View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20893_low_7 (Length: 237)

Name: NF20893_low_7
Description: NF20893
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20893_low_7
NF20893_low_7
[»] chr1 (91 HSPs)
chr1 (100-168)||(37593676-37593744)
chr1 (99-164)||(34290245-34290310)
chr1 (103-168)||(46252674-46252739)
chr1 (99-164)||(10199404-10199469)
chr1 (99-164)||(7136994-7137059)
chr1 (99-163)||(25479590-25479654)
chr1 (104-164)||(28689448-28689508)
chr1 (97-164)||(6292500-6292567)
chr1 (101-168)||(31517732-31517799)
chr1 (99-161)||(37842354-37842416)
chr1 (109-166)||(8016276-8016333)
chr1 (99-164)||(10854742-10854807)
chr1 (97-162)||(14629964-14630029)
chr1 (99-148)||(26779937-26779986)
chr1 (99-164)||(27140487-27140552)
chr1 (99-144)||(43332493-43332538)
chr1 (99-163)||(4576814-4576878)
chr1 (104-164)||(5886990-5887050)
chr1 (99-166)||(19389910-19389978)
chr1 (90-146)||(26461955-26462011)
chr1 (104-166)||(15784343-15784406)
chr1 (105-164)||(38170686-38170745)
chr1 (99-166)||(38867825-38867892)
chr1 (99-165)||(7218069-7218135)
chr1 (98-156)||(15361048-15361106)
chr1 (79-164)||(30815649-30815738)
chr1 (115-168)||(42397749-42397803)
chr1 (121-163)||(47877140-47877182)
chr1 (99-144)||(5047155-5047200)
chr1 (99-160)||(7262518-7262579)
chr1 (103-144)||(7472324-7472365)
chr1 (99-148)||(12564511-12564560)
chr1 (79-168)||(23373305-23373393)
chr1 (99-164)||(31118052-31118117)
chr1 (83-164)||(48748601-48748682)
chr1 (99-164)||(52190138-52190203)
chr1 (99-166)||(1509959-1510027)
chr1 (96-168)||(4699607-4699679)
chr1 (100-148)||(11893605-11893653)
chr1 (80-168)||(29834897-29834985)
chr1 (99-163)||(30257692-30257756)
chr1 (79-164)||(35707194-35707281)
chr1 (107-155)||(38503470-38503518)
chr1 (129-168)||(3223706-3223745)
chr1 (122-165)||(3224455-3224498)
chr1 (97-164)||(4445715-4445782)
chr1 (92-163)||(4920767-4920838)
chr1 (91-158)||(6279400-6279467)
chr1 (97-168)||(10280656-10280727)
chr1 (122-169)||(10809377-10809424)
chr1 (100-147)||(35590905-35590952)
chr1 (99-169)||(1565526-1565596)
chr1 (106-148)||(11129324-11129366)
chr1 (99-157)||(12564877-12564935)
chr1 (126-168)||(29635383-29635425)
chr1 (98-164)||(43338124-43338190)
chr1 (104-166)||(43722322-43722384)
chr1 (99-153)||(45975699-45975753)
chr1 (104-142)||(51190862-51190900)
chr1 (99-168)||(51695486-51695556)
chr1 (79-168)||(3070082-3070174)
chr1 (99-168)||(3924633-3924702)
chr1 (99-164)||(4202147-4202212)
chr1 (99-148)||(4548730-4548779)
chr1 (130-163)||(4549888-4549921)
chr1 (103-164)||(4622106-4622167)
chr1 (99-160)||(4700066-4700127)
chr1 (99-168)||(4868409-4868478)
chr1 (121-166)||(5276324-5276369)
chr1 (99-164)||(12477283-12477348)
chr1 (99-164)||(12593449-12593514)
chr1 (123-168)||(15579515-15579560)
chr1 (102-163)||(16981933-16981994)
chr1 (99-164)||(24460403-24460468)
chr1 (104-168)||(26185524-26185589)
chr1 (99-164)||(27963366-27963431)
chr1 (99-156)||(28077073-28077130)
chr1 (99-164)||(28909999-28910064)
chr1 (106-163)||(28935873-28935930)
chr1 (99-156)||(32182280-32182337)
chr1 (129-166)||(34278687-34278724)
chr1 (99-168)||(35080061-35080130)
chr1 (103-164)||(35925703-35925764)
chr1 (99-164)||(41195189-41195254)
chr1 (99-168)||(45205077-45205146)
chr1 (129-166)||(47917275-47917312)
chr1 (104-144)||(19092399-19092439)
chr1 (99-139)||(21254768-21254808)
chr1 (110-165)||(27145730-27145785)
chr1 (99-163)||(35017585-35017649)
chr1 (99-168)||(35350645-35350718)
[»] chr8 (52 HSPs)
chr8 (79-164)||(20672739-20672824)
chr8 (79-167)||(33553229-33553317)
chr8 (97-158)||(42215084-42215145)
chr8 (97-168)||(30191133-30191204)
chr8 (92-141)||(11494148-11494197)
chr8 (121-168)||(13000416-13000463)
chr8 (100-167)||(21653091-21653158)
chr8 (122-168)||(2594989-2595035)
chr8 (99-145)||(4762518-4762564)
chr8 (97-158)||(11493972-11494033)
chr8 (99-164)||(11569453-11569518)
chr8 (98-166)||(25869260-25869328)
chr8 (104-168)||(39866726-39866790)
chr8 (79-166)||(14949855-14949942)
chr8 (99-142)||(27028840-27028883)
chr8 (122-161)||(30389131-30389170)
chr8 (97-160)||(33714236-33714299)
chr8 (99-166)||(38421273-38421340)
chr8 (79-134)||(40280253-40280308)
chr8 (121-164)||(41606899-41606942)
chr8 (97-164)||(42215302-42215369)
chr8 (117-163)||(3600735-3600781)
chr8 (117-163)||(14339602-14339648)
chr8 (99-168)||(779053-779122)
chr8 (123-168)||(4281579-4281624)
chr8 (99-168)||(30918122-30918190)
chr8 (124-168)||(32840977-32841022)
chr8 (99-168)||(41620283-41620352)
chr8 (99-148)||(44236835-44236884)
chr8 (99-163)||(2235653-2235717)
chr8 (99-155)||(9956819-9956875)
chr8 (100-168)||(12224891-12224959)
chr8 (99-163)||(27754413-27754477)
chr8 (97-164)||(9540992-9541059)
chr8 (97-160)||(10075551-10075614)
chr8 (93-164)||(12851179-12851250)
chr8 (99-162)||(28769337-28769400)
chr8 (97-163)||(28784793-28784858)
chr8 (99-161)||(29059795-29059857)
chr8 (99-163)||(1930044-1930109)
chr8 (121-166)||(3161617-3161662)
chr8 (99-164)||(5069706-5069771)
chr8 (99-168)||(7918438-7918507)
chr8 (99-144)||(7918789-7918834)
chr8 (99-164)||(37353245-37353310)
chr8 (99-168)||(39551201-39551270)
chr8 (99-168)||(43504760-43504829)
chr8 (115-163)||(11000573-11000621)
chr8 (100-164)||(11795102-11795166)
chr8 (96-164)||(31168020-31168088)
chr8 (99-167)||(31862502-31862570)
chr8 (102-162)||(42370359-42370419)
[»] chr7 (49 HSPs)
chr7 (79-168)||(7244669-7244758)
chr7 (81-164)||(22551401-22551484)
chr7 (99-168)||(12110369-12110438)
chr7 (90-163)||(48917341-48917416)
chr7 (97-144)||(12792579-12792626)
chr7 (99-176)||(529384-529461)
chr7 (80-166)||(34035907-34035994)
chr7 (99-168)||(46825107-46825178)
chr7 (99-148)||(25596042-25596091)
chr7 (92-164)||(6552288-6552360)
chr7 (79-164)||(43250695-43250782)
chr7 (99-163)||(44151477-44151541)
chr7 (104-166)||(21247939-21248002)
chr7 (121-168)||(46082067-46082114)
chr7 (121-168)||(47134749-47134796)
chr7 (99-165)||(4966165-4966231)
chr7 (122-168)||(11048059-11048105)
chr7 (110-168)||(25670578-25670636)
chr7 (99-168)||(9423586-9423655)
chr7 (97-142)||(12792642-12792687)
chr7 (99-160)||(24363601-24363662)
chr7 (103-163)||(29286804-29286864)
chr7 (96-168)||(30316968-30317040)
chr7 (97-144)||(12792514-12792561)
chr7 (129-168)||(20888386-20888425)
chr7 (105-164)||(35267377-35267436)
chr7 (115-166)||(44808183-44808234)
chr7 (79-142)||(5017958-5018023)
chr7 (126-168)||(36537944-36537986)
chr7 (79-158)||(42656482-42656563)
chr7 (122-164)||(43219640-43219682)
chr7 (99-164)||(9038121-9038185)
chr7 (123-168)||(15740403-15740448)
chr7 (99-144)||(18962588-18962633)
chr7 (99-144)||(18965726-18965771)
chr7 (99-148)||(27378840-27378889)
chr7 (99-168)||(33645953-33646021)
chr7 (99-168)||(45859519-45859587)
chr7 (99-144)||(46104583-46104628)
chr7 (99-160)||(47559601-47559662)
chr7 (79-140)||(3836702-3836765)
chr7 (124-168)||(6226148-6226192)
chr7 (97-157)||(7623145-7623205)
chr7 (124-168)||(9872906-9872950)
chr7 (80-148)||(33601127-33601195)
chr7 (104-163)||(33871265-33871322)
chr7 (126-158)||(35007633-35007665)
chr7 (99-163)||(39345480-39345544)
chr7 (128-168)||(39539773-39539813)
[»] chr6 (49 HSPs)
chr6 (99-164)||(33887839-33887904)
chr6 (96-168)||(4420649-4420721)
chr6 (99-164)||(6647396-6647461)
chr6 (115-166)||(6536972-6537023)
chr6 (116-166)||(9027604-9027654)
chr6 (106-164)||(13908479-13908537)
chr6 (79-161)||(31583668-31583750)
chr6 (99-168)||(2112209-2112278)
chr6 (79-140)||(2205610-2205671)
chr6 (99-168)||(3528812-3528881)
chr6 (99-168)||(30863255-30863324)
chr6 (92-143)||(26694880-26694931)
chr6 (99-144)||(835265-835310)
chr6 (99-164)||(5564124-5564189)
chr6 (99-168)||(7931718-7931787)
chr6 (99-168)||(10616533-10616602)
chr6 (99-168)||(20368172-20368241)
chr6 (99-144)||(27894055-27894100)
chr6 (99-164)||(31624099-31624164)
chr6 (99-164)||(32386559-32386624)
chr6 (99-168)||(34403864-34403933)
chr6 (103-168)||(34939526-34939591)
chr6 (96-168)||(2455816-2455888)
chr6 (98-158)||(17241254-17241314)
chr6 (99-163)||(19275633-19275697)
chr6 (99-147)||(20370892-20370940)
chr6 (100-148)||(20512656-20512704)
chr6 (96-168)||(29837077-29837148)
chr6 (124-168)||(33832265-33832309)
chr6 (124-163)||(821833-821872)
chr6 (99-166)||(8364970-8365037)
chr6 (121-168)||(31420976-31421023)
chr6 (101-164)||(34939755-34939818)
chr6 (101-167)||(281841-281907)
chr6 (122-164)||(696634-696676)
chr6 (82-167)||(10031723-10031809)
chr6 (121-163)||(29296292-29296334)
chr6 (99-137)||(31812036-31812074)
chr6 (129-166)||(733171-733208)
chr6 (99-144)||(1497990-1498035)
chr6 (123-168)||(1575928-1575973)
chr6 (99-144)||(13907856-13907901)
chr6 (121-162)||(27909636-27909677)
chr6 (97-142)||(32387073-32387118)
chr6 (99-164)||(33089515-33089580)
chr6 (108-164)||(7785740-7785796)
chr6 (96-164)||(11600870-11600938)
chr6 (99-155)||(13907594-13907650)
chr6 (104-168)||(32577978-32578042)
[»] chr3 (76 HSPs)
chr3 (109-164)||(36139897-36139952)
chr3 (109-164)||(36101587-36101642)
chr3 (99-166)||(36887513-36887580)
chr3 (99-164)||(21367676-21367742)
chr3 (79-144)||(16790394-16790459)
chr3 (99-168)||(37273143-37273212)
chr3 (104-164)||(23808060-23808120)
chr3 (96-164)||(54837030-54837098)
chr3 (99-162)||(20669181-20669244)
chr3 (103-162)||(33883748-33883807)
chr3 (105-168)||(42745053-42745116)
chr3 (97-164)||(52440658-52440725)
chr3 (99-169)||(39602201-39602271)
chr3 (99-161)||(40665438-40665500)
chr3 (99-164)||(24785214-24785279)
chr3 (99-168)||(30573906-30573975)
chr3 (97-146)||(34924552-34924601)
chr3 (99-168)||(52619012-52619081)
chr3 (104-168)||(36200110-36200174)
chr3 (96-164)||(45541577-45541645)
chr3 (121-168)||(3044251-3044298)
chr3 (92-163)||(45432936-45433007)
chr3 (99-158)||(53736122-53736181)
chr3 (96-142)||(2825153-2825199)
chr3 (99-145)||(20502083-20502129)
chr3 (98-163)||(36878753-36878819)
chr3 (99-148)||(2719477-2719526)
chr3 (99-164)||(8933796-8933861)
chr3 (121-166)||(25925773-25925818)
chr3 (99-163)||(35394494-35394559)
chr3 (79-164)||(37825111-37825196)
chr3 (108-165)||(47249481-47249538)
chr3 (107-168)||(47513670-47513731)
chr3 (99-168)||(50600170-50600239)
chr3 (80-148)||(12985357-12985425)
chr3 (100-148)||(13371127-13371175)
chr3 (99-155)||(26320107-26320163)
chr3 (88-148)||(26478943-26479003)
chr3 (104-168)||(29771852-29771916)
chr3 (99-162)||(33965486-33965550)
chr3 (128-168)||(41724250-41724290)
chr3 (99-166)||(1816592-1816659)
chr3 (80-139)||(13413920-13413979)
chr3 (97-156)||(25453863-25453922)
chr3 (97-148)||(34414796-34414847)
chr3 (121-164)||(36445856-36445899)
chr3 (121-168)||(43115087-43115134)
chr3 (99-162)||(51130759-51130822)
chr3 (122-164)||(5391911-5391953)
chr3 (122-164)||(5396229-5396271)
chr3 (122-164)||(39723236-39723278)
chr3 (99-145)||(41633369-41633415)
chr3 (27-73)||(49465780-49465826)
chr3 (99-164)||(1217796-1217861)
chr3 (96-137)||(14145918-14145959)
chr3 (99-148)||(20170720-20170769)
chr3 (99-168)||(21574499-21574568)
chr3 (99-148)||(34382951-34383000)
chr3 (100-164)||(34610801-34610866)
chr3 (121-162)||(34954113-34954154)
chr3 (100-161)||(41671320-41671381)
chr3 (79-148)||(46407906-46407975)
chr3 (99-164)||(54180776-54180841)
chr3 (100-168)||(482784-482852)
chr3 (99-143)||(2071065-2071109)
chr3 (99-163)||(2128255-2128319)
chr3 (110-162)||(5166343-5166395)
chr3 (118-162)||(11040612-11040656)
chr3 (115-163)||(20195030-20195077)
chr3 (102-158)||(21862177-21862233)
chr3 (100-148)||(23793594-23793642)
chr3 (99-155)||(25447250-25447305)
chr3 (99-166)||(33405160-33405228)
chr3 (96-144)||(37138296-37138344)
chr3 (99-167)||(48048975-48049043)
chr3 (104-164)||(50952347-50952407)
[»] chr4 (55 HSPs)
chr4 (92-162)||(28300297-28300367)
chr4 (99-164)||(23819098-23819163)
chr4 (99-143)||(47800632-47800676)
chr4 (99-168)||(2996582-2996651)
chr4 (99-168)||(4471177-4471246)
chr4 (99-156)||(17884077-17884134)
chr4 (79-164)||(21043231-21043316)
chr4 (99-164)||(29263379-29263444)
chr4 (99-156)||(47145971-47146028)
chr4 (99-164)||(52746836-52746901)
chr4 (99-148)||(53673670-53673719)
chr4 (80-143)||(4500836-4500899)
chr4 (99-166)||(46019623-46019690)
chr4 (97-144)||(51630118-51630165)
chr4 (99-161)||(7694009-7694071)
chr4 (119-161)||(24747348-24747390)
chr4 (99-160)||(4798566-4798627)
chr4 (90-143)||(18011871-18011924)
chr4 (99-148)||(18628555-18628604)
chr4 (79-164)||(35743271-35743356)
chr4 (99-168)||(40532586-40532655)
chr4 (79-148)||(5131262-5131335)
chr4 (100-164)||(44249295-44249359)
chr4 (121-164)||(1137743-1137786)
chr4 (124-163)||(8469374-8469413)
chr4 (81-148)||(25548140-25548207)
chr4 (99-164)||(42641635-42641702)
chr4 (121-164)||(43824314-43824357)
chr4 (129-168)||(46401303-46401342)
chr4 (99-158)||(55084483-55084542)
chr4 (99-165)||(825485-825551)
chr4 (99-137)||(2111073-2111111)
chr4 (122-168)||(4691880-4691926)
chr4 (99-137)||(29778804-29778842)
chr4 (99-141)||(30631248-30631290)
chr4 (92-168)||(53155265-53155338)
chr4 (99-144)||(3155612-3155657)
chr4 (103-144)||(14011247-14011288)
chr4 (105-142)||(30377433-30377470)
chr4 (99-144)||(35290203-35290248)
chr4 (121-162)||(42461282-42461323)
chr4 (92-161)||(43932437-43932506)
chr4 (129-166)||(46201387-46201424)
chr4 (99-168)||(46415784-46415853)
chr4 (101-146)||(47118979-47119024)
chr4 (99-148)||(49219148-49219197)
chr4 (99-164)||(52735131-52735195)
chr4 (100-168)||(488118-488186)
chr4 (104-148)||(2592321-2592365)
chr4 (100-168)||(2874616-2874684)
chr4 (104-144)||(17751160-17751200)
chr4 (99-167)||(19250555-19250623)
chr4 (123-163)||(48719388-48719428)
chr4 (121-168)||(50569321-50569369)
chr4 (104-148)||(53792585-53792629)
[»] chr2 (70 HSPs)
chr2 (99-161)||(35379015-35379077)
chr2 (97-163)||(44443328-44443394)
chr2 (99-168)||(14666557-14666626)
chr2 (99-168)||(34652028-34652097)
chr2 (103-168)||(43199776-43199841)
chr2 (97-164)||(680510-680577)
chr2 (93-164)||(12313169-12313240)
chr2 (99-166)||(43910993-43911060)
chr2 (99-142)||(43985021-43985064)
chr2 (99-168)||(9174824-9174894)
chr2 (92-142)||(9595260-9595310)
chr2 (99-168)||(1056121-1056190)
chr2 (80-145)||(3227698-3227763)
chr2 (99-164)||(29316771-29316836)
chr2 (99-163)||(16867748-16867812)
chr2 (93-168)||(15120186-15120261)
chr2 (121-168)||(41809237-41809284)
chr2 (97-164)||(41817175-41817242)
chr2 (99-168)||(26143631-26143701)
chr2 (99-169)||(33942159-33942229)
chr2 (99-157)||(38078413-38078471)
chr2 (122-168)||(44606102-44606148)
chr2 (99-168)||(1939324-1939393)
chr2 (90-143)||(3067396-3067449)
chr2 (99-164)||(7871652-7871717)
chr2 (99-164)||(8017443-8017508)
chr2 (97-162)||(9530726-9530791)
chr2 (99-168)||(32821818-32821887)
chr2 (99-168)||(33941918-33941987)
chr2 (99-168)||(43065442-43065511)
chr2 (99-168)||(43141880-43141949)
chr2 (100-148)||(656789-656837)
chr2 (106-166)||(1893275-1893335)
chr2 (121-177)||(12147488-12147544)
chr2 (97-153)||(12464480-12464536)
chr2 (99-167)||(35485926-35485994)
chr2 (99-142)||(1810673-1810716)
chr2 (108-155)||(7928304-7928351)
chr2 (121-160)||(8820292-8820331)
chr2 (99-162)||(10563556-10563619)
chr2 (105-148)||(12464679-12464722)
chr2 (129-168)||(30538165-30538204)
chr2 (92-135)||(36863650-36863693)
chr2 (97-164)||(42420004-42420071)
chr2 (99-164)||(1625909-1625975)
chr2 (82-168)||(7282988-7283074)
chr2 (121-163)||(11063519-11063561)
chr2 (99-145)||(15977994-15978040)
chr2 (99-164)||(26626882-26626948)
chr2 (99-161)||(35378531-35378593)
chr2 (89-163)||(35993377-35993451)
chr2 (99-164)||(40682390-40682455)
chr2 (82-164)||(41144202-41144284)
chr2 (99-145)||(44590043-44590089)
chr2 (97-142)||(1056371-1056416)
chr2 (99-168)||(8187445-8187514)
chr2 (100-168)||(11488287-11488353)
chr2 (97-169)||(16398121-16398194)
chr2 (99-160)||(19333325-19333386)
chr2 (92-168)||(30552635-30552712)
chr2 (123-168)||(32614940-32614985)
chr2 (99-164)||(33256749-33256814)
chr2 (99-168)||(36415666-36415734)
chr2 (99-164)||(40158727-40158792)
chr2 (99-168)||(42817368-42817437)
chr2 (99-140)||(44644287-44644328)
chr2 (123-168)||(45314901-45314946)
chr2 (96-164)||(6772516-6772584)
chr2 (99-143)||(24097817-24097861)
chr2 (102-166)||(43635095-43635159)
[»] chr5 (55 HSPs)
chr5 (99-164)||(17258879-17258944)
chr5 (99-163)||(11707064-11707128)
chr5 (79-166)||(12242704-12242791)
chr5 (93-168)||(37611207-37611282)
chr5 (93-168)||(37787937-37788012)
chr5 (91-168)||(10125710-10125787)
chr5 (99-164)||(13604845-13604910)
chr5 (99-164)||(36639531-36639596)
chr5 (101-168)||(12459993-12460060)
chr5 (99-168)||(7674657-7674726)
chr5 (99-168)||(10272423-10272492)
chr5 (99-168)||(17368685-17368754)
chr5 (99-155)||(4014429-4014485)
chr5 (104-164)||(12521542-12521602)
chr5 (92-164)||(32408588-32408660)
chr5 (99-163)||(33533536-33533600)
chr5 (121-168)||(12467164-12467211)
chr5 (99-166)||(25461310-25461377)
chr5 (79-166)||(985600-985689)
chr5 (99-164)||(9202743-9202809)
chr5 (123-164)||(499727-499768)
chr5 (99-168)||(2092537-2092606)
chr5 (99-164)||(2568667-2568732)
chr5 (99-148)||(7319020-7319069)
chr5 (111-168)||(8089957-8090014)
chr5 (99-164)||(18543193-18543257)
chr5 (99-148)||(18906351-18906400)
chr5 (99-164)||(21768193-21768258)
chr5 (99-164)||(26209409-26209474)
chr5 (99-164)||(41957447-41957512)
chr5 (99-163)||(5284445-5284509)
chr5 (99-155)||(7984978-7985034)
chr5 (100-148)||(38104869-38104917)
chr5 (101-149)||(38829647-38829695)
chr5 (99-153)||(3237102-3237156)
chr5 (99-153)||(7907890-7907944)
chr5 (102-164)||(32545046-32545108)
chr5 (99-164)||(39105473-39105539)
chr5 (123-164)||(1899187-1899228)
chr5 (123-168)||(11700370-11700415)
chr5 (99-148)||(12425580-12425629)
chr5 (99-168)||(32172662-32172731)
chr5 (105-166)||(32194073-32194134)
chr5 (99-168)||(32897466-32897535)
chr5 (121-162)||(35963272-35963313)
chr5 (79-164)||(36774703-36774788)
chr5 (99-148)||(39594816-39594865)
chr5 (104-148)||(1465032-1465076)
chr5 (108-164)||(8177528-8177584)
chr5 (121-161)||(10303827-10303867)
chr5 (92-164)||(13264101-13264172)
chr5 (97-141)||(18637039-18637083)
chr5 (97-141)||(19460405-19460449)
chr5 (100-148)||(20028502-20028550)
chr5 (79-144)||(29116966-29117033)
[»] scaffold0147 (2 HSPs)
scaffold0147 (104-168)||(4927-4991)
scaffold0147 (106-168)||(12696-12758)
[»] scaffold0089 (1 HSPs)
scaffold0089 (100-148)||(33639-33687)
[»] scaffold0311 (1 HSPs)
scaffold0311 (113-168)||(10609-10664)
[»] scaffold0011 (1 HSPs)
scaffold0011 (94-146)||(14614-14666)


Alignment Details
Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 91)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 100 - 168
Target Start/End: Complemental strand, 37593744 - 37593676
Alignment:
Q  100 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  37593744 tttcataagctattttgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagttgt 37593676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 34290245 - 34290310
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||| |||| ||||||||||    
T  34290245 ttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaatatgtcataag 34290310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 46252739 - 46252674
Alignment:
Q  103 cataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||||| || |||||||||||||| ||||||||||||| |||||||||||||||||||    
T  46252739 cataagctatcttggagagcttatgaaaataacctgaaaacaacttatgaacatgtcataagttgt 46252674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 10199469 - 10199404
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||||||||||| ||  || |||||||||||||||||||||||||||| |||||||||||||||    
T  10199469 ttttcataagctattttagagagcttatgaaaataagctgaaaacaacttatgaacatgtcataag 10199404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 7137059 - 7136994
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||||||||||||||| ||  ||||||||||||||||||||| ||||| |||| ||||||||||    
T  7137059 ttttcataagctatcttggagaacttatgaaaataagctgaaaataacttatgaatatgtcataag 7136994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 25479590 - 25479654
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    ||||||||||||||| |  || |||||||||||||||||||||||||||  ||||||||||||||    
T  25479590 ttttcataagctatcctagagagcttatgaaaataagctgaaaacaactaatgaacatgtcataa 25479654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 28689508 - 28689448
Alignment:
Q  104 ataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||| |  |||||||||||||||||||||||||||| || ||||||||||||    
T  28689508 ataagctatcttggaaagcttatgaaaataagctgaaaacaacttatggacatgtcataag 28689448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 164
Target Start/End: Original strand, 6292500 - 6292567
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||| ||| |||| ||| || |||||||||||||||||||||||| ||| |||||||||||||||    
T  6292500 tattttcgtaaactattttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataag 6292567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 31517799 - 31517732
Alignment:
Q  101 ttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||| || ||||| || |||||||||||||||||||||||| ||| |||||||||||| ||||||    
T  31517799 ttcataatctgtcttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcatgagttgt 31517732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 37842416 - 37842354
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcat 161  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||  ||| ||||||||||||    
T  37842416 ttttcataagctatcttgaagaacttataaaaataagctgaaaactgcttatgaacatgtcat 37842354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 8016276 - 8016333
Alignment:
Q  109 ctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 166  Q
    |||||||| || ||||| ||||||||||||||||||| || |||||||||||||||||    
T  8016276 ctatcttggagagcttaggaaaataagctgaaaacaagttatgaacatgtcataagtt 8016333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 10854742 - 10854807
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||  ||||| ||||  ||||| |||||||||||||||||| |||||||||||||||||||    
T  10854742 ttttcatatactatcctgaacagcttaagaaaataagctgaaaacagcttgtgaacatgtcataag 10854807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 162
Target Start/End: Complemental strand, 14630029 - 14629964
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcata 162  Q
    |||||||||||||||||||| ||   ||||| |||||||||||||||||||| ||||||| |||||    
T  14630029 tattttcataagctatcttggagactttatggaaataagctgaaaacaacttatgaacatatcata 14629964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 26779986 - 26779937
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  26779986 ttttcataagctatcttgaagaacttatgaaaataagttgaaaacaactt 26779937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 27140487 - 27140552
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||| |||||||||| || || ||||||| |||||||||||||||||||| || ||||||||||||    
T  27140487 tttttataagctatcatggagagcttatgcaaataagctgaaaacaacttatggacatgtcataag 27140552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 43332493 - 43332538
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 144  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||    
T  43332493 ttttcataagctatcttgaagagcttattaaaataagctgaaaaca 43332538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 4576814 - 4576878
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    |||||||||||||| |||||   ||||||||||||||||||| ||||||| | ||||||||||||    
T  4576814 ttttcataagctatattgaataacttatgaaaataagctgaacacaacttataaacatgtcataa 4576878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 5887050 - 5886990
Alignment:
Q  104 ataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||| |||||| ||  |||| |||||||||||||||||||||| |||||||||||||||    
T  5887050 ataagccatcttggagaacttacgaaaataagctgaaaacaacttatgaacatgtcataag 5886990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 19389910 - 19389978
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagct-gaaaacaacttgtgaacatgtcataagtt 166  Q
    |||||||||||||||||| || |||| ||||||||||||  |||||||||| ||||||| |||||||||    
T  19389910 ttttcataagctatcttggagagcttgtgaaaataagctaaaaaacaacttatgaacatatcataagtt 19389978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 146
Target Start/End: Complemental strand, 26462011 - 26461955
Alignment:
Q  90 gttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaac 146  Q
    ||||||| || ||||||||||||| || || ||||||||||||||||||||||||||    
T  26462011 gttaaatcatcttcataagctatcctgcagagcttatgaaaataagctgaaaacaac 26461955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 15784343 - 15784406
Alignment:
Q  104 ataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataagtt 166  Q
    ||||||||||||| ||  ||| |||||||||||| |||||||||||||||| ||||||||||||    
T  15784343 ataagctatcttggagaacttgtgaaaataagctaaaaacaacttgtgaacaatgtcataagtt 15784406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 164
Target Start/End: Complemental strand, 38170745 - 38170686
Alignment:
Q  105 taagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||||  |||||| ||||| ||||| |||||||||||||||| |||||||||||||||    
T  38170745 taagctaatttgaagagcttaggaaaacaagctgaaaacaacttatgaacatgtcataag 38170686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 38867892 - 38867825
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 166  Q
    |||||||||| ||||||||||  |||||||||||||||| |||||||||  || |||| |||||||||    
T  38867892 ttttcataagttatcttgaagaacttatgaaaataagctaaaaacaactgatggacatatcataagtt 38867825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 165
Target Start/End: Complemental strand, 7218135 - 7218069
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagt 165  Q
    ||||||||| ||||| || ||  |||||||||||||| |||||||| ||||||||| ||||||||||    
T  7218135 ttttcataacctatcctggagaacttatgaaaataagttgaaaacagcttgtgaacgtgtcataagt 7218069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 15361048 - 15361106
Alignment:
Q  98 attttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacat 156  Q
    ||||||||  |||||| || || |||||||||||||||||||||||||||| |||||||    
T  15361048 attttcattggctatcctggagagcttatgaaaataagctgaaaacaacttatgaacat 15361106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 30815738 - 30815649
Alignment:
Q  79 gataaaataaagttaaattattttcata-----agctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||||||| ||||||||||     |||| | ||||||  |||||||||||||||||||||||  || |||||||||||||||    
T  30815738 gataaaataaagttaaactattttcatataagtagct-tgttgaagaacttatgaaaataagctgaaaacattttatgaacatgtcataag 30815649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 42397749 - 42397803
Alignment:
Q  115 tgaagtgcttatgaaaat-aagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||||| |||| |||||||||||||||| |||||||| ||||||||||    
T  42397749 tgaagtgcttatggaaattaagctgaaaacaacttatgaacatgccataagttgt 42397803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 47877140 - 47877182
Alignment:
Q  121 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    |||||||||||||||||||||||||||| ||| ||||||||||    
T  47877140 gcttatgaaaataagctgaaaacaacttatgagcatgtcataa 47877182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 5047155 - 5047200
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 144  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  5047155 ttttcataagctatcatgaagagcttatggaaataagctgaaaaca 5047200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 160
Target Start/End: Complemental strand, 7262579 - 7262518
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtca 160  Q
    ||||||||||||||| ||||| |||| || ||||||| |||||||| ||| |||||||||||    
T  7262579 ttttcataagctatcctgaagagcttgtggaaataaggtgaaaacagcttatgaacatgtca 7262518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 144
Target Start/End: Original strand, 7472324 - 7472365
Alignment:
Q  103 cataagctatcttgaagtgcttatgaaaataagctgaaaaca 144  Q
    |||||||||||||| || ||||||||||||||||||||||||    
T  7472324 cataagctatcttggagagcttatgaaaataagctgaaaaca 7472365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 12564560 - 12564511
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    |||||||||||||||||| ||  |||||| ||||||||||||||||||||    
T  12564560 ttttcataagctatcttggagaacttatggaaataagctgaaaacaactt 12564511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 23373393 - 23373305
Alignment:
Q  79 gataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||||| ||  | ||||||||||||||| ||||| |||||   ||||||||||||||| |  |||| ||||||||||||||||    
T  23373393 gataaaataaagtcaatctgttttcataagctatcctgaagagcttacagaaataagctgaaaac-agatgtggacatgtcataagttgt 23373305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 31118052 - 31118117
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||| | ||| |  |||||| |||||||||||||||||||  |||||||||||||||    
T  31118052 ttttcataagctaccctgatgaacttatggaaataagctgaaaacaactgatgaacatgtcataag 31118117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 164
Target Start/End: Complemental strand, 48748682 - 48748601
Alignment:
Q  83 aaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||||| |||||||||||||||||| |  | |||||  |||||||| || | ||||| || ||||||||||||    
T  48748682 aaataaagttaaattgttttcataagctatcttggacagtttatggtaataagctaaacataacttatggacatgtcataag 48748601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 52190138 - 52190203
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||||| || || ||||| |||||||||||||||||  |||||| || |||||||||    
T  52190138 ttttcataagctatcatggagagcttacgaaaataagctgaaaacggcttgtggacttgtcataag 52190203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 1510027 - 1509959
Alignment:
Q  99 ttttcataagctatctt-gaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 166  Q
    ||||||||| ||||||| | |||  |||||||||||||||||||||| ||  |||||||||||||||||    
T  1510027 ttttcataacctatcttaggagtatttatgaaaataagctgaaaacagctaatgaacatgtcataagtt 1509959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 4699679 - 4699607
Alignment:
Q  96 ttattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||| |||||  | || ||||||  ||||||||| |||||| ||| |||||||||||||||||||    
T  4699679 ttattttcataaactatcccggagagcttatagaaataagctaaaaacagcttatgaacatgtcataagttgt 4699607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 11893653 - 11893605
Alignment:
Q  100 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    ||||||||||||| |||||| | ||||| ||||||||||||||||||||    
T  11893653 tttcataagctattttgaagagtttatggaaataagctgaaaacaactt 11893605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 168
Target Start/End: Complemental strand, 29834985 - 29834897
Alignment:
Q  80 ataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||| ||||| ||||||||||||||| || || ||||||| ||||||  |||||| | ||| || ||| ||| ||||||||    
T  29834985 ataaaataaagtcaaattgttttcataagctatcatgtagagcttatggaaataaattgaaaaaagcttatggacacgtcgtaagttgt 29834897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 30257692 - 30257756
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    ||||||||| ||||| || || ||||||  |||||||||||||||| ||| ||||||||||||||    
T  30257692 ttttcataaactatcctggagggcttatagaaataagctgaaaacagcttatgaacatgtcataa 30257756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 35707281 - 35707194
Alignment:
Q  79 gataaaataaagttaaattattttcat--aagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||||| |||| ||| | |||||||  ||| |||| || || ||||||||||||| |||||||||||||||||  |||||||||||    
T  35707281 gataaaattaagtcaaactgttttcatgtaagttatcctgtagagcttatgaaaatatgctgaaaacaacttgtgggcatgtcataag 35707194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 38503518 - 38503470
Alignment:
Q  107 agctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaaca 155  Q
    |||||||||| ||  ||||||||||||||||||||||||||| ||||||    
T  38503518 agctatcttggagaacttatgaaaataagctgaaaacaacttatgaaca 38503470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 168
Target Start/End: Original strand, 3223706 - 3223745
Alignment:
Q  129 aaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||||||||||| | |||||||||||||||||    
T  3223706 aaataagctgaaaacaacttataaacatgtcataagttgt 3223745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 165
Target Start/End: Original strand, 3224455 - 3224498
Alignment:
Q  122 cttatgaaaataagctgaaaacaacttgtgaacatgtcataagt 165  Q
    |||||||||||||||||| |||||||| || |||||||||||||    
T  3224455 cttatgaaaataagctgagaacaacttatggacatgtcataagt 3224498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 164
Target Start/End: Original strand, 4445715 - 4445782
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||||  |||| || |||| |||||||||| |||||||| ||| ||||||||| |||||    
T  4445715 tattttcataagctgacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataag 4445782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 4920838 - 4920767
Alignment:
Q  92 taaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    |||| ||||| ||||| |||||||||   ||||||||||||||||| |||||||| |  |||||||||||||    
T  4920838 taaactatttccataacctatcttgagtagcttatgaaaataagctaaaaacaacctaagaacatgtcataa 4920767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 6279400 - 6279467
Alignment:
Q  91 ttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgt 158  Q
    ||||| ||||||||||||||||| |  || ||||||| ||||| |||||||||||||| || ||||||    
T  6279400 ttaaactattttcataagctatcctagagagcttatggaaatacgctgaaaacaacttatggacatgt 6279467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 168
Target Start/End: Original strand, 10280656 - 10280727
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||| ||||||||||| |||  |||||||||||||||||| || | ||| ||||||||  |||||||||    
T  10280656 tattttcgtaagctatcttcaagaacttatgaaaataagctgacaaaagcttatgaacatgaaataagttgt 10280727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 10809377 - 10809424
Alignment:
Q  122 cttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgtc 169  Q
    |||||||||||||||||||||||  || | ||||||||||||||||||    
T  10809377 cttatgaaaataagctgaaaacatattataaacatgtcataagttgtc 10809424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 35590952 - 35590905
Alignment:
Q  100 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaact 147  Q
    |||||||||||||| || || ||||||| |||||||||||||||||||    
T  35590952 tttcataagctatcatggagagcttatggaaataagctgaaaacaact 35590905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 1565596 - 1565526
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgtc 169  Q
    ||||| ||| |||| ||| || ||| |||||||||||||||||||| ||| || |||||||||||| ||||    
T  1565596 ttttcttaatctattttggagagctcatgaaaataagctgaaaacagcttatgcacatgtcataagctgtc 1565526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 11129324 - 11129366
Alignment:
Q  106 aagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    |||||||| |||| ||||||||||||||| |||||||||||||    
T  11129324 aagctatcctgaaatgcttatgaaaataaactgaaaacaactt 11129366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 12564935 - 12564877
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatg 157  Q
    |||||||||||||||||  |||||||| | |||||||||||||||| ||| || |||||    
T  12564935 ttttcataagctatcttttagtgcttacggaaataagctgaaaacagcttatggacatg 12564877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 29635383 - 29635425
Alignment:
Q  126 tgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||||||||||||||| | |||||||||||| ||||    
T  29635383 tgaaaataagctgaaaacaacttataaacatgtcataacttgt 29635425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 164
Target Start/End: Original strand, 43338124 - 43338190
Alignment:
Q  98 attttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||||||||||| | || || ||||||||||||| |||||||| |  || |||||||||||||||    
T  43338124 attttcataagctaacatggagagcttatgaaaataggctgaaaatagattatgaacatgtcataag 43338190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 43722384 - 43722322
Alignment:
Q  104 ataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 166  Q
    ||||||||| ||  || |||||| ||||||||||||||||||| |  ||||||||||||||||    
T  43722384 ataagctatatttgagagcttataaaaataagctgaaaacaacataagaacatgtcataagtt 43722322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 153
Target Start/End: Original strand, 45975699 - 45975753
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaa 153  Q
    |||||||||||||||||| ||   |||||||||||||||||||||| ||| ||||    
T  45975699 ttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaa 45975753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 142
Target Start/End: Original strand, 51190862 - 51190900
Alignment:
Q  104 ataagctatcttgaagtgcttatgaaaataagctgaaaa 142  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  51190862 ataagctatcttgaagaacttatgaaaataagctgaaaa 51190900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 51695556 - 51695486
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataagttgt 168  Q
    |||||||||||||||||| ||   |||||||||||||||||||| | ||| ||||| |||| |||||||||    
T  51695556 ttttcataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaacaatgtgataagttgt 51695486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 3070174 - 3070082
Alignment:
Q  79 gataaaataaagttaa--attattttcataagctatcttgaagtgcttatga-aaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||||||||   || |||||||||||||| | | ||  ||||| | || ||||||||||||| ||| |||||||||||||||||||    
T  3070174 gataaaataaagttaattgttgttttcataagctatttgggagaacttataataattaagctgaaaacagcttatgaacatgtcataagttgt 3070082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 3924633 - 3924702
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||| |||||||||| ||||| | ||||| |||||||| ||||||||||| | ||||| |||||| ||||    
T  3924633 tttttataagctatcctgaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgt 3924702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 4202212 - 4202147
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||| ||||||||| | || ||||| |||||||||||||||| | ||| || ||||||||||||    
T  4202212 ttttcaaaagctatctggcagagcttacgaaaataagctgaaaatagcttatggacatgtcataag 4202147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 4548730 - 4548779
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    |||||||||||||||||| || ||||  ||||||||||| ||||||||||    
T  4548730 ttttcataagctatcttggagagcttcagaaaataagctaaaaacaactt 4548779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 163
Target Start/End: Original strand, 4549888 - 4549921
Alignment:
Q  130 aataagctgaaaacaacttgtgaacatgtcataa 163  Q
    ||||||||||||||||||| ||||||||||||||    
T  4549888 aataagctgaaaacaacttatgaacatgtcataa 4549921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 4622106 - 4622167
Alignment:
Q  103 cataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||| ||||||||| || |||| |||||||||||| |||||| ||| || ||||||||||||    
T  4622106 catatgctatcttggagagcttgtgaaaataagctaaaaacagcttatggacatgtcataag 4622167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 160
Target Start/End: Complemental strand, 4700127 - 4700066
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtca 160  Q
    |||| |||| ||||| || || |||||||||||||||||||||||||||  | |||||||||    
T  4700127 tttttataaactatcctggagagcttatgaaaataagctgaaaacaactcctaaacatgtca 4700066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 4868409 - 4868478
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||| ||| |||| |||||  ||||||| ||||||| |||||||||||| |  ||||||||||||||||    
T  4868409 ttttcgtaaactattttgaaaagcttatgtaaataagttgaaaacaacttattgacatgtcataagttgt 4868478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 166
Target Start/End: Original strand, 5276324 - 5276369
Alignment:
Q  121 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 166  Q
    ||||| ||||||||  |||||||||||| |||||||||||||||||    
T  5276324 gcttaagaaaataacttgaaaacaacttatgaacatgtcataagtt 5276369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 12477348 - 12477283
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||| |||||||||| || || |  |||| |||||||||||||||||||| || ||||||||||||    
T  12477348 ttttaataagctatcatggagagtgtatggaaataagctgaaaacaacttatggacatgtcataag 12477283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 12593514 - 12593449
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||||||||||||||| || ||||||| ||  || ||||||||||||| || |||||| |||||    
T  12593514 ttttcataagctatcttggagcgcttatggaataaacctgaaaacaacttatgcacatgttataag 12593449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 15579515 - 15579560
Alignment:
Q  123 ttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||| ||||||||||| |||||||| || ||||||||||||||||    
T  15579515 ttatggaaataagctgagaacaacttatggacatgtcataagttgt 15579560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 16981994 - 16981933
Alignment:
Q  102 tcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    |||||||||||| || || ||||||  ||||||||| |||||||||| || |||||||||||    
T  16981994 tcataagctatcatggagagcttatataaataagctaaaaacaacttatggacatgtcataa 16981933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 24460468 - 24460403
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||||| |  || |||||  ||||||||||| ||||| ||| |||||||||||||||    
T  24460468 ttttcataagctatccttgagagcttacaaaaataagctggaaacagcttatgaacatgtcataag 24460403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 26185524 - 26185589
Alignment:
Q  104 ataagctatcttgaagtgcttatgaaaa-taagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||||| || ||||| ||||| || | |||||||||||| || ||||||||||||||||    
T  26185524 ataagctatcttggagagcttacgaaaaatatgttgaaaacaacttatgcacatgtcataagttgt 26185589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 27963431 - 27963366
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||||  || || ||||||  ||||||||| |||||||||| || ||||||||||||    
T  27963431 ttttcataagctattatggagagcttatataaataagctaaaaacaacttatggacatgtcataag 27963366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 28077130 - 28077073
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacat 156  Q
    |||||||||||||| ||  || ||||||  |||||||||||||||||||| |||||||    
T  28077130 ttttcataagctattttagagagcttattgaaataagctgaaaacaacttatgaacat 28077073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 28909999 - 28910064
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||| | |||||   ||||||||||||| |||||||||||| | |||| ||||||||    
T  28909999 ttttcataagctagcatgaagaagttatgaaaataagatgaaaacaacttataaacaagtcataag 28910064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 28935930 - 28935873
Alignment:
Q  106 aagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    |||||||| ||||| ||||||| ||||||||| |||| ||||| || |||||||||||    
T  28935930 aagctatcctgaagagcttatggaaataagctaaaaaaaacttatggacatgtcataa 28935873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 32182280 - 32182337
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacat 156  Q
    |||||| || ||||||||||| ||||| | |||||||||||||| ||||| |||||||    
T  32182280 ttttcaaaatctatcttgaagagcttaaggaaataagctgaaaaaaacttatgaacat 32182337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 166
Target Start/End: Complemental strand, 34278724 - 34278687
Alignment:
Q  129 aaataagctgaaaacaacttgtgaacatgtcataagtt 166  Q
    |||||||||||||||||| | |||||||||||||||||    
T  34278724 aaataagctgaaaacaacctatgaacatgtcataagtt 34278687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 35080130 - 35080061
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||| ||||||| || || |||| |  ||||||||| |||||| ||| |||||||||||||||||||    
T  35080130 ttttcatgagctatcatggagagcttgtcgaaataagctcaaaacagcttatgaacatgtcataagttgt 35080061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 35925703 - 35925764
Alignment:
Q  103 cataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||| || || | ||||| ||||||| |||||||| ||| |||||||||||||||    
T  35925703 cataagctatcatggagagtttatggaaataagttgaaaacagcttatgaacatgtcataag 35925764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 41195254 - 41195189
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||| |||||||| ||  ||||||||||||||||||||| | ||| | || ||||||||||    
T  41195254 ttttcataaactatcttggagaacttatgaaaataagctgaaaaaagcttattaaaatgtcataag 41195189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 45205077 - 45205146
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||||||| || || | | ||| ||||||||||||||||||||  | |||| |||||||||||    
T  45205077 ttttcataagctatcatgtagagttcatggaaataagctgaaaacaacttagggacatatcataagttgt 45205146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 166
Target Start/End: Original strand, 47917275 - 47917312
Alignment:
Q  129 aaataagctgaaaacaacttgtgaacatgtcataagtt 166  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  47917275 aaataagttgaaaacaacttatgaacatgtcataagtt 47917312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 144
Target Start/End: Complemental strand, 19092439 - 19092399
Alignment:
Q  104 ataagctatcttgaagtgcttatgaaaataagctgaaaaca 144  Q
    |||||||||| ||||| ||||||||||||||| ||||||||    
T  19092439 ataagctatcctgaagagcttatgaaaataaggtgaaaaca 19092399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 21254808 - 21254768
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctga 139  Q
    ||||| |||||||||||| || |||||||||||||||||||    
T  21254808 ttttcttaagctatcttggagagcttatgaaaataagctga 21254768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 27145785 - 27145730
Alignment:
Q  110 tatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataagt 165  Q
    ||||||||||  ||||||||||||||||||||| ||||| ||||| |||||||||||    
T  27145785 tatcttgaagaacttatgaaaataagctgaaaa-aacttatgaacaatgtcataagt 27145730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 35017585 - 35017649
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    |||||||||||| || || || ||||||| ||||||| |||||| ||||| || |||||||||||    
T  35017585 ttttcataagctgtcctggagagcttatggaaataagttgaaaataacttatggacatgtcataa 35017649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 35350645 - 35350718
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaata----agctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||||||| | ||| ||||||| |||||    ||||||||||| ||| || ||||||||||||||||    
T  35350645 ttttcataagctatcctaaagagcttatgtaaataagctagctgaaaacagcttatggacatgtcataagttgt 35350718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 9e-20; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 20672739 - 20672824
Alignment:
Q  79 gataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||| ||| | |||| |||||||||| || || |||||||||||||||||||||||| ||| |||||||||||||||    
T  20672739 gataaaataaagtcaaactgtttttataagctatcctggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataag 20672824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 33553229 - 33553317
Alignment:
Q  79 gataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttg 167  Q
    ||||||||||||| ||||| ||||||||||||||||||||| ||||||| ||||||||||  |||| |||  | |||||||||||||||    
T  33553229 gataaaataaagtcaaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttg 33553317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 158
Target Start/End: Complemental strand, 42215145 - 42215084
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgt 158  Q
    |||||||||||||||||||| || ||||||| |||||||||||||||||||| |||||||||    
T  42215145 tattttcataagctatcttggagagcttatgtaaataagctgaaaacaacttatgaacatgt 42215084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 30191204 - 30191133
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||| |||||||||| |||| || ||||| ||||||||||||||||| || |||||||||||||||||||    
T  30191204 tattttgataagctatcctgaaatgtttatggaaataagctgaaaacaagttttgaacatgtcataagttgt 30191133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 141
Target Start/End: Original strand, 11494148 - 11494197
Alignment:
Q  92 taaattattttcataagctatcttgaagtgcttatgaaaataagctgaaa 141  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  11494148 taaactattttcataagctatcttgaagagcttatgaaaataagctgaaa 11494197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 168
Target Start/End: Complemental strand, 13000463 - 13000416
Alignment:
Q  121 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  13000463 gcttatggaaataagctgaaaacaacttgtggacatgtcataagttgt 13000416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 100 - 167
Target Start/End: Original strand, 21653091 - 21653158
Alignment:
Q  100 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttg 167  Q
    |||||| |||||||||| || |||||||||||||||||||||| | ||| ||||| ||||||||||||    
T  21653091 tttcattagctatcttggagagcttatgaaaataagctgaaaatagcttatgaacgtgtcataagttg 21653158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 2595035 - 2594989
Alignment:
Q  122 cttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  2595035 cttatgagaataagctgaaaacaacttatgaacatgtcataagttgt 2594989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 4762518 - 4762564
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaa 145  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||    
T  4762518 ttttcataagctatcttgaagagcttatgtaaataagctgaaaacaa 4762564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 158
Target Start/End: Original strand, 11493972 - 11494033
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgt 158  Q
    |||||||||| |||||||||||| |||||||||| ||||||||| ||| ||| |||||||||    
T  11493972 tattttcatacgctatcttgaagagcttatgaaagtaagctgaacacagcttatgaacatgt 11494033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 11569518 - 11569453
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||||| || || | || ||||||||||||||||||||||| || ||||||||||||    
T  11569518 ttttcataagctatcatggagagattttgaaaataagctgaaaacaacttatgtacatgtcataag 11569453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 25869328 - 25869260
Alignment:
Q  98 attttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 166  Q
    ||||||||| |||||| || || | ||||| |||||||||||||||||||| || ||||||||||||||    
T  25869328 attttcataggctatcatggagagtttatggaaataagctgaaaacaacttatggacatgtcataagtt 25869260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 39866790 - 39866726
Alignment:
Q  104 ataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||||||| |||||||||||||| ||||||||| ||| || |||||  |||||||||    
T  39866790 ataagctatcttgaagagcttatgaaaataaactgaaaacagcttatggacatgctataagttgt 39866726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 166
Target Start/End: Original strand, 14949855 - 14949942
Alignment:
Q  79 gataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 166  Q
    ||||||||| ||| ||| | ||||||||||||||| | ||| | ||||  |||||||||||||||| ||| || ||||||||||||||    
T  14949855 gataaaatagagtcaaactcttttcataagctatcctaaagagattatagaaataagctgaaaacagcttatggacatgtcataagtt 14949942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 142
Target Start/End: Original strand, 27028840 - 27028883
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaa 142  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  27028840 ttttcataagctatcttggagagcttatgaaaataagctgaaaa 27028883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 161
Target Start/End: Original strand, 30389131 - 30389170
Alignment:
Q  122 cttatgaaaataagctgaaaacaacttgtgaacatgtcat 161  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  30389131 cttatgaaaataagctgaaaacaacttatgaacatgtcat 30389170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 160
Target Start/End: Complemental strand, 33714299 - 33714236
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtca 160  Q
    |||||||||||||||||| | || |||||| ||||||||||||||||| ||| |||||| ||||    
T  33714299 tattttcataagctatctgggagagcttataaaaataagctgaaaacagcttatgaacaagtca 33714236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 38421273 - 38421340
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 166  Q
    |||||| ||||||||||||||  ||| || || ||||||||||||||||| || ||||||||||||||    
T  38421273 ttttcaaaagctatcttgaagatcttgtgtaagtaagctgaaaacaacttatggacatgtcataagtt 38421340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 40280308 - 40280253
Alignment:
Q  79 gataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataa 134  Q
    ||||||||||||| ||||| |||||||||||||||| |||| ||||||| ||||||    
T  40280308 gataaaataaagtaaaattgttttcataagctatctagaagagcttatggaaataa 40280253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 164
Target Start/End: Complemental strand, 41606942 - 41606899
Alignment:
Q  121 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||| |||||||||||||||||||| |||||||||||||||    
T  41606942 gcttatggaaataagctgaaaacaacttttgaacatgtcataag 41606899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 164
Target Start/End: Complemental strand, 42215369 - 42215302
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||||||| |||||| || || ||||||| |||||||||||||||| ||| |||||| ||||||||    
T  42215369 tattttcatatgctatcctggagagcttatgtaaataagctgaaaacagcttatgaacaagtcataag 42215302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 3600781 - 3600735
Alignment:
Q  117 aagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    ||||||||||||||||||| |||||||||||| || |||||||||||    
T  3600781 aagtgcttatgaaaataagttgaaaacaacttatggacatgtcataa 3600735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 14339648 - 14339602
Alignment:
Q  117 aagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    ||||||||||||||||||| |||||||||||| || |||||||||||    
T  14339648 aagtgcttatgaaaataagttgaaaacaacttatggacatgtcataa 14339602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 779122 - 779053
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||| |||||||| || |  ||  |||||||| |||||||||||| |||||||||||||||||||    
T  779122 ttttcataaactatcttggagagtgtaccaaaataagatgaaaacaacttatgaacatgtcataagttgt 779053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 4281579 - 4281624
Alignment:
Q  123 ttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||||| |||||||||||| ||||||||||||| |||||    
T  4281579 ttatgaaaataagatgaaaacaacttatgaacatgtcatatgttgt 4281624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 30918122 - 30918190
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||| | ||||| || ||||||| |||||||||||||||||||| |||| |||||| |||||||    
T  30918122 ttttcataagttttcttggagagcttatggaaataagctgaaaacaacttatgaa-atgtcacaagttgt 30918190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 32841022 - 32840977
Alignment:
Q  124 tatgaaaataagctgaaaacaacttgtgaac-atgtcataagttgt 168  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||    
T  32841022 tatgaaaataagctgaaaacaacttatgaacaatgtcataagttgt 32840977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 41620352 - 41620283
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||| |||||||||||||  | |||| ||||||||||| ||||||||||| || ||||||||||| ||||    
T  41620352 tttttataagctatcttgtcgagcttttgaaaataagcggaaaacaacttatggacatgtcataatttgt 41620283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 44236884 - 44236835
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    |||||||||||||| ||| || |||||||||||||||||||||| |||||    
T  44236884 ttttcataagctatattggagagcttatgaaaataagctgaaaataactt 44236835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 2235717 - 2235653
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    |||||||||| |||||| ||| ||||||| |||| |||| ||||| |||| ||||||||||||||    
T  2235717 ttttcataaggtatcttaaagagcttatggaaatgagctaaaaacgacttatgaacatgtcataa 2235653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 155
Target Start/End: Complemental strand, 9956875 - 9956819
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaaca 155  Q
    ||||||||| |||||||| ||  |||||||||||||||||||||| |||| ||||||    
T  9956875 ttttcataatctatcttggagaacttatgaaaataagctgaaaactacttatgaaca 9956819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 168
Target Start/End: Complemental strand, 12224959 - 12224891
Alignment:
Q  100 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||| ||| ||||| ||| || ||||||||||||||| ||||  || ||||||||||||||||    
T  12224959 tttcataagccatcctgaagagctcataaaaataagctgaaaaaaactgatggacatgtcataagttgt 12224891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 27754413 - 27754477
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    |||||||||||||| ||| || ||||||||||||||||||||  |||||| | | ||||||||||    
T  27754413 ttttcataagctattttggagagcttatgaaaataagctgaacgcaacttataatcatgtcataa 27754477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 164
Target Start/End: Complemental strand, 9541059 - 9540992
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||||||| |  || |||| ||||||||||||||| |||| || || ||||||||||||    
T  9541059 tattttcataagctatcctagagagcttttgaaaataagctgaacacaaattatggacatgtcataag 9540992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 160
Target Start/End: Complemental strand, 10075614 - 10075551
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtca 160  Q
    ||||||||||||||||| |  || ||||||||||||||||| ||| || ||||| |||||||||    
T  10075614 tattttcataagctatcctagagagcttatgaaaataagctaaaagcagcttgtcaacatgtca 10075551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 164
Target Start/End: Original strand, 12851179 - 12851250
Alignment:
Q  93 aaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||| |||||||||||| || |  || |||||||||||||||| ||||||| ||| ||||||||| |||||    
T  12851179 aaattgttttcataagctttccttgagagcttatgaaaataagccgaaaacatcttatgaacatgttataag 12851250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 28769400 - 28769337
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcata 162  Q
    |||||||||||||| ||| || | ||||| |||||||||||||||||||| || |||| |||||    
T  28769400 ttttcataagctattttggagagtttatggaaataagctgaaaacaacttatggacatatcata 28769337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 163
Target Start/End: Complemental strand, 28784858 - 28784793
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    |||||||||||||||||||  || |||| | ||||||||||||||| | ||| ||||||||||||||    
T  28784858 tattttcataagctatcttagagagcttgtaaaaataagctgaaaa-agcttatgaacatgtcataa 28784793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 29059857 - 29059795
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcat 161  Q
    |||||||||||||||||||| | || || || |||| ||||||||||| | ||||||||||||    
T  29059857 ttttcataagctatcttgaaatactcattaacataatctgaaaacaacatatgaacatgtcat 29059795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 1930044 - 1930109
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataa 163  Q
    ||||||||||||||||||  |  ||| ||||||||||||||||||| ||| ||||| |||||||||    
T  1930044 ttttcataagctatcttggtgaccttgtgaaaataagctgaaaacagcttatgaacaatgtcataa 1930109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 166
Target Start/End: Complemental strand, 3161662 - 3161617
Alignment:
Q  121 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 166  Q
    |||||| |||||||||||||||||  || |||||||||||||||||    
T  3161662 gcttataaaaataagctgaaaacattttatgaacatgtcataagtt 3161617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 5069706 - 5069771
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||||||| ||||||  |  ||||||||||||||||||||||  |||| ||||||||| |||||    
T  5069706 ttttcataagatatcttcgaaagcttatgaaaataagctgaaaatgacttatgaacatgttataag 5069771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 7918507 - 7918438
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||| |||||||||||| || ||||||  ||||||| || ||||| ||| |||||||||| ||||||||    
T  7918507 ttttcgtaagctatcttggagagcttattgaaataagttggaaacagcttatgaacatgtcttaagttgt 7918438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 7918834 - 7918789
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 144  Q
    |||||||||||||||||| || |||| || ||||||||||||||||    
T  7918834 ttttcataagctatcttgtagagcttgtggaaataagctgaaaaca 7918789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 37353310 - 37353245
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||| |||||||||||  || |||||||||||||| |||||||||  || |||| ||||||||||    
T  37353310 ttttcttaagctatctttgagagcttatgaaaataatctgaaaacagtttatgaatatgtcataag 37353245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 39551270 - 39551201
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||| || || || |||||| |||||||| | |||||| ||| || ||||||||||||||||    
T  39551270 ttttcataagctttcctggagagcttataaaaataagttaaaaacagcttttggacatgtcataagttgt 39551201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 43504760 - 43504829
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||| ||||||||||||| ||  |||||| |||||||||||||||| ||| | |||| ||| ||||||||    
T  43504760 tttttataagctatcttggagaacttatggaaataagctgaaaacagcttataaacaagtcgtaagttgt 43504829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 11000621 - 11000573
Alignment:
Q  115 tgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    ||||| ||||||| |||||||||||| ||||||| |||||| |||||||    
T  11000621 tgaagagcttatggaaataagctgaagacaacttatgaacaagtcataa 11000573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 164
Target Start/End: Original strand, 11795102 - 11795166
Alignment:
Q  100 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||||||||||  || || ||||||| ||||||||||||||||  || || ||||||||||||    
T  11795102 tttcataagctattatggagagcttatggaaataagctgaaaacaggttatggacatgtcataag 11795166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 31168020 - 31168088
Alignment:
Q  96 ttattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||| |||||| ||||| |||| |||||||||| ||||||||||| |  || ||| |||||||||||    
T  31168020 ttatttgcataaggtatctagaagagcttatgaaagtaagctgaaaaaagtttatgagcatgtcataag 31168088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 167
Target Start/End: Original strand, 31862502 - 31862570
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttg 167  Q
    |||||||||| |||| |  || |||||||||||||||||||||||| ||| || | | |||||||||||    
T  31862502 ttttcataagttatcctagagagcttatgaaaataagctgaaaacagcttatgcataggtcataagttg 31862570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 42370419 - 42370359
Alignment:
Q  102 tcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcata 162  Q
    |||||||||||| ||||| | ||||| ||||||||||||||||  ||||  ||||||||||    
T  42370419 tcataagctatcatgaagagtttatggaaataagctgaaaacagtttgtagacatgtcata 42370359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 9e-20; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 7244669 - 7244758
Alignment:
Q  79 gataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||| ||||| ||| | |||||||||||||| ||| || |||||||||||||||||||||||||||| ||| |||||||||| ||||    
T  7244669 gataaaagaaagtcaaactgttttcataagctatattggagagcttatgaaaataagctgaaaacaacttatgagcatgtcataaattgt 7244758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 164
Target Start/End: Complemental strand, 22551484 - 22551401
Alignment:
Q  81 taaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||| ||||| ||||||||||  |||||| || ||||||| |||||||||||||||||| | |||||||||||||||    
T  22551484 taaaataaagtcaaattcttttcataagtaatcttggagagcttatgtaaataagctgaaaacaacatttgaacatgtcataag 22551401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 12110369 - 12110438
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||||||||||||  ||||||||||||| || ||||||  ||||||||||||||||||||||    
T  12110369 ttttcataagctatcttgaagaacttatgaaaataatctaaaaacagtttgtgaacatgtcataagttgt 12110438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 48917416 - 48917341
Alignment:
Q  90 gttaaattattttcataagctatcttgaagtgcttatgaaaataagctg--aaaacaacttgtgaacatgtcataa 163  Q
    ||||| || |||||||||||||||||| || ||||||||||||||||||  || ||||||||||||||||||||||    
T  48917416 gttaagttgttttcataagctatcttggagagcttatgaaaataagctggaaacacaacttgtgaacatgtcataa 48917341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 12792626 - 12792579
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 144  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12792626 tattttcataagctatcttgaagagcttatgaaaataagctgaaaaca 12792579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 529384 - 529461
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgtccaaaata 176  Q
    |||||||||||||||||| || ||||||||||||| | |||||||| ||| ||||| ||||||||||| ||| |||||    
T  529384 ttttcataagctatcttggagagcttatgaaaatatgttgaaaacagcttatgaacttgtcataagttctcccaaata 529461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 166
Target Start/End: Original strand, 34035907 - 34035994
Alignment:
Q  80 ataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataagtt 166  Q
    |||| ||||||||||||| |||||||||||||||||  ||  |||  ||||||||| |||||||||||| ||||| ||||||||||||    
T  34035907 ataatataaagttaaattgttttcataagctatcttagagaacttgcgaaaataagttgaaaacaacttatgaacaatgtcataagtt 34035994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 46825107 - 46825178
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatga-aaataagct-gaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||||||||| ||||||||||| |||||||||  ||||||||| ||| ||||||||||||||||    
T  46825107 ttttcataagctatcttggagtgcttatgagaaataagctaaaaaacaactcgtggacatgtcataagttgt 46825178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 25596042 - 25596091
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    |||||||||||||||||| || ||||||||||||||| ||||||||||||    
T  25596042 ttttcataagctatcttggagagcttatgaaaataagttgaaaacaactt 25596091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 6552360 - 6552288
Alignment:
Q  92 taaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||| ||||||||||| ||||| || || | |||||||||||||||||||||| ||| |||| ||||||||||    
T  6552360 taaactattttcataaactatcatgcagagtttatgaaaataagctgaaaacagcttatgaatatgtcataag 6552288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 43250782 - 43250695
Alignment:
Q  79 gataaaataaagttaaattattttc--ataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||||||||||||| |  |||||  ||||||||| ||| || ||||||||| |||| |||||||||||||  ||||||||||||||    
T  43250782 gataaaataaagttaattgtttttcgtataagctattttggagagcttatgaatataaactgaaaacaacttacgaacatgtcataag 43250695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 44151541 - 44151477
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    ||||||||| ||||||||||  ||||||| |||||||||||||||| ||| || |||||||||||    
T  44151541 ttttcataaactatcttgaaaagcttatggaaataagctgaaaacatcttatggacatgtcataa 44151477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 21247939 - 21248002
Alignment:
Q  104 ataagctatcttgaagtgctta-tgaaaataagctgaaaacaacttgtgaacatgtcataagtt 166  Q
    |||| |||||||| || ||||| |||||||||||| |||||||||| |||||||||||||||||    
T  21247939 ataacctatcttggagagcttactgaaaataagcttaaaacaacttatgaacatgtcataagtt 21248002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 168
Target Start/End: Original strand, 46082067 - 46082114
Alignment:
Q  121 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||||||||||||||||||| ||  |||||||||||||||    
T  46082067 gcttatgaaaataagctgaaaacaacttatggtcatgtcataagttgt 46082114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 168
Target Start/End: Complemental strand, 47134796 - 47134749
Alignment:
Q  121 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||||||||||||||||||| || || |||||||||||||    
T  47134796 gcttatgaaaataagctgaaaacaacttatggacgtgtcataagttgt 47134749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 165
Target Start/End: Original strand, 4966165 - 4966231
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagt 165  Q
    ||||||||||| ||| ||||| ||||||| |||||| ||||||||||||| || |||| ||||||||    
T  4966165 ttttcataagccatcctgaagagcttatggaaataaactgaaaacaacttatggacatatcataagt 4966231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 11048059 - 11048105
Alignment:
Q  122 cttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||||||    
T  11048059 cttatgagaataagctgaaaacagcttatgaacatgtcataagttgt 11048105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 25670636 - 25670578
Alignment:
Q  110 tatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||| || |||| |||||||||||||||||||| || | |||||||||||||||||    
T  25670636 tatcttggagagcttgtgaaaataagctgaaaacaatttattaacatgtcataagttgt 25670578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 9423655 - 9423586
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||| |||||||||| || || |||| |  |||||||||||||||||||| |||||||||||||| ||||    
T  9423655 ttttaataagctatcctggagagcttcttgaaataagctgaaaacaacttatgaacatgtcataaattgt 9423586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 12792687 - 12792642
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaa 142  Q
    ||||||||||||||||||||||| || |||| ||||||||||||||    
T  12792687 tattttcataagctatcttgaagagcatatggaaataagctgaaaa 12792642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 160
Target Start/End: Complemental strand, 24363662 - 24363601
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtca 160  Q
    ||||||||||||||| || || | ||||| |||||||||||||||||||| || ||||||||    
T  24363662 ttttcataagctatcctggagaggttatggaaataagctgaaaacaacttatggacatgtca 24363601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 29286804 - 29286864
Alignment:
Q  103 cataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    |||||| ||| |||||  ||||||| |||||||||||||||||||  ||||||||||||||    
T  29286804 cataagttattttgaaaagcttatgtaaataagctgaaaacaactgatgaacatgtcataa 29286864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 30316968 - 30317040
Alignment:
Q  96 ttattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||||| ||||||||| ||| || ||||||||| |||||||| ||| | ||||| | |||||||||    
T  30316968 ttattttcataaggtatcttgaaatgcatacgaaaataagttgaaaacagcttattaacattttataagttgt 30317040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 12792561 - 12792514
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 144  Q
    ||||||||||||||||||||||| ||||||  ||||||||||| ||||    
T  12792561 tattttcataagctatcttgaagagcttattgaaataagctgataaca 12792514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 168
Target Start/End: Complemental strand, 20888425 - 20888386
Alignment:
Q  129 aaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||||||||||| |||||||| ||||||||||    
T  20888425 aaataagctgaaaacaacttatgaacatggcataagttgt 20888386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 164
Target Start/End: Original strand, 35267377 - 35267436
Alignment:
Q  105 taagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||| ||||||| || ||||||  |||||||||||||||||| | |||||||||||||||    
T  35267377 taagttatcttggagagcttatagaaataagctgaaaacaacctatgaacatgtcataag 35267436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 44808183 - 44808234
Alignment:
Q  115 tgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 166  Q
    ||||| ||||||||||||||||||||||||  || || ||||||||||||||    
T  44808183 tgaagggcttatgaaaataagctgaaaacaggttatggacatgtcataagtt 44808234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 142
Target Start/End: Complemental strand, 5018023 - 5017958
Alignment:
Q  79 gataaaataaagttaaattattttc--ataagctatcttgaagtgcttatgaaaataagctgaaaa 142  Q
    ||||||||||||| |||||| | ||  |||||||||||||||  ||||||| ||||||||||||||    
T  5018023 gataaaataaagtcaaattactctcttataagctatcttgaaaagcttatggaaataagctgaaaa 5017958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 36537944 - 36537986
Alignment:
Q  126 tgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||| ||||| |||||||||| |||||||||||||||||||    
T  36537944 tgaaaaaaagctaaaaacaacttatgaacatgtcataagttgt 36537986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 158
Target Start/End: Original strand, 42656482 - 42656563
Alignment:
Q  79 gataaaataaagttaaattattttc--ataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgt 158  Q
    ||||||||||||| |||| |||||   ||||||||||||| || |||||||||||||||| | |||||  || |||||||||    
T  42656482 gataaaataaagtcaaatcatttttgtataagctatcttggagagcttatgaaaataagccgcaaacattttatgaacatgt 42656563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 164
Target Start/End: Complemental strand, 43219682 - 43219640
Alignment:
Q  122 cttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||    
T  43219682 cttatgagaataagctgaaaacagcttatgaacatgtcataag 43219640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 9038121 - 9038185
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||| ||||| || ||  ||| |||||||||||||||||||| || |||||||||||||||    
T  9038121 ttttcataaactatcatggagaacttgtgaaaataagctgaaaacaa-ttatgaacatgtcataag 9038185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 168
Target Start/End: Complemental strand, 15740448 - 15740403
Alignment:
Q  123 ttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||||| | |||||| ||| |||||||||||||||||||    
T  15740448 ttatgaaaataagttaaaaacagcttatgaacatgtcataagttgt 15740403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 18962633 - 18962588
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 144  Q
    |||||||||||||||||| ||  |||||||||||||| ||||||||    
T  18962633 ttttcataagctatcttggaggccttatgaaaataaggtgaaaaca 18962588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 18965771 - 18965726
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 144  Q
    |||||||||||||||||| ||  |||||||||| ||||||||||||    
T  18965771 ttttcataagctatcttggaggtcttatgaaaacaagctgaaaaca 18965726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 27378889 - 27378840
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    ||||||||| ||||| || || |||||||||||||| |||||||||||||    
T  27378889 ttttcataaactatcctggagagcttatgaaaataaactgaaaacaactt 27378840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 33646021 - 33645953
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||||||| || | ||||||| |||||| || |||||||||| |  ||||||||||||||||    
T  33646021 ttttcataagctatctgga-gagcttatggaaataacctaaaaacaacttatagacatgtcataagttgt 33645953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 45859587 - 45859519
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||  ||||| ||||| ||||||  |||||||||||||||||| | ||||||||||||| |||||    
T  45859587 ttttcatagactatcatgaagagcttatagaaataagctgaaaacaac-tatgaacatgtcatatgttgt 45859519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 46104628 - 46104583
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 144  Q
    ||||||||||||||  ||||| |||||||||||||||||| |||||    
T  46104628 ttttcataagctatgctgaagagcttatgaaaataagctggaaaca 46104583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 160
Target Start/End: Complemental strand, 47559662 - 47559601
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtca 160  Q
    |||||||||| ||| ||| ||  ||||||||||| ||| ||||||||||| |||||||||||    
T  47559662 ttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatgtca 47559601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 3836765 - 3836702
Alignment:
Q  79 gataaaataaagttaaattattttc--ataagctatcttgaagtgcttatgaaaataagctgaa 140  Q
    |||||||| ||||||||| ||||||  ||||||||||||| || ||| ||||||||||| ||||    
T  3836765 gataaaatcaagttaaatgattttcgtataagctatcttggagagctaatgaaaataagttgaa 3836702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 6226192 - 6226148
Alignment:
Q  124 tatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||||||||||||||||| ||| |||| ||| ||||||    
T  6226192 tatgaaaataagctgaaaacaacttatgagcatgacattagttgt 6226148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 157
Target Start/End: Original strand, 7623145 - 7623205
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatg 157  Q
    ||||||||||| ||||||||||| | ||| ||||||||||  |||||||||| || |||||    
T  7623145 tattttcataaactatcttgaagagtttacgaaaataagccaaaaacaacttatggacatg 7623205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 9872906 - 9872950
Alignment:
Q  124 tatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||| ||||| ||||||||| || ||||||||||||||||    
T  9872906 tatgaaaatgagctggaaacaacttatggacatgtcataagttgt 9872950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 33601195 - 33601127
Alignment:
Q  80 ataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    |||||||||||| ||| | ||||||||||||||    ||| | ||||||||||||||| ||||||||||    
T  33601195 ataaaataaagtcaaactgttttcataagctattgcaaagagtttatgaaaataagctaaaaacaactt 33601127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 33871265 - 33871322
Alignment:
Q  104 ataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    ||||||||||||| || || |||  ||||||||| |||||||||| ||||||||||||||    
T  33871265 ataagctatcttggagagcatat--aaataagctcaaaacaacttatgaacatgtcataa 33871322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 158
Target Start/End: Original strand, 35007633 - 35007665
Alignment:
Q  126 tgaaaataagctgaaaacaacttgtgaacatgt 158  Q
    ||||||||||||||||||||||| |||||||||    
T  35007633 tgaaaataagctgaaaacaacttatgaacatgt 35007665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 39345480 - 39345544
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    |||||| |||||||| ||| |  |||||| ||||||||||||| |||||| || |||||||||||    
T  39345480 ttttcaaaagctatcctgacgaccttatggaaataagctgaaagcaacttatggacatgtcataa 39345544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 39539813 - 39539773
Alignment:
Q  128 aaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||||||||| ||| || ||||||||||||||||    
T  39539813 aaaataagctgaaaacagcttatggacatgtcataagttgt 39539773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 9e-20; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 33887839 - 33887904
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||||| |||| |||||||| ||||||| ||||||||||||||||||||||||||||    
T  33887839 ttttcataagctatcctgaaatgcttatggaaataagttgaaaacaacttgtgaacatgtcataag 33887904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 4420649 - 4420721
Alignment:
Q  96 ttattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||| |||||||||||| || ||||||| |||||||||||||||| ||| |||||||||||||| ||||    
T  4420649 ttattttcctaagctatcttggagagcttatggaaataagctgaaaacagcttatgaacatgtcataatttgt 4420721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 6647396 - 6647461
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||||||||||||||  || ||||||||||||||| |||||||| ||| |||||||||||||||    
T  6647396 ttttcataagctatcttagagagcttatgaaaataagttgaaaacatcttatgaacatgtcataag 6647461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 6536972 - 6537023
Alignment:
Q  115 tgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 166  Q
    ||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  6536972 tgaagagcttatggaaataagctgaaaacaacttatgaacatgtcataagtt 6537023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 9027604 - 9027654
Alignment:
Q  116 gaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 166  Q
    |||| |||||||||||||||||||||||||||| || ||||||||||||||    
T  9027604 gaagagcttatgaaaataagctgaaaacaacttatggacatgtcataagtt 9027654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 13908479 - 13908537
Alignment:
Q  106 aagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||||| ||||| |||||||||||||||||||||||| |||  ||||||||||||||    
T  13908479 aagctatcatgaagagcttatgaaaataagctgaaaacagcttacgaacatgtcataag 13908537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 31583668 - 31583750
Alignment:
Q  79 gataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcat 161  Q
    |||||||| |||| ||||| |||||||||||||||  |||  ||||||| ||||||| |||||||||||| || |||||||||    
T  31583668 gataaaatgaagtcaaattgttttcataagctatcccgaaaagcttatggaaataagttgaaaacaacttatggacatgtcat 31583750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 2112209 - 2112278
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||| |||||||  |||||||||  |||||| | ||||||||||| |||||||||||||||||||    
T  2112209 ttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgt 2112278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 2205671 - 2205610
Alignment:
Q  79 gataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaa 140  Q
    ||||||| ||||| ||||| |||||||||||||||||| || ||||||| ||||||||||||    
T  2205671 gataaaacaaagtcaaattgttttcataagctatcttggagagcttatggaaataagctgaa 2205610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 3528812 - 3528881
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||| | |||||||| || ||||||||||||||| ||||||||| || || ||||||||||||||||    
T  3528812 ttttcatgaactatcttggagagcttatgaaaataagatgaaaacaagttatggacatgtcataagttgt 3528881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 30863255 - 30863324
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||| |||| ||||||| ||||||  || ||||||||||||||||| || ||||||||||||||||    
T  30863255 ttttcataggctagcttgaagagcttatagaagtaagctgaaaacaacttatgtacatgtcataagttgt 30863324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 26694880 - 26694931
Alignment:
Q  92 taaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaac 143  Q
    |||||| ||||||||| |||||||||||  ||||||||||||||||||||||    
T  26694880 taaattgttttcataaactatcttgaagaacttatgaaaataagctgaaaac 26694931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 835310 - 835265
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 144  Q
    |||||||||||||||||| ||  |||||||||||||||||||||||    
T  835310 ttttcataagctatcttggagaacttatgaaaataagctgaaaaca 835265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 5564189 - 5564124
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||||||||| |||||||| | ||||| |||||||||||||||| |||  | ||||||||||||    
T  5564189 ttttcataagctgtcttgaagagtttatgcaaataagctgaaaacagctttcggacatgtcataag 5564124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 7931787 - 7931718
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||| |||||||| |  || ||||| | ||||||||||||||||||||  ||||||||||||||||||    
T  7931787 ttttcaaaagctatcctacagagcttacggaaataagctgaaaacaacttaagaacatgtcataagttgt 7931718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 10616602 - 10616533
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||| ||||||||| ||| || |||||| ||||||||||||| |||||||  | ||||||||||||||||    
T  10616602 ttttaataagctattttggagagcttataaaaataagctgaacacaacttacggacatgtcataagttgt 10616533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 20368241 - 20368172
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||| ||||| ||  |||||||||||||| |||||  | ||| |||||||||||||||||||    
T  20368241 ttttcataagctttcttggagaacttatgaaaataagttgaaactagcttatgaacatgtcataagttgt 20368172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 27894055 - 27894100
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 144  Q
    |||||||||| |||||||||  ||||||||||||||||||||||||    
T  27894055 ttttcataagatatcttgaaaagcttatgaaaataagctgaaaaca 27894100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 31624099 - 31624164
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||||| ||||||||| ||   ||||||||||||| |||||||| ||| |||||||||||||||    
T  31624099 ttttcataggctatcttggagaaattatgaaaataagttgaaaacagcttatgaacatgtcataag 31624164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 32386624 - 32386559
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||| || |||| || || ||||||||||||||||||||||||| ||||| |||||| |||||    
T  32386624 ttttcattagttatcctggagagcttatgaaaataagctgaaaacaagttgtggacatgttataag 32386559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 34403864 - 34403933
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||| |  | ||| ||||||| ||||||| |||||||| ||| |||||||||||||||||||    
T  34403864 ttttcataagctgtactaaagagcttatggaaataaggtgaaaacaccttatgaacatgtcataagttgt 34403933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 34939526 - 34939591
Alignment:
Q  103 cataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||| ||||| | ||||| ||||||||||||||||||||  | || |||||||||||||    
T  34939526 cataagctatcctgaagaggttatggaaataagctgaaaacaacttacggacgtgtcataagttgt 34939591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 2455816 - 2455888
Alignment:
Q  96 ttattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||||||||||||| || ||||||| ||||||| |||||| |  || ||  |||||||||||||||    
T  2455816 ttattttcataagctatcttggagagcttatggaaataagttgaaaatagtttatgggcatgtcataagttgt 2455888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 17241314 - 17241254
Alignment:
Q  98 attttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgt 158  Q
    |||||||| |||||||||| || | ||||| ||||||| |||||||||||| |||||||||    
T  17241314 attttcattagctatcttggagagtttatggaaataagttgaaaacaacttatgaacatgt 17241254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 19275697 - 19275633
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    ||||||||||||||| ||||| ||||||| |||||| | |||| || |||||| |||||||||||    
T  19275697 ttttcataagctatcatgaagagcttatggaaataaaccgaaatcagcttgtggacatgtcataa 19275633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 20370892 - 20370940
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaact 147  Q
    |||||||| ||||||| | |||||||||||||||||| |||||||||||    
T  20370892 ttttcatatgctatctaggagtgcttatgaaaataagatgaaaacaact 20370940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 20512704 - 20512656
Alignment:
Q  100 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    |||||||||||||  ||||| ||||||| ||||||||||||||||||||    
T  20512704 tttcataagctattatgaagagcttatggaaataagctgaaaacaactt 20512656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 29837148 - 29837077
Alignment:
Q  96 ttattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||| ||||| ||||| |||||||||||| ||||| ||||||||| | || |||||| |||||||    
T  29837148 ttattttcataaactatcctgaagagcttatgaaaattagctg-aaacaacttataaatatgtcagaagttgt 29837077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 33832309 - 33832265
Alignment:
Q  124 tatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||||| |||||||||| | |||||||||||||||||    
T  33832309 tatgaaaataagctaaaaacaacttataaacatgtcataagttgt 33832265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 163
Target Start/End: Original strand, 821833 - 821872
Alignment:
Q  124 tatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    ||||||||||||||||||||| ||| ||||||||||||||    
T  821833 tatgaaaataagctgaaaacagcttatgaacatgtcataa 821872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 8365037 - 8364970
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 166  Q
    ||||||||||||||| ||  |  || |||||||||||||||||||| ||||| |||||||||| ||||    
T  8365037 ttttcataagctatcatggtgaactgatgaaaataagctgaaaacagcttgtaaacatgtcatcagtt 8364970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 168
Target Start/End: Original strand, 31420976 - 31421023
Alignment:
Q  121 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||||||||||||||||||| |||| |||  |||||||||    
T  31420976 gcttatgaaaataagctgaaaacaacttatgaatatgcgataagttgt 31421023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 164
Target Start/End: Original strand, 34939755 - 34939818
Alignment:
Q  101 ttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||| || || | ||||| ||||||||||||||||| || || ||||||||||||    
T  34939755 ttcataagctatcctggagagtttatggaaataagctgaaaacaatttatggacatgtcataag 34939818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 167
Target Start/End: Complemental strand, 281907 - 281841
Alignment:
Q  101 ttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttg 167  Q
    ||||||||||||| |  || ||| ||| |||||||||||||||||||| |  |||||||||||||||    
T  281907 ttcataagctatcctagagagctcatggaaataagctgaaaacaacttatagacatgtcataagttg 281841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 696634 - 696676
Alignment:
Q  122 cttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||    
T  696634 cttatgagaataagctgaaaacagcttatgaacatgtcataag 696676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 167
Target Start/End: Original strand, 10031723 - 10031809
Alignment:
Q  82 aaaataaagttaaa-ttattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttg 167  Q
    |||||||||||||| || |||| ||||||| ||||| || ||||| | ||||||| |||||||||||| || | ||||| |||||||    
T  10031723 aaaataaagttaaaattgtttttataagctgtcttggagagcttaaggaaataagatgaaaacaacttatggatatgtcgtaagttg 10031809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 163
Target Start/End: Complemental strand, 29296334 - 29296292
Alignment:
Q  121 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    |||||||||||||||||||||| ||||| || |||||||||||    
T  29296334 gcttatgaaaataagctgaaaataacttatggacatgtcataa 29296292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 137
Target Start/End: Complemental strand, 31812074 - 31812036
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagct 137  Q
    |||||||||||||||||| || |||||||||||||||||    
T  31812074 ttttcataagctatcttggagagcttatgaaaataagct 31812036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 166
Target Start/End: Complemental strand, 733208 - 733171
Alignment:
Q  129 aaataagctgaaaacaacttgtgaacatgtcataagtt 166  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  733208 aaatatgctgaaaacaacttgtggacatgtcataagtt 733171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 1497990 - 1498035
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 144  Q
    ||||||||| |||||||| || ||||||||||||||| ||||||||    
T  1497990 ttttcataaactatcttggagagcttatgaaaataaggtgaaaaca 1498035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 1575928 - 1575973
Alignment:
Q  123 ttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||||| | |||||| ||| |||||||||||||||||||    
T  1575928 ttatgaaaataagttaaaaacagcttatgaacatgtcataagttgt 1575973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 13907856 - 13907901
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 144  Q
    |||||| |||||||||||||| |||||||||||||| | |||||||    
T  13907856 ttttcaaaagctatcttgaagagcttatgaaaataaacggaaaaca 13907901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 162
Target Start/End: Complemental strand, 27909677 - 27909636
Alignment:
Q  121 gcttatgaaaataagctgaaaacaacttgtgaacatgtcata 162  Q
    ||||||| |||||||||||||||||||| || ||||||||||    
T  27909677 gcttatggaaataagctgaaaacaacttatggacatgtcata 27909636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 32387118 - 32387073
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaa 142  Q
    |||||||||||| |||  ||||| ||||||||||||||||||||||    
T  32387118 tattttcataagttattctgaagagcttatgaaaataagctgaaaa 32387073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 33089515 - 33089580
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||||||||  | || |||||||||||||  |||||||||| | |||||||| ||||    
T  33089515 ttttcataagctatcttggggagcctatgaaaataagcgtaaaacaacttataaacatgtcctaag 33089580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 7785796 - 7785740
Alignment:
Q  108 gctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||| ||| || ||||||| |||||||||||||||||||| |  ||||||||||||    
T  7785796 gctattttggagagcttatggaaataagctgaaaacaacttatagacatgtcataag 7785740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 164
Target Start/End: Complemental strand, 11600938 - 11600870
Alignment:
Q  96 ttattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||||| |  ||||| || ||||||||||||||||||| |  || || ||||||||||||    
T  11600938 ttattttcataagctgttctgaagagcctatgaaaataagctgaaaatagtttttggacatgtcataag 11600870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 155
Target Start/End: Original strand, 13907594 - 13907650
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaaca 155  Q
    ||||||||||| |||||| ||   |||||||||||| ||||||| ||||||||||||    
T  13907594 ttttcataagccatcttggagaaattatgaaaataaactgaaaataacttgtgaaca 13907650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 32578042 - 32577978
Alignment:
Q  104 ataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||| ||||| || |||| |||||||||||||||| ||   | ||||||||||||||||    
T  32578042 ataagctatcctgaagagcatatggaaataagctgaaaacagctcaaggacatgtcataagttgt 32577978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 1e-18; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 164
Target Start/End: Original strand, 36139897 - 36139952
Alignment:
Q  109 ctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  36139897 ctatcttgaagagcttatgaaaataagctgaaaacagcttgtgaacatgtcataag 36139952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 164
Target Start/End: Original strand, 36101587 - 36101642
Alignment:
Q  109 ctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  36101587 ctatcctgaagagcttatgaaaataagctgaaaacagcttgtgaacatgtcataag 36101642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 36887513 - 36887580
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 166  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||| ||| ||||||||||| |||||    
T  36887513 ttttcataagccatcttgaagaacttatgaaaataagctgaaaacatcttatgaacatgtcaaaagtt 36887580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 21367676 - 21367742
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataag 164  Q
    |||||||||||||||||| ||  ||||||||||||||||||||||| ||||||||| ||||||||||    
T  21367676 ttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaacaatgtcataag 21367742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 16790459 - 16790394
Alignment:
Q  79 gataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 144  Q
    ||||||||||| | |||||||||||||||||||||||| |  |||||||||||||| |||||||||    
T  16790459 gataaaataaaatcaaattattttcataagctatcttggatagcttatgaaaataaactgaaaaca 16790394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 37273143 - 37273212
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||||||||| ||  |||||| ||||||| |||||||||||| || ||||||||||||||||    
T  37273143 ttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcataagttgt 37273212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 23808120 - 23808060
Alignment:
Q  104 ataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||| || | ||||||||||||| ||||||||| ||||||||||||||||||    
T  23808120 ataagctatcttggagagtttatgaaaataagatgaaaacaatttgtgaacatgtcataag 23808060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 164
Target Start/End: Complemental strand, 54837098 - 54837030
Alignment:
Q  96 ttattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||||||||||| |  |||||| ||||||||| |||||||| || |||||||||||||||    
T  54837098 ttattttcataagctatcttggacagcttataaaaataagcggaaaacaagttatgaacatgtcataag 54837030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 20669181 - 20669244
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcata 162  Q
    |||||||||||||||||| || ||||||| |||||||| ||||||| ||| |||||||||||||    
T  20669181 ttttcataagctatcttggagagcttatgtaaataagcggaaaacagcttatgaacatgtcata 20669244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 103 - 162
Target Start/End: Complemental strand, 33883807 - 33883748
Alignment:
Q  103 cataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcata 162  Q
    |||||||||||||  ||  ||||||||||||||||||||||||||| |||||||||||||    
T  33883807 cataagctatcttagagaacttatgaaaataagctgaaaacaacttatgaacatgtcata 33883748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 42745053 - 42745116
Alignment:
Q  105 taagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||| ||  ||||||| ||||||| |||||||||||| |||||||||||||||||||    
T  42745053 taagctatcttcaaaagcttatggaaataagatgaaaacaacttatgaacatgtcataagttgt 42745116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 164
Target Start/End: Complemental strand, 52440725 - 52440658
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||||||||  ||||||||||  ||||||||||| || |||||||||||| |||||||||||||||    
T  52440725 tattttcataatttatcttgaagaacttatgaaaattagttgaaaacaacttatgaacatgtcataag 52440658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 39602271 - 39602201
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgtc 169  Q
    |||||||||||||||||  ||  |||||||||||||| ||||||||| || ||||||||||||||| ||||    
T  39602271 ttttcataagctatctttgagaacttatgaaaataagttgaaaacaatttatgaacatgtcataagctgtc 39602201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 40665438 - 40665500
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcat 161  Q
    |||||||||| ||||||| || |||||| ||||||||||||||||| ||| ||||||||||||    
T  40665438 ttttcataagttatcttggagagcttataaaaataagctgaaaacagcttatgaacatgtcat 40665500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 24785214 - 24785279
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||||| |  || ||||||| ||||||||| |||||||||| |||||||||||||||    
T  24785214 ttttcataagctatcctcgagagcttatgtaaataagctaaaaacaacttatgaacatgtcataag 24785279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 30573975 - 30573906
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||||||||| || ||| ||||| |||||||||||||| ||| |||||||| ||||| ||||    
T  30573975 ttttcataagctatcttggagagctgatgaacataagctgaaaacagcttatgaacatgccataatttgt 30573906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 146
Target Start/End: Complemental strand, 34924601 - 34924552
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaac 146  Q
    |||||||||||||||||||  || ||||||||||||||||||||||||||    
T  34924601 tattttcataagctatcttagagagcttatgaaaataagctgaaaacaac 34924552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 52619012 - 52619081
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||| |||||||||||||| |||| |||||||||| |||||| | ||| |||||||||||||| ||||    
T  52619012 ttttcacaagctatcttgaagagcttgtgaaaataaggtgaaaatagcttatgaacatgtcataaattgt 52619081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 36200110 - 36200174
Alignment:
Q  104 ataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||| || || ||| ||| |||||||||||||||||||| || ||||||||||||||||    
T  36200110 ataagctatcctgtagagctcatggaaataagctgaaaacaacttatggacatgtcataagttgt 36200174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 45541577 - 45541645
Alignment:
Q  96 ttattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||||||||||| |   ||||||| ||||| ||||||||| ||| |||||||||||||||    
T  45541577 ttattttcataagctatcttggataacttatgagaataacctgaaaacagcttatgaacatgtcataag 45541645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 168
Target Start/End: Complemental strand, 3044298 - 3044251
Alignment:
Q  121 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||||||| |||||||| ||| |||||||||||||||||||    
T  3044298 gcttatgaaaataagttgaaaacagcttatgaacatgtcataagttgt 3044251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 45433007 - 45432936
Alignment:
Q  92 taaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    |||||| |||||| |||  ||| || || ||||||| |||||||||||||||||||| ||||||||||||||    
T  45433007 taaattgttttcacaagtcatcctgtagagcttatggaaataagctgaaaacaacttatgaacatgtcataa 45432936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 158
Target Start/End: Complemental strand, 53736181 - 53736122
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgt 158  Q
    ||||||||| ||||  ||||||| ||||||||||||||||||| |||||| |||||||||    
T  53736181 ttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacatgt 53736122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 96 - 142
Target Start/End: Original strand, 2825153 - 2825199
Alignment:
Q  96 ttattttcataagctatcttgaagtgcttatgaaaataagctgaaaa 142  Q
    ||||||||||||||||||||| || ||||||||||||||||| ||||    
T  2825153 ttattttcataagctatcttggagagcttatgaaaataagcttaaaa 2825199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 20502129 - 20502083
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaa 145  Q
    ||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  20502129 ttttcataagctatcctgaagagcttatgagaataagctgaaaacaa 20502083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 163
Target Start/End: Complemental strand, 36878819 - 36878753
Alignment:
Q  98 attttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataa 163  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||  |||||| || |||||||||    
T  36878819 attttcataagctatcttgaagaacttatgaaaaaaagctgaaaaccgcttgtggacaatgtcataa 36878753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 2719477 - 2719526
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    |||||||||||||||||| ||  |||||||||||||||||| ||||||||    
T  2719477 ttttcataagctatcttggagaacttatgaaaataagctgagaacaactt 2719526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 8933796 - 8933861
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||||||| ||||||| || ||||||||||||||||| ||  |||||| || ||||||||||||    
T  8933796 ttttcataagttatcttggagagcttatgaaaataagctaaatgcaacttttggacatgtcataag 8933861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 166
Target Start/End: Original strand, 25925773 - 25925818
Alignment:
Q  121 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 166  Q
    ||||||||||||||| |||||||| ||| |||||||||||||||||    
T  25925773 gcttatgaaaataagttgaaaacagcttatgaacatgtcataagtt 25925818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 35394559 - 35394494
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataa 163  Q
    |||||||||||||||||||||   ||||||||||||| |||||||| ||| ||||| |||||||||    
T  35394559 ttttcataagctatcttgaagaatttatgaaaataagttgaaaacagcttatgaacaatgtcataa 35394494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 37825111 - 37825196
Alignment:
Q  79 gataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||| || |||||||||| |||| || |||| || || || ||||||| |||||| ||||||||||||| || ||||||||||||    
T  37825111 gataatatcaagttaaattgtttttattagctttcctggagagcttatggaaataacctgaaaacaacttatggacatgtcataag 37825196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 47249538 - 47249481
Alignment:
Q  108 gctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagt 165  Q
    ||||||||| ||  |||||||||||||||  |||||||||| ||||||||||||||||    
T  47249538 gctatcttggaggacttatgaaaataagccaaaaacaacttatgaacatgtcataagt 47249481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 47513670 - 47513731
Alignment:
Q  107 agctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||| || ||||||||||||||  |||||||||||| ||||| |||||||| ||||    
T  47513670 agctatcttggagagcttatgaaaataaattgaaaacaacttatgaacgtgtcataacttgt 47513731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 50600239 - 50600170
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||| |||||| ||| ||  ||||||||||||||||||||||| || ||| ||||||||| ||||||    
T  50600239 ttttcatcagctatattggagaacttatgaaaataagctgaaaacagctcgtggacatgtcatgagttgt 50600170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 12985425 - 12985357
Alignment:
Q  80 ataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    ||||||||||| |||| | ||||||||||||||| | |||  |||||| |||||||| |||||||||||    
T  12985425 ataaaataaagataaactgttttcataagctatcctcaagaacttatggaaataagccgaaaacaactt 12985357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 13371127 - 13371175
Alignment:
Q  100 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    |||||||||||||  ||||| ||||||| ||||||||||||||||||||    
T  13371127 tttcataagctattatgaagagcttatggaaataagctgaaaacaactt 13371175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 155
Target Start/End: Complemental strand, 26320163 - 26320107
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaaca 155  Q
    |||||||||||| ||||||||  |||| |||||||| ||||||||||||| ||||||    
T  26320163 ttttcataagctctcttgaagaacttacgaaaataaactgaaaacaacttatgaaca 26320107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 26478943 - 26479003
Alignment:
Q  88 aagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    |||||||||||||||||||||||||| | ||| |  |||||||||||| | ||||||||||    
T  26478943 aagttaaattattttcataagctatcctaaagagtatatgaaaataagttaaaaacaactt 26479003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 29771852 - 29771916
Alignment:
Q  104 ataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||||||   ||||||| ||||||| |||||||||||| || ||||||| ||||||||    
T  29771852 ataagctatcttgagaagcttatggaaataagttgaaaacaacttatggacatgtcctaagttgt 29771916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 33965550 - 33965486
Alignment:
Q  99 ttttcataagctatcttgaagtgcttat-gaaaataagctgaaaacaacttgtgaacatgtcata 162  Q
    ||||||||||||||||||||| |||||| ||||| |||||||||| ||||| ||  |||||||||    
T  33965550 ttttcataagctatcttgaagagcttatggaaaaaaagctgaaaataacttatgggcatgtcata 33965486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 168
Target Start/End: Original strand, 41724250 - 41724290
Alignment:
Q  128 aaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||||||||||||| || ||||||||||||||||    
T  41724250 aaaataagctgaaaacaacttatggacatgtcataagttgt 41724290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 1816592 - 1816659
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 166  Q
    ||||||||||||||  || || |||||| ||||||||||||||||| | | |||| ||||||||||||    
T  1816592 ttttcataagctatactggagagcttatcaaaataagctgaaaacagcctatgaaaatgtcataagtt 1816659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 13413920 - 13413979
Alignment:
Q  80 ataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctga 139  Q
    |||||||||| ||||  | ||||||||||||||||||||  |||||| ||||||||||||    
T  13413920 ataaaataaatttaagctgttttcataagctatcttgaacagcttatcaaaataagctga 13413979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 25453922 - 25453863
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacat 156  Q
    ||||||||||| ||||| || |  |||||||||||||||||||||| | |||||||||||    
T  25453922 tattttcataaactatcctggaaagcttatgaaaataagctgaaaagagcttgtgaacat 25453863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 148
Target Start/End: Complemental strand, 34414847 - 34414796
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    ||||||||||| ||||| || || | ||||||||||||||||||||||||||    
T  34414847 tattttcataaactatcatggagagtttatgaaaataagctgaaaacaactt 34414796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 164
Target Start/End: Original strand, 36445856 - 36445899
Alignment:
Q  121 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||||| |||||||||||  |||||||||||||||    
T  36445856 gcttatgaaaataagatgaaaacaactaatgaacatgtcataag 36445899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 168
Target Start/End: Original strand, 43115087 - 43115134
Alignment:
Q  121 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||| ||||||||||||||||| || || ||||||||||||||||    
T  43115087 gcttatggaaataagctgaaaacaagttatggacatgtcataagttgt 43115134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 51130759 - 51130822
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcata 162  Q
    ||||||||||||||| || || |||  |||||||||||||||| |||||| || ||||||||||    
T  51130759 ttttcataagctatcatggagagctattgaaaataagctgaaagcaacttatggacatgtcata 51130822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 5391911 - 5391953
Alignment:
Q  122 cttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||||||||||| |||||||| ||| |||||||||||||||    
T  5391911 cttatgaaaataagttgaaaacagcttatgaacatgtcataag 5391953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 5396229 - 5396271
Alignment:
Q  122 cttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||||||||||||| ||| | |||||||||||||    
T  5396229 cttatgaaaataagctgaaaacaccttattaacatgtcataag 5396271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 164
Target Start/End: Complemental strand, 39723278 - 39723236
Alignment:
Q  122 cttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||    
T  39723278 cttatgagaataagctgaaaacagcttatgaacatgtcataag 39723236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 41633369 - 41633415
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaa 145  Q
    ||||||| |||||| ||| || |||||||||||||||||||||||||    
T  41633369 ttttcatcagctattttggagagcttatgaaaataagctgaaaacaa 41633415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 49465826 - 49465780
Alignment:
Q  27 tttatagcataaacatttatcatgaaaaacgcctatgtgtaagctat 73  Q
    |||||||||||| || ||||||||| |||||| ||||||||||||||    
T  49465826 tttatagcataatcacttatcatgagaaacgcttatgtgtaagctat 49465780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 1217861 - 1217796
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||||| |  ||  ||||||||| |||| |||||||||||| || ||||||||||||    
T  1217861 ttttcataagctatccttgagaacttatgaaagtaagatgaaaacaacttatggacatgtcataag 1217796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 14145918 - 14145959
Alignment:
Q  96 ttattttcataagctatcttgaagtgcttatgaaaataagct 137  Q
    ||||||||||||||||||||| | | ||||||||||||||||    
T  14145918 ttattttcataagctatcttggattacttatgaaaataagct 14145959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 20170769 - 20170720
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    ||||| |||||||||||| || ||||||| ||||||||| ||||||||||    
T  20170769 ttttcctaagctatcttgtagagcttatgcaaataagctaaaaacaactt 20170720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 21574499 - 21574568
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||| |||||||| | || || ||||||| ||||||||| ||| || ||| |||||||||||||||||||    
T  21574499 tttttataagctaacatggagagcttatggaaataagctaaaagcagcttatgaacatgtcataagttgt 21574568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 34382951 - 34383000
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    ||||||||||||||| ||||  ||||| ||||||||| ||||||||||||    
T  34382951 ttttcataagctatcctgaaaagcttaagaaaataagatgaaaacaactt 34383000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 164
Target Start/End: Complemental strand, 34610866 - 34610801
Alignment:
Q  100 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataag 164  Q
    |||||||||||||||||  |  ||||||||||| |||||||||| |||| ||||| ||||||||||    
T  34610866 tttcataagctatcttggcgaacttatgaaaatcagctgaaaaccacttatgaacaatgtcataag 34610801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 34954113 - 34954154
Alignment:
Q  121 gcttatgaaaataagctgaaaacaacttgtgaacatgtcata 162  Q
    |||||||||||||||||||||||| ||  |||||||||||||    
T  34954113 gcttatgaaaataagctgaaaacagctcatgaacatgtcata 34954154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 41671320 - 41671381
Alignment:
Q  100 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcat 161  Q
    |||||||||||||||||||    ||||||||||||| |||||||||||| |  |||||||||    
T  41671320 tttcataagctatcttgaaaaatttatgaaaataagttgaaaacaacttatagacatgtcat 41671381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 46407975 - 46407906
Alignment:
Q  79 gataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    |||||| |||||||||| | ||||||||||||||  ||| | |||| ||||||||||||  |||||||||    
T  46407975 gataaagtaaagttaaactgttttcataagctattgtgatgagcttgtgaaaataagctagaaacaactt 46407906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 54180841 - 54180776
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||||  || || ||||||  ||||||||| |||||||||| || ||||||||||||    
T  54180841 ttttcataagctattatggagagcttatataaataagctaaaaacaacttatggacatgtcataag 54180776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 168
Target Start/End: Complemental strand, 482852 - 482784
Alignment:
Q  100 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||| ||||||||||| | ||||| |||||||||||||| | | | ||| ||||| |||||||||    
T  482852 tttcataaactatcttgaagagtttatggaaataagctgaaaatatcatatgagcatgttataagttgt 482784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 2071065 - 2071109
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaac 143  Q
    ||||||||||||||  ||||| ||||||||||||||||| |||||    
T  2071065 ttttcataagctatgatgaagagcttatgaaaataagctaaaaac 2071109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 2128319 - 2128255
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    ||||||||||| |||||  ||  | ||||||||||||||||||||| ||| ||||||||| ||||    
T  2128319 ttttcataagccatcttttagaacgtatgaaaataagctgaaaacagcttatgaacatgttataa 2128255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 5166343 - 5166395
Alignment:
Q  110 tatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcata 162  Q
    |||||| ||| || |||||||||||| |||||||| ||| |||||||||||||    
T  5166343 tatcttcaagagcgtatgaaaataagatgaaaacagcttatgaacatgtcata 5166395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 11040656 - 11040612
Alignment:
Q  118 agtgcttatgaaaataagctgaaaacaacttgtgaacatgtcata 162  Q
    |||| |||||||||||||| ||||||||||| || ||||||||||    
T  11040656 agtgtttatgaaaataagccgaaaacaacttatggacatgtcata 11040612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 20195077 - 20195030
Alignment:
Q  115 tgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    ||||| ||||||||||| |||||||||||||||| |||| |||||||||    
T  20195077 tgaagagcttatgaaaa-aagctgaaaacaacttttgaatatgtcataa 20195030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 21862233 - 21862177
Alignment:
Q  102 tcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgt 158  Q
    |||| |||||||| | || ||||||| |||||||||||||||||||| || ||||||    
T  21862233 tcattagctatctgggagagcttatggaaataagctgaaaacaacttatggacatgt 21862177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 23793594 - 23793642
Alignment:
Q  100 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    ||||||||||||||||| |  ||||||  ||||||||||||||||||||    
T  23793594 tttcataagctatcttggaaagcttatagaaataagctgaaaacaactt 23793642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 155
Target Start/End: Complemental strand, 25447305 - 25447250
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaaca 155  Q
    |||||||||||||||||||  | ||||||| || |||||||||||| ||||||||||    
T  25447305 ttttcataagctatcttgattt-cttatgagaaaaagctgaaaacagcttgtgaaca 25447250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 33405228 - 33405160
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaa-ataagctgaaaacaacttgtgaacatgtcataagtt 166  Q
    |||||||||||||||||||||  |||||||||  ||||| |||||||  || ||||||| |||||||||    
T  33405228 ttttcataagctatcttgaagaacttatgaaagttaagccgaaaacagtttatgaacatatcataagtt 33405160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 37138296 - 37138344
Alignment:
Q  96 ttattttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 144  Q
    ||||||||||||||||||||  || | ||| ||||||||||||||||||    
T  37138296 ttattttcataagctatcttagagagtttaggaaaataagctgaaaaca 37138344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 167
Target Start/End: Complemental strand, 48049043 - 48048975
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttg 167  Q
    ||||||| ||||||||||  | | ||||| |||||||||||||||| ||| || ||||||||| |||||    
T  48049043 ttttcattagctatcttggggaggttatggaaataagctgaaaacagcttatggacatgtcatgagttg 48048975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 50952347 - 50952407
Alignment:
Q  104 ataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||| |||||||| || ||||||| ||||||||| ||||||  || |||||||||||||||    
T  50952347 ataaactatcttggagagcttatggaaataagcttaaaacagtttatgaacatgtcataag 50952407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 6e-18; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 28300367 - 28300297
Alignment:
Q  92 taaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcata 162  Q
    |||| |||||||||| |||||||||||| ||||||||||||||| ||||||||||||  ||||||||||||    
T  28300367 taaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 28300297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 23819098 - 23819163
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||||||||||| ||||||  ||||||| |||||||||||| || ||||||||||||    
T  23819098 ttttcataagctatcttgaagagcttatagaaataagatgaaaacaacttatggacatgtcataag 23819163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 47800632 - 47800676
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaac 143  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  47800632 ttttcataagctatcttgaagagcttatgaaaataagctgaaaac 47800676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 2996582 - 2996651
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||||||||| || || |||||||||||| |||||| | ||| || ||||||||||||||||    
T  2996582 ttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggacatgtcataagttgt 2996651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 4471177 - 4471246
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||||||||||||  |||| |||||||||| |||| ||||||| || | ||||||||||||||    
T  4471177 ttttcataagctatcttgaaaagcttctgaaaataagttgaatacaacttatggatatgtcataagttgt 4471246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 17884077 - 17884134
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacat 156  Q
    |||||||||||||| ||| || |||||||||||| ||||||||||||||| |||||||    
T  17884077 ttttcataagctatattggagagcttatgaaaattagctgaaaacaacttatgaacat 17884134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 21043316 - 21043231
Alignment:
Q  79 gataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||| || ||||||| | ||||||||||||||| ||||| || ||||||||||  ||||||||| ||| ||||| |||||||||    
T  21043316 gataaattatagttaaactgttttcataagctatcctgaagagcatatgaaaatacactgaaaacagcttatgaacgtgtcataag 21043231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 29263379 - 29263444
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||||| || || |||| || |||||||||||||||||||| ||||||| |||||||    
T  29263379 ttttcataagctatcctgcagagcttgtggaaataagctgaaaacaacttatgaacatatcataag 29263444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 47145971 - 47146028
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacat 156  Q
    ||||||||| || |||||||| ||||||||||||||| |||||||||||| |||||||    
T  47145971 ttttcataaactgtcttgaagagcttatgaaaataaggtgaaaacaacttatgaacat 47146028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 52746901 - 52746836
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||||||||||||||| |  |||||||||||| ||||||||||| ||| |||||||||| ||||    
T  52746901 ttttcataagctatcttgtaaggcttatgaaaatcagctgaaaacagcttatgaacatgtcttaag 52746836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 53673719 - 53673670
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    |||||||||||||||||| || ||||||| ||||||||||||||||||||    
T  53673719 ttttcataagctatcttggagagcttatgtaaataagctgaaaacaactt 53673670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 143
Target Start/End: Original strand, 4500836 - 4500899
Alignment:
Q  80 ataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaac 143  Q
    |||||| ||||||||||| |||||| ||||||| ||| || | |||||||||||||||||||||    
T  4500836 ataaaacaaagttaaattgttttcaaaagctattttggagagattatgaaaataagctgaaaac 4500899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 46019690 - 46019623
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 166  Q
    |||||||||| ||||  |||| ||||||||| ||||| |||||||||||| | |||||||||||||||    
T  46019690 ttttcataagttatcccgaagagcttatgaatataagttgaaaacaacttatcaacatgtcataagtt 46019623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 51630118 - 51630165
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 144  Q
    |||||||||||||||||||||||   ||||||||||||||||||||||    
T  51630118 tattttcataagctatcttgaagaatttatgaaaataagctgaaaaca 51630165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 7694071 - 7694009
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcat 161  Q
    |||||||||| |||| || || | ||||| |||||||||||||||||||| ||||||||||||    
T  7694071 ttttcataagttatcctggagagtttatggaaataagctgaaaacaacttatgaacatgtcat 7694009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 24747348 - 24747390
Alignment:
Q  119 gtgcttatgaaaataagctgaaaacaacttgtgaacatgtcat 161  Q
    |||| ||||||||||||||||||||||||| ||||||||||||    
T  24747348 gtgcatatgaaaataagctgaaaacaacttatgaacatgtcat 24747390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 160
Target Start/End: Complemental strand, 4798627 - 4798566
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtca 160  Q
    |||||||||||||||||| || ||||||| ||||||||| |||||| ||| || ||||||||    
T  4798627 ttttcataagctatcttggagagcttatgcaaataagctcaaaacagcttatgtacatgtca 4798566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 18011871 - 18011924
Alignment:
Q  90 gttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaac 143  Q
    |||||| | ||||||||||||||||||||| | ||||||||||||||| |||||    
T  18011871 gttaaactgttttcataagctatcttgaagagtttatgaaaataagctaaaaac 18011924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 18628604 - 18628555
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    |||||||||| ||||||| || ||||||| ||||||||||||||||||||    
T  18628604 ttttcataagttatcttggagagcttatggaaataagctgaaaacaactt 18628555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 35743271 - 35743356
Alignment:
Q  79 gataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||  ||| || |||||||| ||||| ||||| | ||||| ||||||| || ||||||||| | |||||||||||||    
T  35743271 gataaaataaaggcaaactactttcataaactatcatgaagagtttatggaaataagttggaaacaacttataaacatgtcataag 35743356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 40532655 - 40532586
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||| ||||| || || || ||||||||| |||||||||||| ||||||| | |||||||||    
T  40532655 ttttcataagctgtcttggagagcctacgaaaataagatgaaaacaacttatgaacatataataagttgt 40532586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 5131335 - 5131262
Alignment:
Q  79 gataaaataaagttaaattattttcat----aagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    ||||||||||||||||| | |||||||    |||||||| || || ||||||| ||||||||||||||||||||    
T  5131335 gataaaataaagttaaaatgttttcatgtaaaagctatcctggagagcttatggaaataagctgaaaacaactt 5131262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 164
Target Start/End: Original strand, 44249295 - 44249359
Alignment:
Q  100 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||||| |||||||| || | |||||||||||||||||| | ||||| | |||||||||||||    
T  44249295 tttcataaactatcttggagagtttatgaaaataagctgaagaaaacttatcaacatgtcataag 44249359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 164
Target Start/End: Original strand, 1137743 - 1137786
Alignment:
Q  121 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||| |||||| ||||||||||||| |||||||||||||||    
T  1137743 gcttatggaaataaactgaaaacaacttatgaacatgtcataag 1137786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 163
Target Start/End: Complemental strand, 8469413 - 8469374
Alignment:
Q  124 tatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    |||| |||||||||||||||||||| ||||||||||||||    
T  8469413 tatggaaataagctgaaaacaacttatgaacatgtcataa 8469374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 25548207 - 25548140
Alignment:
Q  81 taaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    |||||||||||||| || ||||||||| ||||   | || ||||||||||||||| ||||||||||||    
T  25548207 taaaataaagttaagttgttttcataaactatacagcagagcttatgaaaataagttgaaaacaactt 25548140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 42641702 - 42641635
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaa-ataagctg-aaaacaacttgtgaacatgtcataag 164  Q
    |||||||||||||| |||  | |||||||||| |||||||| |||||| |||||||||||||||||||    
T  42641702 ttttcataagctattttggtgagcttatgaaatataagctgcaaaacagcttgtgaacatgtcataag 42641635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 164
Target Start/End: Original strand, 43824314 - 43824357
Alignment:
Q  121 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||| |||||||||||||||||||| |||||||| ||||||    
T  43824314 gcttatggaaataagctgaaaacaacttatgaacatgccataag 43824357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 168
Target Start/End: Original strand, 46401303 - 46401342
Alignment:
Q  129 aaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||| ||||||| |||||||||||||||||||    
T  46401303 aaataagctgaatacaacttatgaacatgtcataagttgt 46401342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 158
Target Start/End: Complemental strand, 55084542 - 55084483
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgt 158  Q
    ||||||| |||||||||  || ||||||||||||||||||||| || ||| |||||||||    
T  55084542 ttttcatgagctatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 55084483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 165
Target Start/End: Complemental strand, 825551 - 825485
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagt 165  Q
    |||||||||||||| ||| ||  |||||||||||||||||||||||  |  ||| ||||||||||||    
T  825551 ttttcataagctattttggagaacttatgaaaataagctgaaaacagttaatgagcatgtcataagt 825485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 137
Target Start/End: Complemental strand, 2111111 - 2111073
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagct 137  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  2111111 ttttcataagctatcttgaaggacttatgaaaataagct 2111073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 4691880 - 4691926
Alignment:
Q  122 cttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||||||||||||||||| | ||  |||||||||||||||    
T  4691880 cttatgaaaataagctgaaaacaacatatgggcatgtcataagttgt 4691926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 137
Target Start/End: Original strand, 29778804 - 29778842
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagct 137  Q
    ||||||||||||| ||||||| |||||||||||||||||    
T  29778804 ttttcataagctaccttgaagagcttatgaaaataagct 29778842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 30631248 - 30631290
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaa 141  Q
    ||||||| | |||||| ||||||||||||||||||||||||||    
T  30631248 ttttcattacctatctggaagtgcttatgaaaataagctgaaa 30631290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 168
Target Start/End: Original strand, 53155265 - 53155338
Alignment:
Q  92 taaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||| ||||||||||||||||| ||||   ||| |||||||||||||||| ||| || |  ||||||||||||||||    
T  53155265 taaactattttcataagctatcatgaa---cttgtgaaaataagctgaaagcaatttatagacatgtcataagttgt 53155338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 3155612 - 3155657
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 144  Q
    ||||||||| |||||||||||  || ||||||||||||||||||||    
T  3155612 ttttcataaactatcttgaagaactaatgaaaataagctgaaaaca 3155657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 144
Target Start/End: Original strand, 14011247 - 14011288
Alignment:
Q  103 cataagctatcttgaagtgcttatgaaaataagctgaaaaca 144  Q
    |||||||||||||| || ||||||| ||||||||||||||||    
T  14011247 cataagctatcttggagagcttatggaaataagctgaaaaca 14011288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 142
Target Start/End: Complemental strand, 30377470 - 30377433
Alignment:
Q  105 taagctatcttgaagtgcttatgaaaataagctgaaaa 142  Q
    |||||||||||| || ||||||||||||||||||||||    
T  30377470 taagctatcttggagagcttatgaaaataagctgaaaa 30377433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 35290248 - 35290203
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 144  Q
    ||||||||||||||||| ||| |||||  |||||||||||||||||    
T  35290248 ttttcataagctatctttaagagcttactaaaataagctgaaaaca 35290203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 42461282 - 42461323
Alignment:
Q  121 gcttatgaaaataagctgaaaacaacttgtgaacatgtcata 162  Q
    ||||||||||||||||||||| |||||| |||||| ||||||    
T  42461282 gcttatgaaaataagctgaaatcaacttatgaacacgtcata 42461323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 43932437 - 43932506
Alignment:
Q  92 taaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcat 161  Q
    |||| |||||||||||| |||  |||||  ||| |||||||||| |||||||||||| || |||||||||    
T  43932437 taaactattttcataagttattctgaagaacttgtgaaaataagatgaaaacaacttatggacatgtcat 43932506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 166
Target Start/End: Original strand, 46201387 - 46201424
Alignment:
Q  129 aaataagctgaaaacaacttgtgaacatgtcataagtt 166  Q
    |||||||||||||||||| | |||||||||||||||||    
T  46201387 aaataagctgaaaacaacctatgaacatgtcataagtt 46201424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 46415853 - 46415784
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||||||| |  || |||||  ||||| ||||||||||||||| || |||||||||| |||||    
T  46415853 ttttcataagctatcctcgagagcttagtaaaattagctgaaaacaacttatggacatgtcataggttgt 46415784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 146
Target Start/End: Complemental strand, 47119024 - 47118979
Alignment:
Q  101 ttcataagctatcttgaagtgcttatgaaaataagctgaaaacaac 146  Q
    |||||| ||||||||||||  |||||||| ||||||||||||||||    
T  47119024 ttcatatgctatcttgaagaacttatgaagataagctgaaaacaac 47118979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 49219148 - 49219197
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    ||||||||| ||||||| ||| | ||||| ||||||||||||||||||||    
T  49219148 ttttcataaactatcttaaagagattatggaaataagctgaaaacaactt 49219197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 52735131 - 52735195
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||| ||||||||||||||| ||||||| ||||||||| |||| ||| | || ||||||||||||    
T  52735131 ttttcgtaagctatcttgaagagcttatggaaataagct-aaaataacatatggacatgtcataag 52735195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 168
Target Start/End: Complemental strand, 488186 - 488118
Alignment:
Q  100 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||||||||| ||   ||| | ||||||| |||||||| ||| || ||||||||||||||||    
T  488186 tttcataagctatcttggagaatttacgtaaataagatgaaaacagcttatgcacatgtcataagttgt 488118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 2592365 - 2592321
Alignment:
Q  104 ataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    ||||||||| ||| || ||||||| ||||||||||||||||||||    
T  2592365 ataagctattttggagagcttatggaaataagctgaaaacaactt 2592321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 168
Target Start/End: Complemental strand, 2874684 - 2874616
Alignment:
Q  100 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||||||  | |||||||||| |||||||| ||||| |  || || ||||||||||||||||    
T  2874684 tttcataagctatccaggagtgcttatggaaataagcggaaaatagattatggacatgtcataagttgt 2874616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 144
Target Start/End: Complemental strand, 17751200 - 17751160
Alignment:
Q  104 ataagctatcttgaagtgcttatgaaaataagctgaaaaca 144  Q
    ||||||||||||| || ||||||||||||||||| ||||||    
T  17751200 ataagctatcttgcagagcttatgaaaataagcttaaaaca 17751160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 167
Target Start/End: Original strand, 19250555 - 19250623
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttg 167  Q
    |||| ||||| |||||||||| || ||| |||||||| ||||| || ||| || |||||||||||||||    
T  19250555 tttttataagttatcttgaagagcatataaaaataagttgaaatcagcttatggacatgtcataagttg 19250623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 48719428 - 48719388
Alignment:
Q  123 ttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    |||||||||||||||||||||| |||  |||||||||||||    
T  48719428 ttatgaaaataagctgaaaacagcttacgaacatgtcataa 48719388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 168
Target Start/End: Complemental strand, 50569369 - 50569321
Alignment:
Q  121 gcttatgaaaataagctgaaaac-aacttgtgaacatgtcataagttgt 168  Q
    |||||||| |||||||||||||| ||||| |||| ||||||||||||||    
T  50569369 gcttatgacaataagctgaaaacaaacttatgaaaatgtcataagttgt 50569321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 53792585 - 53792629
Alignment:
Q  104 ataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    |||| |||||||| || | ||||||||||||||||||||||||||    
T  53792585 ataaactatcttggagagtttatgaaaataagctgaaaacaactt 53792629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 70)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 35379077 - 35379015
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcat 161  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||| |||||| |||||    
T  35379077 ttttcataagctatcttggagagcttatgaaaataagctgaaaacaacttatgaacaagtcat 35379015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 44443328 - 44443394
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    |||||||||||||||||||  || || ||||||||||||||||||||||||| ||||||| ||||||    
T  44443328 tattttcataagctatctttgagagcatatgaaaataagctgaaaacaacttatgaacatttcataa 44443394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 14666557 - 14666626
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||| |||||||||||   |||||||||||||||| |||||||||| | |||||||||||||||||||    
T  14666557 ttttcacaagctatcttggtatgcttatgaaaataaggtgaaaacaacctatgaacatgtcataagttgt 14666626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 34652097 - 34652028
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||||||||| || ||||||| ||||||| |||||||| ||| || ||||||||||||||||    
T  34652097 ttttcataagctatcttggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgt 34652028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 43199841 - 43199776
Alignment:
Q  103 cataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||||| || |||||||||| ||||||||||||||||| | ||||||||| |||||||    
T  43199841 cataagctatcttggagggcttatgaaattaagctgaaaacaacttataaacatgtcacaagttgt 43199776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 164
Target Start/End: Original strand, 680510 - 680577
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||||||||||||||||||||  ||| |||||||||||||||||||  || | |||||||||||||    
T  680510 tattttcataagctatcttgaagaacttgtgaaaataagctgaaaacagtttataaacatgtcataag 680577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 93 - 164
Target Start/End: Complemental strand, 12313240 - 12313169
Alignment:
Q  93 aaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||| ||| |||||||||||||| || ||||||||||||||| ||||| |||||| |||||||| ||||||    
T  12313240 aaattgtttacataagctatcttggagagcttatgaaaataaggtgaaatcaacttatgaacatggcataag 12313169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 43911060 - 43910993
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 166  Q
    |||||| ||||||||||| |  |||| ||| ||||||||||||||||||| |||||||||||||||||    
T  43911060 ttttcaaaagctatcttggaaagcttgtgataataagctgaaaacaacttatgaacatgtcataagtt 43910993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 142
Target Start/End: Complemental strand, 43985064 - 43985021
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaa 142  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  43985064 ttttcataagctatcttgaagagcttatgaaaataagctgaaaa 43985021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 9174824 - 9174894
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataagttgt 168  Q
    |||||||||||||||||  || |||||||||||||||||||||| | ||| ||||| ||||||||||||||    
T  9174824 ttttcataagctatcttacagagcttatgaaaataagctgaaaatagcttatgaacaatgtcataagttgt 9174894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 142
Target Start/End: Original strand, 9595260 - 9595310
Alignment:
Q  92 taaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaa 142  Q
    |||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  9595260 taaattattttcataaactatcttaaaatgcttatgaaaataagctgaaaa 9595310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 1056190 - 1056121
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||| ||||| || || || ||||||||||| |||||||||||||||  |||||||||||||||||||    
T  1056190 ttttcacaagctctcatgtagagcttatgaaaacaagctgaaaacaactaatgaacatgtcataagttgt 1056121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 145
Target Start/End: Complemental strand, 3227763 - 3227698
Alignment:
Q  80 ataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaa 145  Q
    |||||| ||||||||||| |||||||||||||| ||| || | || ||||||||||||||||||||    
T  3227763 ataaaacaaagttaaattgttttcataagctattttggagagattttgaaaataagctgaaaacaa 3227698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 29316836 - 29316771
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||| |||||||||| ||  |||||| |||||||||||||| ||||| |||||||||||||||    
T  29316836 ttttcatcagctatcttggagaacttatggaaataagctgaaaagaacttatgaacatgtcataag 29316771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 16867748 - 16867812
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    |||||| ||||||||||| || ||||||| ||||||| |||||||||||| |||| |||||||||    
T  16867748 ttttcacaagctatcttggagagcttatggaaataagttgaaaacaacttatgaatatgtcataa 16867812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 168
Target Start/End: Original strand, 15120186 - 15120261
Alignment:
Q  93 aaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||| ||||| ||||||||| || || |||||| |||||||||| |||||| ||  |||||||||||||||||||    
T  15120186 aaattgttttcgtaagctatcatggagagcttatcaaaataagcttaaaacagctaatgaacatgtcataagttgt 15120261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 168
Target Start/End: Complemental strand, 41809284 - 41809237
Alignment:
Q  121 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||| ||||||||| |||||||||| |||||||||||||||||||    
T  41809284 gcttatggaaataagctaaaaacaacttatgaacatgtcataagttgt 41809237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 164
Target Start/End: Original strand, 41817175 - 41817242
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||| ||||| || || ||||||| ||||||||||||||||| || | |||||||||||||    
T  41817175 tattttcataaactatcctggagagcttatggaaataagctgaaaacaaattatcaacatgtcataag 41817242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 26143701 - 26143631
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataagttgt 168  Q
    ||||||||||||| |||| ||  ||||||||||||||||||||| ||| ||||||| ||| ||||||||||    
T  26143701 ttttcataagctaacttggagaacttatgaaaataagctgaaaataacctgtgaacaatgacataagttgt 26143631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 33942159 - 33942229
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgtc 169  Q
    ||||||||||| ||| |  || ||| |||||||| ||||||||||| ||| ||||||||||||||||||||    
T  33942159 ttttcataagccatcatagagagctaatgaaaattagctgaaaacagcttatgaacatgtcataagttgtc 33942229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 38078471 - 38078413
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatg 157  Q
    |||||||||||||||||| || ||||||| |||| |||| |||||||||| ||||||||    
T  38078471 ttttcataagctatcttggagagcttatgtaaatgagctcaaaacaacttatgaacatg 38078413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 44606148 - 44606102
Alignment:
Q  122 cttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||| ||||||||||||||| || ||||||||||||||||    
T  44606148 cttatgaaaatcagctgaaaacaacttatggacatgtcataagttgt 44606102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 1939393 - 1939324
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||||||  || || ||||||| ||||||| |||||||| ||| || ||||||||||||||||    
T  1939393 ttttcataagctatactggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgt 1939324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 3067449 - 3067396
Alignment:
Q  90 gttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaac 143  Q
    |||||| | ||||||||||||||||||||| | ||||||||||||||| |||||    
T  3067449 gttaaactgttttcataagctatcttgaagagtttatgaaaataagctaaaaac 3067396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 7871652 - 7871717
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||||||||| | |||||| ||||||| |||||||||||||||| ||| ||| ||| |||||||    
T  7871652 ttttcataagctcttttgaagagcttatggaaataagctgaaaacaccttatgatcatatcataag 7871717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 8017443 - 8017508
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||||||||||||||| ||  |||||||||||| || |||||||| || ||||||| |||||||    
T  8017443 ttttcataagctatcttggagaacttatgaaaatacgcagaaaacaaattatgaacatatcataag 8017508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 162
Target Start/End: Complemental strand, 9530791 - 9530726
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcata 162  Q
    ||||||||||||||||| || || |||||||||| |||||| |||| ||||| || ||||||||||    
T  9530791 tattttcataagctatcctggagagcttatgaaagtaagctaaaaataacttatggacatgtcata 9530726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 32821818 - 32821887
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||||||| | ||| ||||||  |||||| ||||||||| ||| || ||||||||||||||||    
T  32821818 ttttcataagctatcctaaagagcttatagaaataaactgaaaacagcttatggacatgtcataagttgt 32821887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 33941918 - 33941987
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||||||||| || | |||||| |||||| ||||| || ||| ||||| |||||||||||||    
T  33941918 ttttcataagctatcttggagagtttatgataataagttgaaagcagcttatgaacttgtcataagttgt 33941987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 43065511 - 43065442
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||| |||| || || ||||||  ||||||||||||||||| || || ||||||||||||||||    
T  43065511 ttttcataagttatcgtggagagcttattgaaataagctgaaaacaatttatggacatgtcataagttgt 43065442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 43141880 - 43141949
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||||||| ||||| | ||||| ||||||  |||||||||||| ||  |||||||||||||||    
T  43141880 ttttcataagctatcctgaagagtttatggaaataaaatgaaaacaacttatgggcatgtcataagttgt 43141949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 656837 - 656789
Alignment:
Q  100 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    ||||||||||||||||| || ||||||||||||||| ||||||| ||||    
T  656837 tttcataagctatcttgcagagcttatgaaaataagatgaaaactactt 656789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 1893335 - 1893275
Alignment:
Q  106 aagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 166  Q
    ||||||||||| ||  ||| ||||||||||||||||| ||||| || ||||||||||||||    
T  1893335 aagctatcttggagaacttgtgaaaataagctgaaaataacttatgtacatgtcataagtt 1893275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 12147488 - 12147544
Alignment:
Q  121 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgtccaaaataa 177  Q
    |||||||||||||| |||||||||| || ||||||||||||||| | ||| ||||||    
T  12147488 gcttatgaaaataaactgaaaacaatttatgaacatgtcataagctatcccaaataa 12147544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 12464536 - 12464480
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaa 153  Q
    |||||||||||||||||||| ||  ||| ||||||||||||||||| | ||||||||    
T  12464536 tattttcataagctatcttggagaacttgtgaaaataagctgaaaaaagcttgtgaa 12464480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 167
Target Start/End: Original strand, 35485926 - 35485994
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttg 167  Q
    |||| |||||||||| ||||| || |||| |||| ||||||||||| ||| ||||||| ||||||||||    
T  35485926 tttttataagctatcctgaagagcctatggaaatgagctgaaaacagcttatgaacatatcataagttg 35485994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 142
Target Start/End: Original strand, 1810673 - 1810716
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaa 142  Q
    |||| |||||||||||||||| | ||||||||||||||||||||    
T  1810673 tttttataagctatcttgaagagtttatgaaaataagctgaaaa 1810716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 155
Target Start/End: Complemental strand, 7928351 - 7928304
Alignment:
Q  108 gctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaaca 155  Q
    ||||||||| ||  ||||||||||||||||||||||||||| ||||||    
T  7928351 gctatcttggagaacttatgaaaataagctgaaaacaacttatgaaca 7928304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 160
Target Start/End: Complemental strand, 8820331 - 8820292
Alignment:
Q  121 gcttatgaaaataagctgaaaacaacttgtgaacatgtca 160  Q
    ||||||| |||||||||||||||| |||||||||||||||    
T  8820331 gcttatggaaataagctgaaaacagcttgtgaacatgtca 8820292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 10563619 - 10563556
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcata 162  Q
    ||||||||||||||  ||||| ||||| |||||||||||||||| | ||| || ||||||||||    
T  10563619 ttttcataagctatgctgaagagcttaagaaaataagctgaaaatagcttatggacatgtcata 10563556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 148
Target Start/End: Original strand, 12464679 - 12464722
Alignment:
Q  105 taagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    |||||||||||||||  |||||||||||||||||| ||||||||    
T  12464679 taagctatcttgaagaacttatgaaaataagctgagaacaactt 12464722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 168
Target Start/End: Complemental strand, 30538204 - 30538165
Alignment:
Q  129 aaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||||||||||| || ||||||||||||||||    
T  30538204 aaataagctgaaaacaacttatggacatgtcataagttgt 30538165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 135
Target Start/End: Complemental strand, 36863693 - 36863650
Alignment:
Q  92 taaattattttcataagctatcttgaagtgcttatgaaaataag 135  Q
    |||||| |||||||||||||||||| || |||||||||||||||    
T  36863693 taaattgttttcataagctatcttggagagcttatgaaaataag 36863650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 164
Target Start/End: Original strand, 42420004 - 42420071
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||||||| || |  ||||||| |||| |||||||||||| || |||||||| ||||||    
T  42420004 tattttcataagctatcctggatagcttatggaaatgagctgaaaacaatttatgaacatgacataag 42420071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 1625909 - 1625975
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaaca-tgtcataag 164  Q
    |||||||||||||||||| ||  |||| |||||| ||||||||||| ||| |||||| |||||||||    
T  1625909 ttttcataagctatcttggagaacttacgaaaatcagctgaaaacatcttatgaacattgtcataag 1625975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 7282988 - 7283074
Alignment:
Q  82 aaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||| |||| ||| | |||||||||||||| | | || ||||||| | ||||| |||||||||||| || |||| |||||||||||    
T  7282988 aaaatgaagtcaaactgttttcataagctatgtgggagagcttatggatataagatgaaaacaacttatggacatatcataagttgt 7283074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 11063519 - 11063561
Alignment:
Q  121 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    ||||||||||||||||| |||||||||| || |||||||||||    
T  11063519 gcttatgaaaataagctaaaaacaacttatggacatgtcataa 11063561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 15977994 - 15978040
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaa 145  Q
    |||||||||||||| ||| || | |||||||||||||||||||||||    
T  15977994 ttttcataagctattttggagagattatgaaaataagctgaaaacaa 15978040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 26626882 - 26626948
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataag 164  Q
    |||||||||||||||||| ||  ||||||||||||| |||||||||  || ||||| ||||||||||    
T  26626882 ttttcataagctatcttgcagaacttatgaaaataacctgaaaacagattatgaacaatgtcataag 26626948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 35378593 - 35378531
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcat 161  Q
    ||||| ||||| |||||| |  |||||||||||||||||||||| ||||| |||||| |||||    
T  35378593 ttttcgtaagcaatcttggatagcttatgaaaataagctgaaaataacttatgaacaagtcat 35378531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 35993451 - 35993377
Alignment:
Q  89 agttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    ||||||||| ||| ||||||||||| |  ||  |||||||||||||||||||||||| || || ||| |||||||    
T  35993451 agttaaattgtttgcataagctatcatagagaacttatgaaaataagctgaaaacaatttatggacacgtcataa 35993377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 40682455 - 40682390
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataag 164  Q
    |||||||||| |||||||| |  |||||||||||||| |||||||||||| ||||| ||||||||||    
T  40682455 ttttcataagatatcttga-gaacttatgaaaataagttgaaaacaacttatgaacaatgtcataag 40682390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 41144202 - 41144284
Alignment:
Q  82 aaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||||||  ||||| ||||||||||||| |||| || | || || ||||||||| |||||||||| |  ||||||||||||    
T  41144202 aaaataaagacaaattgttttcataagctaacttggagagtttctggaaataagctaaaaacaacttattgacatgtcataag 41144284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 44590043 - 44590089
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaa 145  Q
    |||||||||||||||||||||  ||| ||| ||||||||||||||||    
T  44590043 ttttcataagctatcttgaagaacttgtgagaataagctgaaaacaa 44590089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 1056416 - 1056371
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaa 142  Q
    ||||||||||||||||||||||| | ||||  ||||||||||||||    
T  1056416 tattttcataagctatcttgaagagtttatagaaataagctgaaaa 1056371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 8187514 - 8187445
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||||| | || || | ||||| |||||| |||||||||||||| ||| || |||||||||||    
T  8187514 ttttcataagctaccatggagagattatggaaataacctgaaaacaacttgcgaaaatttcataagttgt 8187445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 168
Target Start/End: Original strand, 11488287 - 11488353
Alignment:
Q  100 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||||| || || | ||||| |||||||||||||||||||| ||| ||  |||||||||||    
T  11488287 tttcataagctatcctggagagattatgcaaataagctgaaaacaacttatgacca--tcataagttgt 11488353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 169
Target Start/End: Original strand, 16398121 - 16398194
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataagttgtc 169  Q
    |||||||||||| ||| ||| ||  ||||||||||||||||||||||| |||  || | |||||||||||||||    
T  16398121 tattttcataagttatgttggagaacttatgaaaataagctgaaaacagcttacgagcaatgtcataagttgtc 16398194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 160
Target Start/End: Complemental strand, 19333386 - 19333325
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtca 160  Q
    ||||| ||| |||| ||| || ||||||||||||||||||| |||| ||| |||||||||||    
T  19333386 ttttcttaaactatattggagagcttatgaaaataagctgagaacagcttatgaacatgtca 19333325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 168
Target Start/End: Complemental strand, 30552712 - 30552635
Alignment:
Q  92 taaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaa-caacttgtgaacatgtcataagttgt 168  Q
    |||||||||||||||| ||||| |  || ||||||| ||||||||| |||| |||||| |  ||||||||||||||||    
T  30552712 taaattattttcataaactatcctagagagcttatggaaataagctaaaaaccaacttattgacatgtcataagttgt 30552635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 168
Target Start/End: Complemental strand, 32614985 - 32614940
Alignment:
Q  123 ttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||| ||||| ||||||||||| | |||||||||||||||||||    
T  32614985 ttatgagaataatctgaaaacaacatatgaacatgtcataagttgt 32614940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 33256749 - 33256814
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||| ||| |||||  | |||||||||||||||| ||||  || |||||||||||||||    
T  33256749 ttttcataagccatcctgaagaccgtatgaaaataagctgagaacagtttatgaacatgtcataag 33256814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 36415734 - 36415666
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||||||| || ||  |||| ||||||||| |||||||||||| || |||||| |||||||||    
T  36415734 ttttcataagctatcatgtagaacttacgaaaataagatgaaaacaacttatgcacatgt-ataagttgt 36415666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 40158727 - 40158792
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||||||| |||  || || ||||||| || ||||||||||||||||| | |||||||||||||    
T  40158727 ttttcataagttattctggagagcttatgtaattaagctgaaaacaacttataaacatgtcataag 40158792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 42817437 - 42817368
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||||||  ||||| ||||||| || |||||| ||||||||||  ||||||| | ||||||||    
T  42817437 ttttcataagctattctgaagagcttatggaagtaagctaaaaacaacttaagaacatgccgtaagttgt 42817368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 44644287 - 44644328
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaa 140  Q
    |||||| || ||||||||||| ||||||||||||||||||||    
T  44644287 ttttcaaaaactatcttgaagagcttatgaaaataagctgaa 44644328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 45314901 - 45314946
Alignment:
Q  123 ttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||| ||||||||||||| | || ||||||||||||||    
T  45314901 ttatgaaaataaactgaaaacaacttataaatatgtcataagttgt 45314946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 164
Target Start/End: Complemental strand, 6772584 - 6772516
Alignment:
Q  96 ttattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||| ||||| | || |||||||||| ||||||||||| | ||| |||  ||||||||||    
T  6772584 ttattttcataaggtatctaggagagcttatgaaagtaagctgaaaaaagcttatgattatgtcataag 6772516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 24097817 - 24097861
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaac 143  Q
    |||||||||| |||| || || |||||||||||||||||||||||    
T  24097817 ttttcataagttatcctggagagcttatgaaaataagctgaaaac 24097861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 43635159 - 43635095
Alignment:
Q  102 tcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 166  Q
    |||||||||||| ||||  ||||||||||||||||| |||||| |||    ||||||||||||||    
T  43635159 tcataagctatcatgaaaagcttatgaaaataagcttaaaacagcttacagacatgtcataagtt 43635095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 17258944 - 17258879
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||| ||||| ||||| |||||||||||||||||||||||| ||| |||||||||||||||    
T  17258944 ttttcataaactatcctgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcataag 17258879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 11707064 - 11707128
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    |||||||||||||||||| || |||| ||||||||||||||||||||||| | ||||||||||||    
T  11707064 ttttcataagctatcttgtagagcttttgaaaataagctgaaaacaacttataaacatgtcataa 11707128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 79 - 166
Target Start/End: Complemental strand, 12242791 - 12242704
Alignment:
Q  79 gataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 166  Q
    ||||||||| ||| ||||| |||||||||||||||||| || ||||||| || ||||||||||||||||  ||  |||||||||||||    
T  12242791 gataaaatagagtcaaattgttttcataagctatcttggagagcttatggaagtaagctgaaaacaactaatgttcatgtcataagtt 12242704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 168
Target Start/End: Complemental strand, 37611282 - 37611207
Alignment:
Q  93 aaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||| |||||||||||||||||| || ||||||| |||||| ||||||||| ||| ||||||||||| |||||||    
T  37611282 aaattgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgt 37611207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 168
Target Start/End: Complemental strand, 37788012 - 37787937
Alignment:
Q  93 aaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||| |||||||||||||||||| || ||||||| |||||| ||||||||| ||| ||||||||||| |||||||    
T  37788012 aaattgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgt 37787937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 168
Target Start/End: Complemental strand, 10125787 - 10125710
Alignment:
Q  91 ttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||| ||||||||||||| || | || || |||||||||||||||||||||||| ||| | |||||||||||||||||    
T  10125787 ttaagttattttcataagttaccatggagagcttatgaaaataagctgaaaacaccttatcaacatgtcataagttgt 10125710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 13604910 - 13604845
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||||||| |||||||||| ||||||||||||||| |||||||||| | || ||||||||||||    
T  13604910 ttttcataagttatcttgaagagcttatgaaaataagttgaaaacaacgtatggacatgtcataag 13604845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 36639531 - 36639596
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||||||||||| |||||||||||||||  ||||||||||| || ||| ||||||||    
T  36639531 ttttcataagctatcttgaagagcttatgaaaataagaggaaaacaacttatggacacgtcataag 36639596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 12460060 - 12459993
Alignment:
Q  101 ttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||| ||||||||||| || ||||||||||||||||  |||||||| | |||||||||||||||||||    
T  12460060 ttcacaagctatcttgcagagcttatgaaaataagccaaaaacaacatatgaacatgtcataagttgt 12459993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 7674657 - 7674726
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||||||||| ||   || ||||||||||||||||||| ||| | |||||||||||||||||    
T  7674657 ttttcataagctatcttggagaatttgtgaaaataagctgaaaacaccttataaacatgtcataagttgt 7674726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 10272492 - 10272423
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||| |||||| || | ||||||||||||||||||||||||||    ||||||||||||||||    
T  10272492 ttttcataagccatcttggagagtttatgaaaataagctgaaaacaacttacagacatgtcataagttgt 10272423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 17368685 - 17368754
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||||||||| || | ||||| |||||||||||||||  | | |||||||||||||||||||    
T  17368685 ttttcataagctatcttggagaggttatggaaataagctgaaaactgcatatgaacatgtcataagttgt 17368754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 155
Target Start/End: Complemental strand, 4014485 - 4014429
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaaca 155  Q
    |||||||||||||||||| ||  ||||||||||||||||||||||| ||| ||||||    
T  4014485 ttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttatgaaca 4014429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 12521542 - 12521602
Alignment:
Q  104 ataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||| |||||| ||||||| |||||||||||||||| ||| ||||||| |||||||    
T  12521542 ataagctattttgaagagcttatggaaataagctgaaaacagcttatgaacatatcataag 12521602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 32408660 - 32408588
Alignment:
Q  92 taaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||| ||||||||||||||||| ||||| ||||||| |||||||| |||| ||||||  | ||||||||||||    
T  32408660 taaactattttcataagctatcctgaagagcttatggaaataagcagaaaccaacttacggacatgtcataag 32408588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 33533600 - 33533536
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    |||||| ||||||||||| || ||||||| ||||||| |||||||||||| |||| |||||||||    
T  33533600 ttttcacaagctatcttggagagcttatggaaataagttgaaaacaacttatgaatatgtcataa 33533536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 168
Target Start/End: Original strand, 12467164 - 12467211
Alignment:
Q  121 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||||||||||||||| ||| | |||||||||||||||||    
T  12467164 gcttatgaaaataagctgaaaacagcttataaacatgtcataagttgt 12467211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 25461377 - 25461310
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 166  Q
    ||||||||| ||||||||  ||  |||||||||||||||||||||| ||  |||||||||||||||||    
T  25461377 ttttcataacctatcttggcgtatttatgaaaataagctgaaaacagctaatgaacatgtcataagtt 25461310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 166
Target Start/End: Original strand, 985600 - 985689
Alignment:
Q  79 gataaaataaagttaaattattttca--taagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 166  Q
    ||||||||||||| ||| | ||||||  ||||||||| ||||| |  |||| |||||||||||||||  |||||| ||||||||||||||    
T  985600 gataaaataaagtcaaactgttttcacataagctatcatgaagagactatggaaataagctgaaaaccgcttgtggacatgtcataagtt 985689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 9202809 - 9202743
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataag 164  Q
    |||||||||| ||||||||||  ||||||||||||||||| ||||| ||| ||||| ||||||||||    
T  9202809 ttttcataagttatcttgaagaacttatgaaaataagctggaaacagcttatgaacaatgtcataag 9202743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 499768 - 499727
Alignment:
Q  123 ttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||| |||||||||||||||||||||| |||||||||||||    
T  499768 ttatggaaataagctgaaaacaacttgttaacatgtcataag 499727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 2092606 - 2092537
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||| | ||||||||||| | ||||||||| ||| |||||||||||| || ||||| ||||||||||    
T  2092606 ttttcattaactatcttgaagggtttatgaaaaaaagttgaaaacaacttatggacatgccataagttgt 2092537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 2568667 - 2568732
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||||| || || ||| ||||||||||||| |||| ||||| |||| ||||||||||    
T  2568667 ttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatgaatatgtcataag 2568732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 7319069 - 7319020
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    |||||||||||||||||| ||  |||||||||||||||||| ||||||||    
T  7319069 ttttcataagctatcttggagaacttatgaaaataagctgagaacaactt 7319020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 8089957 - 8090014
Alignment:
Q  111 atcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||| |||||||||||||||||||||||| |||  ||| || |||||||||||    
T  8089957 atcttgaagagcttatgaaaataagctgaaaacagcttaggaatatatcataagttgt 8090014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 18543257 - 18543193
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||||| || || |||||||||| ||||||||||||||||  || ||||||||||||    
T  18543257 ttttcataagctatcctggagagcttatgaaa-taagctgaaaacaactcatggacatgtcataag 18543193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 18906351 - 18906400
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    ||||||||||||||||||||  ||||||  ||||||||||||||||||||    
T  18906351 ttttcataagctatcttgaaaagcttatcgaaataagctgaaaacaactt 18906400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 21768258 - 21768193
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||||||| |||||||||| ||||| ||||||||| |||||||| | | || ||||||||||||    
T  21768258 ttttcataagttatcttgaagagcttacgaaaataagttgaaaacagcgtatggacatgtcataag 21768193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 26209474 - 26209409
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||||| ||||||| |||||  ||||| ||||||||| |||||| ||||| ||||||    
T  26209474 ttttcataagctatcatgaagtgtttatgcgaataatctgaaaacagcttgtggacatgccataag 26209409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 41957512 - 41957447
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||||| |  ||  |||||||||||||| |||||||||||| || ||||||||||||    
T  41957512 ttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatggacatgtcataag 41957447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 5284509 - 5284445
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 163  Q
    |||||||| |||||| ||||| ||| |||||||||||||||||| | ||| || |||||||||||    
T  5284509 ttttcataggctatcatgaagagctaatgaaaataagctgaaaaaagcttatggacatgtcataa 5284445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 155
Target Start/End: Original strand, 7984978 - 7985034
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaaca 155  Q
    |||||||||||||||||| ||   |||||||||||||||||||||| ||| ||||||    
T  7984978 ttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaaca 7985034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 38104917 - 38104869
Alignment:
Q  100 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    ||||||||||||||||  || ||||||| ||||||||||||||||||||    
T  38104917 tttcataagctatcttagagagcttatggaaataagctgaaaacaactt 38104869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 38829695 - 38829647
Alignment:
Q  101 ttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttg 149  Q
    ||||||||||||||||||| ||||||||||||| || ||||||| ||||    
T  38829695 ttcataagctatcttgaagagcttatgaaaatatgccgaaaacagcttg 38829647  T

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Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 153
Target Start/End: Original strand, 3237102 - 3237156
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaa 153  Q
    ||||||||||||||| | ||| ||||||||||||| |||||| ||||||| ||||    
T  3237102 ttttcataagctatcctaaagagcttatgaaaatatgctgaacacaacttatgaa 3237156  T

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Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 153
Target Start/End: Original strand, 7907890 - 7907944
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaa 153  Q
    |||| ||||||| ||||| || |||||||||| ||||||||||||||||| ||||    
T  7907890 ttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 7907944  T

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Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 32545046 - 32545108
Alignment:
Q  102 tcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||||||||||| || |||||||||||||| ||||||| |  ||||  ||||||||||||    
T  32545046 tcataagctatcttggagagcttatgaaaataatctgaaaatagattgtagacatgtcataag 32545108  T

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Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 39105473 - 39105539
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataag 164  Q
    |||||||||||||||||| ||  |||||||||||||||| |||| | ||| ||||| ||||||||||    
T  39105473 ttttcataagctatcttggagaacttatgaaaataagctaaaaatagcttatgaacaatgtcataag 39105539  T

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Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 1899187 - 1899228
Alignment:
Q  123 ttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||| |||||||||||||||||||| || ||||||||||||    
T  1899187 ttatggaaataagctgaaaacaacttatgcacatgtcataag 1899228  T

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Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 168
Target Start/End: Complemental strand, 11700415 - 11700370
Alignment:
Q  123 ttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||||||| ||||||||| ||| || ||||||||||||||||    
T  11700415 ttatgaaaataatctgaaaacagcttatggacatgtcataagttgt 11700370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 12425580 - 12425629
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    |||||| ||||||||||| ||  |||||||||||||| ||||||||||||    
T  12425580 ttttcacaagctatcttggagaacttatgaaaataagttgaaaacaactt 12425629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 32172662 - 32172731
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||||||| |||||  || ||| ||||||||||||||   ||| || ||||||||||||||||    
T  32172662 ttttcataagctatcatgaagaactaatggaaataagctgaaaatggcttatggacatgtcataagttgt 32172731  T

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Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 32194134 - 32194073
Alignment:
Q  105 taagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 166  Q
    |||||||||||  || ||||||  |||||||||||||||||||| || | ||||||||||||    
T  32194134 taagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 32194073  T

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Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 32897466 - 32897535
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||| |||||||  ||| |||||||||||||||| |||||||  || |||| || |||||||||||    
T  32897466 ttttcatacgctatctcaaagagcttatgaaaataagcagaaaacaggttatgaaaatatcataagttgt 32897535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 35963272 - 35963313
Alignment:
Q  121 gcttatgaaaataagctgaaaacaacttgtgaacatgtcata 162  Q
    ||||||| |||||||||||||||||||| || ||||||||||    
T  35963272 gcttatggaaataagctgaaaacaacttatggacatgtcata 35963313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 36774788 - 36774703
Alignment:
Q  79 gataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    ||||||| ||||| ||| | |||| |||||||||| || || ||||||| ||||||||||||| || |||  | ||||||||||||    
T  36774788 gataaaacaaagtcaaactgtttttataagctatcctggagagcttatggaaataagctgaaaccatctttaggacatgtcataag 36774703  T

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Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 39594816 - 39594865
Alignment:
Q  99 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    |||||||||| |||||||  |  |||||||||||||||||||||||||||    
T  39594816 ttttcataagatatcttgttgaacttatgaaaataagctgaaaacaactt 39594865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 1465076 - 1465032
Alignment:
Q  104 ataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    ||||||||||||| ||  ||| |||||||||||||||||||||||    
T  1465076 ataagctatcttggaggacttgtgaaaataagctgaaaacaactt 1465032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 8177584 - 8177528
Alignment:
Q  108 gctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||||| || || |||||||||||||| ||||||||||||| || |||| |||||||    
T  8177584 gctatcctggagagcttatgaaaataacctgaaaacaacttatggacatatcataag 8177528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 161
Target Start/End: Original strand, 10303827 - 10303867
Alignment:
Q  121 gcttatgaaaataagctgaaaacaacttgtgaacatgtcat 161  Q
    ||||||||||||||||||| |||||||| || |||||||||    
T  10303827 gcttatgaaaataagctgacaacaacttatggacatgtcat 10303867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 13264172 - 13264101
Alignment:
Q  92 taaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 164  Q
    |||| |||||||| | |||||| ||||| |||||| ||||||||||||||||| ||| |||| ||| ||||||    
T  13264172 taaactattttcacatgctatcatgaagagcttat-aaaataagctgaaaacagcttatgaatatggcataag 13264101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 18637083 - 18637039
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaa 141  Q
    ||||||||| |||||||||||||   |||||||||||||||||||    
T  18637083 tattttcattagctatcttgaagatattatgaaaataagctgaaa 18637039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 19460449 - 19460405
Alignment:
Q  97 tattttcataagctatcttgaagtgcttatgaaaataagctgaaa 141  Q
    |||||||||||| |||||| |||  ||||||||||||||||||||    
T  19460449 tattttcataagttatcttcaagaacttatgaaaataagctgaaa 19460405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 20028550 - 20028502
Alignment:
Q  100 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    |||||||||||||  ||||| ||||||  ||||||||||||||||||||    
T  20028550 tttcataagctattatgaagagcttatagaaataagctgaaaacaactt 20028502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 29117033 - 29116966
Alignment:
Q  79 gataaaataaagttaaattattttc--ataagctatcttgaagtgcttatgaaaataagctgaaaaca 144  Q
    ||||||||||||| ||| | |||||  |||||||||| ||||  ||||||| ||||||||||||||||    
T  29117033 gataaaataaagtcaaactgttttcgtataagctatcctgaaaagcttatgcaaataagctgaaaaca 29116966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 4991 - 4927
Alignment:
Q  104 ataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||||||| |||| || ||||||| |  ||||||||||||||||| ||||||||| |||||||||    
T  4991 ataagctaccttggagagcttatggagttaagctgaaaacaacttatgaacatgttataagttgt 4927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 168
Target Start/End: Complemental strand, 12758 - 12696
Alignment:
Q  106 aagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    ||||||||||  || ||||||| |  ||||||||||||||||| || ||||||||||||||||    
T  12758 aagctatcttagagagcttatggagctaagctgaaaacaacttatggacatgtcataagttgt 12696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 33687 - 33639
Alignment:
Q  100 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 148  Q
    |||||||||||||  ||||| ||||||| ||||||||||||||||||||    
T  33687 tttcataagctattatgaagagcttatggaaataagctgaaaacaactt 33639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 10664 - 10609
Alignment:
Q  113 cttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 168  Q
    |||| |||| ||||| |||||||||||||||||||| || ||||||||| ||||||    
T  10664 cttgtagtgtttatggaaataagctgaaaacaacttatggacatgtcattagttgt 10609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 14614 - 14666
Alignment:
Q  94 aattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaac 146  Q
    ||||||||| ||||  |||||||||| | |||| |||||||||||||||||||    
T  14614 aattatttttataaaatatcttgaagagtttataaaaataagctgaaaacaac 14666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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