View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2089-Insertion-5 (Length: 791)

Name: NF2089-Insertion-5
Description: NF2089
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2089-Insertion-5
NF2089-Insertion-5
[»] chr8 (1 HSPs)
chr8 (8-791)||(10561784-10562563)


Alignment Details
Target: chr8 (Bit Score: 720; Significance: 0; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 720; E-Value: 0
Query Start/End: Original strand, 8 - 791
Target Start/End: Original strand, 10561784 - 10562563
Alignment:
Q  8 catttgtgtgcgctcatcaagccaaccttctgaaatatgaaggattagccgatcaacattcttcccttcaaggtaaccattctcagaattctgcctaaga 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10561784 catttgtgtgcgctcatcaagccaaccttctgaaatatgaaggattagccgatcaacattctccccttcaaggtaaccattctcagaattctgcctaaga 10561883  T
Q  108 caatgaactttttgttcataattttttattcctttggcaaactcgtcgcacaaattctccaaaagtattcgtgcttttctctcttgttcaaggtttctca 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10561884 caatgaactttttgttcataattttttattcctttggcaaactcgtcgcacaaattctccaaaagtatttgtgcttttctctcttgttcaaggtttctca 10561983  T
Q  208 aacaactagagaatgaagattttacttcagaaagctcacaagcaagcctctgttgcaagctttcagagtgctttcgtagccttctctcatcttctagctc 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10561984 aacaactagagaatgaagattttacttcagaaagctcacaagcaagcctctgttgcaagctttcagagtgctttcgtagccttctctcatcttctagctc 10562083  T
Q  308 ttctttaagtgattgtacctcagtttgaattctatcatgttctttattcttcctaacaaatttttcaattgtcatttgcttcattaatttctccatttcc 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10562084 ttctttaagtgattgtacctcagtttgaattctatcatgttctttattcttcctaacaaatttttcaattgtcatttgcttcattaatttctccatttcc 10562183  T
Q  408 tgtctgttcatctctttctctcgtattaactccttcatctgtgtccgagagcgatttagttccgtttttaaggctttcactgctgatatatttgatgcat 507  Q
    ||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10562184 tgtctgttcatttgtttctctcgtattaactccttcatctgtgttcgagagcgatttagttccgtttttaaggctttcactgctgatatatttgatgcat 10562283  T
Q  508 gttgttcttctagactccatatccggttaagtacattaagtacttcctttgatgttgtaaggttgtaccttgactcttcagttatacctttgatatctat 607  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10562284 gttgttcttctagactccatatccggttaagtacattaagtacttcctttgatgttgcaaggttgtaccttgactcttcagttatacctttgatatctat 10562383  T
Q  608 ggagcttgtggaagttacttcacatttatatggtgcaacctgtttaaagtaaataacacatgcatcattttgtaacaagctccaaaggattacaaaacac 707  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10562384 ggagcttgtggaagttacttcacatttatatggtgcaacctgtttaaagcaaataacacatgcatcattttgtaac-agctccaaaggattacaaaacac 10562482  T
Q  708 gtttgaacataaaaaattgtctagaacgatcagtgaacaaaagaaaatccatgatgactaaggcttggtttgacaatgccagac 791  Q
    | |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  10562483 g-ttgaacat-aaaaattgtctagaacgatcagtgaacaaaag-aaatccatgatgactaaggctttgtttgacaatgccagac 10562563  T

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