||||||||||||| | | |||||||||||||||    
T  47814245 tggccggggtttgaaccccggaccttgcatatattatgtgttgtccataccaactga 47814301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 6e-63; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 139 - 393
Target Start/End: Original strand, 23036595 - 23036837
Alignment:
Q  139 tgaagaatgaacttgaccacaacacttgactccattacaaataatggttgttcacatgagaaatttggtaagaatcaattacagaaattagtannnnnnn 238  Q
    |||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||| |           
T  23036595 tgaagaatgaacttgaccacaacagttgactccattacaaataacagttgttcacatgagaaatttggtaagaatcaatcacagaaattagcatattttt 23036694  T
Q  239 nnnnnnnngtgatggccgaggtttgaacctctgatcttgcatatattatatttcgtccataccaactgaactatcacgaggacaatcacataaattagta 338  Q
             || |||| ||||||||||||||| | |||||||||||||| ||| ||||||||||||||| ||||||||| |||||      |||||||||    
T  23036695 ttt------tggtggctgaggtttgaacctctaaccttgcatatattatgttttgtccataccaactgagctatcacgaagacaa------aaattagta 23036782  T
Q  339 tataagcgagggaaaacacataccctttgtacatccctaaaatttattttgaaaa 393  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23036783 tataagcgagggaaagcacataccctttgtacatccctaaaatttattttgaaaa 23036837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 23036474 - 23036538
Alignment:
Q  18 ctaccatgaaaacttccttgtttggaaataatagtactggtttcttaccaagaaaacaaaaatgc 82  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  23036474 ctaccatgaaaacttccttgtttggaaataatagtaccggtttcttaccatgaaaacaaaaatgc 23036538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 307
Target Start/End: Complemental strand, 3389233 - 3389173
Alignment:
Q  247 gtgatggccgaggtttgaacctctgatcttgcatatattatatttcgtccataccaactga 307  Q
    ||||||||||| ||||||||| | |||||||||||||||||   | |||||||||||||||    
T  3389233 gtgatggccgatgtttgaaccccagatcttgcatatattatgcattgtccataccaactga 3389173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 307
Target Start/End: Complemental strand, 20927697 - 20927650
Alignment:
Q  260 tttgaacctctgatcttgcatatattatatttcgtccataccaactga 307  Q
    |||||||||| ||||||||||||||||| | | |||||||||||||||    
T  20927697 tttgaacctcggatcttgcatatattatgtattgtccataccaactga 20927650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 269 - 332
Target Start/End: Complemental strand, 12197781 - 12197715
Alignment:
Q  269 ctgatcttgcatatattatatttcgtccataccaactgaacta---tcacgaggacaatcacataaa 332  Q
    |||||||||||||||||| |||| ||| ||| ||||||| |||   ||||||||||||||| |||||    
T  12197781 ctgatcttgcatatattagattttgtctatatcaactgagctaagttcacgaggacaatcaaataaa 12197715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 307
Target Start/End: Complemental strand, 40069 - 40009
Alignment:
Q  247 gtgatggccgaggtttgaacctctgatcttgcatatattatatttcgtccataccaactga 307  Q
    |||||| ||||||||||||||||| | ||||||||||||||   | |||||||||||||||    
T  40069 gtgatgtccgaggtttgaacctctaaccttgcatatattatgcattgtccataccaactga 40009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 31; Significance: 0.00000005; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 258 - 308
Target Start/End: Complemental strand, 15020821 - 15020771
Alignment:
Q  258 ggtttgaacctctgatcttgcatatattatatttcgtccataccaactgaa 308  Q
    |||||||||| | ||||||||||||||||||  | ||||||||||||||||    
T  15020821 ggtttgaaccccggatcttgcatatattatacattgtccataccaactgaa 15020771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 312
Target Start/End: Original strand, 25136838 - 25136899
Alignment:
Q  251 tggccgaggtttgaacctctgatcttgcatatattatatttcgtccataccaactgaactat 312  Q
    ||||||||||||||||||| || ||||||||| ||||   | ||||||||||||||| ||||    
T  25136838 tggccgaggtttgaacctcggaccttgcatattttatgccttgtccataccaactgagctat 25136899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 307
Target Start/End: Complemental strand, 32421629 - 32421580
Alignment:
Q  258 ggtttgaacctctgatcttgcatatattatatttcgtccataccaactga 307  Q
    |||||||||| | || |||||||||||||||| | |||||||||||||||    
T  32421629 ggtttgaaccccggaccttgcatatattatatattgtccataccaactga 32421580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 42829468 - 42829525
Alignment:
Q  250 atggccgaggtttgaacctctgatcttgcatatattatatttcgtccataccaactga 307  Q
    ||||||| |||| ||||| | || ||||||||| |||||||| |||||||||||||||    
T  42829468 atggccggggttcgaaccccagaccttgcatattttatattttgtccataccaactga 42829525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 13357435 - 13357491
Alignment:
Q  251 tggccgaggtttgaacctctgatcttgcatatattatatttcgtccataccaactga 307  Q
    |||||||||||||||||||  | ||||||||||||||   | |||||||||||||||    
T  13357435 tggccgaggtttgaacctcgtaccttgcatatattatgcattgtccataccaactga 13357491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 40679723 - 40679779
Alignment:
Q  251 tggccgaggtttgaacctctgatcttgcatatattatatttcgtccataccaactga 307  Q
    ||||||||||||||||| | || ||||||||| |||||| | | |||||||||||||    
T  40679723 tggccgaggtttgaaccccggaccttgcatattttatatattgaccataccaactga 40679779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 30; Significance: 0.0000002; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 307
Target Start/End: Original strand, 27172723 - 27172772
Alignment:
Q  258 ggtttgaacctctgatcttgcatatattatatttcgtccataccaactga 307  Q
    |||||||||||  || |||||||||||||| ||| |||||||||||||||    
T  27172723 ggtttgaaccttggagcttgcatatattatgttttgtccataccaactga 27172772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 15854082 - 15854138
Alignment:
Q  251 tggccgaggtttgaacctctgatcttgcatatattatatttcgtccataccaactga 307  Q
    ||||||||||||||| |   |||||||||||||||||   |||||||||||||||||    
T  15854082 tggccgaggtttgaatcctggatcttgcatatattatgcatcgtccataccaactga 15854138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 247 - 311
Target Start/End: Complemental strand, 25533044 - 25532980
Alignment:
Q  247 gtgatggccgaggtttgaacctctgatcttgcatatattatatttcgtccataccaactgaacta 311  Q
    ||||| |||| |||||||||| | || ||||||||||||||   | |||||||||||||||||||    
T  25533044 gtgatagccggggtttgaaccccggaccttgcatatattatgcattgtccataccaactgaacta 25532980  T

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Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 34521184 - 34521240
Alignment:
Q  251 tggccgaggtttgaacctctgatcttgcatatattatatttcgtccataccaactga 307  Q
    ||||||||||||||||| | || ||||||||||||||   | |||||||||||||||    
T  34521184 tggccgaggtttgaaccccggaccttgcatatattatgcattgtccataccaactga 34521240  T

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Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 251 - 307
Target Start/End: Complemental strand, 34632236 - 34632180
Alignment:
Q  251 tggccgaggtttgaacctctgatcttgcatatattatatttcgtccataccaactga 307  Q
    |||||| | |||||||||| ||||||||||||||||||  | ||| |||||||||||    
T  34632236 tggccgggatttgaacctcggatcttgcatatattatacattgtctataccaactga 34632180  T

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Target: chr7 (Bit Score: 29; Significance: 0.0000008; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 15492282 - 15492338
Alignment:
Q  251 tggccgaggtttgaacctctgatcttgcatatattatatttcgtccataccaactga 307  Q
    |||||||||||||||||||  ||||||||||| |||||  | ||||||| |||||||    
T  15492282 tggccgaggtttgaacctcaaatcttgcatattttatacattgtccatatcaactga 15492338  T

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Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 16577854 - 16577910
Alignment:
Q  251 tggccgaggtttgaacctctgatcttgcatatattatatttcgtccataccaactga 307  Q
    ||||||||||||||||| | || |||||||||||||| | | |||| ||||||||||    
T  16577854 tggccgaggtttgaaccccagaccttgcatatattatgtattgtccctaccaactga 16577910  T

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Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 251 - 307
Target Start/End: Complemental strand, 16587808 - 16587752
Alignment:
Q  251 tggccgaggtttgaacctctgatcttgcatatattatatttcgtccataccaactga 307  Q
    ||||||||||||||||| | || |||||||||||||| | | |||| ||||||||||    
T  16587808 tggccgaggtttgaaccccagaccttgcatatattatgtattgtccctaccaactga 16587752  T

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Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 38326850 - 38326906
Alignment:
Q  251 tggccgaggtttgaacctctgatcttgcatatattatatttcgtccataccaactga 307  Q
    |||||| ||||| |||||| || ||||||| |||||| ||| |||||||||||||||    
T  38326850 tggccggggtttcaacctcggaccttgcatgtattatgttttgtccataccaactga 38326906  T

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Target: chr6 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 247 - 287
Target Start/End: Complemental strand, 8809377 - 8809337
Alignment:
Q  247 gtgatggccgaggtttgaacctctgatcttgcatatattat 287  Q
    ||||||| || |||||||||||| |||||||||||||||||    
T  8809377 gtgatggtcggggtttgaacctcggatcttgcatatattat 8809337  T

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Target: chr3 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 35863807 - 35863863
Alignment:
Q  251 tggccgaggtttgaacctctgatcttgcatatattatatttcgtccataccaactga 307  Q
    ||||||||||||||||| | || |||||||||||||| | | |||| ||||||||||    
T  35863807 tggccgaggtttgaaccccagaccttgcatatattatgtattgtccttaccaactga 35863863  T

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Target: chr2 (Bit Score: 29; Significance: 0.0000008; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 29872170 - 29872226
Alignment:
Q  255 cgaggtttgaacctctgatcttgcatatattatatttcgtccataccaactgaacta 311  Q
    ||||||||||||||  || |||||||||||||| | | || ||||||||||||||||    
T  29872170 cgaggtttgaaccttagaccttgcatatattatgtattgttcataccaactgaacta 29872226  T

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Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 247 - 287
Target Start/End: Complemental strand, 30978433 - 30978393
Alignment:
Q  247 gtgatggccgaggtttgaacctctgatcttgcatatattat 287  Q
    |||||||| |||||||||||| |||| ||||||||||||||    
T  30978433 gtgatggcagaggtttgaacccctgaccttgcatatattat 30978393  T

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