View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20897_low_15 (Length: 233)

Name: NF20897_low_15
Description: NF20897
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20897_low_15
NF20897_low_15
[»] chr4 (32 HSPs)
chr4 (1-233)||(10243772-10244005)
chr4 (62-233)||(10217717-10217888)
chr4 (83-233)||(10243547-10243697)
chr4 (120-207)||(10254169-10254256)
chr4 (83-232)||(10243428-10243577)
chr4 (120-232)||(10243593-10243705)
chr4 (90-217)||(10264797-10264924)
chr4 (116-214)||(10254477-10254575)
chr4 (132-217)||(10264647-10264732)
chr4 (102-226)||(10217589-10217713)
chr4 (83-202)||(10217703-10217822)
chr4 (83-229)||(10243656-10243802)
chr4 (162-214)||(10217316-10217368)
chr4 (105-172)||(10217193-10217260)
chr4 (105-172)||(10217283-10217350)
chr4 (90-217)||(10217643-10217770)
chr4 (102-205)||(10243530-10243633)
chr4 (86-160)||(10217565-10217639)
chr4 (87-169)||(10254477-10254559)
chr4 (96-205)||(10217565-10217674)
chr4 (162-214)||(10217226-10217278)
chr4 (87-145)||(10217700-10217758)
chr4 (162-208)||(10254213-10254259)
chr4 (116-162)||(10254589-10254635)
chr4 (102-172)||(10264647-10264717)
chr4 (126-191)||(10243349-10243414)
chr4 (120-172)||(10217373-10217425)
chr4 (162-214)||(10217406-10217458)
chr4 (120-172)||(10217463-10217515)
chr4 (105-205)||(10217685-10217785)
chr4 (86-162)||(10254454-10254530)
chr4 (102-206)||(10254515-10254619)


Alignment Details
Target: chr4 (Bit Score: 218; Significance: 1e-120; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 10244005 - 10243772
Alignment:
Q  1 cttgctttggaaactttat-tatctcttatttaacttatttacttaaaaacatccgagagtcctatgggtggtgaggaggtccgtaaactggtggcttct 99  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10244005 cttgctttggaaacattatatatctcttatttaacttatttacttaaaagcatccgagagtcctatgggtggtgaggaggtccgtaaactggtggcttct 10243906  T
Q  100 cgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggagg 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10243905 cgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggagg 10243806  T
Q  200 cttgtaaacgggtggcttgtagactggaggcttg 233  Q
    ||||||||||||||||||||||||||||||||||    
T  10243805 cttgtaaacgggtggcttgtagactggaggcttg 10243772  T

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Target: chr4; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 62 - 233
Target Start/End: Complemental strand, 10217888 - 10217717
Alignment:
Q  62 ctatgggtggtgaggaggtccgtaaactggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaa 161  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||     
T  10217888 ctatgggtggtgaggtggtccgtaaactggtggcttctcgactggaggcttgtaaaccggtggcttgtaaactggaggtttctcaactgggggtttgtag 10217789  T
Q  162 acaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttg 233  Q
    || || |||||||| || || |||||||| ||||| ||||||||||| || || ||||| || || ||||||    
T  10217788 accggaggcttgtacacaggtggcttctctactggtggcttgtaaactggaggtttgtacaccggtggcttg 10217717  T

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Target: chr4; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 83 - 233
Target Start/End: Complemental strand, 10243697 - 10243547
Alignment:
Q  83 gtaaactggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccgga 182  Q
    ||||||||| |||||||| ||||| ||||||||||| || || ||||||||||| |||||| | |||||||| ||||| |||||||||||||| || ||     
T  10243697 gtaaactggaggcttctcaactggtggcttgtaaacaggaggtttgtagactgggggtttcactactgggggtttgtatacaggtggcttgtaaactggg 10243598  T
Q  183 ggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggcttg 233  Q
    |||||||| ||||| || |||||||| ||||||||||| || || ||||||    
T  10243597 ggcttctctactggtggtttgtaaactggtggcttgtacaccggtggcttg 10243547  T

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Target: chr4; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 207
Target Start/End: Complemental strand, 10254256 - 10254169
Alignment:
Q  120 ggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaa 207  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| || | ||| || ||||| ||||| ||||| ||||||||||    
T  10254256 ggtggcttgtacactggaggtttctcaactgggggcttgtaaacaggaggttggtaaacaggaggtttctctactggtggcttgtaaa 10254169  T

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Target: chr4; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 232
Target Start/End: Complemental strand, 10243577 - 10243428
Alignment:
Q  83 gtaaactggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccgga 182  Q
    ||||||||||||||| |  || || ||||||||||| || || ||||||||||| |||||| | |||||||| ||||| |||||||||||||| |||||     
T  10243577 gtaaactggtggcttgtacaccggtggcttgtaaacaggaggtttgtagactgggggtttcactactgggggtttgtacacaggtggcttgtacaccggt 10243478  T
Q  183 ggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggctt 232  Q
    || || | |||||||||||| |  || |||||||| || ||||| |||||    
T  10243477 ggtttgtaaactggaggcttctctactggtggcttatatactggtggctt 10243428  T

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Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 10243705 - 10243593
Alignment:
Q  120 ggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgt 219  Q
    ||||||||||| |||||||| ||||||||||| |||||||||||||| || |||||||| || || ||| | ||||| || ||||| || ||||||||||    
T  10243705 ggtggcttgtaaactggaggcttctcaactggtggcttgtaaacaggaggtttgtagactgggggtttcactactgggggtttgtatacaggtggcttgt 10243606  T
Q  220 agactggaggctt 232  Q
    | ||||| |||||    
T  10243605 aaactgggggctt 10243593  T

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Target: chr4; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 90 - 217
Target Start/End: Complemental strand, 10264924 - 10264797
Alignment:
Q  90 ggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttct 189  Q
    ||||||||||| ||| |||| |||| ||| || ||||| |  ||||||||||| | |||||||||||| | ||| ||||||||||| |||||||| ||||    
T  10264924 ggtggcttctccacttgaggtttgtgaactggaggcttctctactggaggtttgtgaactgggggcttctcaactggtggcttgtacaccggaggtttct 10264825  T
Q  190 caactggaggcttgtaaacgggtggctt 217  Q
    | || || ||||||||||| ||| ||||    
T  10264824 ctacaggtggcttgtaaacaggtagctt 10264797  T

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Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 214
Target Start/End: Complemental strand, 10254575 - 10254477
Alignment:
Q  116 aaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtgg 214  Q
    ||||||||||||||| ||||| |||||||| || || ||||| | ||| |||||||||||  | ||||||||||||||||| |||||||| || |||||    
T  10254575 aaccggtggcttgtacactggtggtttctctacaggtggcttctcaactggtggcttgtaagctggaggcttctcaactggtggcttgtatacaggtgg 10254477  T

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Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 217
Target Start/End: Complemental strand, 10264732 - 10264647
Alignment:
Q  132 actggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggctt 217  Q
    ||||||||||| | |||||||||||| | ||||||||||||||| |||||||| ||||| || || ||||||||||| ||| ||||    
T  10264732 actggaggtttgtaaactgggggcttctcaacaggtggcttgtacaccggaggtttctctacaggtggcttgtaaacaggtagctt 10264647  T

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Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 226
Target Start/End: Complemental strand, 10217713 - 10217589
Alignment:
Q  102 actggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggct 201  Q
    ||||||||||| |  || || || |||||||| || |||||||| |||||||||||||| ||||||||||| |  || || ||||| | |||||||||||    
T  10217713 actggaggcttctctacaggaggtttgtagaccgggggtttctcgactgggggcttgtacacaggtggcttctcaactggtggcttataaactggaggct 10217614  T
Q  202 tgtaaacgggtggcttgtagactgg 226  Q
    | | ||| ||||||||||| |||||    
T  10217613 tctcaacaggtggcttgtacactgg 10217589  T

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Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 83 - 202
Target Start/End: Complemental strand, 10217822 - 10217703
Alignment:
Q  83 gtaaactggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccgga 182  Q
    ||||||||| || ||||| ||||| || ||||| ||||| |||||||| || || || ||||| ||||| ||||||||||| || || ||||| |||||     
T  10217822 gtaaactggaggtttctcaactgggggtttgtagaccggaggcttgtacacaggtggcttctctactggtggcttgtaaactggaggtttgtacaccggt 10217723  T
Q  183 ggcttctcaactggaggctt 202  Q
    ||||| | ||||||||||||    
T  10217722 ggcttgtaaactggaggctt 10217703  T

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Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 229
Target Start/End: Complemental strand, 10243802 - 10243656
Alignment:
Q  83 gtaaactggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccgga 182  Q
    |||||| |||||||| | ||||||||||||||| || ||||||||    ||||| || || |  ||||||||||||||||||||||||||    || ||     
T  10243802 gtaaacgggtggcttgtagactggaggcttgtatacaggtggcttcactactggtggcttgtagactgggggcttgtaaacaggtggcttcactactggt 10243703  T
Q  183 ggcttctcaactggaggcttgtaaacgggtggcttgtagactggagg 229  Q
    ||||| | |||||||||||| | ||| ||||||||||| || |||||    
T  10243702 ggcttgtaaactggaggcttctcaactggtggcttgtaaacaggagg 10243656  T

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Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 10217368 - 10217316
Alignment:
Q  162 acaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtgg 214  Q
    |||||||| |||||||||||||||||||||||||| |||||||| || |||||    
T  10217368 acaggtggtttgtagaccggaggcttctcaactggtggcttgtacactggtgg 10217316  T

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Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 10217260 - 10217193
Alignment:
Q  105 ggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggctt 172  Q
    |||||||| | ||| ||||||||||| ||||| |||||||| ||||| |||||||||||||| |||||    
T  10217260 ggaggcttttcaactggtggcttgtacactggtggtttctctactggtggcttgtaaacaggaggctt 10217193  T

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Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 10217350 - 10217283
Alignment:
Q  105 ggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggctt 172  Q
    |||||||| | ||| ||||||||||| ||||| |||||||| || || ||||||||||||||||||||    
T  10217350 ggaggcttctcaactggtggcttgtacactggtggtttctctacaggtggcttgtaaacaggtggctt 10217283  T

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Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 217
Target Start/End: Complemental strand, 10217770 - 10217643
Alignment:
Q  90 ggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttct 189  Q
    ||||||||||| ||||| ||||||||||| || || ||||| || || || || | |||||| ||||| |  ||||| || ||||||||||| || ||||    
T  10217770 ggtggcttctctactggtggcttgtaaactggaggtttgtacaccggtggcttgtaaactggaggcttctctacaggaggtttgtagaccgggggtttct 10217671  T
Q  190 caactggaggcttgtaaacgggtggctt 217  Q
    | ||||| |||||||| || ||||||||    
T  10217670 cgactgggggcttgtacacaggtggctt 10217643  T

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Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 205
Target Start/End: Complemental strand, 10243633 - 10243530
Alignment:
Q  102 actggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggct 201  Q
    ||||| || ||||| || ||||||||||| ||||| || ||||| ||||| || |||||||| ||||||||||| ||||| ||||| | ||| ||||| |    
T  10243633 actgggggtttgtatacaggtggcttgtaaactgggggcttctctactggtggtttgtaaactggtggcttgtacaccggtggcttgtaaacaggaggtt 10243534  T
Q  202 tgta 205  Q
    ||||    
T  10243533 tgta 10243530  T

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Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 10217639 - 10217565
Alignment:
Q  86 aactggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgta 160  Q
    |||||||||||| |  ||||||||||| | ||| ||||||||||| ||||| |||||||| ||||| ||||||||    
T  10217639 aactggtggcttataaactggaggcttctcaacaggtggcttgtacactggtggtttctctactggtggcttgta 10217565  T

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Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 169
Target Start/End: Complemental strand, 10254559 - 10254477
Alignment:
Q  87 actggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtgg 169  Q
    |||||||| ||||| || || ||||| | ||| |||||||||||  ||||||| ||||||||||| |||||||| ||||||||    
T  10254559 actggtggtttctctacaggtggcttctcaactggtggcttgtaagctggaggcttctcaactggtggcttgtatacaggtgg 10254477  T

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Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 205
Target Start/End: Complemental strand, 10217674 - 10217565
Alignment:
Q  96 ttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactg 195  Q
    ||||||||||| |||||||| || |||||||| |  ||||| || || | |||||| ||||| | ||||||||||||||| || || || ||||| ||||    
T  10217674 ttctcgactgggggcttgtacacaggtggcttctcaactggtggcttataaactggaggcttctcaacaggtggcttgtacactggtggtttctctactg 10217575  T
Q  196 gaggcttgta 205  Q
    | ||||||||    
T  10217574 gtggcttgta 10217565  T

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Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 10217278 - 10217226
Alignment:
Q  162 acaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtgg 214  Q
    |||||||| ||||||||||||||||| |||||||| |||||||| || |||||    
T  10217278 acaggtggtttgtagaccggaggcttttcaactggtggcttgtacactggtgg 10217226  T

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Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 145
Target Start/End: Complemental strand, 10217758 - 10217700
Alignment:
Q  87 actggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctc 145  Q
    ||||||||||| |  |||||||| ||||| |||||||||||||| |||||||| |||||    
T  10217758 actggtggcttgtaaactggaggtttgtacaccggtggcttgtaaactggaggcttctc 10217700  T

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Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 10254259 - 10254213
Alignment:
Q  162 acaggtggcttgtagaccggaggcttctcaactggaggcttgtaaac 208  Q
    |||||||||||||| || ||||| ||||||||||| |||||||||||    
T  10254259 acaggtggcttgtacactggaggtttctcaactgggggcttgtaaac 10254213  T

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Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 162
Target Start/End: Complemental strand, 10254635 - 10254589
Alignment:
Q  116 aaccggtggcttgtagactggaggtttctcaactgggggcttgtaaa 162  Q
    ||||||||||||||| |||||||| ||||||||||| || |||||||    
T  10254635 aaccggtggcttgtacactggaggcttctcaactggtggtttgtaaa 10254589  T

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Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 10264717 - 10264647
Alignment:
Q  102 actggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggctt 172  Q
    ||||| ||||| | ||| ||||||||||| || ||||||||||| || || ||||||||||||||| ||||    
T  10264717 actgggggcttctcaacaggtggcttgtacaccggaggtttctctacaggtggcttgtaaacaggtagctt 10264647  T

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Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 191
Target Start/End: Complemental strand, 10243414 - 10243349
Alignment:
Q  126 ttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctca 191  Q
    |||||||| || |||||||||||||| ||||| || || ||||| | ||| |||||||||||||||    
T  10243414 ttgtagaccgggggtttctcaactggtggcttatacaccggtggttggtaaaccggaggcttctca 10243349  T

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Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 10217425 - 10217373
Alignment:
Q  120 ggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggctt 172  Q
    ||||||||||| ||||| |||||||| || || ||||| ||||||||||||||    
T  10217425 ggtggcttgtacactggtggtttctctacaggtggcttataaacaggtggctt 10217373  T

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Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 10217458 - 10217406
Alignment:
Q  162 acaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtgg 214  Q
    ||||| || ||||||||||| |||||||||||||| |||||||| || |||||    
T  10217458 acagggggtttgtagaccgggggcttctcaactggtggcttgtacactggtgg 10217406  T

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Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 10217515 - 10217463
Alignment:
Q  120 ggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggctt 172  Q
    ||||||||||| ||||| |||||||| ||||| |||||||| ||||| |||||    
T  10217515 ggtggcttgtacactggcggtttctctactggtggcttgtagacaggaggctt 10217463  T

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Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 205
Target Start/End: Complemental strand, 10217785 - 10217685
Alignment:
Q  105 ggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgt 204  Q
    ||||||||||| || |||||||| |  ||||| || || | |||||| || ||||| || ||||||||||| || ||||||||||| || ||||| ||||    
T  10217785 ggaggcttgtacacaggtggcttctctactggtggcttgtaaactggaggtttgtacaccggtggcttgtaaactggaggcttctctacaggaggtttgt 10217686  T
Q  205 a 205  Q
    |    
T  10217685 a 10217685  T

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Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 162
Target Start/End: Complemental strand, 10254530 - 10254454
Alignment:
Q  86 aactggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaa 162  Q
    |||||||||||| |   |||||||||| | ||| ||||||||||| || || |||||||| ||||| ||||||||||    
T  10254530 aactggtggcttgtaagctggaggcttctcaactggtggcttgtatacaggtggtttctctactggtggcttgtaaa 10254454  T

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Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 206
Target Start/End: Complemental strand, 10254619 - 10254515
Alignment:
Q  102 actggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggct 201  Q
    ||||||||||| | ||| ||||| ||||| | ||| || |||||||| || |||||||| || ||||| || |  || || |||||||||||||| ||||    
T  10254619 actggaggcttctcaactggtggtttgtaaattgggggcttctcaaccggtggcttgtacactggtggtttctctacaggtggcttctcaactggtggct 10254520  T
Q  202 tgtaa 206  Q
    |||||    
T  10254519 tgtaa 10254515  T

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