View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20897_low_17 (Length: 211)

Name: NF20897_low_17
Description: NF20897
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20897_low_17
NF20897_low_17
[»] chr2 (46 HSPs)
chr2 (1-107)||(15750927-15751041)
chr2 (139-211)||(30717508-30717580)
chr2 (139-211)||(12668401-12668473)
chr2 (114-211)||(23058389-23058493)
chr2 (143-211)||(37419752-37419820)
chr2 (139-211)||(26769520-26769592)
chr2 (140-211)||(11223842-11223913)
chr2 (139-211)||(15657873-15657945)
chr2 (140-200)||(34784961-34785021)
chr2 (168-211)||(30404857-30404900)
chr2 (156-207)||(33153437-33153488)
chr2 (161-211)||(2438719-2438769)
chr2 (158-211)||(974756-974809)
chr2 (143-207)||(4882678-4882742)
chr2 (100-144)||(11223784-11223828)
chr2 (159-211)||(20539672-20539724)
chr2 (167-211)||(21374705-21374749)
chr2 (161-211)||(19536397-19536448)
chr2 (161-211)||(15972882-15972932)
chr2 (161-211)||(18421972-18422022)
chr2 (147-205)||(32749811-32749869)
chr2 (139-205)||(35056883-35056949)
chr2 (161-211)||(37558986-37559036)
chr2 (141-211)||(44860329-44860399)
chr2 (162-211)||(18841014-18841063)
chr2 (139-200)||(36096353-36096414)
chr2 (158-211)||(36756341-36756394)
chr2 (109-211)||(18631351-18631457)
chr2 (108-144)||(26769606-26769642)
chr2 (167-211)||(39323273-39323317)
chr2 (168-211)||(12940942-12940985)
chr2 (140-211)||(27286271-27286342)
chr2 (176-211)||(28677918-28677953)
chr2 (109-144)||(37419838-37419873)
chr2 (114-144)||(2438664-2438694)
chr2 (161-211)||(30335426-30335476)
chr2 (169-211)||(38117167-38117209)
chr2 (161-202)||(5040752-5040793)
chr2 (155-211)||(14996217-14996274)
chr2 (162-211)||(21091732-21091781)
chr2 (139-211)||(4207866-4207937)
chr2 (108-144)||(10535684-10535720)
chr2 (155-211)||(24894398-24894454)
chr2 (108-144)||(31285710-31285746)
chr2 (163-211)||(31808086-31808134)
chr2 (107-143)||(37559062-37559098)
[»] chr1 (73 HSPs)
chr1 (115-210)||(44482240-44482335)
chr1 (140-211)||(47989506-47989577)
chr1 (141-210)||(25361896-25361965)
chr1 (143-211)||(6612153-6612221)
chr1 (109-211)||(113308-113412)
chr1 (108-211)||(1704934-1705042)
chr1 (114-211)||(5376452-5376550)
chr1 (109-211)||(7918154-7918261)
chr1 (157-211)||(24577182-24577236)
chr1 (155-211)||(1486703-1486759)
chr1 (161-211)||(18337338-18337388)
chr1 (140-202)||(30173741-30173803)
chr1 (140-202)||(31694689-31694751)
chr1 (106-202)||(35919223-35919317)
chr1 (162-211)||(40258934-40258983)
chr1 (139-207)||(28273066-28273134)
chr1 (139-211)||(32461442-32461513)
chr1 (139-202)||(6427482-6427545)
chr1 (140-211)||(9629879-9629950)
chr1 (154-211)||(17778558-17778612)
chr1 (161-211)||(22515887-22515937)
chr1 (161-211)||(22881616-22881666)
chr1 (161-211)||(38078661-38078711)
chr1 (161-211)||(42359449-42359499)
chr1 (144-201)||(15449215-15449272)
chr1 (139-211)||(40917760-40917830)
chr1 (139-211)||(9828053-9828125)
chr1 (168-211)||(18190115-18190158)
chr1 (168-211)||(31015052-31015095)
chr1 (161-211)||(51410033-51410084)
chr1 (161-211)||(5927340-5927390)
chr1 (156-202)||(5944301-5944347)
chr1 (114-211)||(10572539-10572639)
chr1 (145-211)||(17754320-17754386)
chr1 (114-202)||(28663626-28663711)
chr1 (161-211)||(31672895-31672945)
chr1 (139-205)||(34371728-34371794)
chr1 (161-211)||(46348383-46348433)
chr1 (162-207)||(1815270-1815315)
chr1 (158-211)||(6332680-6332732)
chr1 (142-211)||(21038092-21038161)
chr1 (139-200)||(25934636-25934697)
chr1 (163-211)||(21378587-21378635)
chr1 (109-161)||(24334664-24334716)
chr1 (163-211)||(32434718-32434766)
chr1 (155-211)||(34712377-34712433)
chr1 (176-211)||(398780-398815)
chr1 (109-144)||(5898206-5898241)
chr1 (109-144)||(21365992-21366027)
chr1 (109-144)||(22515827-22515862)
chr1 (109-144)||(22947814-22947849)
chr1 (168-211)||(29144365-29144408)
chr1 (109-144)||(35702542-35702577)
chr1 (109-144)||(37598915-37598950)
chr1 (109-144)||(47989592-47989627)
chr1 (168-211)||(48450594-48450637)
chr1 (114-144)||(16297226-16297256)
chr1 (161-211)||(19058856-19058906)
chr1 (158-208)||(25272494-25272544)
chr1 (161-211)||(35702588-35702638)
chr1 (161-211)||(37598841-37598890)
chr1 (161-211)||(41877470-41877520)
chr1 (114-144)||(42359394-42359424)
chr1 (109-195)||(48547938-48548019)
chr1 (158-211)||(15323172-15323225)
chr1 (158-211)||(16164312-16164365)
chr1 (162-211)||(36878470-36878519)
chr1 (158-211)||(37055853-37055906)
chr1 (163-211)||(1864882-1864930)
chr1 (150-210)||(2283676-2283736)
chr1 (139-211)||(18556434-18556506)
chr1 (158-206)||(24462267-24462315)
chr1 (139-211)||(27471544-27471616)
[»] chr5 (59 HSPs)
chr5 (141-211)||(39698550-39698620)
chr5 (139-211)||(21522759-21522831)
chr5 (139-211)||(21533325-21533397)
chr5 (139-211)||(21542039-21542111)
chr5 (114-211)||(21351855-21351955)
chr5 (143-211)||(37328826-37328894)
chr5 (144-211)||(7677714-7677781)
chr5 (114-211)||(41995480-41995578)
chr5 (161-211)||(6247631-6247681)
chr5 (157-211)||(13287395-13287449)
chr5 (141-211)||(19579710-19579780)
chr5 (161-211)||(21191056-21191106)
chr5 (108-211)||(22423763-22423862)
chr5 (139-200)||(21814281-21814342)
chr5 (162-211)||(42893369-42893418)
chr5 (109-211)||(10298578-10298669)
chr5 (139-211)||(30183558-30183630)
chr5 (155-211)||(31084332-31084388)
chr5 (168-211)||(21576752-21576795)
chr5 (144-211)||(17088293-17088361)
chr5 (168-211)||(14674278-14674321)
chr5 (168-211)||(24906308-24906351)
chr5 (145-211)||(3966512-3966578)
chr5 (161-211)||(8420036-8420086)
chr5 (161-211)||(33178034-33178084)
chr5 (169-211)||(43001809-43001851)
chr5 (139-200)||(6401518-6401579)
chr5 (161-202)||(15884006-15884047)
chr5 (109-142)||(21194063-21194096)
chr5 (154-211)||(41633744-41633801)
chr5 (161-209)||(6326297-6326345)
chr5 (139-211)||(12641683-12641755)
chr5 (168-211)||(7218274-7218317)
chr5 (109-144)||(14873606-14873641)
chr5 (168-211)||(15405062-15405105)
chr5 (109-144)||(17123131-17123166)
chr5 (109-144)||(21576685-21576720)
chr5 (109-144)||(35017127-35017162)
chr5 (109-144)||(39698636-39698671)
chr5 (114-144)||(4105343-4105373)
chr5 (114-144)||(21191001-21191031)
chr5 (161-211)||(28588674-28588724)
chr5 (114-144)||(39268543-39268573)
chr5 (114-144)||(43001889-43001919)
chr5 (169-211)||(4105266-4105310)
chr5 (158-211)||(6471886-6471939)
chr5 (107-144)||(19820326-19820363)
chr5 (153-202)||(25888285-25888334)
chr5 (142-211)||(40131630-40131699)
chr5 (155-208)||(41558648-41558701)
chr5 (161-210)||(43564891-43564940)
chr5 (155-211)||(5894827-5894883)
chr5 (139-211)||(11685948-11686019)
chr5 (158-202)||(12199948-12199992)
chr5 (163-211)||(17177025-17177073)
chr5 (162-202)||(19028999-19029039)
chr5 (139-211)||(30098335-30098407)
chr5 (139-211)||(36642740-36642812)
chr5 (109-166)||(39695951-39696010)
[»] chr7 (55 HSPs)
chr7 (139-211)||(24339651-24339723)
chr7 (114-210)||(11272535-11272637)
chr7 (139-211)||(26033439-26033511)
chr7 (116-211)||(18215144-18215236)
chr7 (157-211)||(43027465-43027519)
chr7 (109-211)||(3991333-3991432)
chr7 (155-211)||(5409830-5409886)
chr7 (143-211)||(9408316-9408384)
chr7 (139-211)||(25822664-25822736)
chr7 (140-211)||(7438715-7438786)
chr7 (155-210)||(9778510-9778565)
chr7 (140-211)||(15902831-15902902)
chr7 (140-211)||(32308129-32308200)
chr7 (154-211)||(18039007-18039065)
chr7 (139-211)||(11665418-11665490)
chr7 (140-202)||(2334268-2334329)
chr7 (141-211)||(11831441-11831511)
chr7 (161-211)||(19213812-19213862)
chr7 (169-211)||(25481911-25481953)
chr7 (157-211)||(27945050-27945104)
chr7 (109-211)||(35861973-35862070)
chr7 (155-211)||(32094014-32094071)
chr7 (140-211)||(7058435-7058504)
chr7 (143-211)||(13300419-13300487)
chr7 (155-211)||(13770700-13770756)
chr7 (154-202)||(21560521-21560569)
chr7 (155-210)||(5548686-5548741)
chr7 (157-211)||(12843171-12843225)
chr7 (157-211)||(18013070-18013124)
chr7 (161-211)||(21880161-21880211)
chr7 (145-206)||(1885587-1885648)
chr7 (162-211)||(11061077-11061126)
chr7 (139-211)||(6028634-6028706)
chr7 (140-211)||(9933284-9933353)
chr7 (155-211)||(11890913-11890969)
chr7 (139-211)||(26329360-26329432)
chr7 (109-144)||(5409771-5409806)
chr7 (160-211)||(19992010-19992061)
chr7 (156-207)||(22602705-22602756)
chr7 (109-144)||(29763129-29763164)
chr7 (161-211)||(8234155-8234205)
chr7 (120-211)||(11700812-11700898)
chr7 (161-211)||(28155579-28155629)
chr7 (109-143)||(30813882-30813916)
chr7 (158-211)||(10042946-10042999)
chr7 (162-211)||(23191905-23191954)
chr7 (162-211)||(42720891-42720940)
chr7 (104-144)||(1433543-1433583)
chr7 (139-211)||(6630890-6630962)
chr7 (170-202)||(13557750-13557782)
chr7 (155-211)||(16341505-16341561)
chr7 (108-144)||(21880236-21880272)
chr7 (108-144)||(24339737-24339773)
chr7 (104-144)||(28973876-28973916)
chr7 (162-206)||(48438560-48438604)
[»] chr3 (58 HSPs)
chr3 (139-211)||(14209122-14209194)
chr3 (139-211)||(14832108-14832180)
chr3 (109-211)||(4990912-4991017)
chr3 (139-211)||(41961628-41961700)
chr3 (119-211)||(1509548-1509643)
chr3 (139-211)||(750596-750668)
chr3 (139-211)||(4987269-4987341)
chr3 (114-211)||(34910326-34910431)
chr3 (140-211)||(49651766-49651836)
chr3 (139-211)||(15796272-15796344)
chr3 (159-211)||(28918010-28918062)
chr3 (162-211)||(10268487-10268536)
chr3 (139-211)||(14216901-14216973)
chr3 (139-211)||(14223030-14223102)
chr3 (155-211)||(25948881-25948937)
chr3 (143-211)||(28812524-28812592)
chr3 (109-211)||(3163971-3164075)
chr3 (108-211)||(11610530-11610629)
chr3 (130-211)||(14747570-14747655)
chr3 (168-211)||(26508119-26508162)
chr3 (161-211)||(10954961-10955011)
chr3 (157-211)||(34185119-34185173)
chr3 (161-211)||(51206353-51206403)
chr3 (161-211)||(55401084-55401134)
chr3 (161-209)||(8587021-8587069)
chr3 (143-211)||(14829699-14829766)
chr3 (163-211)||(20503474-20503522)
chr3 (159-211)||(21256984-21257036)
chr3 (140-211)||(1550149-1550220)
chr3 (114-211)||(3610642-3610741)
chr3 (140-211)||(16789021-16789092)
chr3 (161-211)||(25775517-25775568)
chr3 (161-211)||(7928459-7928509)
chr3 (161-211)||(21479127-21479177)
chr3 (157-211)||(27505255-27505309)
chr3 (146-211)||(8039820-8039885)
chr3 (108-144)||(8842413-8842449)
chr3 (151-211)||(9800049-9800109)
chr3 (108-144)||(20503549-20503585)
chr3 (139-211)||(55212972-55213043)
chr3 (156-211)||(11313795-11313850)
chr3 (140-211)||(16192729-16192800)
chr3 (109-144)||(34185052-34185087)
chr3 (168-211)||(35994745-35994787)
chr3 (109-144)||(55401159-55401194)
chr3 (161-211)||(8383266-8383316)
chr3 (161-203)||(8593154-8593196)
chr3 (114-144)||(8789493-8789523)
chr3 (177-211)||(14979190-14979224)
chr3 (106-144)||(21861659-21861697)
chr3 (161-211)||(26492205-26492255)
chr3 (158-208)||(39002044-39002094)
chr3 (157-211)||(39756245-39756299)
chr3 (161-211)||(49505154-49505204)
chr3 (152-209)||(15314867-15314924)
chr3 (139-211)||(15812801-15812871)
chr3 (158-211)||(17005616-17005669)
chr3 (154-203)||(17276742-17276791)
[»] chr8 (43 HSPs)
chr8 (108-211)||(25566850-25566950)
chr8 (139-211)||(2572034-2572106)
chr8 (141-211)||(22651985-22652055)
chr8 (108-211)||(13436909-13437014)
chr8 (139-211)||(15816107-15816179)
chr8 (157-207)||(30271287-30271337)
chr8 (142-211)||(29510285-29510354)
chr8 (109-211)||(8342981-8343086)
chr8 (160-211)||(8343325-8343376)
chr8 (161-211)||(4948661-4948711)
chr8 (141-211)||(29447090-29447160)
chr8 (139-211)||(21465421-21465493)
chr8 (156-211)||(17468503-17468558)
chr8 (139-202)||(24727730-24727793)
chr8 (141-207)||(27067280-27067344)
chr8 (140-211)||(28745507-28745578)
chr8 (161-211)||(20873078-20873128)
chr8 (161-211)||(30077387-30077437)
chr8 (142-211)||(4673406-4673475)
chr8 (162-211)||(22197743-22197792)
chr8 (139-211)||(24362179-24362252)
chr8 (109-150)||(31514932-31514973)
chr8 (163-211)||(40332200-40332248)
chr8 (140-211)||(4611543-4611614)
chr8 (168-211)||(41831947-41831990)
chr8 (161-211)||(3025560-3025610)
chr8 (141-211)||(11927066-11927136)
chr8 (169-211)||(36450762-36450804)
chr8 (162-211)||(4298887-4298936)
chr8 (168-211)||(18407728-18407771)
chr8 (113-144)||(31109462-31109493)
chr8 (169-211)||(22596003-22596045)
chr8 (161-211)||(24613530-24613579)
chr8 (161-211)||(24669442-24669492)
chr8 (107-144)||(11927013-11927050)
chr8 (158-211)||(11944674-11944727)
chr8 (162-211)||(20679396-20679445)
chr8 (109-142)||(22197671-22197704)
chr8 (139-200)||(26902153-26902214)
chr8 (162-211)||(31557006-31557054)
chr8 (161-193)||(30271255-30271287)
chr8 (156-200)||(34451032-34451076)
chr8 (143-211)||(36934679-36934747)
[»] chr6 (59 HSPs)
chr6 (139-211)||(8365497-8365569)
chr6 (139-211)||(16766706-16766778)
chr6 (140-211)||(5970087-5970158)
chr6 (145-211)||(9107354-9107420)
chr6 (158-211)||(31384929-31384982)
chr6 (155-211)||(12696333-12696389)
chr6 (157-211)||(10770670-10770724)
chr6 (118-211)||(21395262-21395357)
chr6 (140-211)||(8713988-8714060)
chr6 (139-211)||(9522900-9522972)
chr6 (168-211)||(31959168-31959211)
chr6 (161-211)||(34595143-34595193)
chr6 (139-200)||(16488568-16488629)
chr6 (139-211)||(17435208-17435280)
chr6 (161-211)||(7801156-7801206)
chr6 (161-211)||(7977830-7977880)
chr6 (106-211)||(9911479-9911579)
chr6 (140-209)||(10339104-10339174)
chr6 (161-211)||(28715304-28715354)
chr6 (108-200)||(4388105-4388200)
chr6 (116-211)||(7930314-7930413)
chr6 (114-211)||(9025450-9025544)
chr6 (139-211)||(17302565-17302638)
chr6 (163-211)||(16833317-16833365)
chr6 (140-200)||(18367856-18367916)
chr6 (168-211)||(1681767-1681810)
chr6 (161-211)||(403864-403914)
chr6 (161-211)||(426514-426564)
chr6 (161-211)||(853859-853909)
chr6 (169-211)||(8776981-8777023)
chr6 (161-211)||(17841589-17841639)
chr6 (161-211)||(28152108-28152157)
chr6 (166-211)||(17341669-17341714)
chr6 (155-211)||(2117085-2117140)
chr6 (144-208)||(26562701-26562765)
chr6 (168-211)||(1191707-1191750)
chr6 (109-144)||(4878026-4878061)
chr6 (109-211)||(7723199-7723300)
chr6 (144-211)||(9617443-9617510)
chr6 (176-211)||(16388248-16388283)
chr6 (109-144)||(17327590-17327625)
chr6 (169-211)||(4118341-4118383)
chr6 (161-211)||(6898281-6898331)
chr6 (161-211)||(7265593-7265643)
chr6 (114-144)||(17841534-17841564)
chr6 (161-211)||(19040361-19040411)
chr6 (140-210)||(33340364-33340434)
chr6 (140-210)||(35125664-35125734)
chr6 (161-210)||(1700362-1700411)
chr6 (162-211)||(7938125-7938174)
chr6 (162-211)||(15489733-15489782)
chr6 (154-211)||(34073340-34073397)
chr6 (159-211)||(7151421-7151473)
chr6 (108-144)||(10842617-10842653)
chr6 (155-211)||(16111751-16111807)
chr6 (97-137)||(24833168-24833208)
chr6 (171-211)||(25010212-25010252)
chr6 (139-211)||(25038049-25038121)
chr6 (108-144)||(34595218-34595254)
[»] scaffold0136 (1 HSPs)
scaffold0136 (140-211)||(3828-3899)
[»] scaffold0223 (1 HSPs)
scaffold0223 (154-211)||(20181-20238)
[»] chr4 (56 HSPs)
chr4 (109-211)||(11596297-11596402)
chr4 (114-211)||(4383377-4383480)
chr4 (155-211)||(3947760-3947816)
chr4 (139-211)||(19482677-19482749)
chr4 (139-211)||(51701267-51701339)
chr4 (161-211)||(28964248-28964298)
chr4 (155-211)||(12895110-12895166)
chr4 (139-211)||(24613679-24613751)
chr4 (139-211)||(27706155-27706227)
chr4 (163-211)||(29205453-29205501)
chr4 (139-207)||(30982856-30982924)
chr4 (161-211)||(21945512-21945562)
chr4 (161-211)||(23292986-23293036)
chr4 (114-202)||(28084540-28084638)
chr4 (161-211)||(38847012-38847062)
chr4 (161-211)||(54580023-54580073)
chr4 (109-202)||(12708165-12708261)
chr4 (163-211)||(6485613-6485661)
chr4 (109-211)||(30298955-30299048)
chr4 (109-211)||(30327823-30327916)
chr4 (139-199)||(46083969-46084029)
chr4 (139-202)||(22234868-22234931)
chr4 (108-202)||(42640547-42640644)
chr4 (141-211)||(903931-904001)
chr4 (161-211)||(12797338-12797387)
chr4 (139-200)||(5414150-5414211)
chr4 (108-144)||(715544-715580)
chr4 (108-144)||(752870-752906)
chr4 (143-211)||(847960-848028)
chr4 (109-211)||(5775304-5775408)
chr4 (144-211)||(14126093-14126161)
chr4 (141-181)||(53490744-53490784)
chr4 (109-144)||(3064868-3064903)
chr4 (139-202)||(19312353-19312416)
chr4 (109-167)||(20633529-20633590)
chr4 (109-144)||(23292926-23292961)
chr4 (108-211)||(37203273-37203372)
chr4 (161-211)||(49431034-49431085)
chr4 (161-211)||(2361975-2362025)
chr4 (161-211)||(8423718-8423768)
chr4 (161-211)||(12895274-12895324)
chr4 (161-211)||(16073404-16073453)
chr4 (114-144)||(22440562-22440592)
chr4 (106-144)||(28470449-28470487)
chr4 (161-211)||(34306804-34306853)
chr4 (169-211)||(40481646-40481687)
chr4 (169-202)||(715615-715648)
chr4 (169-202)||(752941-752974)
chr4 (161-206)||(6879465-6879510)
chr4 (174-211)||(14465088-14465125)
chr4 (158-211)||(16303263-16303316)
chr4 (162-211)||(35157986-35158035)
chr4 (108-144)||(29205552-29205588)
chr4 (108-144)||(36635414-36635450)
chr4 (139-211)||(38148703-38148775)
chr4 (108-144)||(49431110-49431146)
[»] scaffold0008 (1 HSPs)
scaffold0008 (139-211)||(263350-263422)
[»] scaffold0086 (2 HSPs)
scaffold0086 (139-202)||(2946-3009)
scaffold0086 (115-143)||(3024-3052)
[»] scaffold0450 (1 HSPs)
scaffold0450 (143-211)||(8617-8685)
[»] scaffold0044 (1 HSPs)
scaffold0044 (139-211)||(53189-53261)
[»] scaffold0171 (2 HSPs)
scaffold0171 (143-202)||(23529-23588)
scaffold0171 (155-202)||(23438-23485)
[»] scaffold0019 (1 HSPs)
scaffold0019 (139-202)||(71743-71806)
[»] scaffold0018 (1 HSPs)
scaffold0018 (156-211)||(178813-178869)
[»] scaffold0003 (2 HSPs)
scaffold0003 (139-211)||(241603-241675)
scaffold0003 (108-144)||(241689-241725)
[»] scaffold0652 (1 HSPs)
scaffold0652 (161-211)||(462-512)
[»] scaffold0103 (1 HSPs)
scaffold0103 (169-211)||(51820-51862)
[»] scaffold0027 (2 HSPs)
scaffold0027 (161-211)||(46691-46741)
scaffold0027 (109-145)||(46740-46776)
[»] scaffold0025 (1 HSPs)
scaffold0025 (158-211)||(23778-23832)
[»] scaffold0361 (1 HSPs)
scaffold0361 (170-211)||(14539-14580)
[»] scaffold0011 (1 HSPs)
scaffold0011 (162-211)||(17750-17799)
[»] scaffold0036 (1 HSPs)
scaffold0036 (140-211)||(9726-9797)
[»] scaffold0021 (1 HSPs)
scaffold0021 (168-211)||(130491-130534)
[»] scaffold1528 (1 HSPs)
scaffold1528 (145-211)||(1044-1110)
[»] scaffold0050 (1 HSPs)
scaffold0050 (161-211)||(70287-70337)
[»] scaffold0004 (4 HSPs)
scaffold0004 (165-211)||(92816-92862)
scaffold0004 (144-208)||(83172-83236)
scaffold0004 (114-144)||(92906-92936)
scaffold0004 (162-198)||(123650-123686)
[»] scaffold0623 (1 HSPs)
scaffold0623 (139-200)||(5974-6035)
[»] scaffold0123 (1 HSPs)
scaffold0123 (139-208)||(44503-44572)
[»] scaffold0793 (2 HSPs)
scaffold0793 (108-144)||(4820-4856)
scaffold0793 (169-202)||(4891-4924)
[»] scaffold0057 (1 HSPs)
scaffold0057 (139-211)||(24034-24105)
[»] scaffold0049 (2 HSPs)
scaffold0049 (154-210)||(56932-56988)
scaffold0049 (162-211)||(63782-63831)
[»] scaffold0475 (1 HSPs)
scaffold0475 (109-144)||(3392-3427)
[»] scaffold0306 (1 HSPs)
scaffold0306 (161-211)||(13409-13459)
[»] scaffold0246 (1 HSPs)
scaffold0246 (169-211)||(19585-19626)
[»] scaffold0152 (1 HSPs)
scaffold0152 (161-211)||(21868-21918)
[»] scaffold0122 (1 HSPs)
scaffold0122 (161-211)||(8019-8068)
[»] scaffold0066 (1 HSPs)
scaffold0066 (173-211)||(33375-33413)
[»] scaffold0053 (1 HSPs)
scaffold0053 (161-211)||(8807-8857)
[»] scaffold0020 (1 HSPs)
scaffold0020 (157-211)||(135308-135362)
[»] scaffold0236 (1 HSPs)
scaffold0236 (158-211)||(25765-25818)
[»] scaffold0009 (1 HSPs)
scaffold0009 (116-144)||(188484-188512)


Alignment Details
Target: chr2 (Bit Score: 82; Significance: 7e-39; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 15750927 - 15751041
Alignment:
Q  1 cttactttgtttcttagattcatgtttggttttactgttatttatacttttacatatgttcatgattaattacgttcta--------agtatttaatcat 92  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||    
T  15750927 cttactttgtttcttggattcatgtttggttttactgttatttatacttttacatatgttcatgattaattacgttctaatcgttagagtatttaatcat 15751026  T
Q  93 gaacatatgtaacat 107  Q
    |||||||||||||||    
T  15751027 gaacatatgtaacat 15751041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 30717508 - 30717580
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||| | ||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||    
T  30717508 cgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtgattttttcaaattatt 30717580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 12668401 - 12668473
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||| ||| ||||||||||||||| ||||||| ||||||||||| ||||||| ||||||||||||||||    
T  12668401 cgtgtcgtatccaataccgacacgacaccgacacttataattacactgaattatgtcattttttcaaattatt 12668473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 114 - 211
Target Start/End: Original strand, 23058389 - 23058493
Alignment:
Q  114 aagcacggacactcctcggattaggcgtgtc---gtgtccgata---ccgacacgacactgacacttgtaattacactgcattatgtga-ttttttcaaa 206  Q
    ||||||||||||| |||||||||||||||||   ||||| || |   |||||||||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  23058389 aagcacggacacttctcggattaggcgtgtcccggtgtcggacaacaccgacacgacaccgacacttgtaattacactggattatgtgatttttttcaaa 23058488  T
Q  207 ttatt 211  Q
    |||||    
T  23058489 ttatt 23058493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 37419820 - 37419752
Alignment:
Q  143 tcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||| ||||||||||||| | ||||||||||||||||| ||| ||||||||||||||||||||    
T  37419820 tcgtgtccgacaccgacacgacaccggcacttgtaattacactgaattttgtgattttttcaaattatt 37419752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 26769592 - 26769520
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||   || ||||||| |||||||||||||    
T  26769592 cgtgtcgtgtccgataccgacatgacaccgacacttgtaattacaccagataatgtgatattttcaaattatt 26769520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 11223842 - 11223913
Alignment:
Q  140 gtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||| ||| ||| ||||| ||||||||||||||||||| ||||||| ||||||||||| ||||    
T  11223842 gtgtcgtgtccgacacctacatgacaccgacacttgtaattacactgaattatgttattttttcaaaatatt 11223913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 15657945 - 15657873
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||| |||||| | | ||||||||| |||| |||||||||||||| |||||||||||||| |||||||||    
T  15657945 cgtgtcgcgtccgacatcaacacgacaccgacatttgtaattacactgaattatgtgatttttacaaattatt 15657873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 34784961 - 34785021
Alignment:
Q  140 gtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgatttt 200  Q
    ||||||||||||||||||||||||||| ||||| | ||||||||||  |||||||||||||    
T  34784961 gtgtcgtgtccgataccgacacgacaccgacacatataattacactaaattatgtgatttt 34785021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 168 - 211
Target Start/End: Original strand, 30404857 - 30404900
Alignment:
Q  168 gacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  30404857 gacacttgtaattacactgaattatgtgattttttcaaattatt 30404900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 33153488 - 33153437
Alignment:
Q  156 cgacacgacactgacacttgtaattacactgcattatgtgattttttcaaat 207  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||| ||||    
T  33153488 cgacacgacacggacacttgtaattacactgaattatgtgatttttttaaat 33153437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 2438719 - 2438769
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||| ||||||||||||||| ||||||||    
T  2438719 cgacaccgacacttgtaattacactgaattatgtgattttttgaaattatt 2438769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 974809 - 974756
Alignment:
Q  158 acacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||| ||||||||||||||||||| || ||||||| |||||||||||||    
T  974809 acacgacaccgacacttgtaattacactgaataatgtgatcttttcaaattatt 974756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 4882678 - 4882742
Alignment:
Q  143 tcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaat 207  Q
    ||||||| || ||||||||||||  ||||||||||||||||||| ||||| | ||||||||||||    
T  4882678 tcgtgtctgacaccgacacgacatcgacacttgtaattacactgaattatatcattttttcaaat 4882742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 11223784 - 11223828
Alignment:
Q  100 tgtaacattctataaagcacggacactcctcggattaggcgtgtc 144  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||    
T  11223784 tgtaacattctatgaagcacggacactcctcagattaggcgtgtc 11223828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 20539672 - 20539724
Alignment:
Q  159 cacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||| ||||||||||||||||||  ||||| ||||||||||||||||||    
T  20539672 cacgacaccgacacttgtaattacactaaattatatgattttttcaaattatt 20539724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 21374705 - 21374749
Alignment:
Q  167 tgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||    
T  21374705 tgacacttgtaattacactgaattatgtaattttttcaaattatt 21374749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 19536397 - 19536448
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtga-ttttttcaaattatt 211  Q
    |||||| ||||||||||||||||||| ||||||||| |||||||||||||||    
T  19536397 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattatt 19536448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 15972932 - 15972882
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||| ||| ||| ||||||||||||||||    
T  15972932 cgacaccgacacttgtaattacactgaattgtgtaattttttcaaattatt 15972882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 18422022 - 18421972
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||| |||||||||| |||| ||||||||    
T  18422022 cgacaccgacacttgtaattacactgaattatgtgatatttttaaattatt 18421972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 32749811 - 32749869
Alignment:
Q  147 gtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaa 205  Q
    |||||| | ||||||||||||||||||| | ||||||||| ||||||||||||| ||||    
T  32749811 gtccgacatcgacacgacactgacacttattattacactgaattatgtgattttctcaa 32749869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 35056949 - 35056883
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaa 205  Q
    |||||||||||||| ||||||||||||| ||||| | ||||||||||| ||||| || |||| ||||    
T  35056949 cgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatatggttttctcaa 35056883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 37559036 - 37558986
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| |||||||||||||||| || |||||||||||||| |||||||||    
T  37559036 cgacaccgacacttgtaattacattgaattatgtgatttttacaaattatt 37558986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 44860399 - 44860329
Alignment:
Q  141 tgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||| | ||| ||||||||| ||||| | ||||||||||| |||||| |||||| ||||||||||    
T  44860399 tgtcgtgtccaacaccaacacgacaccgacacatataattacactgaattatgcgattttctcaaattatt 44860329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 18841014 - 18841063
Alignment:
Q  162 gacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||| ||||||||||||||||||  ||||||| ||||||||||||||||    
T  18841014 gacaccgacacttgtaattacacttaattatgtaattttttcaaattatt 18841063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 200
Target Start/End: Original strand, 36096353 - 36096414
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgatttt 200  Q
    |||||||||||||| | ||||||||||| ||||  | ||||||||||||||| |||||||||    
T  36096353 cgtgtcgtgtccgacatcgacacgacaccgacaaatataattacactgcattttgtgatttt 36096414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 36756341 - 36756394
Alignment:
Q  158 acacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||| ||||||| ||||||||||| ||||||| |||| |||||||||||    
T  36756341 acacgacaccgacacttataattacactgaattatgttatttcttcaaattatt 36756394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 18631351 - 18631457
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtc---gtgtccgataccgacacgacactgacacttgtaattacactgcattatgtga-ttttttca 204  Q
    |||| |||| ||||||||||||| ||||||||||||   ||||| || ||||| |||| ||||| || | |||||||| || || |||||| ||||||||    
T  18631351 ctatgaagctcggacactcctcgcattaggcgtgtcccagtgtctgacaccgatacgatactgatacatataattacattgaatgatgtgatttttttca 18631450  T
Q  205 aattatt 211  Q
    |||||||    
T  18631451 aattatt 18631457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 144
Target Start/End: Complemental strand, 26769642 - 26769606
Alignment:
Q  108 tctataaagcacggacactcctcggattaggcgtgtc 144  Q
    ||||| |||||||||||||||||||||||||||||||    
T  26769642 tctatgaagcacggacactcctcggattaggcgtgtc 26769606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 39323317 - 39323273
Alignment:
Q  167 tgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||||||||| ||||||| ||||| ||||||||||    
T  39323317 tgacacttgtaattacactgaattatgtaattttgtcaaattatt 39323273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 211
Target Start/End: Original strand, 12940942 - 12940985
Alignment:
Q  168 gacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||| |||||||||||||| ||||| ||||||||||||||||||    
T  12940942 gacatttgtaattacactgaattatatgattttttcaaattatt 12940985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 27286271 - 27286342
Alignment:
Q  140 gtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||| | ||||| |||| |||||| | ||||||||||  |||||||||| || ||||||||||    
T  27286271 gtgtcgtgtccgacatcgacatgacattgacacctataattacacttaattatgtgatcttatcaaattatt 27286342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 211
Target Start/End: Complemental strand, 28677953 - 28677918
Alignment:
Q  176 taattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||| ||||||||||||||||||||||||    
T  28677953 taattacactgaattatgtgattttttcaaattatt 28677918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 144
Target Start/End: Complemental strand, 37419873 - 37419838
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtc 144  Q
    |||| |||||||||||||||||||||||||||||||    
T  37419873 ctatgaagcacggacactcctcggattaggcgtgtc 37419838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 144
Target Start/End: Original strand, 2438664 - 2438694
Alignment:
Q  114 aagcacggacactcctcggattaggcgtgtc 144  Q
    |||||||||||||||||||||||||||||||    
T  2438664 aagcacggacactcctcggattaggcgtgtc 2438694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 30335476 - 30335426
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| |||| |||||||||||||  ||||||| ||||||||||||||||    
T  30335476 cgacaccgacatttgtaattacactaaattatgtcattttttcaaattatt 30335426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 38117167 - 38117209
Alignment:
Q  169 acacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||||| | | ||||||||||||||||||||||    
T  38117167 acacttgtaattacaccgaagtatgtgattttttcaaattatt 38117209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 5040793 - 5040752
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgatttttt 202  Q
    |||||| |||||||||||||||| || |||||||||||||||    
T  5040793 cgacaccgacacttgtaattacattgaattatgtgatttttt 5040752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 14996217 - 14996274
Alignment:
Q  155 ccgacacgacactgacacttgtaattacactgcattatgtga-ttttttcaaattatt 211  Q
    |||||| ||||| ||||||||||||||||||  ||||| ||| |||||||||||||||    
T  14996217 ccgacaagacaccgacacttgtaattacactaaattatatgatttttttcaaattatt 14996274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 21091781 - 21091732
Alignment:
Q  162 gacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||||||||||||||| | ||||| ||||| | ||||||||    
T  21091781 gacactgacacttgtaattacactgaagtatgttattttcttaaattatt 21091732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 4207937 - 4207866
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||| |||||||||| || ||||  | ||||||||||  |||||| | |||||||||||||||    
T  4207937 cgtgtcgtgtccgacaccgacacgataccgaca-atataattacactaaattatgcgcttttttcaaattatt 4207866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 144
Target Start/End: Original strand, 10535684 - 10535720
Alignment:
Q  108 tctataaagcacggacactcctcggattaggcgtgtc 144  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  10535684 tctatgaagcacgaacactcctcggattaggcgtgtc 10535720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 24894454 - 24894398
Alignment:
Q  155 ccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||| ||  |||||| ||||| ||||| ||||||||||||||| ||||||||    
T  24894454 ccgacacgaaaccaacacttttaattgcactgaattatgtgatttttttaaattatt 24894398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 144
Target Start/End: Original strand, 31285710 - 31285746
Alignment:
Q  108 tctataaagcacggacactcctcggattaggcgtgtc 144  Q
    |||||||||||| |||||||||||||||||| |||||    
T  31285710 tctataaagcacagacactcctcggattaggtgtgtc 31285746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 31808134 - 31808086
Alignment:
Q  163 acactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||| | ||||||||||| ||||||||||||| | ||||||||    
T  31808134 acactgacacatataattacactgaattatgtgattttgttaaattatt 31808086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 143
Target Start/End: Complemental strand, 37559098 - 37559062
Alignment:
Q  107 ttctataaagcacggacactcctcggattaggcgtgt 143  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  37559098 ttctatgaagcacggacactcctcggattaagcgtgt 37559062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 4e-28; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 115 - 210
Target Start/End: Complemental strand, 44482335 - 44482240
Alignment:
Q  115 agcacggacactcctcggattaggcgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattat 210  Q
    |||||||||||||||||||||||  ||||||||||||| ||||||||||||| ||||| | ||||||||||| ||||||||||||| |||||||||    
T  44482335 agcacggacactcctcggattagctgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 47989577 - 47989506
Alignment:
Q  140 gtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||    
T  47989577 gtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgatttttttaaattatt 47989506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 25361965 - 25361896
Alignment:
Q  141 tgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattat 210  Q
    |||||||||||| ||||||||||||||||||| | ||||||||||| ||||||||||||| |||||||||    
T  25361965 tgtcgtgtccgacaccgacacgacactgacacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 6612153 - 6612221
Alignment:
Q  143 tcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||| | ||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||    
T  6612153 tcgtgtccgacatcgacacgacaccgacacttgtaattacactgaattatgtaattttttcaaattatt 6612221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 113412 - 113308
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtc---gtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaa 205  Q
    |||| ||||| || ||||||||||||||||||||||   ||||  || || ||||||||||  |||||||||||||||||| ||||||||||||||||||    
T  113412 ctatgaagcatgggcactcctcggattaggcgtgtcccggtgttggacac-gacacgacacctacacttgtaattacactgaattatgtgattttttcaa 113314  T
Q  206 attatt 211  Q
    ||||||    
T  113313 attatt 113308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 1704934 - 1705042
Alignment:
Q  108 tctataaagcacggacactcctcggattaggcgtgtc---gtgtccgatacc--gacacgacactgacacttgtaattacactgcattatgtgatttttt 202  Q
    ||||| ||||| |||||||||| ||||||||||||||   ||||| || ||   |||||||||| ||||||||||||||| ||| |||||||||||||||    
T  1704934 tctatgaagcatggacactccttggattaggcgtgtctcggtgtcggacacgttgacacgacaccgacacttgtaattaccctgaattatgtgatttttt 1705033  T
Q  203 caaattatt 211  Q
    |||||||||    
T  1705034 caaattatt 1705042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 114 - 211
Target Start/End: Original strand, 5376452 - 5376550
Alignment:
Q  114 aagcacggacactcctcggattaggcgtgt-cgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| |||||||||||||||||  |||| ||||||||| | ||||||||||| ||||||| ||||||||||| ||||||| ||||| | ||||||||    
T  5376452 aagcacagacactcctcggattagatgtgtgcgtgtccgacatcgacacgacaccgacacttttaattacactgaattatgttattttcttaaattatt 5376550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 7918154 - 7918261
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtc---gtgtccgatacc--gacacgacactgacacttgtaattacactgcattatgtgattttttc 203  Q
    |||| ||||||||||||||||||||||||| |||||   ||||| || ||   |||||||||||||||| | ||||||||||| ||||||||||||| ||    
T  7918154 ctatgaagcacggacactcctcggattaggtgtgtcctggtgtcagaaacgttgacacgacactgacacatataattacactgaattatgtgattttctc 7918253  T
Q  204 aaattatt 211  Q
    ||||||||    
T  7918254 aaattatt 7918261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 24577182 - 24577236
Alignment:
Q  157 gacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  24577182 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 24577236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 1486703 - 1486759
Alignment:
Q  155 ccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||    
T  1486703 ccgacacgacaccgacacttataattacactgaattatgtgattttttcaaattatt 1486759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 18337388 - 18337338
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  18337388 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 30173741 - 30173803
Alignment:
Q  140 gtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgatttttt 202  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||  |||||| |||||||    
T  30173741 gtgtcgtgtccgatacggacacgacaccgacacttgtaattacactgagttatgtaatttttt 30173803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 31694689 - 31694751
Alignment:
Q  140 gtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgatttttt 202  Q
    |||| |||||||| ||||||||||||| |||||||||||||| |||| |||||||||||||||    
T  31694689 gtgttgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttttt 31694751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 106 - 202
Target Start/End: Original strand, 35919223 - 35919317
Alignment:
Q  106 attctataaagcacggacactcctcggattaggcgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgatttttt 202  Q
    ||||||| ||||||||||| ||||| |||||||||||||  |  ||   |||||||||||| ||||||| ||||||||||| |||||||||||||||    
T  35919223 attctatgaagcacggacagtcctccgattaggcgtgtcccg--cgtgtccgacacgacacggacacttataattacactgaattatgtgatttttt 35919317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 40258934 - 40258983
Alignment:
Q  162 gacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  40258934 gacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 40258983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 28273066 - 28273134
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaat 207  Q
    |||||||||||||| | ||| | ||||| ||||||||||||||||||| ||||| ||||||||||||||    
T  28273066 cgtgtcgtgtccgacatcgataggacaccgacacttgtaattacactgaattatatgattttttcaaat 28273134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 32461442 - 32461513
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||| |||||||| ||||  ||||||||||||||| |  ||||||||||||||||||||||||    
T  32461442 cgtgtcgtgtccgacaccgacac-acaccaacacttgtaattacattaaattatgtgattttttcaaattatt 32461513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 6427545 - 6427482
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgatttttt 202  Q
    ||||||||||||||  || |||||||||||||||||||| ||||| || |||||||||||||||    
T  6427545 cgtgtcgtgtccgacgcctacacgacactgacacttgtagttacattgaattatgtgatttttt 6427482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 9629879 - 9629950
Alignment:
Q  140 gtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||| | ||||||||||| ||||||| |||| |||||| ||||| ||||||| ||||||||||    
T  9629879 gtgtcgtgtccgacatcgacacgacaccgacacttataatcacactgaattatatgattttatcaaattatt 9629950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 17778612 - 17778558
Alignment:
Q  154 accgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||| |||||||||||||||||||   ||||||||||||||||||||||    
T  17778612 accgacacgacaccgacacttgtaattacactg---tatgtgattttttcaaattatt 17778558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 22515887 - 22515937
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  22515887 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattatt 22515937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 22881616 - 22881666
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  22881616 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattatt 22881666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 38078661 - 38078711
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| |||||||||||||||| || ||||||||||||||||||||||||    
T  38078661 cgacaccgacacttgtaattacattgaattatgtgattttttcaaattatt 38078711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 42359449 - 42359499
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||||||||||    
T  42359449 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattatt 42359499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 15449215 - 15449272
Alignment:
Q  144 cgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttt 201  Q
    ||||||||| ||||| ||||||| ||||||||||||||||||  ||||||||||||||    
T  15449215 cgtgtccgacaccgatacgacacagacacttgtaattacactaaattatgtgattttt 15449272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 40917830 - 40917760
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||| | ||||||||||||| || |||||||||||||||  ||  ||||||||||||||||||||    
T  40917830 cgtgtcgtgtccaacaccgacacgacaccgagacttgtaattacacttaat--tgtgattttttcaaattatt 40917760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 9828125 - 9828053
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||| || || |||||||||| ||||| |  |||||||||| ||||||||||||| ||||||||||    
T  9828125 cgtgtcgtgtctgacacggacacgacaccgacacataaaattacactgaattatgtgattttatcaaattatt 9828053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 211
Target Start/End: Original strand, 18190115 - 18190158
Alignment:
Q  168 gacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||    
T  18190115 gacacttgtaattacactgaattatgtaattttttcaaattatt 18190158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 211
Target Start/End: Complemental strand, 31015095 - 31015052
Alignment:
Q  168 gacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  31015095 gacacttgtaattacactgaattatgtgattttctcaaattatt 31015052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 51410084 - 51410033
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgatt-ttttcaaattatt 211  Q
    |||||| ||||||||||||||||||| ||||||||||| |||||||||||||    
T  51410084 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattatt 51410033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 5927340 - 5927390
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||||||||||||| |  ||||| ||||||||||||||||||    
T  5927340 cgacactgacacttgtaattacattaaattatatgattttttcaaattatt 5927390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 5944347 - 5944301
Alignment:
Q  156 cgacacgacactgacacttgtaattacactgcattatgtgatttttt 202  Q
    ||||||||||| ||||||| ||||||||||| |||||||||||||||    
T  5944347 cgacacgacaccgacacttataattacactgaattatgtgatttttt 5944301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 114 - 211
Target Start/End: Original strand, 10572539 - 10572639
Alignment:
Q  114 aagcacggacactcctcggattaggcgtgtc---gtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattat 210  Q
    |||||||||||||||| | ||||||||||||   ||| | || ||| |||| |||| ||||| | ||||||||| | ||||||||||||| |||||||||    
T  10572539 aagcacggacactccttgaattaggcgtgtccacgtgcctgacaccaacacaacaccgacacatttaattacaccgaattatgtgattttctcaaattat 10572638  T
Q  211 t 211  Q
    |    
T  10572639 t 10572639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 145 - 211
Target Start/End: Complemental strand, 17754386 - 17754320
Alignment:
Q  145 gtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| | |||||||| |||||||||| | || |||||||| ||||||| ||||||||||||||||    
T  17754386 gtgtccaacaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattatt 17754320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 28663711 - 28663626
Alignment:
Q  114 aagcacggacactcctcggattaggcgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgatttttt 202  Q
    |||||| ||||||||||| |||||||||||  ||   |||| ||| ||||||| ||||||||||||||||  | |||||||||||||||    
T  28663711 aagcacagacactcctcgaattaggcgtgttctg---gatatcgatacgacaccgacacttgtaattacatagaattatgtgatttttt 28663626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 31672895 - 31672945
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| || |||||||||||||||| |||| |||||||||||||||||||    
T  31672895 cgacaccgagacttgtaattacactgaattaagtgattttttcaaattatt 31672945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 34371794 - 34371728
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaa 205  Q
    |||||||| ||||| ||| ||||||||| ||||| | ||||||||||| ||||||||||||| ||||    
T  34371794 cgtgtcgtatccgacaccaacacgacaccgacacatataattacactgaattatgtgattttctcaa 34371728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 46348383 - 46348433
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||  ||||| ||||||||||||||||||    
T  46348383 cgacaccgacacttgtaattacactaaattatatgattttttcaaattatt 46348433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 1815315 - 1815270
Alignment:
Q  162 gacactgacacttgtaattacactgcattatgtgattttttcaaat 207  Q
    ||||| ||||||||||||||||||| ||||||||||||||| ||||    
T  1815315 gacaccgacacttgtaattacactgaattatgtgattttttaaaat 1815270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 6332732 - 6332680
Alignment:
Q  158 acacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||| || |||||||||||||||| |||||||||| |||||||||||||    
T  6332732 acacgacaccgatacttgtaattacactgaattatgtgat-ttttcaaattatt 6332680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 21038161 - 21038092
Alignment:
Q  142 gtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||| ||||||||||||||||| | | | ||||||||| ||||||| ||||| | ||||||||    
T  21038161 gtcgtgtccgacaccgacacgacactgacgcatatgattacactgaattatgtaattttcttaaattatt 21038092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 25934697 - 25934636
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgatttt 200  Q
    |||||||||||||| |||||||||| || ||||| | ||||||||||| ||| |||||||||    
T  25934697 cgtgtcgtgtccgacaccgacacgataccgacacatataattacactgtattttgtgatttt 25934636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 21378635 - 21378587
Alignment:
Q  163 acactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||| ||||||||||||||||||| ||||||| |||||||||| |||||    
T  21378635 acaccgacacttgtaattacactgaattatgtaattttttcaatttatt 21378587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 24334664 - 24334716
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtcgtgtccgataccgacac 161  Q
    |||| ||||||||||||| || |||||||||||| ||||||||| ||||||||    
T  24334664 ctatgaagcacggacactacttggattaggcgtgacgtgtccgacaccgacac 24334716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 32434718 - 32434766
Alignment:
Q  163 acactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||| |||||||||||||||| || ||||||||| ||||||||||||||    
T  32434718 acacagacacttgtaattacaatgaattatgtgactttttcaaattatt 32434766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 34712377 - 34712433
Alignment:
Q  155 ccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||||||| | ||||||||||  ||||||| ||||| ||||||||||    
T  34712377 ccgacacgacactgacacatataattacactaaattatgttattttctcaaattatt 34712433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 211
Target Start/End: Original strand, 398780 - 398815
Alignment:
Q  176 taattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||| ||||||||||||||||||||||||    
T  398780 taattacactgaattatgtgattttttcaaattatt 398815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 144
Target Start/End: Original strand, 5898206 - 5898241
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtc 144  Q
    ||||||||||||||||||||||||||||| ||||||    
T  5898206 ctataaagcacggacactcctcggattagacgtgtc 5898241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 144
Target Start/End: Original strand, 21365992 - 21366027
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtc 144  Q
    |||| |||||||||||||||||||||||||||||||    
T  21365992 ctatgaagcacggacactcctcggattaggcgtgtc 21366027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 144
Target Start/End: Original strand, 22515827 - 22515862
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtc 144  Q
    |||| |||||||||||||||||||||||||||||||    
T  22515827 ctatgaagcacggacactcctcggattaggcgtgtc 22515862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 144
Target Start/End: Complemental strand, 22947849 - 22947814
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtc 144  Q
    |||| |||||||||||||||||||||||||||||||    
T  22947849 ctatgaagcacggacactcctcggattaggcgtgtc 22947814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 211
Target Start/End: Original strand, 29144365 - 29144408
Alignment:
Q  168 gacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||||||||||||||| |  |||||||||||||||    
T  29144365 gacacttgtaattacactgcattatctatttttttcaaattatt 29144408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 144
Target Start/End: Original strand, 35702542 - 35702577
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtc 144  Q
    |||| |||||||||||||||||||||||||||||||    
T  35702542 ctatgaagcacggacactcctcggattaggcgtgtc 35702577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 144
Target Start/End: Complemental strand, 37598950 - 37598915
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtc 144  Q
    |||| |||||||||||||||||||||||||||||||    
T  37598950 ctatgaagcacggacactcctcggattaggcgtgtc 37598915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 144
Target Start/End: Complemental strand, 47989627 - 47989592
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtc 144  Q
    |||| |||||||||||||||||||||||||||||||    
T  47989627 ctatgaagcacggacactcctcggattaggcgtgtc 47989592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 211
Target Start/End: Original strand, 48450594 - 48450637
Alignment:
Q  168 gacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||||||||  ||||||| ||||||||||||||||    
T  48450594 gacacttgtaattacactaaattatgttattttttcaaattatt 48450637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 144
Target Start/End: Original strand, 16297226 - 16297256
Alignment:
Q  114 aagcacggacactcctcggattaggcgtgtc 144  Q
    |||||||||||||||||||||||||||||||    
T  16297226 aagcacggacactcctcggattaggcgtgtc 16297256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 19058856 - 19058906
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||| ||||||| || |||| ||||||||    
T  19058856 cgacaccgacacttgtaattacactgaattatgttatctttttaaattatt 19058906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 25272544 - 25272494
Alignment:
Q  158 acacgacactgacacttgtaattacactgcattatgtgattttttcaaatt 208  Q
    ||||||||| ||||||| ||||||||||  ||||||||||||| |||||||    
T  25272544 acacgacaccgacacttataattacactaaattatgtgattttctcaaatt 25272494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 35702588 - 35702638
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||||||||||||||  ||||| |||  |||||||||||||    
T  35702588 cgacactgacacttgtaattacacttaattatttgaagttttcaaattatt 35702638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 37598890 - 37598841
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  37598890 cgacaccgacacttataattacactgaatt-tgtgattttttcaaattatt 37598841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 41877470 - 41877520
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||  ||||||| ||||| ||||||||||    
T  41877470 cgacaccgacacttgtaattacactaaattatgtaattttctcaaattatt 41877520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 144
Target Start/End: Original strand, 42359394 - 42359424
Alignment:
Q  114 aagcacggacactcctcggattaggcgtgtc 144  Q
    |||||||||||||||||||||||||||||||    
T  42359394 aagcacggacactcctcggattaggcgtgtc 42359424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 195
Target Start/End: Original strand, 48547938 - 48548019
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtg 195  Q
    |||| |||||||||||||||||| ||||||||| ||     ||| |||||||||||||  | ||||||||||||| || ||||||||    
T  48547938 ctatgaagcacggacactcctcgaattaggcgtatc-----cgacaccgacacgacaccaatacttgtaattacattgaattatgtg 48548019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 15323225 - 15323172
Alignment:
Q  158 acacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| || |||||||  |||||||||  ||||||||||||||||||||||||    
T  15323225 acacgatacagacacttacaattacactaaattatgtgattttttcaaattatt 15323172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 16164312 - 16164365
Alignment:
Q  158 acacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||| |||||| | |||||||| |  ||||||||||||||||||||||||    
T  16164312 acacgacaatgacacatataattacattaaattatgtgattttttcaaattatt 16164365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 36878519 - 36878470
Alignment:
Q  162 gacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||| ||||| | ||||||||||| ||||||||||||| ||||||||||    
T  36878519 gacaccgacacctataattacactgaattatgtgattttctcaaattatt 36878470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 37055853 - 37055906
Alignment:
Q  158 acacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||| |||||||||||||||  ||||||| ||||| ||||||||||    
T  37055853 acacgatactgatacttgtaattacactaaattatgtaattttctcaaattatt 37055906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 1864882 - 1864930
Alignment:
Q  163 acactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||| ||||| | ||||||||||| ||||||||||||| ||||||||||    
T  1864882 acaccgacacatataattacactgaattatgtgattttctcaaattatt 1864930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 2283736 - 2283676
Alignment:
Q  150 cgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattat 210  Q
    |||||| || |||||||  |||||| |||||||| || || ||||||||||||||||||||    
T  2283736 cgatacggatacgacaccaacacttataattacattgaatcatgtgattttttcaaattat 2283676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 18556434 - 18556506
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||| ||| || |||| ||||||||  | ||||||||||||| |  |||||||||| |||||||||||||    
T  18556434 cgtgtcgggtctgacaccgtcacgacaccaatacttgtaattacattaaattatgtgatattttcaaattatt 18556506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 24462267 - 24462315
Alignment:
Q  158 acacgacactgacacttgtaattacactgcattatgtgattttttcaaa 206  Q
    |||||||||||| |||||| |||||| || ||||||| |||||||||||    
T  24462267 acacgacactgaaacttgtgattacattgaattatgtcattttttcaaa 24462315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 27471544 - 27471616
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||| ||| | ||||| | |||||  |||| ||||||||||||| |||||||| |||| ||||||||||    
T  27471544 cgtgtcgtatccaacaccgatatgacaccaacacatgtaattacactgaattatgtgcttttctcaaattatt 27471616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 1e-27; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 39698620 - 39698550
Alignment:
Q  141 tgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39698620 tgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattatt 39698550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 21522831 - 21522759
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||| ||||||||||||| |||| |||||||||||||| ||||||| ||||||| ||||||||    
T  21522831 cgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattatt 21522759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 21533397 - 21533325
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||| ||||||||||||| |||| |||||||||||||| ||||||| ||||||| ||||||||    
T  21533397 cgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattatt 21533325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 21542111 - 21542039
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||| || |||| ||||||||    
T  21542111 cgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgttatctttttaaattatt 21542039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 114 - 211
Target Start/End: Original strand, 21351855 - 21351955
Alignment:
Q  114 aagcacggacactcctcggattaggcgtgtc---gtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattat 210  Q
    |||||||||||||| ||||||||| |||||    ||||| || ||||||| ||||| ||||||||||||||||||| ||||||||| |||||| ||||||    
T  21351855 aagcacggacactcttcggattagacgtgttccagtgtcggacaccgacatgacaccgacacttgtaattacactgaattatgtgactttttccaattat 21351954  T
Q  211 t 211  Q
    |    
T  21351955 t 21351955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 37328826 - 37328894
Alignment:
Q  143 tcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||| ||| |||||||||| |||||||||    
T  37328826 tcgtgtccgacaccgacacgacaccgacacatgtaattacactgaattttgtgatttttacaaattatt 37328894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 7677781 - 7677714
Alignment:
Q  144 cgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| || ||||||||||||| ||||||| ||||| ||||| ||||||||||||||||||||||||    
T  7677781 cgtgtcagacaccgacacgacaccgacacttctaattgcactgaattatgtgattttttcaaattatt 7677714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 114 - 211
Target Start/End: Complemental strand, 41995578 - 41995480
Alignment:
Q  114 aagcacggacactcctcggattaggcgtg---tcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattat 210  Q
    |||||||||||||||| ||||||||||||   |||||||||| ||||| ||| ||| ||||||  |||||||| || |||||||||||||||| ||||||    
T  41995578 aagcacggacactcctaggattaggcgtgtcctcgtgtccgacaccgatacggcaccgacact--taattacattgaattatgtgattttttcgaattat 41995481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 6247681 - 6247631
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  6247681 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 6247631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 13287395 - 13287449
Alignment:
Q  157 gacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||| |||||||||| |||||||| ||||||||||||||||||||||||    
T  13287395 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatt 13287449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 19579780 - 19579710
Alignment:
Q  141 tgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||| || |||||||||| ||||||||||||| ||||  ||||||||||||| ||||||||||    
T  19579780 tgtcgtgtccgacactgacacgacaccgacacttgtaattgcactaaattatgtgattttctcaaattatt 19579710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 21191056 - 21191106
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  21191056 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 21191106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 22423763 - 22423862
Alignment:
Q  108 tctataaagcacggacactcctcggattaggcgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaat 207  Q
    ||||| |||||||||||||||||||||||||||||||    | || ||||||||||||| ||||  | |||||| | || ||||||||||||| ||||||    
T  22423763 tctatgaagcacggacactcctcggattaggcgtgtc----cagacaccgacacgacaccgacatatataattatattgaattatgtgattttctcaaat 22423858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 21814342 - 21814281
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgatttt 200  Q
    |||||||||||||| ||||||||||||| ||||| | ||||||||||||||| |||||||||    
T  21814342 cgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgatttt 21814281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 42893418 - 42893369
Alignment:
Q  162 gacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  42893418 gacaccgacacttgtaattacactggattatgtgattttttcaaattatt 42893369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 10298669 - 10298578
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaatt 208  Q
    |||| |||||||||||||||||||||||||||||||           ||| ||||||| |||||||||||||||| || ||||||||| |||||||||||    
T  10298669 ctatgaagcacggacactcctcggattaggcgtgtc-----------cgatacgacaccgacacttgtaattacattgtattatgtgactttttcaaatt 10298581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 30183630 - 30183558
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||| |||||| ||||||||| |||||||||||||| || | || ||||||| |||||||||||||    
T  30183630 cgtgtcgtgtctgataccaacacgacaccgacacttgtaattaaaccgaataatgtgatattttcaaattatt 30183558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 31084388 - 31084332
Alignment:
Q  155 ccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||  |||||||||||||||| || ||||||||||||||||||||||||    
T  31084388 ccgacacgacatcgacacttgtaattacattgaattatgtgattttttcaaattatt 31084332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 168 - 211
Target Start/End: Original strand, 21576752 - 21576795
Alignment:
Q  168 gacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  21576752 gacacttgtaattacactgaattatgtgattttttcaaattatt 21576795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 17088361 - 17088293
Alignment:
Q  144 cgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgatt-ttttcaaattatt 211  Q
    |||| |||| |||||||||||| ||||||||||||| |||||  ||||||||||| |||||||||||||    
T  17088361 cgtgaccgacaccgacacgacagtgacacttgtaatcacactaaattatgtgatttttttcaaattatt 17088293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 211
Target Start/End: Complemental strand, 14674321 - 14674278
Alignment:
Q  168 gacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  14674321 gacacttgtaattacactaaattatgtgattttttcaaattatt 14674278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 211
Target Start/End: Original strand, 24906308 - 24906351
Alignment:
Q  168 gacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||    
T  24906308 gacacttgtaattacactgaattatgtcattttttcaaattatt 24906351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 145 - 211
Target Start/End: Complemental strand, 3966578 - 3966512
Alignment:
Q  145 gtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||| || |||||||||| ||||| | ||||||||||| ||| ||||||||| ||||||||||    
T  3966578 gtgtccgacactgacacgacaccgacacatataattacactgaattgtgtgattttctcaaattatt 3966512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 8420086 - 8420036
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| |||||||||||||||| || ||||||| ||||||||||||||||    
T  8420086 cgacaccgacacttgtaattacattgaattatgttattttttcaaattatt 8420036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 33178084 - 33178034
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||  ||||||||||||||| ||||||||    
T  33178084 cgacaccgacacttgtaattacactaaattatgtgatttttttaaattatt 33178034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 43001851 - 43001809
Alignment:
Q  169 acacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||||||| ||||||| ||||||||||||||||    
T  43001851 acacttgtaattacactgaattatgtaattttttcaaattatt 43001809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 6401579 - 6401518
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgatttt 200  Q
    |||||||||||||| || |||||||||| ||||| | ||||||||||| ||| |||||||||    
T  6401579 cgtgtcgtgtccgacactgacacgacaccgacacatataattacactgtattttgtgatttt 6401518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 15884047 - 15884006
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgatttttt 202  Q
    |||||| ||||||||||||||||||| |||||||||||||||    
T  15884047 cgacaccgacacttgtaattacactgaattatgtgatttttt 15884006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 142
Target Start/End: Original strand, 21194063 - 21194096
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtg 142  Q
    ||||||||||||||||||||||||||||||||||    
T  21194063 ctataaagcacggacactcctcggattaggcgtg 21194096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 41633801 - 41633744
Alignment:
Q  154 accgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||| ||||||| |||| |||||||||||||| ||||||| | ||||||||||||||    
T  41633801 accgatacgacaccgacatttgtaattacactgaattatgtaaatttttcaaattatt 41633744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 6326297 - 6326345
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaatta 209  Q
    |||| ||||||||||||||||||||| ||||||| ||||| ||||||||    
T  6326297 cgacgctgacacttgtaattacactgaattatgtaattttctcaaatta 6326345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 12641755 - 12641683
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||| ||||| || ||| ||||||||||||||| || ||||| |||  ||||||||||||||| ||||||||    
T  12641755 cgtgttgtgtctgacaccaacacgacactgacacgtgcaattatactaaattatgtgatttttttaaattatt 12641683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 211
Target Start/End: Original strand, 7218274 - 7218317
Alignment:
Q  168 gacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||||||||| |||||||||||| || ||||||||    
T  7218274 gacacttgtaattacactgaattatgtgatttatttaaattatt 7218317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 144
Target Start/End: Complemental strand, 14873641 - 14873606
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtc 144  Q
    |||| |||||||||||||||||||||||||||||||    
T  14873641 ctatgaagcacggacactcctcggattaggcgtgtc 14873606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 211
Target Start/End: Original strand, 15405062 - 15405105
Alignment:
Q  168 gacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||||| || ||||| ||||||||||||||||||    
T  15405062 gacacttgtaattacattgaattatatgattttttcaaattatt 15405105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 144
Target Start/End: Complemental strand, 17123166 - 17123131
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtc 144  Q
    |||| |||||||||||||||||||||||||||||||    
T  17123166 ctatgaagcacggacactcctcggattaggcgtgtc 17123131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 144
Target Start/End: Original strand, 21576685 - 21576720
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtc 144  Q
    |||| |||||||||||||||||||||||||||||||    
T  21576685 ctatgaagcacggacactcctcggattaggcgtgtc 21576720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 144
Target Start/End: Complemental strand, 35017162 - 35017127
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtc 144  Q
    |||| |||||||||||||||||||||||||||||||    
T  35017162 ctatgaagcacggacactcctcggattaggcgtgtc 35017127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 144
Target Start/End: Complemental strand, 39698671 - 39698636
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtc 144  Q
    |||| |||||||||||||||||||||||||||||||    
T  39698671 ctatgaagcacggacactcctcggattaggcgtgtc 39698636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 144
Target Start/End: Complemental strand, 4105373 - 4105343
Alignment:
Q  114 aagcacggacactcctcggattaggcgtgtc 144  Q
    |||||||||||||||||||||||||||||||    
T  4105373 aagcacggacactcctcggattaggcgtgtc 4105343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 144
Target Start/End: Original strand, 21191001 - 21191031
Alignment:
Q  114 aagcacggacactcctcggattaggcgtgtc 144  Q
    |||||||||||||||||||||||||||||||    
T  21191001 aagcacggacactcctcggattaggcgtgtc 21191031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 28588674 - 28588724
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||| | ||||||||||| ||||||||||||| ||||||||||    
T  28588674 cgacaccgacacctataattacactgaattatgtgattttctcaaattatt 28588724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 144
Target Start/End: Original strand, 39268543 - 39268573
Alignment:
Q  114 aagcacggacactcctcggattaggcgtgtc 144  Q
    |||||||||||||||||||||||||||||||    
T  39268543 aagcacggacactcctcggattaggcgtgtc 39268573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 144
Target Start/End: Complemental strand, 43001919 - 43001889
Alignment:
Q  114 aagcacggacactcctcggattaggcgtgtc 144  Q
    |||||||||||||||||||||||||||||||    
T  43001919 aagcacggacactcctcggattaggcgtgtc 43001889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 4105310 - 4105266
Alignment:
Q  169 acacttgtaattacactgcattatgtga--ttttttcaaattatt 211  Q
    |||||||||||||||||| |||||||||  |||||||||||||||    
T  4105310 acacttgtaattacactgaattatgtgatcttttttcaaattatt 4105266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 6471886 - 6471939
Alignment:
Q  158 acacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||  |||| | ||||||||||| ||||||||||||| ||||||||||    
T  6471886 acacgacacccacacatataattacactgaattatgtgattttctcaaattatt 6471939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 144
Target Start/End: Original strand, 19820326 - 19820363
Alignment:
Q  107 ttctataaagcacggacactcctcggattaggcgtgtc 144  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  19820326 ttctatgaagcacggacactcctctgattaggcgtgtc 19820363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 25888285 - 25888334
Alignment:
Q  153 taccgacacgacactgacacttgtaattacactgcattatgtgatttttt 202  Q
    |||||||||||||| || |||| ||||||||||| ||||| |||||||||    
T  25888285 taccgacacgacacggagacttataattacactgaattatatgatttttt 25888334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 40131699 - 40131630
Alignment:
Q  142 gtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||| || | ||| ||||||| || | || |||||| |||| ||||||||||||||||||||||||    
T  40131699 gtcgtgtctgacatcgatacgacaccgatatttataattaaactgaattatgtgattttttcaaattatt 40131630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 41558648 - 41558701
Alignment:
Q  155 ccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaatt 208  Q
    |||||||||||||||||| | |||||||| || ||||||| ||||| |||||||    
T  41558648 ccgacacgacactgacacatttaattacattgaattatgtcattttctcaaatt 41558701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 43564940 - 43564891
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattat 210  Q
    |||||| ||||||| ||||||||||  |||||||||||||| ||||||||    
T  43564940 cgacaccgacacttataattacactaaattatgtgatttttccaaattat 43564891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 5894827 - 5894883
Alignment:
Q  155 ccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||| |||||||||| ||| | |  ||||| ||||||||||||||||||    
T  5894827 ccgacacgacaccgacacttgtagttagattaaattatatgattttttcaaattatt 5894883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 11686019 - 11685948
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||| ||||| ||||||| ||||| | ||||||||||  |||||| || ||| ||||||||||    
T  11686019 cgtgtcgtgtccgacaccga-acgacaccgacacatataattacactaaattatgcgactttctcaaattatt 11685948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 12199992 - 12199948
Alignment:
Q  158 acacgacactgacacttgtaattacactgcattatgtgatttttt 202  Q
    ||||||||| |||||||||||||  |||| |||||||||||||||    
T  12199992 acacgacaccgacacttgtaattgtactgaattatgtgatttttt 12199948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 17177025 - 17177073
Alignment:
Q  163 acactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||| |||||||||||||||| || ||| | ||||||||||||||||||    
T  17177025 acaccgacacttgtaattacaatgaattttttgattttttcaaattatt 17177073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 19028999 - 19029039
Alignment:
Q  162 gacactgacacttgtaattacactgcattatgtgatttttt 202  Q
    ||||| ||||||||| ||||||||| |||||||||||||||    
T  19028999 gacacagacacttgtgattacactggattatgtgatttttt 19029039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 30098407 - 30098335
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||| || ||| ||| || ||||  | |||||||| || ||||||||||||| ||||||||||    
T  30098407 cgtgtcgtgtccgacactgactcgataccgacatctataattacattgaattatgtgattttctcaaattatt 30098335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 36642740 - 36642812
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||| ||| ||| ||||| ||||||| || |||||||  | ||||| | ||||||||||||||    
T  36642740 cgtgtcgtgtccgacaccaacatgacaccgacacttatatttacactaaaatatgtcactttttcaaattatt 36642812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 39695951 - 39696010
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgt--cgtgtccgataccgacacgacac 166  Q
    |||| |||||| ||||||||| |||||||||||||  |||||| || |||||||||||||    
T  39695951 ctatgaagcaccgacactcctaggattaggcgtgtcccgtgtcggacaccgacacgacac 39696010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 2e-26; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 24339723 - 24339651
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  24339723 cgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 24339651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 114 - 210
Target Start/End: Original strand, 11272535 - 11272637
Alignment:
Q  114 aagcacggacactcctcggattaggcgtgtc----gtgtccgataccgacacgacactgacacttgtaattacactgcat--tatgtgattttttcaaat 207  Q
    |||||| || |||||||||||||||||||||    |||||||| ||||||||||||| ||||||||||||||||||| ||  ||||||||||||||||||    
T  11272535 aagcacagatactcctcggattaggcgtgtcccgcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatatgtgattttttcaaat 11272634  T
Q  208 tat 210  Q
    |||    
T  11272635 tat 11272637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 26033439 - 26033511
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| |||| || |||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||    
T  26033439 cgtgtcatgtctgacaccgacacgagaccgacacttgtaattacactgaattatgtgattttttcaaattatt 26033511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 116 - 211
Target Start/End: Original strand, 18215144 - 18215236
Alignment:
Q  116 gcacggacactcctcggattaggcgtgtcgtgtccgataccg-acacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||||| |||||||||||||    ||| |  || ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  18215144 gcacggacactcctcagattaggcgtgtc----ccggtgtcggacacgacaccgacacttgtaactacactgcattatgtgattttttcaaattatt 18215236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 43027465 - 43027519
Alignment:
Q  157 gacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  43027465 gacacgacaccgacacttgtatttacactgcattatgtgattttttcaaattatt 43027519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 3991432 - 3991333
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaatt 208  Q
    |||| |||| ||||||||||||||||||||||||||     ||||||    ||||||| |||||||||||||| |||| |||||||||||||||||||||    
T  3991432 ctatgaagcccggacactcctcggattaggcgtgtcccagtcgatacg---acgacaccgacacttgtaattatactgaattatgtgattttttcaaatt 3991336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 5409830 - 5409886
Alignment:
Q  155 ccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||    
T  5409830 ccgacacgacaccgacacttgtaattgcactgaattatgtgattttttcaaattatt 5409886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 9408316 - 9408384
Alignment:
Q  143 tcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||| || ||||| ||||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  9408316 tcgtgtctgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttttcaaattatt 9408384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 25822736 - 25822664
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||| ||| ||   |||||||||||||||    
T  25822736 cgtgtcgtgtccgataccgatacgacaccgacacttgtaattacactgaattgtgattttttttcaaattatt 25822664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 7438786 - 7438715
Alignment:
Q  140 gtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||  || ||||||| ||||| |||||||||||||||| || ||||||||||||||||||||||||    
T  7438786 gtgtcgtgtttgacaccgacatgacaccgacacttgtaattacattgaattatgtgattttttcaaattatt 7438715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 9778565 - 9778510
Alignment:
Q  155 ccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattat 210  Q
    |||||||||||| |||||||||||||| |||| |||||||||||||||||||||||    
T  9778565 ccgacacgacaccgacacttgtaattatactgaattatgtgattttttcaaattat 9778510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 15902902 - 15902831
Alignment:
Q  140 gtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||||||||||| |||| ||||| | ||||||||||  ||||||||||||| ||||||||||    
T  15902902 gtgtcgtgtccgataccgacacaacaccgacacatataattacactaaattatgtgattttatcaaattatt 15902831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 32308200 - 32308129
Alignment:
Q  140 gtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||| | ||||||||||||||||||| |  |||||||||| ||||||||||||| ||||||||||    
T  32308200 gtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaattatgtgattttctcaaattatt 32308129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 18039065 - 18039007
Alignment:
Q  154 accgacacgacactgacacttgtaattacactgcattatgtgatt-ttttcaaattatt 211  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||    
T  18039065 accgacacgacaccgacacttgtaattacactgaattatgtgatttttttcaaattatt 18039007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 11665418 - 11665490
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||| ||| ||||||| ||||  ||||||| |||||| |||| ||||||||||||||||||||||||    
T  11665418 cgtgtcgtgttcgacaccgacatgacatcgacacttataattagactgaattatgtgattttttcaaattatt 11665490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 2334329 - 2334268
Alignment:
Q  140 gtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgatttttt 202  Q
    ||||||||||||| || |||||||||| ||||||||||||||||||  |||||||||||||||    
T  2334329 gtgtcgtgtccgacac-gacacgacaccgacacttgtaattacactaaattatgtgatttttt 2334268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 11831511 - 11831441
Alignment:
Q  141 tgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||| ||||| |||||||  | |||||||||||||||  ||||| ||||||||||||||||||    
T  11831511 tgtcgtgtccgacaccgatacgacacgaatacttgtaattacactaaattatatgattttttcaaattatt 11831441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 19213862 - 19213812
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| |||||||||| |||||||||||||||||||||||| ||||||||    
T  19213862 cgacaccgacacttgtatttacactgcattatgtgattttttaaaattatt 19213812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 25481953 - 25481911
Alignment:
Q  169 acacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  25481953 acacttgtaattacactgaattatgtgattttttcaaattatt 25481911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 27945104 - 27945050
Alignment:
Q  157 gacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||| ||||||||||    
T  27945104 gacacgacaccgacacttgtaattacactgaattatgtaattttctcaaattatt 27945050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 35862070 - 35861973
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtc---gtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaa 205  Q
    |||| |||||||||||||||||||||||||||||||   ||||||||        |||||| |||||||  ||||||| || ||||||||||||||||||    
T  35862070 ctatgaagcacggacactcctcggattaggcgtgtcctcgtgtccga--------cgacacagacacttacaattacattgaattatgtgattttttcaa 35861979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 32094014 - 32094071
Alignment:
Q  155 ccgacacgacactgacacttgtaattacactgcattatgtga-ttttttcaaattatt 211  Q
    |||||||||||| |||| |||||||||||||| ||||||||| |||||||||||||||    
T  32094014 ccgacacgacaccgacatttgtaattacactgaattatgtgatttttttcaaattatt 32094071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 7058504 - 7058435
Alignment:
Q  140 gtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||| |||||||||  |||||||||||  |||||||||||||||||| ||||  ||||||||||||||||||    
T  7058504 gtgttgtgtccgat--cgacacgacaccaacacttgtaattacactgaattacatgattttttcaaattatt 7058435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 13300487 - 13300419
Alignment:
Q  143 tcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||| ||||||| ||||| || ||| |||||||||||| ||||| ||||||||||||||||||    
T  13300487 tcgtgttcgacaccgacatgacaccgagactggtaattacactgaattatatgattttttcaaattatt 13300419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 13770756 - 13770700
Alignment:
Q  155 ccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||  ||||||||||||||||||| ||||||| ||||||| ||||||||    
T  13770756 ccgacacgacaacgacacttgtaattacactgaattatgtaatttttttaaattatt 13770700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 21560569 - 21560521
Alignment:
Q  154 accgacacgacactgacacttgtaattacactgcattatgtgatttttt 202  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||||||||    
T  21560569 accgatacgacaccgacacttgtaattacactgaattatgtgatttttt 21560521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 5548741 - 5548686
Alignment:
Q  155 ccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattat 210  Q
    |||||||||||||||||| | ||||||||||| ||||| ||||||| |||||||||    
T  5548741 ccgacacgacactgacacatataattacactgaattatttgattttctcaaattat 5548686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 12843171 - 12843225
Alignment:
Q  157 gacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||||| |||||||||| || ||||||| ||||| ||||||||||    
T  12843171 gacacgacactgacacatgtaattacattgaattatgtaattttatcaaattatt 12843225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 18013070 - 18013124
Alignment:
Q  157 gacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||||| | ||||||||||| ||||||| ||||||| ||||||||    
T  18013070 gacacgacactgacacatataattacactgaattatgtaatttttttaaattatt 18013124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 21880211 - 21880161
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||| ||||||| ||||| ||||||||||    
T  21880211 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattatt 21880161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 1885648 - 1885587
Alignment:
Q  145 gtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaa 206  Q
    |||||||| ||| ||||||||| ||||||||| |||||| || ||||||| |||||||||||    
T  1885648 gtgtccgacaccaacacgacaccgacacttgtgattacattgaattatgtcattttttcaaa 1885587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 11061077 - 11061126
Alignment:
Q  162 gacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||| |||||||||||||| |||  ||||||||||||||||||||||||    
T  11061077 gacaccgacacttgtaattatactaaattatgtgattttttcaaattatt 11061126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 6028706 - 6028634
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||| ||| || |||||||||| |||| ||||||||||| |  ||||||| || |||||||||||||    
T  6028706 cgtgtcgtgttcgacactgacacgacaccgacatttgtaattacattaaattatgttatattttcaaattatt 6028634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 9933353 - 9933284
Alignment:
Q  140 gtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||| |||||||||||||||||||   ||| |  |||| | ||||||||||||||||||||||    
T  9933353 gtgtcgtgtccgacaccgacacgacactgacac--ataagtttactgaaatatgtgattttttcaaattatt 9933284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 11890913 - 11890969
Alignment:
Q  155 ccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||  |||||  ||||||||||| ||||| ||||||||||||||||||    
T  11890913 ccgacacgacacctacactcataattacactgaattatatgattttttcaaattatt 11890969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 26329360 - 26329432
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||| || ||||||||||| | ||||| | ||||||||||| ||| |||| |||| ||||||||||    
T  26329360 cgtgtcgtgtctgacaccgacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattatt 26329432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 144
Target Start/End: Original strand, 5409771 - 5409806
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtc 144  Q
    |||| |||||||||||||||||||||||||||||||    
T  5409771 ctatgaagcacggacactcctcggattaggcgtgtc 5409806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 19992061 - 19992010
Alignment:
Q  160 acgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||| ||||||| ||||||||||| | ||||||||||| ||||||||||    
T  19992061 acgacaccgacacttataattacactgaaatatgtgattttctcaaattatt 19992010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 22602705 - 22602756
Alignment:
Q  156 cgacacgacactgacacttgtaattacactgcattatgtgattttttcaaat 207  Q
    ||||||||||| ||||| | ||||||||||| ||||||||||||| ||||||    
T  22602705 cgacacgacaccgacacatataattacactgaattatgtgattttctcaaat 22602756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 144
Target Start/End: Original strand, 29763129 - 29763164
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtc 144  Q
    |||| |||||||||||||||||||||||||||||||    
T  29763129 ctatgaagcacggacactcctcggattaggcgtgtc 29763164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 8234205 - 8234155
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| | ||||||||| ||||||| ||||||| ||||||||||||||||    
T  8234205 cgacaccggcacttgtaactacactgaattatgttattttttcaaattatt 8234155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 211
Target Start/End: Complemental strand, 11700898 - 11700812
Alignment:
Q  120 ggacactcctcggattaggcgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||||||| |||||   |||||| ||||| || |||| ||||| |  ||||||| || ||||||||||||| ||||||||||    
T  11700898 ggacactcctcggattagccgtgt---gtccgacaccgagacaacacagacacat--aattacattgaattatgtgattttgtcaaattatt 11700812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 28155629 - 28155579
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||| | ||||||| ||||| ||||||||||    
T  28155629 cgacaccgacacttgtaattacaccgaattatgtaattttctcaaattatt 28155579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 143
Target Start/End: Complemental strand, 30813916 - 30813882
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgt 143  Q
    |||| ||||||||||||||||||||||||||||||    
T  30813916 ctatgaagcacggacactcctcggattaggcgtgt 30813882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 10042999 - 10042946
Alignment:
Q  158 acacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||||||| ||||||| ||  ||||||||| ||| ||||||||||    
T  10042999 acacgacactgacacttataattacgctaaattatgtgaatttatcaaattatt 10042946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 23191954 - 23191905
Alignment:
Q  162 gacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||| || ||||||||||||| | ||||||||||| ||||||||||    
T  23191954 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattatt 23191905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 42720891 - 42720940
Alignment:
Q  162 gacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||| | |||||||| |  ||||||||||||||||||||||||    
T  42720891 gacactgacacatataattacatttaattatgtgattttttcaaattatt 42720940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 144
Target Start/End: Complemental strand, 1433583 - 1433543
Alignment:
Q  104 acattctataaagcacggacactcctcggattaggcgtgtc 144  Q
    |||| |||| |||||||||||||||||||||||| ||||||    
T  1433583 acatgctatgaagcacggacactcctcggattagacgtgtc 1433543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 6630890 - 6630962
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||| |||||||| ||| ||||||||  ||||| | ||||||||||| |||| |||| ||| ||||||||||    
T  6630890 cgtgttgtgtccgacaccaacacgacatcgacacatataattacactgaattaagtgactttctcaaattatt 6630962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 202
Target Start/End: Original strand, 13557750 - 13557782
Alignment:
Q  170 cacttgtaattacactgcattatgtgatttttt 202  Q
    ||||||||||||||||| |||||||||||||||    
T  13557750 cacttgtaattacactgaattatgtgatttttt 13557782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 16341561 - 16341505
Alignment:
Q  155 ccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||| | ||| | ||||||||||  ||||||||||||| ||||||||||    
T  16341561 ccgacacgacaccggcacatataattacacttaattatgtgattttctcaaattatt 16341505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 144
Target Start/End: Complemental strand, 21880272 - 21880236
Alignment:
Q  108 tctataaagcacggacactcctcggattaggcgtgtc 144  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  21880272 tctatgaagcacggacacttctcggattaggcgtgtc 21880236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 144
Target Start/End: Complemental strand, 24339773 - 24339737
Alignment:
Q  108 tctataaagcacggacactcctcggattaggcgtgtc 144  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  24339773 tctatgaagcacgggcactcctcggattaggcgtgtc 24339737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 28973876 - 28973916
Alignment:
Q  104 acattctataaagcacggacactcctcggattaggcgtgtc 144  Q
    |||| |||| |||||||||||| ||||||||||||||||||    
T  28973876 acatgctatgaagcacggacacacctcggattaggcgtgtc 28973916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 48438604 - 48438560
Alignment:
Q  162 gacactgacacttgtaattacactgcattatgtgattttttcaaa 206  Q
    ||||| ||||| |||||||||| || |||||||||||||||||||    
T  48438604 gacaccgacacgtgtaattacattgaattatgtgattttttcaaa 48438560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 2e-26; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 14209194 - 14209122
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  14209194 cgtgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttttaaaattatt 14209122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 14832180 - 14832108
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||    
T  14832180 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacattgagttatgtgattttttcaaattatt 14832108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 4990912 - 4991017
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtc---gtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaa 205  Q
    |||| |||||||||||||||||||||||||||||||   ||||| |||||| ||||||| | ||||||||||||||||||| ||||||| ||||| ||||    
T  4990912 ctatgaagcacggacactcctcggattaggcgtgtccacgtgtctgataccaacacgacgccgacacttgtaattacactgaattatgtaattttctcaa 4991011  T
Q  206 attatt 211  Q
    | ||||    
T  4991012 actatt 4991017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 41961628 - 41961700
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| | || ||||||| |||||||||||||    
T  41961628 cgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaataatgtgatattttcaaattatt 41961700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 1509643 - 1509548
Alignment:
Q  119 cggacactcctcggattaggcgtgtc---gtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||| ||||||||||||    ||||| || ||||| ||||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  1509643 cggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattatt 1509548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 750596 - 750668
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||  | |||||||||| |||||||||||||    
T  750596 cgtgtcgtgtccgataccgacacgacaccgacacttgtaattgcagcgaattatgtgatattttcaaattatt 750668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 4987269 - 4987341
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||| | ||||||||| |||  |||||||||||||||||| ||||||||||||||||||||||||    
T  4987269 cgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaattatgtgattttttcaaattatt 4987341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 114 - 211
Target Start/End: Complemental strand, 34910431 - 34910326
Alignment:
Q  114 aagcacggacactcctcggattaggcgtgtcg--------tgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaa 205  Q
    |||||||||||||||||||||||| ||||||         ||||||| ||||| ||||||| ||| ||||||||||||||| ||||||||||||||||||    
T  34910431 aagcacggacactcctcggattagacgtgtcccggtgtcatgtccgacaccgatacgacaccgactcttgtaattacactgaattatgtgattttttcaa 34910332  T
Q  206 attatt 211  Q
    ||||||    
T  34910331 attatt 34910326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 49651766 - 49651836
Alignment:
Q  140 gtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||| | |||||||||||| |||||||||||||||| || ||||||||||||||||||||||||    
T  49651766 gtgtcgtgtccggt-ccgacacgacaccgacacttgtaattacagtgaattatgtgattttttcaaattatt 49651836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 15796272 - 15796344
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||| |||||||| ||| ||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||    
T  15796272 cgtgttgtgtccgacacctacacgacaccgacaattgtaattacactgaattatatgattttttcaaattatt 15796344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 28918062 - 28918010
Alignment:
Q  159 cacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  28918062 cacgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 28918010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 10268487 - 10268536
Alignment:
Q  162 gacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  10268487 gacactgacacttgtaattacactaaattatgtgattttttcaaattatt 10268536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 14216973 - 14216901
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||| ||  ||||||||| ||||||||||||||||||| ||||| |||| |||| ||||||||    
T  14216973 cgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaattatatgatattttaaaattatt 14216901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 14223102 - 14223030
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||| ||  ||||||||| ||||||||||||||||||| ||||| |||| |||| ||||||||    
T  14223102 cgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaattatatgatattttaaaattatt 14223030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 25948881 - 25948937
Alignment:
Q  155 ccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||  |||||| ||||||||||| ||||||||||||||||||||||||    
T  25948881 ccgacacgacaccaacacttataattacactgaattatgtgattttttcaaattatt 25948937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 28812592 - 28812524
Alignment:
Q  143 tcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||| || ||| ||||||||| ||||||||||| ||||||| |||||||||||| |||||||||||    
T  28812592 tcgtgtctgacaccaacacgacaccgacacttgtaactacactgaattatgtgatttcttcaaattatt 28812524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 3163971 - 3164075
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtc---gtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaa 205  Q
    |||| ||||| |||||||||||| ||||||||||||   ||||| || | ||||||||||   ||||||||  |||||||| ||||||||||||||||||    
T  3163971 ctatgaagcatggacactcctcgaattaggcgtgtctcggtgtcggaca-cgacacgacatcaacacttgttcttacactgaattatgtgattttttcaa 3164069  T
Q  206 attatt 211  Q
    ||||||    
T  3164070 attatt 3164075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 11610629 - 11610530
Alignment:
Q  108 tctataaagcacggacactcctcggattaggcgtgtcgtgtccgataccg-acacgacactgacacttgtaattacactgcattatgtgattttttcaaa 206  Q
    ||||| ||||||||||||||||| |||||||||||||    |||||  || |||||||  |||||||||||| ||||||| ||||||||||||||| |||    
T  11610629 tctatgaagcacggacactcctcagattaggcgtgtc----ccgatgtcggacacgact-tgacacttgtaactacactgaattatgtgatttttttaaa 11610535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 14747655 - 14747570
Alignment:
Q  130 cggattaggcgtgtc---gtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgatt-ttttcaaattatt 211  Q
    |||||||||||||||   ||||| ||||| |||||||||| ||| ||||||||||||||  ||||||||||| |||||||||||||    
T  14747655 cggattaggcgtgtctcggtgtcggatacagacacgacacggacccttgtaattacactaaattatgtgatttttttcaaattatt 14747570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 168 - 211
Target Start/End: Complemental strand, 26508162 - 26508119
Alignment:
Q  168 gacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  26508162 gacacttgtaattacactgaattatgtgattttttcaaattatt 26508119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 10955011 - 10954961
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||| ||||||||| ||||||||||||||||||||||||    
T  10955011 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattatt 10954961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 34185119 - 34185173
Alignment:
Q  157 gacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||| ||||||||    
T  34185119 gacacgacaccgacacttgtaattacactgaattgtgtgattttttgaaattatt 34185173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 51206353 - 51206403
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| |||||||||| |||||||| ||||||||||||||||||||||||    
T  51206353 cgacaccgacacttgtatttacactgaattatgtgattttttcaaattatt 51206403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 55401134 - 55401084
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  55401134 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattatt 55401084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 8587021 - 8587069
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaatta 209  Q
    |||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  8587021 cgacaccgacacttgtaattacacttaattatgtgattttttcaaatta 8587069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 14829766 - 14829699
Alignment:
Q  143 tcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||| | ||||||||||||| |||||||||||||||  || |||||||||| |||||||||||||    
T  14829766 tcgtgtccaacaccgacacgacaccgacacttgtaattaccatgaattatgtgat-ttttcaaattatt 14829699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 20503522 - 20503474
Alignment:
Q  163 acactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||| ||||||||||||||||||| ||||||| ||||||||||||||||    
T  20503522 acaccgacacttgtaattacactgaattatgtcattttttcaaattatt 20503474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 21256984 - 21257036
Alignment:
Q  159 cacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||| || |||||||||||||| |||| ||||||||||||||||||||||||    
T  21256984 cacgataccgacacttgtaattatactgaattatgtgattttttcaaattatt 21257036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 1550220 - 1550149
Alignment:
Q  140 gtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||  | || |||||||||||||||| | ||||||||||| ||  ||||||||||||||||||||    
T  1550220 gtgtcgtgtcgaacactgacacgacactgacacctataattacactgaatagtgtgattttttcaaattatt 1550149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 211
Target Start/End: Complemental strand, 3610741 - 3610642
Alignment:
Q  114 aagcacggacactcctcggattaggcgtgtc-gtgtccgataccgacacg-acactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| |||||| ||| ||||||||||||| |||||||| ||||| ||| |||  |||||| ||||||||||||  |||||| ||||||| ||||||||    
T  3610741 aagcacagacactactcagattaggcgtgtccgtgtccgacaccgatacggacaacgacactggtaattacactgagttatgttatttttttaaattatt 3610642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 16789092 - 16789021
Alignment:
Q  140 gtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||| ||||||| || ||||||||||  |||||| ||||||||||| ||||| ||||||||| ||||||||    
T  16789092 gtgtcatgtccgacactgacacgacaccaacacttataattacactgaattatatgatttttttaaattatt 16789021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 25775568 - 25775517
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgatt-ttttcaaattatt 211  Q
    |||||| ||||||||||||||||||| ||||||||||| |||||||||||||    
T  25775568 cgacaccgacacttgtaattacactgaattatgtgattattttcaaattatt 25775517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 7928509 - 7928459
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||| | ||||||||||| ||||||||||||||||||||||||    
T  7928509 cgacaccgacacatataattacactgaattatgtgattttttcaaattatt 7928459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 21479177 - 21479127
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| |||||| |||||||||||| ||| ||||||||||||||||||||    
T  21479177 cgacaccgacactagtaattacactgaattgtgtgattttttcaaattatt 21479127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 27505309 - 27505255
Alignment:
Q  157 gacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||| ||||||||||||||||||  ||||||||||||||  ||||||||    
T  27505309 gacacgacaccgacacttgtaattacacttaattatgtgatttttaaaaattatt 27505255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 211
Target Start/End: Original strand, 8039820 - 8039885
Alignment:
Q  146 tgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||| ||||||||||||| ||||| | ||||||||||| ||||| | ||||| ||||||||||    
T  8039820 tgtccgacaccgacacgacaccgacacatataattacactgaattatataattttctcaaattatt 8039885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 144
Target Start/End: Complemental strand, 8842449 - 8842413
Alignment:
Q  108 tctataaagcacggacactcctcggattaggcgtgtc 144  Q
    ||||| |||||||||||||||||||||||||||||||    
T  8842449 tctatgaagcacggacactcctcggattaggcgtgtc 8842413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 9800109 - 9800049
Alignment:
Q  151 gataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||||| |||||||  |||||||| | ||||||| ||||| ||||||||||    
T  9800109 gataccgacacgacaccgacacttacaattacacggaattatgtaattttctcaaattatt 9800049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 144
Target Start/End: Complemental strand, 20503585 - 20503549
Alignment:
Q  108 tctataaagcacggacactcctcggattaggcgtgtc 144  Q
    ||||| |||||||||||||||||||||||||||||||    
T  20503585 tctatgaagcacggacactcctcggattaggcgtgtc 20503549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 55213043 - 55212972
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||| ||| |||| |||||||| |||| ||||||||||||| ||||  ||||||||||||||| ||||||||    
T  55213043 cgtgttgtgcccgacaccgacac-acaccgacacttgtaattgcactaaattatgtgattttttaaaattatt 55212972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 11313795 - 11313850
Alignment:
Q  156 cgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||| |||| | ||||||||||  ||||||||||||| ||||||||||    
T  11313795 cgacacgacactaacacatataattacactaaattatgtgattttctcaaattatt 11313850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 16192729 - 16192800
Alignment:
Q  140 gtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||| || ||||||||||||   |||| | ||||||||||| ||||||| ||||| ||||||||||    
T  16192729 gtgtcgtgtctgacaccgacacgacatcaacacatataattacactgaattatgttattttctcaaattatt 16192800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 144
Target Start/End: Original strand, 34185052 - 34185087
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtc 144  Q
    |||| |||||||||||||||||||||||||||||||    
T  34185052 ctatgaagcacggacactcctcggattaggcgtgtc 34185087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 211
Target Start/End: Original strand, 35994745 - 35994787
Alignment:
Q  168 gacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||    
T  35994745 gacacttgtaattacactgaattatgtga-tttttcaaattatt 35994787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 144
Target Start/End: Complemental strand, 55401194 - 55401159
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtc 144  Q
    |||| |||||||||||||||||||||||||||||||    
T  55401194 ctatgaagcacggacactcctcggattaggcgtgtc 55401159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 8383316 - 8383266
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||| ||||||||||| ||||| ||||||| ||||||||||    
T  8383316 cgacaccgacacttataattacactgaattatatgattttctcaaattatt 8383266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 8593196 - 8593154
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttc 203  Q
    |||||| |||||||||||||| |||| ||||||||||||||||    
T  8593196 cgacaccgacacttgtaattatactgaattatgtgattttttc 8593154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 144
Target Start/End: Original strand, 8789493 - 8789523
Alignment:
Q  114 aagcacggacactcctcggattaggcgtgtc 144  Q
    |||||||||||||||||||||||||||||||    
T  8789493 aagcacggacactcctcggattaggcgtgtc 8789523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 211
Target Start/End: Complemental strand, 14979224 - 14979190
Alignment:
Q  177 aattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||| ||||||||||||||||||||||||    
T  14979224 aattacactgaattatgtgattttttcaaattatt 14979190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 144
Target Start/End: Complemental strand, 21861697 - 21861659
Alignment:
Q  106 attctataaagcacggacactcctcggattaggcgtgtc 144  Q
    ||||||| ||||||||||||||||||||||||| |||||    
T  21861697 attctatgaagcacggacactcctcggattaggtgtgtc 21861659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 26492205 - 26492255
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| || |||||||||||||||| ||| | ||||||||||||||||||    
T  26492205 cgacaccgatacttgtaattacactgaattgtatgattttttcaaattatt 26492255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 39002094 - 39002044
Alignment:
Q  158 acacgacactgacacttgtaattacactgcattatgtgattttttcaaatt 208  Q
    ||||||||||||||  | |||||||| || |||||||||||||||||||||    
T  39002094 acacgacactgacatatataattacattgaattatgtgattttttcaaatt 39002044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 39756299 - 39756245
Alignment:
Q  157 gacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||| |||||||||||||| | |  ||||||||||||||| ||||||||    
T  39756299 gacacgacaccgacacttgtaattatattaaattatgtgatttttttaaattatt 39756245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 49505154 - 49505204
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||| | ||||||||||  ||||||||||||| ||||||||||    
T  49505154 cgacactgacacatataattacactaaattatgtgattttctcaaattatt 49505204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 15314867 - 15314924
Alignment:
Q  152 ataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaatta 209  Q
    ||||| |||||||||  |||| | ||||||||||  ||||||||||||||||||||||    
T  15314867 ataccaacacgacaccaacacatataattacactaaattatgtgattttttcaaatta 15314924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 15812801 - 15812871
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||| ||| ||||||||| | ||  | |||||||||||  |||||||||||| ||||||||||    
T  15812801 cgtgtcgtgtccgacaccaacacgacaccggca--tataattacactgagttatgtgattttctcaaattatt 15812871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 17005616 - 17005669
Alignment:
Q  158 acacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||| |||| ||||||| ||||||||||| ||||| ||||||| ||||||||||    
T  17005616 acacaacaccgacacttataattacactgaattatatgattttatcaaattatt 17005669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 17276791 - 17276742
Alignment:
Q  154 accgacacgacactgacacttgtaattacactgcattatgtgattttttc 203  Q
    |||||||||||||||||||||||||||| ||   |||||||| |||||||    
T  17276791 accgacacgacactgacacttgtaattataccaaattatgtgtttttttc 17276742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 1e-24; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 25566950 - 25566850
Alignment:
Q  108 tctataaagcacggacactcctcggattaggcgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaat 207  Q
    ||||| |||||| ||||||||||||||||||||||||  |   || ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  25566950 tctatgaagcacagacactcctcggattaggcgtgtcccg---gacaccaacacgacaccgacacttgtaattacactgaattatgtgattttttcaaat 25566854  T
Q  208 tatt 211  Q
    ||||    
T  25566853 tatt 25566850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 2572034 - 2572106
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||| || |||||||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  2572034 cgtgtcgtgtccgacacagacacgacaccgacacttgtaattacactaaattatgtgattttttcaaattatt 2572106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 22652055 - 22651985
Alignment:
Q  141 tgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||| ||||||||||||| |||||||||||||| | || ||||||||||||||||||||||||    
T  22652055 tgtcgtgtccgacaccgacacgacaccgacacttgtaattatattgaattatgtgattttttcaaattatt 22651985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 13436909 - 13437014
Alignment:
Q  108 tctataaagcacggacactcctcggattaggcgtgtc---gtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttca 204  Q
    ||||| |||||| ||||||||| ||||||||||||||   ||||| || ||||||||||||| ||||||||| |||||  || |||||||||||||||||    
T  13436909 tctatgaagcacagacactccttggattaggcgtgtcccggtgtc-gacaccgacacgacaccgacacttgttattaccatgaattatgtgattttttca 13437007  T
Q  205 aattatt 211  Q
    |||||||    
T  13437008 aattatt 13437014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 15816107 - 15816179
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||| ||| ||||||||| ||||||| ||||||||||  ||||||||||||||||||||||||    
T  15816107 cgtgtcgtgtccgacaccaacacgacaccgacacttataattacactaaattatgtgattttttcaaattatt 15816179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 30271287 - 30271337
Alignment:
Q  157 gacacgacactgacacttgtaattacactgcattatgtgattttttcaaat 207  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  30271287 gacacgacactggcacttgtaattacactgcattatgtgattttttcaaat 30271337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 29510285 - 29510354
Alignment:
Q  142 gtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||| |||||||| |||| |||||||||||||| |||| ||| ||||||||||||||||||||    
T  29510285 gtcgtgtccgacaccgacactacaccgacacttgtaattatactgaattttgtgattttttcaaattatt 29510354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 8343086 - 8342981
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtc---gtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaa 205  Q
    |||| |||||| ||||||| ||||||||||||||||   ||||| || ||    ||||||| ||||||||||||||||||  ||||||||||||||||||    
T  8343086 ctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacatgtacgacaccgacacttgtaattacactaaattatgtgattttttcaa 8342987  T
Q  206 attatt 211  Q
    ||||||    
T  8342986 attatt 8342981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 8343376 - 8343325
Alignment:
Q  160 acgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  8343376 acgacactgacacttgtaattacactaaattatgtgattttttcaaattatt 8343325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 4948711 - 4948661
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  4948711 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 4948661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 29447090 - 29447160
Alignment:
Q  141 tgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||| ||||||| ||||| |||||||||| ||||| || ||||||||||||| ||||||||||    
T  29447090 tgtcgtgtccgacaccgacatgacaccgacacttgtagttacattgaattatgtgattttctcaaattatt 29447160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 21465493 - 21465421
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||| || ||||||||||  |||||||||||||||  | ||||| ||||||||||||||||||    
T  21465493 cgtgtcgtgtccgacactgacacgacaccaacacttgtaattacatcgaattatatgattttttcaaattatt 21465421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 17468503 - 17468558
Alignment:
Q  156 cgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||  |||||||||||||||| |||||||||||||||| |||||||||    
T  17468503 cgacacgacaccaacacttgtaattacaccgcattatgtgatttttacaaattatt 17468558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 139 - 202
Target Start/End: Original strand, 24727730 - 24727793
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgatttttt 202  Q
    |||||| ||| ||||||||||| |||||| ||||||| |||||||||||||||||| |||||||    
T  24727730 cgtgtcatgttcgataccgacatgacactaacacttgaaattacactgcattatgtaatttttt 24727793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 27067280 - 27067344
Alignment:
Q  141 tgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaat 207  Q
    |||||||||||| ||||||||||||||||||||||||||||||  | ||||||| ||||| ||||||    
T  27067280 tgtcgtgtccgacaccgacacgacactgacacttgtaattaca--gaattatgtaattttctcaaat 27067344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 28745578 - 28745507
Alignment:
Q  140 gtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||| ||||||||||||  |||| ||||| ||||| || ||||||||| ||||||||||||||    
T  28745578 gtgtcgtgtccgacaccgacacgacatcgacatttgtagttacattgaattatgtgaatttttcaaattatt 28745507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 20873128 - 20873078
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  20873128 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattatt 20873078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 30077387 - 30077437
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||| |||||||||| |||||||||||||    
T  30077387 cgacacggacacttgtaattacactgaattatgtgatgttttcaaattatt 30077437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 4673406 - 4673475
Alignment:
Q  142 gtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||| | | ||| |||||||| |||||||||||||||| ||| | ||||||||||||||||||    
T  4673406 gtcgtgtccgacatcaacaagacactgatacttgtaattacactgaattttatgattttttcaaattatt 4673475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 22197743 - 22197792
Alignment:
Q  162 gacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  22197743 gacactgacacttgtaattacactaaattatgtgaatttttcaaattatt 22197792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 24362179 - 24362252
Alignment:
Q  139 cgtgtcgtgtccg-ataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||| | |||||||||||| |||||| | ||||||||||| ||||||||||| | ||||||||||    
T  24362179 cgtgtcgtgtccggacaccgacacgacattgacacatataattacactgaattatgtgattctctcaaattatt 24362252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 31514973 - 31514932
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtcgtgtcc 150  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  31514973 ctatgaagcacggacactcctcggattaggcgtgtcgtgtcc 31514932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 40332248 - 40332200
Alignment:
Q  163 acactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||| ||||||||||||||||||| ||||||||||||| ||||||||||    
T  40332248 acaccgacacttgtaattacactgaattatgtgattttctcaaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 4611614 - 4611543
Alignment:
Q  140 gtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||||||||||||  ||| || || | ||||||||||| ||||||| ||||| ||||||||||    
T  4611614 gtgtcgtgtccgataccgacacagcaccgagacatataattacactgaattatgttattttctcaaattatt 4611543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 211
Target Start/End: Original strand, 41831947 - 41831990
Alignment:
Q  168 gacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||| |||||||| ||||||||||||||||||||||||    
T  41831947 gacacttgtagttacactgaattatgtgattttttcaaattatt 41831990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 3025610 - 3025560
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||| | ||||||||||| ||||||||||||| ||||||||||    
T  3025610 cgacactgacacctataattacactgaattatgtgattttctcaaattatt 3025560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 11927066 - 11927136
Alignment:
Q  141 tgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||  || ||| ||||||||| ||||| | ||||||||||| ||||||||||||| ||||||||||    
T  11927066 tgtcgtgtatgacaccaacacgacaccgacacatataattacactgaattatgtgattttatcaaattatt 11927136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 36450762 - 36450804
Alignment:
Q  169 acacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||||||| ||| ||||||||||||||||||||    
T  36450762 acacttgtaattacactgaattctgtgattttttcaaattatt 36450804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 4298887 - 4298936
Alignment:
Q  162 gacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||| |||||||||||||||| |  ||||||||||||||||||||||||    
T  4298887 gacaccgacacttgtaattacattaaattatgtgattttttcaaattatt 4298936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 211
Target Start/End: Complemental strand, 18407771 - 18407728
Alignment:
Q  168 gacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||||||||| |||||||||||||||  |||||||    
T  18407771 gacacttgtaattacactgaattatgtgatttttttgaattatt 18407728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 144
Target Start/End: Original strand, 31109462 - 31109493
Alignment:
Q  113 aaagcacggacactcctcggattaggcgtgtc 144  Q
    ||||||||||||||||||||||||||||||||    
T  31109462 aaagcacggacactcctcggattaggcgtgtc 31109493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 22596045 - 22596003
Alignment:
Q  169 acacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||||||| ||||||| ||||||| ||||||||    
T  22596045 acacttgtaattacactgaattatgttatttttttaaattatt 22596003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 24613579 - 24613530
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||  |||||||||| |||||||||||||    
T  24613579 cgacaccgacacttgtaattacacttaattatgtgat-ttttcaaattatt 24613530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 24669492 - 24669442
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||| ||||||| ||||  ||||||||||    
T  24669492 cgacaccgacacttgtaattacactgaattatgtaatttcctcaaattatt 24669442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 144
Target Start/End: Original strand, 11927013 - 11927050
Alignment:
Q  107 ttctataaagcacggacactcctcggattaggcgtgtc 144  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  11927013 ttctatgaagcacggacactcatcggattaggcgtgtc 11927050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 11944727 - 11944674
Alignment:
Q  158 acacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||| ||||| | |||||||||||  |||||||||||| ||||||||||    
T  11944727 acacgacaccgacacatataattacactgagttatgtgattttatcaaattatt 11944674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 20679396 - 20679445
Alignment:
Q  162 gacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||| ||||||| ||||||||||| | ||||||||||| ||||||||||    
T  20679396 gacaccgacacttataattacactgaactatgtgattttctcaaattatt 20679445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 142
Target Start/End: Original strand, 22197671 - 22197704
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtg 142  Q
    |||||||||||||||||||||| |||||||||||    
T  22197671 ctataaagcacggacactcctcagattaggcgtg 22197704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 200
Target Start/End: Original strand, 26902153 - 26902214
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgatttt 200  Q
    |||||||||||||| ||  | ||||||| ||||| | ||||||||||| |||||||||||||    
T  26902153 cgtgtcgtgtccgacactcatacgacaccgacacatataattacactgaattatgtgatttt 26902214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 31557054 - 31557006
Alignment:
Q  162 gacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||| || |||||||||||||||| |||||||||| |||||||||||||    
T  31557054 gacaccgaaacttgtaattacactgaattatgtgat-ttttcaaattatt 31557006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 30271255 - 30271287
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatg 193  Q
    |||||| ||||||||||||||||||||||||||    
T  30271255 cgacaccgacacttgtaattacactgcattatg 30271287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 34451032 - 34451076
Alignment:
Q  156 cgacacgacactgacacttgtaattacactgcattatgtgatttt 200  Q
    ||||||||||| ||||| | ||||||||||||||| |||||||||    
T  34451032 cgacacgacaccgacacatataattacactgcattttgtgatttt 34451076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 36934747 - 36934679
Alignment:
Q  143 tcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||| ||| ||||| |  |||| | |||||||| || |||||||||||||||| |||||||    
T  36934747 tcgtgtccgatatcgaaacgacgccaacacatataattacaatgaattatgtgattttttcgaattatt 36934679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 5e-24; HSPs: 59)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 8365497 - 8365569
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||| |||||||||||||    
T  8365497 cgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaattatgtgatattttcaaattatt 8365569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 16766778 - 16766706
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||| |||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  16766778 cgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 16766706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 5970087 - 5970158
Alignment:
Q  140 gtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||| |||||||||||||  ||| |||||||||||||| ||||||||||||||||||||||||    
T  5970087 gtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgattttttcaaattatt 5970158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 145 - 211
Target Start/End: Original strand, 9107354 - 9107420
Alignment:
Q  145 gtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||| ||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||    
T  9107354 gtgtccgacaccgacacgacaccgacacttgtaattacactgaattttgtgattttttcaaattatt 9107420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 31384982 - 31384929
Alignment:
Q  158 acacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31384982 acacgacactgacacttgtaattacactgaattatgtgattttttcaaattatt 31384929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 12696389 - 12696333
Alignment:
Q  155 ccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  12696389 ccgacacgacactgacacttgtaattacactgaattatgtaattttttcaaattatt 12696333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 10770670 - 10770724
Alignment:
Q  157 gacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  10770670 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 10770724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 118 - 211
Target Start/End: Original strand, 21395262 - 21395357
Alignment:
Q  118 acggacactcctcggattaggcgtgtc---gtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||| ||||||||||||||   |||||||| || |||||||||| ||||||||||||||||||  ||||||| ||||| ||||||||||    
T  21395262 acggacactccttggattaggcgtgtcctggtgtccgacactgacacgacaccgacacttgtaattacactaaattatgt-attttctcaaattatt 21395357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 8714060 - 8713988
Alignment:
Q  140 gtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgatt-ttttcaaattatt 211  Q
    ||||||||||||| |||||||||||||  ||| |||||||||||||| ||||||||||| |||||||||||||    
T  8714060 gtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgatttttttcaaattatt 8713988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 9522972 - 9522900
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||  ||||| |||||||| |||| ||||||||||||||||||| ||||||||||||||| ||||||||    
T  9522972 cgtgtcggatccgacaccgacacaacaccgacacttgtaattacactgaattatgtgatttttttaaattatt 9522900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 168 - 211
Target Start/End: Complemental strand, 31959211 - 31959168
Alignment:
Q  168 gacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  31959211 gacacttgtaattacactgcattatgtgattttttcaaattatt 31959168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 34595193 - 34595143
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  34595193 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 34595143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 200
Target Start/End: Original strand, 16488568 - 16488629
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgatttt 200  Q
    |||||||||||||| ||||||||||||| ||||| | ||||||||||||||| |||||||||    
T  16488568 cgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgatttt 16488629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 17435280 - 17435208
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||| | |||||  ||||| |||||||||||||||||| ||||||| ||||||| ||||||||    
T  17435280 cgtgtcgtgtccgacatcgacaaaacactaacacttgtaattacactgaattatgtaattttttaaaattatt 17435208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 7801156 - 7801206
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||| ||| ||||||||||||||||||||||||    
T  7801156 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattatt 7801206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 7977830 - 7977880
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||| ||||||| ||||||||||||||||    
T  7977830 cgacaccgacacttgtaattacactgaattatgtaattttttcaaattatt 7977880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 211
Target Start/End: Original strand, 9911479 - 9911579
Alignment:
Q  106 attctataaagcacggacactcctcggattaggcgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattt-tttca 204  Q
    ||||||| ||||| | ||||||||||||||||||||||| ||   | |   |||||||||| ||||||||||||||||||| |||||||||||| ||| |    
T  9911479 attctatgaagcatgaacactcctcggattaggcgtgtcctg---gtt---gacacgacaccgacacttgtaattacactgaattatgtgatttctttta 9911572  T
Q  205 aattatt 211  Q
    |||||||    
T  9911573 aattatt 9911579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 10339104 - 10339174
Alignment:
Q  140 gtgtcgtgtccgataccgacacgacactgacacttgtaatt-acactgcattatgtgattttttcaaatta 209  Q
    ||||||||||||| ||||||||| ||||||||| | ||||| |||||| ||||||||||||| ||||||||    
T  10339104 gtgtcgtgtccgacaccgacacggcactgacacatataattaacactgaattatgtgattttctcaaatta 10339174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 28715354 - 28715304
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||| ||||||| ||||||||||||||||    
T  28715354 cgacaccgacacttgtaattacactgaattatgtcattttttcaaattatt 28715304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 200
Target Start/End: Complemental strand, 4388200 - 4388105
Alignment:
Q  108 tctataaagcacggacactcctcggattaggcgtgtc---gtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgatttt 200  Q
    ||||| |||||| |||||| ||||||| |||||||||   ||||| || |||| |||||||||||||| | ||||||| ||| |||||||||||||    
T  4388200 tctatgaagcacagacacttctcggataaggcgtgtcctcgtgtcagacaccgccacgacactgacacatataattaccctggattatgtgatttt 4388105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 211
Target Start/End: Complemental strand, 7930413 - 7930314
Alignment:
Q  116 gcacggacactcctcggattaggcgtgtc---gtgtccgatacc-gacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||| |||||||||| ||||||||||||   ||||| || ||  |||||||||| |||||||| |||| ||||  ||||||||||||||||||||||||    
T  7930413 gcacgaacactcctcgaattaggcgtgtcctggtgtcggacacgtgacacgacaccgacacttgaaatttcactaaattatgtgattttttcaaattatt 7930314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 211
Target Start/End: Original strand, 9025450 - 9025544
Alignment:
Q  114 aagcacggacactcctcggattaggcgtgtcgtgtccgataccg-acacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||| |||||||||||||||||    ||| |  || ||||||||| ||||| | ||||||||||| ||||||||||||| ||||||||||    
T  9025450 aagcacggacacttctcggattaggcgtgtc----ccggtgtcggacacgacaccgacacatataattacactgaattatgtgattttctcaaattatt 9025544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 17302638 - 17302565
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgatt-ttttcaaattatt 211  Q
    ||||| |||||  |||| ||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||    
T  17302638 cgtgttgtgtctaatactgacacgacaatgacacttgtaattacattgaattatgtgatttttttcaaattatt 17302565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 16833365 - 16833317
Alignment:
Q  163 acactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||| ||||||||||||||||||| | ||||||||||||||||||||||    
T  16833365 acaccgacacttgtaattacactgaagtatgtgattttttcaaattatt 16833317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 18367916 - 18367856
Alignment:
Q  140 gtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgatttt 200  Q
    |||||||||| || ||||||||||||| ||||| | ||||||||||||||| |||||||||    
T  18367916 gtgtcgtgtctgacaccgacacgacaccgacacatataattacactgcattttgtgatttt 18367856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 211
Target Start/End: Complemental strand, 1681810 - 1681767
Alignment:
Q  168 gacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  1681810 gacacttgtaattacactgaattacgtgattttttcaaattatt 1681767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 403864 - 403914
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| |||||||||| |||||||  ||||||||||||||||||||||||    
T  403864 cgacaccgacacttgtagttacactaaattatgtgattttttcaaattatt 403914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 426514 - 426564
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| |||||||||||||||| |  ||||||||||||||||||||||||    
T  426514 cgacaccgacacttgtaattacatttaattatgtgattttttcaaattatt 426564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 853859 - 853909
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||| ||||  ||||||||||||||||||||||||    
T  853859 cgacaccgacacttgtaattgcacttaattatgtgattttttcaaattatt 853909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 8776981 - 8777023
Alignment:
Q  169 acacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||||||| ||| ||||||||||||||||||||    
T  8776981 acacttgtaattacactgaattttgtgattttttcaaattatt 8777023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 17841589 - 17841639
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| | ||||||||||||||||  ||||||||||||||||||||||||    
T  17841589 cgacaccgtcacttgtaattacactaaattatgtgattttttcaaattatt 17841639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 28152157 - 28152108
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||| |||||||||| |||||||||||||    
T  28152157 cgacaccgacacttgtaattacactgaattatgtgat-ttttcaaattatt 28152108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 17341669 - 17341714
Alignment:
Q  166 ctgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||||||    
T  17341669 ctgacacttataattacactgaattatgtgattttatcaaattatt 17341714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 2117140 - 2117085
Alignment:
Q  155 ccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||| ||||||| ||||| || || ||||||||||||||||||||||||    
T  2117140 ccgacacgacac-gacacttataattgcattgaattatgtgattttttcaaattatt 2117085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 26562765 - 26562701
Alignment:
Q  144 cgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaatt 208  Q
    ||||| ||| ||||||||||||  ||||| | ||||||||||| ||||||||||||| |||||||    
T  26562765 cgtgttcgacaccgacacgacatcgacacatataattacactgaattatgtgattttctcaaatt 26562701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 211
Target Start/End: Original strand, 1191707 - 1191750
Alignment:
Q  168 gacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||||||||| ||| ||||| ||||||||||||||    
T  1191707 gacacttgtaattacactgaattttgtgaatttttcaaattatt 1191750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 144
Target Start/End: Complemental strand, 4878061 - 4878026
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtc 144  Q
    |||| |||||||||||||||||||||||||||||||    
T  4878061 ctatgaagcacggacactcctcggattaggcgtgtc 4878026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 7723199 - 7723300
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtcgtgtccg--ataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaa 206  Q
    |||| ||||||||||||||||||||||||||||   || ||||  | ||||||||||||| || || | ||||||  ||| ||||| ||||||| |||||    
T  7723199 ctatgaagcacggacactcctcggattaggcgt---gtttccgtaacaccgacacgacaccgatacatataattatgctgaattatatgattttctcaaa 7723295  T
Q  207 ttatt 211  Q
    |||||    
T  7723296 ttatt 7723300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 9617510 - 9617443
Alignment:
Q  144 cgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||| ||||  ||||||| ||||| | |||||||| || ||||||||||||| ||||||||||    
T  9617510 cgtgtccgacaccgcgacgacaccgacacatataattacattgaattatgtgattttctcaaattatt 9617443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 211
Target Start/End: Original strand, 16388248 - 16388283
Alignment:
Q  176 taattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||| ||||||||||||||||||||||||    
T  16388248 taattacactgaattatgtgattttttcaaattatt 16388283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 144
Target Start/End: Original strand, 17327590 - 17327625
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtc 144  Q
    |||| |||||||||||||||||||||||||||||||    
T  17327590 ctatgaagcacggacactcctcggattaggcgtgtc 17327625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 4118341 - 4118383
Alignment:
Q  169 acacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||||| |  ||||||||||||||||||||||||    
T  4118341 acacttgtaattacatttaattatgtgattttttcaaattatt 4118383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 6898281 - 6898331
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||  ||||||| |||| |||||||||||    
T  6898281 cgacaccgacacttgtaattacacttaattatgtaatttgttcaaattatt 6898331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 7265593 - 7265643
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||| | ||||||||||| ||||||||||||| ||||||||||    
T  7265593 cgacaccgacacatataattacactgaattatgtgattttctcaaattatt 7265643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 144
Target Start/End: Original strand, 17841534 - 17841564
Alignment:
Q  114 aagcacggacactcctcggattaggcgtgtc 144  Q
    |||||||||||||||||||||||||||||||    
T  17841534 aagcacggacactcctcggattaggcgtgtc 17841564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 19040411 - 19040361
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||| | ||||||||||| ||||||||||||| ||||||||||    
T  19040411 cgacacagacacatataattacactgaattatgtgattttctcaaattatt 19040361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 210
Target Start/End: Original strand, 33340364 - 33340434
Alignment:
Q  140 gtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattat 210  Q
    ||||| ||||||| |||| ||||||| |||||||| |||||||| |  | ||||||||||||| |||||||    
T  33340364 gtgtcctgtccgacaccggcacgacaatgacacttataattacagtaaaatatgtgatttttttaaattat 33340434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 210
Target Start/End: Complemental strand, 35125734 - 35125664
Alignment:
Q  140 gtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattat 210  Q
    ||||| ||||||| |||| ||||||| |||||||| |||||||| |  | ||||||||||||| |||||||    
T  35125734 gtgtcctgtccgacaccggcacgacaatgacacttataattacagtaaaatatgtgatttttttaaattat 35125664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 1700411 - 1700362
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattat 210  Q
    |||||| ||||||| ||||||||||| | ||||||||||||| |||||||    
T  1700411 cgacaccgacacttataattacactgaaatatgtgatttttttaaattat 1700362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 7938174 - 7938125
Alignment:
Q  162 gacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||| ||||||| ||||||||||  ||||| ||||||||||||||||||    
T  7938174 gacaccgacacttataattacactaaattatatgattttttcaaattatt 7938125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 15489733 - 15489782
Alignment:
Q  162 gacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||| |||||||||||||||| || ||| ||| ||||||||||||||||    
T  15489733 gacaccgacacttgtaattacattgaattgtgtaattttttcaaattatt 15489782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 34073340 - 34073397
Alignment:
Q  154 accgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||| ||| | | ||||||||||| |||||| |||||| ||||||||||    
T  34073340 accgacacgacaccgacccatataattacactgaattatgagattttctcaaattatt 34073397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 7151473 - 7151421
Alignment:
Q  159 cacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||  |||| | ||||||||||  ||||||||||||||||||||||||    
T  7151473 cacgacaccaacacatataattacacttaattatgtgattttttcaaattatt 7151421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 144
Target Start/End: Complemental strand, 10842653 - 10842617
Alignment:
Q  108 tctataaagcacggacactcctcggattaggcgtgtc 144  Q
    ||||| |||||||||||||||||||||||| ||||||    
T  10842653 tctatgaagcacggacactcctcggattagccgtgtc 10842617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 16111751 - 16111807
Alignment:
Q  155 ccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||||||| | ||||||||||  ||||||| |||| |||||| ||||    
T  16111751 ccgacacgacactgacacctataattacactaaattatgtaatttattcaaactatt 16111807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 137
Target Start/End: Original strand, 24833168 - 24833208
Alignment:
Q  97 atatgtaacattctataaagcacggacactcctcggattag 137  Q
    |||||| ||||||||| ||||||||||| ||||||||||||    
T  24833168 atatgttacattctattaagcacggacattcctcggattag 24833208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 25010212 - 25010252
Alignment:
Q  171 acttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||| || ||| ||||||||||||||||||||||||    
T  25010212 acttgtaataacgctgaattatgtgattttttcaaattatt 25010252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 25038049 - 25038121
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||| || ||| |||| | || |||| |||||||||||||  ||||||| ||||| ||||||||||    
T  25038049 cgtgtcgtgtcggacaccaacacaataccgacatttgtaattacactaaattatgtaattttctcaaattatt 25038121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 144
Target Start/End: Complemental strand, 34595254 - 34595218
Alignment:
Q  108 tctataaagcacggacactcctcggattaggcgtgtc 144  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  34595254 tctatgaagcacggacactcctcggattaggtgtgtc 34595218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 3828 - 3899
Alignment:
Q  140 gtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  3828 gtgtcgtgtccgacaccaacacgacactgacacttgtaattacactgaattatgtgatttttttaaattatt 3899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 20238 - 20181
Alignment:
Q  154 accgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20238 accgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattatt 20181  T

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Target: chr4 (Bit Score: 52; Significance: 5e-21; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 11596297 - 11596402
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtcg---tgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaa 205  Q
    |||| ||||||||||||||||| |||||||||||||    |||| || |  ||||||||||  |||||||||||||||||| ||||||||||||||||||    
T  11596297 ctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggacaatgacacgacacctacacttgtaattacactgaattatgtgattttttcaa 11596396  T
Q  206 attatt 211  Q
    ||||||    
T  11596397 attatt 11596402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 114 - 211
Target Start/End: Complemental strand, 4383480 - 4383377
Alignment:
Q  114 aagcacggacactcctcggattaggcgtgtc-------gtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaa 206  Q
    |||||||||||||||||||||||||||||||       ||||  || |||||||||||||||||| |||||||||||||| |||||||||| ||||||||    
T  4383480 aagcacggacactcctcggattaggcgtgtccggtgtcgtgtttgacaccgacacgacactgacatttgtaattacactgaattatgtgat-ttttcaaa 4383382  T
Q  207 ttatt 211  Q
    |||||    
T  4383381 ttatt 4383377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 3947760 - 3947816
Alignment:
Q  155 ccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  3947760 ccgacacgacactgacacttgtaattacactgaattatgcgattttttcaaattatt 3947816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 19482749 - 19482677
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||| |||||||||||||||  |||||||||||||||| | |||||||||| |||||||||||||    
T  19482749 cgtgtcgtgtccaataccgacacgacaccaacacttgtaattacaccgaattatgtgatattttcaaattatt 19482677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 51701339 - 51701267
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||| ||| |||||||||||||| |||||||||||||||||  ||||||| ||||||||||||||||    
T  51701339 cgtgtcgtgttcgacaccgacacgacactaacacttgtaattacactcaattatgtaattttttcaaattatt 51701267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 28964248 - 28964298
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  28964248 cgacacagacacttgtaattacactgaattatgtgattttttcaaattatt 28964298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 12895110 - 12895166
Alignment:
Q  155 ccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||| |||||||||||||||  || ||||||||||||||||||||||||    
T  12895110 ccgacacgacaccgacacttgtaattactttgaattatgtgattttttcaaattatt 12895166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 24613679 - 24613751
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||| || ||||||| ||||| |||||||||| ||||| || ||||||||||||| ||||||||||    
T  24613679 cgtgtcgtgtctgacaccgacatgacaccgacacttgtacttacattgaattatgtgattttctcaaattatt 24613751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 27706155 - 27706227
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||| |   |||||||||| |||||||||||||||||  ||||||||||||||| ||||||||    
T  27706155 cgtgtcgtgtccgacattaacacgacactcacacttgtaattacactaaattatgtgatttttttaaattatt 27706227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 29205501 - 29205453
Alignment:
Q  163 acactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  29205501 acaccgacacttgtaattacactgaattatgtgattttttcaaattatt 29205453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 30982856 - 30982924
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaat 207  Q
    ||||||||||| || ||||||||||||| ||||||| ||||||||||| | ||||||||||| ||||||    
T  30982856 cgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaatatgtgattttctcaaat 30982924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 21945562 - 21945512
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||| ||||||| ||||||||||||||||    
T  21945562 cgacaccgacacttgtaattacactgaattatgtcattttttcaaattatt 21945512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 23292986 - 23293036
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| |||||||||||||| |||| ||||||||||||||||||||||||    
T  23292986 cgacaccgacacttgtaattatactgaattatgtgattttttcaaattatt 23293036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 28084638 - 28084540
Alignment:
Q  114 aagcacggacactcctcggattaggcgtgtc---gtgtccgatac-------cgacacgacactgacacttgtaattacactgcattatgtgatttttt 202  Q
    |||||||||||||||||||||||||||||||   ||||| || ||       ||||||||||| |||||||||||||||| || |||||||||||||||    
T  28084638 aagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcaccgacacgacacagacacttgtaattacattgaattatgtgatttttt 28084540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 38847012 - 38847062
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||||||||||||||| || || ||||||||||||||||||    
T  38847012 cgacactgacacttgtaattacactgaataatatgattttttcaaattatt 38847062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 54580023 - 54580073
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||| ||||||||||| ||||||||||||||||||||||||    
T  54580023 cgacaccgacacttataattacactgaattatgtgattttttcaaattatt 54580073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 202
Target Start/End: Complemental strand, 12708261 - 12708165
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgt--cg-tgtccgataccgacacgacactgacacttgtaattacactgcattatgtgatttttt 202  Q
    |||| |||||||||| |||||||||||||||||||  || ||||||| |  |||||||||  ||||||||||||||||||| ||||| | |||||||    
T  12708261 ctatgaagcacggacgctcctcggattaggcgtgttccgatgtccgacatagacacgacatcgacacttgtaattacactgaattatttcatttttt 12708165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 6485613 - 6485661
Alignment:
Q  163 acactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  6485613 acaccgacacttgtaattacactaaattatgtgattttttcaaattatt 6485661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 30299048 - 30298955
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtga-ttttttcaaat 207  Q
    |||| |||||||||||||||||||||||| ||||||          ||| |||||||| ||||||||||||||||||| ||||||| | |||||||||||    
T  30299048 ctatgaagcacggacactcctcggattagacgtgtc----------ccggcacgacaccgacacttgtaattacactgaattatgtcatttttttcaaat 30298959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 30327916 - 30327823
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtga-ttttttcaaat 207  Q
    |||| |||||||||||||||||||||||| ||||||          ||| |||||||| ||||||||||||||||||| ||||||| | |||||||||||    
T  30327916 ctatgaagcacggacactcctcggattagacgtgtc----------ccggcacgacaccgacacttgtaattacactgaattatgtcatttttttcaaat 30327827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 46083969 - 46084029
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattt 199  Q
    ||||||||||||||||| |||||||||| ||||| | ||||||||||  ||||||||||||    
T  46083969 cgtgtcgtgtccgatactgacacgacaccgacacatataattacactagattatgtgattt 46084029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 202
Target Start/End: Original strand, 22234868 - 22234931
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgatttttt 202  Q
    ||||||||||| || ||||||||||||| ||||| |  |||||||||| |||||||||||||||    
T  22234868 cgtgtcgtgtcagacaccgacacgacaccgacacatagaattacactgaattatgtgatttttt 22234931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 202
Target Start/End: Complemental strand, 42640644 - 42640547
Alignment:
Q  108 tctataaagcacggacactcctcggattaggcgtgtc---gtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgatttttt 202  Q
    ||||| ||||||||| |||||||||||||||||||||   ||| | || ||     |||||| ||||||||||||||||||| |||||||||||||||    
T  42640644 tctatgaagcacggaaactcctcggattaggcgtgtcctggtgccggacacgtgtccgacaccgacacttgtaattacactgaattatgtgatttttt 42640547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 904001 - 903931
Alignment:
Q  141 tgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||| | ||||| |||| ||||| || | ||||||||||| ||||||||||||| ||||||||||    
T  904001 tgtcgtgtccaacaccgatacgatactgatacatataattacactgaattatgtgattttctcaaattatt 903931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 12797338 - 12797387
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||||||||||    
T  12797338 cgacaccgacacttgtaattacactgaattatgtga-tttttcaaattatt 12797387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 200
Target Start/End: Original strand, 5414150 - 5414211
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgatttt 200  Q
    |||||||||||||| || |||||||||| || || | ||||||||||||||| |||||||||    
T  5414150 cgtgtcgtgtccgacactgacacgacaccgatacatataattacactgcattttgtgatttt 5414211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 144
Target Start/End: Original strand, 715544 - 715580
Alignment:
Q  108 tctataaagcacggacactcctcggattaggcgtgtc 144  Q
    ||||| |||||||||||||||||||||||||||||||    
T  715544 tctatgaagcacggacactcctcggattaggcgtgtc 715580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 144
Target Start/End: Original strand, 752870 - 752906
Alignment:
Q  108 tctataaagcacggacactcctcggattaggcgtgtc 144  Q
    ||||| |||||||||||||||||||||||||||||||    
T  752870 tctatgaagcacggacactcctcggattaggcgtgtc 752906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 848028 - 847960
Alignment:
Q  143 tcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||| ||| ||| ||||| |||||||||||||| | || ||||||| ||||| ||||||||||    
T  848028 tcgtgtccgacaccaacaagacaccgacacttgtaattatagtgaattatgtaattttctcaaattatt 847960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 5775304 - 5775408
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtcgtgtccg-atac-cgacacgacactgacacttgtaattacactgcattatgtgattttttcaaa 206  Q
    |||| |||||||||||||||||||||||||||||||  | | |   || ||||| ||||| ||||| | ||||||||||  ||||||||||||| |||||    
T  5775304 ctatgaagcacggacactcctcggattaggcgtgtcccggcggtggacacgacatgacaccgacacatataattacacttaattatgtgattttctcaaa 5775403  T
Q  207 ttatt 211  Q
    |||||    
T  5775404 ttatt 5775408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 14126093 - 14126161
Alignment:
Q  144 cgtgtccgataccgacacgacac-tgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||| || ||||||| || |||||||| ||||||||||| ||||||||| ||| ||||||||||    
T  14126093 cgtgtccgacacggacacgagacatgacacttataattacactgaattatgtgactttatcaaattatt 14126161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 53490744 - 53490784
Alignment:
Q  141 tgtcgtgtccgataccgacacgacactgacacttgtaatta 181  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  53490744 tgtcgtgtccgacaccgacacgatactgacacttgtaatta 53490784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 144
Target Start/End: Original strand, 3064868 - 3064903
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtc 144  Q
    |||| |||||||||||||||||||||||||||||||    
T  3064868 ctatgaagcacggacactcctcggattaggcgtgtc 3064903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 19312416 - 19312353
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgatttttt 202  Q
    |||||||| ||||| | ||||||||||| || |||| ||||||||||| || ||||||||||||    
T  19312416 cgtgtcgtatccgacaacgacacgacaccgatacttataattacactgaatcatgtgatttttt 19312353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 167
Target Start/End: Complemental strand, 20633590 - 20633529
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtc---gtgtccgataccgacacgacact 167  Q
    |||| ||||||| |||||||| ||||||||||||||   |||||||| ||||||||||||||    
T  20633590 ctatgaagcacgaacactccttggattaggcgtgtcttggtgtccgacaccgacacgacact 20633529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 144
Target Start/End: Original strand, 23292926 - 23292961
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtc 144  Q
    |||| |||||||||||||||||||||||||||||||    
T  23292926 ctatgaagcacggacactcctcggattaggcgtgtc 23292961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 37203372 - 37203273
Alignment:
Q  108 tctataaagcacggacactcctcggattaggcgtgtcgtgtccgataccg-acacgacactgacacttgtaattacactgcattatgtgattttttcaaa 206  Q
    ||||| ||||||||||||| |||||||||| ||||||    ||| |  || || ||||||| |||||||||||||||||  ||||||| |||||||||||    
T  37203372 tctatgaagcacggacacttctcggattagacgtgtc----ccggtgtcggacccgacact-acacttgtaattacactaaattatgtcattttttcaaa 37203278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 49431085 - 49431034
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgatt-ttttcaaattatt 211  Q
    |||||| ||||||| ||||||||||| ||||||||||| |||||||||||||    
T  49431085 cgacaccgacacttttaattacactgaattatgtgatttttttcaaattatt 49431034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 2361975 - 2362025
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||| ||||||||||  ||||||| ||||||||||||||||    
T  2361975 cgacaccgacacttttaattacactaaattatgtaattttttcaaattatt 2362025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 8423718 - 8423768
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| |||| || ||||||||||| ||||||||||||| ||||||||||    
T  8423718 cgacaccgacatttataattacactgaattatgtgattttctcaaattatt 8423768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 12895274 - 12895324
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||| |||||||||   ||||||||||||||||||||||||    
T  12895274 cgacaccgacacttataattacacaaaattatgtgattttttcaaattatt 12895324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 16073453 - 16073404
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||| |||||| || ||||||||||||||    
T  16073453 cgacaccgacacttgtaattacactgaattatgcga-tttttcaaattatt 16073404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 144
Target Start/End: Original strand, 22440562 - 22440592
Alignment:
Q  114 aagcacggacactcctcggattaggcgtgtc 144  Q
    |||||||||||||||||||||||||||||||    
T  22440562 aagcacggacactcctcggattaggcgtgtc 22440592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 144
Target Start/End: Complemental strand, 28470487 - 28470449
Alignment:
Q  106 attctataaagcacggacactcctcggattaggcgtgtc 144  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  28470487 attctatgaagcacggacactcctcggattaggcatgtc 28470449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 34306804 - 34306853
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| |||||||||||||||||| |||||| ||| ||||||||||||||    
T  34306804 cgacaccgacacttgtaattacactacattatctga-tttttcaaattatt 34306853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 40481687 - 40481646
Alignment:
Q  169 acacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||||||| |||||||||| |||||||||||||    
T  40481687 acacttgtaattacactgaattatgtgat-ttttcaaattatt 40481646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 169 - 202
Target Start/End: Original strand, 715615 - 715648
Alignment:
Q  169 acacttgtaattacactgcattatgtgatttttt 202  Q
    |||||||||||||||||| |||||||||||||||    
T  715615 acacttgtaattacactgaattatgtgatttttt 715648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 169 - 202
Target Start/End: Original strand, 752941 - 752974
Alignment:
Q  169 acacttgtaattacactgcattatgtgatttttt 202  Q
    |||||||||||||||||| |||||||||||||||    
T  752941 acacttgtaattacactgaattatgtgatttttt 752974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 6879465 - 6879510
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaa 206  Q
    |||||| ||||||||||||||||||  |||||||||||||| ||||    
T  6879465 cgacaccgacacttgtaattacacttaattatgtgatttttccaaa 6879510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 14465088 - 14465125
Alignment:
Q  174 tgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||| || ||||||||||||||||||||||||    
T  14465088 tgtaattacattgaattatgtgattttttcaaattatt 14465125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 16303263 - 16303316
Alignment:
Q  158 acacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||| ||||||||||||||||||  ||||| | ||||||||||| ||||    
T  16303263 acacgacaccgacacttgtaattacactaaattatatcattttttcaaaatatt 16303316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 35157986 - 35158035
Alignment:
Q  162 gacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||| ||||||| ||||||||||  |||||||||||||| |||||||||    
T  35157986 gacaccgacacttataattacactaaattatgtgatttttccaaattatt 35158035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 144
Target Start/End: Complemental strand, 29205588 - 29205552
Alignment:
Q  108 tctataaagcacggacactcctcggattaggcgtgtc 144  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  29205588 tctatgaagcacgaacactcctcggattaggcgtgtc 29205552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 144
Target Start/End: Complemental strand, 36635450 - 36635414
Alignment:
Q  108 tctataaagcacggacactcctcggattaggcgtgtc 144  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  36635450 tctatgaagcacggacactcttcggattaggcgtgtc 36635414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 38148703 - 38148775
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||| | ||| ||||||||  |||| ||  |||||||||| ||||||||||||| ||||| ||||    
T  38148703 cgtgtcgtgtccaacaccaacacgacatcgacatttaaaattacactgaattatgtgattttctcaaactatt 38148775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 144
Target Start/End: Complemental strand, 49431146 - 49431110
Alignment:
Q  108 tctataaagcacggacactcctcggattaggcgtgtc 144  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  49431146 tctataaagcatggacactcctcggataaggcgtgtc 49431110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 263350 - 263422
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||| || ||||||||||||||||||||| ||||||||||| |||||||| |||| ||||||||||    
T  263350 cgtgtcgtgtctgacaccgacacgacactgacacttataattacactgaattatgtggttttctcaaattatt 263422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 3009 - 2946
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgatttttt 202  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  3009 cgtgtcgtgtctgataccgacacgacactgatacttgtaattacactaaattatgtgatttttt 2946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 143
Target Start/End: Complemental strand, 3052 - 3024
Alignment:
Q  115 agcacggacactcctcggattaggcgtgt 143  Q
    |||||||||||||||||||||||||||||    
T  3052 agcacggacactcctcggattaggcgtgt 3024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 8617 - 8685
Alignment:
Q  143 tcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||||||||||||| |||| ||||||||| || | |||||||||| |||||||||||||    
T  8617 tcgtgtccgataccgacacgacaccgacatttgtaattataccgaattatgtgatattttcaaattatt 8685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 53261 - 53189
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||| ||||||||| ||| ||||||| ||||||||||| ||||||||||||| ||||||||||    
T  53261 cgtgtcatgtccgacaccgacacggcaccgacacttataattacactgaattatgtgattttctcaaattatt 53189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 23588 - 23529
Alignment:
Q  143 tcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgatttttt 202  Q
    |||||||||| ||||| ||||||||||||||| ||||||||||| |||||||||||||||    
T  23588 tcgtgtccgacaccgaaacgacactgacacttataattacactgaattatgtgatttttt 23529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 23485 - 23438
Alignment:
Q  155 ccgacacgacactgacacttgtaattacactgcattatgtgatttttt 202  Q
    |||||||||||| ||||||| ||||||||||| |||||||||||||||    
T  23485 ccgacacgacaccgacacttataattacactgaattatgtgatttttt 23438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 71806 - 71743
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgatttttt 202  Q
    ||||| |||||||| |||||||||||||||||||| |||||||||||| ||| |||||||||||    
T  71806 cgtgttgtgtccgacaccgacacgacactgacactagtaattacactgaattgtgtgatttttt 71743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 178813 - 178869
Alignment:
Q  156 cgacacgacactgacacttgtaattacactgcattatg-tgattttttcaaattatt 211  Q
    ||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  178813 cgacatgacactgacacttgtaattacactgaattatgatgattttttcaaattatt 178869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 241675 - 241603
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||| ||| ||||||||| ||||||  ||||||||||  |||||||||||||| |||||||||    
T  241675 cgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaattatgtgatttttccaaattatt 241603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 144
Target Start/End: Complemental strand, 241725 - 241689
Alignment:
Q  108 tctataaagcacggacactcctcggattaggcgtgtc 144  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  241725 tctatgaagcacggacacttctcggattaggcgtgtc 241689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 462 - 512
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||||||||||    
T  462 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattatt 512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 51862 - 51820
Alignment:
Q  169 acacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  51862 acacttgtaattacactgaattatgtgattttttcaaattatt 51820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 46741 - 46691
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| |||| |||||||||||||| ||||||||||||||||||||||||    
T  46741 cgacaccgacatttgtaattacactgaattatgtgattttttcaaattatt 46691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 145
Target Start/End: Complemental strand, 46776 - 46740
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtcg 145  Q
    |||| ||||||||||||||||||||||||||||||||    
T  46776 ctatgaagcacggacactcctcggattaggcgtgtcg 46740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 23832 - 23778
Alignment:
Q  158 acacgacactgacacttgtaattacactgcattatgtgatt-ttttcaaattatt 211  Q
    ||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||    
T  23832 acacgacaccgacacttgtaattacactgaattatgtgatttttttcaaattatt 23778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 14580 - 14539
Alignment:
Q  170 cacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  14580 cacttgtaattacactgaattatgtgattttttcaaattatt 14539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 17750 - 17799
Alignment:
Q  162 gacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattatt 17799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 9726 - 9797
Alignment:
Q  140 gtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||| || ||| ||||||||| ||||| | ||||||||||| |||| |||||||| ||||||||||    
T  9726 gtgtcgtgtctgacaccaacacgacaccgacacatataattacactgaattaagtgattttctcaaattatt 9797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 211
Target Start/End: Complemental strand, 130534 - 130491
Alignment:
Q  168 gacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||    
T  130534 gacacttgtaattacactgaattatgtgattttttcaaactatt 130491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 145 - 211
Target Start/End: Complemental strand, 1110 - 1044
Alignment:
Q  145 gtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| | |||||||| |||||||||| | || |||||||| ||||||| ||||||||||||||||    
T  1110 gtgtccaacaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattatt 1044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 70337 - 70287
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||| ||||||||||| ||||||| ||||||||||||||||    
T  70337 cgacaccgacacttataattacactgaattatgttattttttcaaattatt 70287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 35; Significance: 0.00000000007; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 165 - 211
Target Start/End: Complemental strand, 92862 - 92816
Alignment:
Q  165 actgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||||||||||| ||||||| ||||| ||||||||||    
T  92862 actgacacttgtaattacactgaattatgtaattttctcaaattatt 92816  T

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Target: scaffold0004; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 83236 - 83172
Alignment:
Q  144 cgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaatt 208  Q
    ||||||||||| | | ||||||| |||| |||||||||||||| ||||||| ||||||| |||||    
T  83236 cgtgtccgatatcaatacgacaccgacatttgtaattacactgaattatgtcatttttttaaatt 83172  T

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Target: scaffold0004; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 144
Target Start/End: Complemental strand, 92936 - 92906
Alignment:
Q  114 aagcacggacactcctcggattaggcgtgtc 144  Q
    |||||||||||||||||||||||||||||||    
T  92936 aagcacggacactcctcggattaggcgtgtc 92906  T

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Target: scaffold0004; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 123686 - 123650
Alignment:
Q  162 gacactgacacttgtaattacactgcattatgtgatt 198  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  123686 gacaccgacacttgtaattacactgaattatgtgatt 123650  T

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Target: scaffold0623 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 200
Target Start/End: Original strand, 5974 - 6035
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgatttt 200  Q
    |||||||||| ||| ||||| ||||||| ||||| | ||||||||||||||| |||||||||    
T  5974 cgtgtcgtgttcgacaccgatacgacaccgacacatataattacactgcattttgtgatttt 6035  T

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Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 208
Target Start/End: Original strand, 44503 - 44572
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaatt 208  Q
    ||||| |||||| | |||||||||| || ||||| | ||||||||||| ||||||||||||| |||||||    
T  44503 cgtgttgtgtccaacaccgacacgataccgacacatataattacactgaattatgtgattttctcaaatt 44572  T

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Target: scaffold0793 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 144
Target Start/End: Original strand, 4820 - 4856
Alignment:
Q  108 tctataaagcacggacactcctcggattaggcgtgtc 144  Q
    ||||| |||||||||||||||||||||||||||||||    
T  4820 tctatgaagcacggacactcctcggattaggcgtgtc 4856  T

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Target: scaffold0793; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 169 - 202
Target Start/End: Original strand, 4891 - 4924
Alignment:
Q  169 acacttgtaattacactgcattatgtgatttttt 202  Q
    |||||||||||||||||| |||||||||||||||    
T  4891 acacttgtaattacactgaattatgtgatttttt 4924  T

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Target: scaffold0057 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 24105 - 24034
Alignment:
Q  139 cgtgtcgtgtccgataccgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||| |||||||| |||||||||||||||| || ||||||||||||  |||||| |||||||  ||||||||    
T  24105 cgtgttgtgtccgacaccgacacgacactgaaac-tgtaattacactaaattatgagatttttgaaaattatt 24034  T

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Target: scaffold0049 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 56988 - 56932
Alignment:
Q  154 accgacacgacactgacacttgtaattacactgcattatgtgattttttcaaattat 210  Q
    ||||||||||||||||||||| | ||||||||| ||||| | ||||| |||||||||    
T  56988 accgacacgacactgacacttatgattacactgaattatatcattttctcaaattat 56932  T

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Target: scaffold0049; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 63831 - 63782
Alignment:
Q  162 gacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||| ||||||||||||| ||||| ||||||| ||||| ||||||||||    
T  63831 gacaccgacacttgtaattgcactgaattatgtaattttctcaaattatt 63782  T

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Target: scaffold0475 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 144
Target Start/End: Complemental strand, 3427 - 3392
Alignment:
Q  109 ctataaagcacggacactcctcggattaggcgtgtc 144  Q
    |||| |||||||||||||||||||||||||||||||    
T  3427 ctatgaagcacggacactcctcggattaggcgtgtc 3392  T

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Target: scaffold0306 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 13459 - 13409
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||| ||||||||| ||||| ||||||||||||| ||||||||||    
T  13459 cgacaccgacccttgtaattgcactgaattatgtgattttctcaaattatt 13409  T

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Target: scaffold0246 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 19626 - 19585
Alignment:
Q  169 acacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||||||| |||||||||| |||||||||||||    
T  19626 acacttgtaattacactgaattatgtgat-ttttcaaattatt 19585  T

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Target: scaffold0152 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 21868 - 21918
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||| ||||||||| ||||| ||||||||||||| ||||||||||    
T  21868 cgacaccgacccttgtaattgcactgaattatgtgattttctcaaattatt 21918  T

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Target: scaffold0122 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 8068 - 8019
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||| ||||||||||| ||||| ||||||||||||||||||    
T  8068 cgacaccgacactt-taattacactgtattatatgattttttcaaattatt 8019  T

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Target: scaffold0066 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 33375 - 33413
Alignment:
Q  173 ttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  33375 ttgtaattacactgaattatgttattttttcaaattatt 33413  T

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Target: scaffold0053 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 8857 - 8807
Alignment:
Q  161 cgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||| ||||||||||||||||||  || || ||||||||||||||||||    
T  8857 cgacaccgacacttgtaattacactaaataatatgattttttcaaattatt 8807  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 135308 - 135362
Alignment:
Q  157 gacacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    |||||||||| ||||| | ||||||||| | ||||||||||||| ||||||||||    
T  135308 gacacgacaccgacacatataattacacagaattatgtgattttctcaaattatt 135362  T

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Target: scaffold0236 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 25765 - 25818
Alignment:
Q  158 acacgacactgacacttgtaattacactgcattatgtgattttttcaaattatt 211  Q
    ||||||||| ||||||| ||||||||||  ||||||||||||| || |||||||    
T  25765 acacgacaccgacacttataattacactaaattatgtgattttctctaattatt 25818  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 144
Target Start/End: Complemental strand, 188512 - 188484
Alignment:
Q  116 gcacggacactcctcggattaggcgtgtc 144  Q
    |||||||||||||||||||||||||||||    
T  188512 gcacggacactcctcggattaggcgtgtc 188484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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