View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20897_low_4 (Length: 557)

Name: NF20897_low_4
Description: NF20897
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20897_low_4
NF20897_low_4
[»] chr7 (27 HSPs)
chr7 (168-313)||(25714548-25714693)
chr7 (53-167)||(25714410-25714524)
chr7 (402-461)||(17041030-17041089)
chr7 (402-461)||(43215183-43215242)
chr7 (402-460)||(25021353-25021411)
chr7 (402-460)||(26459428-26459486)
chr7 (409-461)||(31706424-31706476)
chr7 (402-460)||(2962460-2962517)
chr7 (402-460)||(22760863-22760921)
chr7 (402-460)||(42836019-42836077)
chr7 (403-460)||(20335850-20335907)
chr7 (402-439)||(20952167-20952204)
chr7 (402-462)||(23552116-23552176)
chr7 (403-463)||(45709727-45709787)
chr7 (404-440)||(48771958-48771994)
chr7 (403-462)||(2446306-2446365)
chr7 (402-441)||(7721388-7721427)
chr7 (402-444)||(9608647-9608689)
chr7 (402-444)||(9836219-9836261)
chr7 (402-460)||(18363696-18363754)
chr7 (402-460)||(30442488-30442546)
chr7 (402-460)||(39631844-39631902)
chr7 (402-439)||(21854569-21854606)
chr7 (404-457)||(45976943-45976996)
chr7 (402-458)||(7744130-7744186)
chr7 (403-439)||(25590632-25590668)
chr7 (402-450)||(36803645-36803693)
[»] chr4 (27 HSPs)
chr4 (460-550)||(35085211-35085301)
chr4 (403-445)||(30938238-30938280)
chr4 (402-460)||(37109369-37109427)
chr4 (402-443)||(38869785-38869826)
chr4 (402-463)||(51250540-51250601)
chr4 (402-457)||(7292816-7292871)
chr4 (406-460)||(15180741-15180795)
chr4 (411-461)||(27965537-27965587)
chr4 (402-460)||(31759676-31759734)
chr4 (403-460)||(2606436-2606493)
chr4 (403-460)||(39509070-39509127)
chr4 (410-450)||(17816519-17816559)
chr4 (402-438)||(53496899-53496935)
chr4 (402-465)||(7949472-7949535)
chr4 (402-460)||(7539590-7539648)
chr4 (403-441)||(12798703-12798741)
chr4 (406-460)||(37443702-37443756)
chr4 (402-460)||(46545711-46545769)
chr4 (406-460)||(56236937-56236991)
chr4 (402-443)||(8714696-8714737)
chr4 (407-460)||(9241048-9241101)
chr4 (403-460)||(19238596-19238653)
chr4 (403-443)||(13015444-13015484)
chr4 (404-456)||(13901746-13901798)
chr4 (402-442)||(23377974-23378014)
chr4 (407-443)||(40813341-40813377)
chr4 (403-439)||(41346982-41347018)
[»] chr5 (20 HSPs)
chr5 (403-460)||(29075781-29075838)
chr5 (402-461)||(30883216-30883275)
chr5 (402-461)||(29692404-29692463)
chr5 (402-461)||(34984805-34984864)
chr5 (404-460)||(21549157-21549213)
chr5 (402-442)||(43442214-43442254)
chr5 (402-461)||(87441-87500)
chr5 (402-460)||(16457810-16457868)
chr5 (403-460)||(14495824-14495881)
chr5 (405-461)||(22737081-22737137)
chr5 (406-462)||(26598522-26598578)
chr5 (403-437)||(4793107-4793141)
chr5 (404-442)||(22020882-22020920)
chr5 (402-460)||(25627057-25627115)
chr5 (403-460)||(8278294-8278351)
chr5 (407-460)||(8642200-8642253)
chr5 (403-460)||(16773807-16773864)
chr5 (402-462)||(14285159-14285219)
chr5 (410-462)||(26078077-26078129)
chr5 (402-442)||(37258384-37258424)
[»] chr2 (24 HSPs)
chr2 (402-459)||(16918596-16918653)
chr2 (402-461)||(29503270-29503329)
chr2 (406-461)||(19322767-19322822)
chr2 (402-460)||(42327413-42327471)
chr2 (403-460)||(28846691-28846748)
chr2 (402-461)||(42602553-42602612)
chr2 (403-461)||(1729815-1729873)
chr2 (402-460)||(42922414-42922472)
chr2 (406-463)||(43964010-43964067)
chr2 (406-458)||(6760889-6760941)
chr2 (402-462)||(11251085-11251145)
chr2 (402-466)||(23052541-23052605)
chr2 (402-462)||(23230623-23230682)
chr2 (402-461)||(34041606-34041665)
chr2 (402-461)||(37480074-37480133)
chr2 (402-460)||(5147697-5147755)
chr2 (402-456)||(30838069-30838123)
chr2 (403-457)||(33962803-33962857)
chr2 (402-443)||(12801306-12801347)
chr2 (404-445)||(12994396-12994437)
chr2 (402-459)||(23465939-23465996)
chr2 (402-458)||(12086147-12086203)
chr2 (402-442)||(17737642-17737682)
chr2 (402-442)||(30410567-30410607)
[»] chr8 (25 HSPs)
chr8 (404-460)||(6569791-6569847)
chr8 (406-458)||(7286209-7286261)
chr8 (403-461)||(16852339-16852397)
chr8 (402-458)||(2203494-2203550)
chr8 (402-461)||(19703505-19703564)
chr8 (401-460)||(30483901-30483960)
chr8 (402-463)||(44780132-44780193)
chr8 (406-458)||(3624582-3624634)
chr8 (403-463)||(4830484-4830544)
chr8 (402-437)||(3305206-3305241)
chr8 (402-461)||(18897165-18897224)
chr8 (405-460)||(20994479-20994534)
chr8 (402-457)||(36205198-36205253)
chr8 (403-461)||(5264543-5264601)
chr8 (402-460)||(18540298-18540356)
chr8 (403-457)||(18546381-18546435)
chr8 (403-461)||(35641920-35641978)
chr8 (403-440)||(968382-968419)
chr8 (403-440)||(7140729-7140766)
chr8 (403-440)||(9555476-9555513)
chr8 (407-460)||(14254727-14254780)
chr8 (403-440)||(30774755-30774792)
chr8 (402-443)||(35690082-35690123)
chr8 (402-442)||(6536538-6536578)
chr8 (402-462)||(28783058-28783118)
[»] chr3 (26 HSPs)
chr3 (402-462)||(46518626-46518686)
chr3 (402-461)||(7975417-7975476)
chr3 (402-460)||(4222141-4222199)
chr3 (403-461)||(36720380-36720438)
chr3 (403-460)||(31788989-31789046)
chr3 (402-461)||(30311305-30311364)
chr3 (402-461)||(32651456-32651514)
chr3 (403-461)||(31520624-31520682)
chr3 (402-443)||(28928897-28928938)
chr3 (400-460)||(16354908-16354968)
chr3 (403-459)||(47454636-47454692)
chr3 (403-439)||(51903897-51903933)
chr3 (402-462)||(53412943-53413003)
chr3 (403-450)||(4844530-4844577)
chr3 (403-450)||(4870226-4870273)
chr3 (406-461)||(18319190-18319245)
chr3 (402-461)||(27093379-27093438)
chr3 (402-440)||(14339630-14339668)
chr3 (402-460)||(27923061-27923119)
chr3 (406-460)||(28703426-28703480)
chr3 (403-440)||(2667882-2667919)
chr3 (404-461)||(10499129-10499186)
chr3 (402-443)||(35415285-35415326)
chr3 (404-460)||(2597240-2597296)
chr3 (402-462)||(15048079-15048139)
chr3 (404-460)||(37051314-37051370)
[»] chr6 (15 HSPs)
chr6 (402-461)||(12188321-12188380)
chr6 (403-461)||(33549103-33549161)
chr6 (402-442)||(28363955-28363995)
chr6 (404-459)||(14446196-14446251)
chr6 (406-460)||(30127400-30127454)
chr6 (403-461)||(31623010-31623068)
chr6 (402-443)||(34293834-34293875)
chr6 (402-444)||(24555735-24555777)
chr6 (403-440)||(6776626-6776663)
chr6 (408-461)||(12234531-12234584)
chr6 (403-440)||(13227177-13227214)
chr6 (403-460)||(14557962-14558019)
chr6 (403-440)||(24641209-24641246)
chr6 (412-460)||(1992275-1992322)
chr6 (400-464)||(24617075-24617139)
[»] chr1 (25 HSPs)
chr1 (402-457)||(15786338-15786393)
chr1 (402-461)||(41508830-41508889)
chr1 (402-460)||(9165213-9165271)
chr1 (402-460)||(51703779-51703837)
chr1 (402-443)||(8177200-8177241)
chr1 (402-462)||(6650593-6650653)
chr1 (403-443)||(17410248-17410288)
chr1 (402-458)||(33700791-33700847)
chr1 (402-462)||(36371468-36371528)
chr1 (402-442)||(44046166-44046206)
chr1 (403-462)||(45235398-45235457)
chr1 (404-443)||(52336794-52336833)
chr1 (403-461)||(25297771-25297829)
chr1 (407-457)||(26232409-26232459)
chr1 (402-460)||(31794282-31794340)
chr1 (400-461)||(4566547-4566608)
chr1 (402-460)||(2799862-2799920)
chr1 (402-460)||(10526823-10526881)
chr1 (402-460)||(19528345-19528403)
chr1 (404-461)||(29056376-29056434)
chr1 (402-460)||(30420310-30420368)
chr1 (403-461)||(40257398-40257456)
chr1 (404-466)||(31049603-31049669)
chr1 (404-459)||(18459251-18459307)
chr1 (404-440)||(31383818-31383854)
[»] scaffold0258 (1 HSPs)
scaffold0258 (403-460)||(15342-15399)
[»] scaffold0291 (1 HSPs)
scaffold0291 (402-440)||(2488-2526)
[»] scaffold0178 (1 HSPs)
scaffold0178 (402-460)||(6652-6710)
[»] scaffold0004 (1 HSPs)
scaffold0004 (402-456)||(81582-81636)
[»] scaffold0299 (1 HSPs)
scaffold0299 (403-440)||(11548-11585)
[»] scaffold0002 (1 HSPs)
scaffold0002 (402-457)||(94989-95044)
[»] scaffold0194 (1 HSPs)
scaffold0194 (402-440)||(13064-13102)
[»] scaffold0118 (2 HSPs)
scaffold0118 (406-460)||(44126-44180)
scaffold0118 (403-460)||(41652-41709)
[»] scaffold0086 (1 HSPs)
scaffold0086 (402-460)||(47382-47440)
[»] scaffold0063 (1 HSPs)
scaffold0063 (402-460)||(35407-35465)
[»] scaffold1367 (1 HSPs)
scaffold1367 (403-440)||(859-896)
[»] scaffold0021 (1 HSPs)
scaffold0021 (403-439)||(157006-157042)


Alignment Details
Target: chr7 (Bit Score: 110; Significance: 4e-55; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 168 - 313
Target Start/End: Original strand, 25714548 - 25714693
Alignment:
Q  168 agcactagcagaagtaaatttgaagtgtataagccaaaaagtcaccactccaattggtgactctctcgagatacttgcttattatttggctcaagaagtg 267  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||| | |||||||||||||||||||    
T  25714548 agcactagcagaagttaatttgaagtgtataagccaaaaagtcaccactcctattggtgactctcttgagacacttgcattttatttggctcaagaagtg 25714647  T
Q  268 acaaatcatggagattaactcaaaggtgaggcatacaagaattttc 313  Q
    |||||||||||||| || |||||||| |||||||||||||||||||    
T  25714648 acaaatcatggagaatacctcaaaggcgaggcatacaagaattttc 25714693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 25714410 - 25714524
Alignment:
Q  53 aacaatttcaatgaaatcagatctttcatcaattcaacaatcacttactatgccacaagaaaatatggaaattgaaaaccacgtgagtcttccacacttg 152  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  25714410 aacactttcaatgaaatcagatttttcatcaattcaacaatcacttactttgccacaagaaaatatggaaattgaaaaccaagtgagtcttccacatttg 25714509  T
Q  153 atggaaacacatgga 167  Q
    |||||| ||||||||    
T  25714510 atggaagcacatgga 25714524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 17041030 - 17041089
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    |||||||||||||||| ||||||||||| ||||| ||||||||| |||| ||||||||||    
T  17041030 tgaggaggagcacacttccagatcccaagccaatgccactagaccaacccaagtgggttt 17041089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 43215242 - 43215183
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    |||||||||||||||||| || |||||| ||||||||||||||| |||| ||||||||||    
T  43215242 tgaggaggagcacactccgaggtcccaagccaataccactagaccaacccaagtgggttt 43215183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 402 - 460
Target Start/End: Original strand, 25021353 - 25021411
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    ||||||||||||||||||||| |||||| ||||||||||||| | |||| |||||||||    
T  25021353 tgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 25021411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 402 - 460
Target Start/End: Original strand, 26459428 - 26459486
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    ||||||||||||||||||||| |||||| ||||||||||||| | |||| |||||||||    
T  26459428 tgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 26459486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 461
Target Start/End: Complemental strand, 31706476 - 31706424
Alignment:
Q  409 gagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    |||||||||||||| |||||||||||||||||| ||| ||||||||| |||||    
T  31706476 gagcacactcccaggtcccaaaccaataccactggactaacctaagttggttt 31706424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 460
Target Start/End: Complemental strand, 2962517 - 2962460
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    ||||||||||||||||| ||| | |||||||||||||||||||| |||| |||||||||    
T  2962517 tgaggaggagcacactcacaggttccaaaccaataccactagaccaacc-aagtgggtt 2962460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 460
Target Start/End: Complemental strand, 22760921 - 22760863
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    ||||||||||||||||||||| ||||||  ||||||||| |||| |||| |||||||||    
T  22760921 tgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaagtgggtt 22760863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 460
Target Start/End: Original strand, 42836019 - 42836077
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    |||||| |||||||||||||| |||||| ||||||||||||| | |||| |||||||||    
T  42836019 tgaggaagagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42836077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 403 - 460
Target Start/End: Original strand, 20335850 - 20335907
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    |||||||||||||||||||  |||||| |||||||| |||||| |||| |||||||||    
T  20335850 gaggaggagcacactcccaagtcccaagccaatacctctagaccaacccaagtgggtt 20335907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 402 - 439
Target Start/End: Original strand, 20952167 - 20952204
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaatacca 439  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  20952167 tgaggaggagcacactcccaggtcccaaaccaatacca 20952204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 462
Target Start/End: Complemental strand, 23552176 - 23552116
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtttc 462  Q
    ||||||||||||||||||||| ||||||  ||||| |||||| | |||| |||||||||||    
T  23552176 tgaggaggagcacactcccaggtcccaagtcaatagcactaggccaacccaagtgggtttc 23552116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 463
Target Start/End: Original strand, 45709727 - 45709787
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtttca 463  Q
    |||||||||||||||| |||||||||| | ||||||||||| | |||| || |||||||||    
T  45709727 gaggaggagcacactctcagatcccaagctaataccactaggccaacccaaatgggtttca 45709787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 440
Target Start/End: Complemental strand, 48771994 - 48771958
Alignment:
Q  404 aggaggagcacactcccagatcccaaaccaataccac 440  Q
    |||||||||||||||||||||||||| ||||||||||    
T  48771994 aggaggagcacactcccagatcccaagccaataccac 48771958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 462
Target Start/End: Complemental strand, 2446365 - 2446306
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtttc 462  Q
    |||||||||||||||||||  |||||| |||||||||  |||| |||| |||||||||||    
T  2446365 gaggaggagcacactcccaagtcccaagccaataccatcagaccaacccaagtgggtttc 2446306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 441
Target Start/End: Complemental strand, 7721427 - 7721388
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccact 441  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  7721427 tgaggaggagtacactcccaggtcccaaaccaataccact 7721388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 444
Target Start/End: Original strand, 9608647 - 9608689
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactaga 444  Q
    |||||||||| ||||||||||||||||| || |||||||||||    
T  9608647 tgaggaggaggacactcccagatcccaagcctataccactaga 9608689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 444
Target Start/End: Original strand, 9836219 - 9836261
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactaga 444  Q
    |||||||||| ||||||||||||||||| || |||||||||||    
T  9836219 tgaggaggaggacactcccagatcccaagcctataccactaga 9836261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 460
Target Start/End: Complemental strand, 18363754 - 18363696
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    |||||||||||||||||||| ||| ||| || |||||||||| | |||| |||||||||    
T  18363754 tgaggaggagcacactcccaaatctcaagcctataccactaggccaacccaagtgggtt 18363696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 460
Target Start/End: Complemental strand, 30442546 - 30442488
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    |||||||||||| |||||||| |||||| ||||||||||| | | |||| |||||||||    
T  30442546 tgaggaggagcaaactcccaggtcccaagccaataccactgggccaacccaagtgggtt 30442488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 460
Target Start/End: Complemental strand, 39631902 - 39631844
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    |||||||||||  |||||||| |||||| ||||||||||||| | |||| |||||||||    
T  39631902 tgaggaggagcttactcccaggtcccaagccaataccactaggccaacccaagtgggtt 39631844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 439
Target Start/End: Complemental strand, 21854606 - 21854569
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaatacca 439  Q
    |||||||||||||||||||||||||| | |||||||||    
T  21854606 tgaggaggagcacactcccagatccctagccaatacca 21854569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 457
Target Start/End: Original strand, 45976943 - 45976996
Alignment:
Q  404 aggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgg 457  Q
    ||||||||||||||||||| || ||| ||||||||||||| | |||| ||||||    
T  45976943 aggaggagcacactcccaggtcacaagccaataccactaggccaacccaagtgg 45976996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 458
Target Start/End: Original strand, 7744130 - 7744186
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtggg 458  Q
    |||||||||||| | |||||||||| || || |||||||||| | ||||||||||||    
T  7744130 tgaggaggagcatagtcccagatcctaagcctataccactaggccaacctaagtggg 7744186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 403 - 439
Target Start/End: Complemental strand, 25590668 - 25590632
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaatacca 439  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  25590668 gaggaggagcacactcccagatctcaagccaatacca 25590632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 450
Target Start/End: Original strand, 36803645 - 36803693
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacc 450  Q
    |||||||||||| |||||||| ||||||  |||||||||||||| ||||    
T  36803645 tgaggaggagcatactcccaggtcccaagtcaataccactagaccaacc 36803693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 2e-41; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 460 - 550
Target Start/End: Original strand, 35085211 - 35085301
Alignment:
Q  460 ttcatttctgatctatttctctgtttttcttctccattgatttgcaaattctgcattcaattgttgagaatttcttgtttctattcatctc 550  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  35085211 ttcatttctgatctatttctctgtttttcttctccattgatttgcaaattctgcattcaattgttgagaatttcttgtttctattcttctc 35085301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 403 - 445
Target Start/End: Original strand, 30938238 - 30938280
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagac 445  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  30938238 gaggaggagcacactccaagatcccaaaccaataccactagac 30938280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 402 - 460
Target Start/End: Original strand, 37109369 - 37109427
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    ||||||||||||||||||||| |||||| ||||||||||||| | |||| |||||||||    
T  37109369 tgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 37109427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 443
Target Start/End: Complemental strand, 38869826 - 38869785
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactag 443  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  38869826 tgaggaggagcacactcccagatcccaagccaataccactag 38869785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 463
Target Start/End: Original strand, 51250540 - 51250601
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtttca 463  Q
    ||||| |||||||||||||||||||||| |||||||||| || | |||| ||||||||||||    
T  51250540 tgaggcggagcacactcccagatcccaagccaataccaccaggccaacccaagtgggtttca 51250601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 402 - 457
Target Start/End: Original strand, 7292816 - 7292871
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgg 457  Q
    ||||||||||||||||||||| | |||| ||||||||||||||| |||| ||||||    
T  7292816 tgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgg 7292871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 460
Target Start/End: Complemental strand, 15180795 - 15180741
Alignment:
Q  406 gaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    |||||| |||||||||| |||||| ||||||||||||||| || |||||||||||    
T  15180795 gaggagtacactcccaggtcccaagccaataccactagaccaatctaagtgggtt 15180741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 461
Target Start/End: Original strand, 27965537 - 27965587
Alignment:
Q  411 gcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    ||||||||||||||||||| ||||||||||||| | |||| ||||||||||    
T  27965537 gcacactcccagatcccaagccaataccactaggccaacccaagtgggttt 27965587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 460
Target Start/End: Original strand, 31759676 - 31759734
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    ||||||||||||||||||||  |||||| ||||||||||||||  |||| |||||||||    
T  31759676 tgaggaggagcacactcccaagtcccaagccaataccactagatcaacccaagtgggtt 31759734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 403 - 460
Target Start/End: Complemental strand, 2606493 - 2606436
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    ||||||||||| |||| ||||||| |||||||||||||||| | || |||||||||||    
T  2606493 gaggaggagcatactcacagatcctaaaccaataccactaggccaatctaagtgggtt 2606436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 403 - 460
Target Start/End: Complemental strand, 39509127 - 39509070
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    ||||||||||||||||||||||||||| ||| |||||  |||| |||| |||||||||    
T  39509127 gaggaggagcacactcccagatcccaagccattaccatgagaccaacccaagtgggtt 39509070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 450
Target Start/End: Complemental strand, 17816559 - 17816519
Alignment:
Q  410 agcacactcccagatcccaaaccaataccactagacaaacc 450  Q
    |||||||| ||||||||||||||||||||||||||| ||||    
T  17816559 agcacacttccagatcccaaaccaataccactagaccaacc 17816519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 438
Target Start/End: Complemental strand, 53496935 - 53496899
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaatacc 438  Q
    ||||||||||||||||||||| |||||||||||||||    
T  53496935 tgaggaggagcacactcccaggtcccaaaccaatacc 53496899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 465
Target Start/End: Original strand, 7949472 - 7949535
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtttcatt 465  Q
    |||||||||||||||||| || |||||| |||||||| |||| | | || ||||||||||||||    
T  7949472 tgaggaggagcacactccgaggtcccaagccaataccgctaggccagcccaagtgggtttcatt 7949535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 460
Target Start/End: Complemental strand, 7539648 - 7539590
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    |||| ||||||| |||||||||||| ||| |||||||||||||| || |||| ||||||    
T  7539648 tgagaaggagcatactcccagatccaaaatcaataccactagaccaatctaaatgggtt 7539590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 441
Target Start/End: Complemental strand, 12798741 - 12798703
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccact 441  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  12798741 gaggagcagcacactcccagatctcaaaccaataccact 12798703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 460
Target Start/End: Complemental strand, 37443756 - 37443702
Alignment:
Q  406 gaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    |||||| ||||||||||||||||| |||||||||||||   |||| |||||||||    
T  37443756 gaggagtacactcccagatcccaagccaataccactaggtcaacccaagtgggtt 37443702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 460
Target Start/End: Complemental strand, 46545769 - 46545711
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    ||||||||||||||||| ||| || ||| ||||||||||||| | |||| |||||||||    
T  46545769 tgaggaggagcacactctcaggtctcaagccaataccactaggccaacccaagtgggtt 46545711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 460
Target Start/End: Original strand, 56236937 - 56236991
Alignment:
Q  406 gaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    |||||||||||||||| |||||||  ||||||||| |||| ||||||| ||||||    
T  56236937 gaggagcacactcccatatcccaagtcaataccaccagaccaacctaattgggtt 56236991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 443
Target Start/End: Complemental strand, 8714737 - 8714696
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactag 443  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||    
T  8714737 tgaggaggaacacgctctcagatcccaaaccaataccactag 8714696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 460
Target Start/End: Original strand, 9241048 - 9241101
Alignment:
Q  407 aggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    ||||||||||| ||||||||||| |||||||||| || | |||| |||||||||    
T  9241048 aggagcacactaccagatcccaagccaataccaccaggccaacccaagtgggtt 9241101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 460
Target Start/End: Original strand, 19238596 - 19238653
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    |||||||||||||||||||  |||||| |||||||||| || | |||| |||||||||    
T  19238596 gaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaagtgggtt 19238653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 403 - 443
Target Start/End: Complemental strand, 13015484 - 13015444
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactag 443  Q
    |||||||||||||||||||  |||||| |||||||||||||    
T  13015484 gaggaggagcacactcccaagtcccaagccaataccactag 13015444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 456
Target Start/End: Complemental strand, 13901798 - 13901746
Alignment:
Q  404 aggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtg 456  Q
    ||||||| ||||||||||| || ||| ||||||||||||||| |||| |||||    
T  13901798 aggaggaacacactcccaggtctcaagccaataccactagaccaacccaagtg 13901746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 442
Target Start/End: Complemental strand, 23378014 - 23377974
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccacta 442  Q
    ||||||||||||||||||||| |||||| |||||| |||||    
T  23378014 tgaggaggagcacactcccaggtcccaagccaataacacta 23377974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 407 - 443
Target Start/End: Original strand, 40813341 - 40813377
Alignment:
Q  407 aggagcacactcccagatcccaaaccaataccactag 443  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  40813341 aggagcacactcccagatcccagaccaatatcactag 40813377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 403 - 439
Target Start/End: Original strand, 41346982 - 41347018
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaatacca 439  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  41346982 gaggaggagcatactcccagatctcaaaccaatacca 41347018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 6e-17; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 403 - 460
Target Start/End: Complemental strand, 29075838 - 29075781
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||    
T  29075838 gaggaggagcacactcccagatcccaagccaataccactaggcaaacccaagtgggtt 29075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 30883216 - 30883275
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    ||||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||    
T  30883216 tgaggaggagcacactcccaggtcccaagccaataccactagaccaacccaagtgggttt 30883275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 29692404 - 29692463
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    |||||||||||||||||||||||||||| |||||||||| |||| |||| || |||||||    
T  29692404 tgaggaggagcacactcccagatcccaatccaataccaccagaccaacccaaatgggttt 29692463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 34984864 - 34984805
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    ||||||||||||||||||||| | |||| ||||||||||||||| |||| ||||||||||    
T  34984864 tgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgggttt 34984805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 21549157 - 21549213
Alignment:
Q  404 aggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    ||||||||||||||||||| |||||| ||||||||||||| | |||| |||||||||    
T  21549157 aggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 442
Target Start/End: Complemental strand, 43442254 - 43442214
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccacta 442  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  43442254 tgaggaggagcacactcccagatctcaaaccaataccacta 43442214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 87441 - 87500
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    ||||||||||||||||||||||| ||||  |||||||||||| | |||| ||||||||||    
T  87441 tgaggaggagcacactcccagattccaaggcaataccactaggccaaccgaagtgggttt 87500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 460
Target Start/End: Complemental strand, 16457868 - 16457810
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    |||||||||||||||||| || |||||| |||||||||| || | ||||||||||||||    
T  16457868 tgaggaggagcacactccaaggtcccaagccaataccaccaggccaacctaagtgggtt 16457810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 403 - 460
Target Start/End: Original strand, 14495824 - 14495881
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    |||||||||||||||||||||||||||  ||||||||| |||| |||| || ||||||    
T  14495824 gaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaaatgggtt 14495881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 22737137 - 22737081
Alignment:
Q  405 ggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    ||||||||||||| |||  |||||| ||||||||||||||| |||| ||||||||||    
T  22737137 ggaggagcacacttccaagtcccaagccaataccactagaccaacccaagtgggttt 22737081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 462
Target Start/End: Complemental strand, 26598578 - 26598522
Alignment:
Q  406 gaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtttc 462  Q
    ||||||||||||| |||||||||| ||||||||||||| | || | |||||||||||    
T  26598578 gaggagcacactctcagatcccaagccaataccactaggccaatccaagtgggtttc 26598522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 437
Target Start/End: Original strand, 4793107 - 4793141
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaatac 437  Q
    |||||||||||||||||||| ||||||||||||||    
T  4793107 gaggaggagcacactcccaggtcccaaaccaatac 4793141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 442
Target Start/End: Original strand, 22020882 - 22020920
Alignment:
Q  404 aggaggagcacactcccagatcccaaaccaataccacta 442  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  22020882 aggaggagcacactcccagatcccaagctaataccacta 22020920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 460
Target Start/End: Complemental strand, 25627115 - 25627057
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    ||||||||||||||||||||  | |||| ||||||||||||| | |||| |||||||||    
T  25627115 tgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtt 25627057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 460
Target Start/End: Original strand, 8278294 - 8278351
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    |||||||||||||||||||  |||||| |||||||||  |||| |||| |||||||||    
T  8278294 gaggaggagcacactcccaagtcccaagccaataccatcagaccaacccaagtgggtt 8278351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 460
Target Start/End: Original strand, 8642200 - 8642253
Alignment:
Q  407 aggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    ||||||||| || |||||||||| ||||||||||||||| ||| || |||||||    
T  8642200 aggagcacattctcagatcccaagccaataccactagaccaacatatgtgggtt 8642253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 460
Target Start/End: Complemental strand, 16773864 - 16773807
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    |||||||||||||||||||| ||||||  ||||||||| |||| |||  |||||||||    
T  16773864 gaggaggagcacactcccaggtcccaagtcaataccaccagaccaactcaagtgggtt 16773807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 462
Target Start/End: Complemental strand, 14285219 - 14285159
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtttc 462  Q
    ||||||||||||||||||||| | |||| ||||| ||||| | | |||| |||||||||||    
T  14285219 tgaggaggagcacactcccaggttccaagccaattccactcggccaacccaagtgggtttc 14285159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 410 - 462
Target Start/End: Original strand, 26078077 - 26078129
Alignment:
Q  410 agcacactcccagatcccaaaccaataccactagacaaacctaagtgggtttc 462  Q
    |||| |||||||  |||||||||||||||||||| | |||| |||||||||||    
T  26078077 agcatactcccaagtcccaaaccaataccactaggccaacccaagtgggtttc 26078129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 442
Target Start/End: Original strand, 37258384 - 37258424
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccacta 442  Q
    |||||||||||||||||| ||||||||| | ||||||||||    
T  37258384 tgaggaggagcacactcctagatcccaagctaataccacta 37258424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 6e-17; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 402 - 459
Target Start/End: Original strand, 16918596 - 16918653
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggt 459  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||    
T  16918596 tgaggaggagcacactcccagatcccaaaccaataccactaggccaacccaagtgggt 16918653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 29503329 - 29503270
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    ||||||||||||||||||||| |||||||||||||||||||| | |||| ||||||||||    
T  29503329 tgaggaggagcacactcccaggtcccaaaccaataccactaggccaacccaagtgggttt 29503270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 406 - 461
Target Start/End: Complemental strand, 19322822 - 19322767
Alignment:
Q  406 gaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    ||||||||||||||||| |||||||||||||||||||||  |||| ||||||||||    
T  19322822 gaggagcacactcccaggtcccaaaccaataccactagatcaacccaagtgggttt 19322767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 402 - 460
Target Start/End: Original strand, 42327413 - 42327471
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    ||||||||||||||||||||| |||||| ||||||||||||| | |||| |||||||||    
T  42327413 tgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42327471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 460
Target Start/End: Complemental strand, 28846748 - 28846691
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    |||||||||||||||||||| ||||||  |||||||||||||  ||||||||||||||    
T  28846748 gaggaggagcacactcccaggtcccaagtcaataccactagatcaacctaagtgggtt 28846691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 42602612 - 42602553
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    |||| |||||||||||||||| |||||| ||||||||||||| | |||| ||||||||||    
T  42602612 tgagaaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttt 42602553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 461
Target Start/End: Complemental strand, 1729873 - 1729815
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    |||||||||||||||||||  |||||| ||||||||||||| | |||| ||||||||||    
T  1729873 gaggaggagcacactcccaagtcccaagccaataccactagcccaacccaagtgggttt 1729815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 460
Target Start/End: Complemental strand, 42922472 - 42922414
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    ||||||||||||||||||||| | |||| ||||||||||||| | |||| |||||||||    
T  42922472 tgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 42922414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 406 - 463
Target Start/End: Original strand, 43964010 - 43964067
Alignment:
Q  406 gaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtttca 463  Q
    |||||||||||||| || ||||||||||| || ||||||| |||| ||||||||||||    
T  43964010 gaggagcacactccaaggtcccaaaccaacactactagaccaacccaagtgggtttca 43964067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 458
Target Start/End: Complemental strand, 6760941 - 6760889
Alignment:
Q  406 gaggagcacactcccagatcccaaaccaataccactagacaaacctaagtggg 458  Q
    |||||||| ||||||||||||||||||||||| || |||| |||| |||||||    
T  6760941 gaggagcatactcccagatcccaaaccaatactaccagaccaacccaagtggg 6760889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 462
Target Start/End: Complemental strand, 11251145 - 11251085
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtttc 462  Q
    |||||||||||||||| |||  |||||| ||||||||||||  | ||||||||||||||||    
T  11251145 tgaggaggagcacacttccaagtcccaagccaataccactaagccaacctaagtgggtttc 11251085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 466
Target Start/End: Original strand, 23052541 - 23052605
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtttcattt 466  Q
    ||||||| ||||||||||||  |||||| |||||||||| || | |||||||||||||| |||||    
T  23052541 tgaggagaagcacactcccaagtcccaagccaataccaccaggccaacctaagtgggttacattt 23052605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 462
Target Start/End: Original strand, 23230623 - 23230682
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtttc 462  Q
    ||||||||||||||||||||| ||||||| |||||||||| ||| |||| || ||||||||    
T  23230623 tgaggaggagcacactcccagttcccaaatcaataccact-gaccaacccaattgggtttc 23230682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 34041606 - 34041665
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    ||||||||||||||||| ||||||| ||  |||||||||||| | |||| ||||||||||    
T  34041606 tgaggaggagcacactctcagatcctaagtcaataccactaggccaacccaagtgggttt 34041665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 37480133 - 37480074
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    ||||||||||||||||| ||| |||||| |||||||||| || | |||| ||||||||||    
T  37480133 tgaggaggagcacactctcaggtcccaagccaataccaccaggccaacccaagtgggttt 37480074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 460
Target Start/End: Original strand, 5147697 - 5147755
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    |||| ||||||| ||||||||||| |||  |||||||||||||| |||| |||||||||    
T  5147697 tgagaaggagcatactcccagatctcaagtcaataccactagaccaacccaagtgggtt 5147755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 456
Target Start/End: Complemental strand, 30838123 - 30838069
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtg 456  Q
    |||||||||| ||| ||||| |||||||||||||| ||| |||| ||||||||||    
T  30838123 tgaggaggagaacattcccaaatcccaaaccaatatcaccagaccaacctaagtg 30838069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 457
Target Start/End: Original strand, 33962803 - 33962857
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgg 457  Q
    |||||||||||||||||||| ||||||||||||| || ||| | |||| ||||||    
T  33962803 gaggaggagcacactcccagttcccaaaccaatatcattaggccaacccaagtgg 33962857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 443
Target Start/End: Complemental strand, 12801347 - 12801306
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactag 443  Q
    |||||||||||| || |||||||||||||| |||||||||||    
T  12801347 tgaggaggagcatacccccagatcccaaactaataccactag 12801306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 445
Target Start/End: Original strand, 12994396 - 12994437
Alignment:
Q  404 aggaggagcacactcccagatcccaaaccaataccactagac 445  Q
    ||||||||||||||||||| ||||||  ||||||||||||||    
T  12994396 aggaggagcacactcccaggtcccaagtcaataccactagac 12994437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 459
Target Start/End: Original strand, 23465939 - 23465996
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggt 459  Q
    |||||||||||| ||||||| |||| |||||||||||| ||||| |||| || |||||    
T  23465939 tgaggaggagcatactcccaaatcctaaaccaataccattagaccaacccaaatgggt 23465996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 458
Target Start/End: Original strand, 12086147 - 12086203
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtggg 458  Q
    |||||||||||||||| |||| |||||| |||||||||| || | ||| ||||||||    
T  12086147 tgaggaggagcacacttccaggtcccaagccaataccaccaggccaacttaagtggg 12086203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 442
Target Start/End: Original strand, 17737642 - 17737682
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccacta 442  Q
    ||||||||||||||||||||  || ||||||||||||||||    
T  17737642 tgaggaggagcacactcccaagtcacaaaccaataccacta 17737682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 442
Target Start/End: Original strand, 30410567 - 30410607
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccacta 442  Q
    |||||||||||||||||| || |||||| ||||||||||||    
T  30410567 tgaggaggagcacactcctaggtcccaagccaataccacta 30410607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 6569791 - 6569847
Alignment:
Q  404 aggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    |||||||||||||||||||||||||| |||||| |||||| | ||||||||||||||    
T  6569791 aggaggagcacactcccagatcccaagccaatatcactaggccaacctaagtgggtt 6569847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 406 - 458
Target Start/End: Complemental strand, 7286261 - 7286209
Alignment:
Q  406 gaggagcacactcccagatcccaaaccaataccactagacaaacctaagtggg 458  Q
    ||||||||||||||||||||||||||||||||||||||   ||||||||||||    
T  7286261 gaggagcacactcccagatcccaaaccaataccactaggtcaacctaagtggg 7286209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 403 - 461
Target Start/End: Complemental strand, 16852397 - 16852339
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    |||||||||||||||||||| |||||| ||||||||||||| | |||| ||||||||||    
T  16852397 gaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttt 16852339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 458
Target Start/End: Complemental strand, 2203550 - 2203494
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtggg 458  Q
    ||||||||||||||||||||| |||||| ||||||||||||| | |||| |||||||    
T  2203550 tgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 19703505 - 19703564
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    ||||||||||||||||| ||| |||||| ||||||||||||| | |||| ||||||||||    
T  19703505 tgaggaggagcacactctcaggtcccaagccaataccactaggccaacccaagtgggttt 19703564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 401 - 460
Target Start/End: Original strand, 30483901 - 30483960
Alignment:
Q  401 ctgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    ||||||||||||||||||||| ||||||| ||||||||||| | | |||| |||||||||    
T  30483901 ctgaggaggagcacactcccatatcccaagccaataccactgggccaacccaagtgggtt 30483960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 402 - 463
Target Start/End: Original strand, 44780132 - 44780193
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtttca 463  Q
    ||||||||||||||||||||  |||||| ||||| ||||||| | |||| ||||||||||||    
T  44780132 tgaggaggagcacactcccaagtcccaagccaatgccactaggccaacccaagtgggtttca 44780193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 458
Target Start/End: Complemental strand, 3624634 - 3624582
Alignment:
Q  406 gaggagcacactcccagatcccaaaccaataccactagacaaacctaagtggg 458  Q
    ||||||||||||||||| |||||| ||||||||||||| | |||| |||||||    
T  3624634 gaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 3624582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 463
Target Start/End: Complemental strand, 4830544 - 4830484
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtttca 463  Q
    |||||||| ||||||| |||||||||||| |||||||| || | |||| ||||||||||||    
T  4830544 gaggaggaacacactctcagatcccaaacaaataccaccaggccaacccaagtgggtttca 4830484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 437
Target Start/End: Original strand, 3305206 - 3305241
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaatac 437  Q
    ||||||||||||| ||||||||||||||||||||||    
T  3305206 tgaggaggagcacgctcccagatcccaaaccaatac 3305241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 18897224 - 18897165
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    |||||||||||||||||  || ||||||||||| |||||||| | |||| ||||||||||    
T  18897224 tgaggaggagcacactctaaggtcccaaaccaacaccactaggccaacccaagtgggttt 18897165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 460
Target Start/End: Original strand, 20994479 - 20994534
Alignment:
Q  405 ggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    |||||||||||||||||| ||||||  |||||||||||| | |||| |||||||||    
T  20994479 ggaggagcacactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 20994534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 457
Target Start/End: Complemental strand, 36205253 - 36205198
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgg 457  Q
    |||||||||||||||||||||||| |||||||||| ||  |||| |||| ||||||    
T  36205253 tgaggaggagcacactcccagatctcaaaccaataacatcagaccaacccaagtgg 36205198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 461
Target Start/End: Complemental strand, 5264601 - 5264543
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    ||||||||||||| |||||| | |||| ||||||||||||| | |||| ||||||||||    
T  5264601 gaggaggagcacattcccaggttccaagccaataccactaggccaacccaagtgggttt 5264543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 460
Target Start/End: Complemental strand, 18540356 - 18540298
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    ||||||| || |||||||||| |||||| ||||||||||||| | |||| |||||||||    
T  18540356 tgaggagaagtacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 18540298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 457
Target Start/End: Original strand, 18546381 - 18546435
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgg 457  Q
    |||||||||||  ||| ||| ||||||| |||||||||||||| |||||||||||    
T  18546381 gaggaggagcatgctctcaggtcccaaatcaataccactagaccaacctaagtgg 18546435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 461
Target Start/End: Original strand, 35641920 - 35641978
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    ||||||||||||||||||| ||| ||| || ||||||| |||| |||| ||||||||||    
T  35641920 gaggaggagcacactcccaaatctcaagccgataccaccagaccaacccaagtgggttt 35641978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 440
Target Start/End: Complemental strand, 968419 - 968382
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccac 440  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  968419 gaggaggagcacactcccaggtcccaagccaataccac 968382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 440
Target Start/End: Complemental strand, 7140766 - 7140729
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccac 440  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  7140766 gaggaggagcacacacccagatcccaagccaataccac 7140729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 440
Target Start/End: Original strand, 9555476 - 9555513
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccac 440  Q
    ||||||||||||||||| |||||||||||||| |||||    
T  9555476 gaggaggagcacactcctagatcccaaaccaagaccac 9555513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 460
Target Start/End: Complemental strand, 14254780 - 14254727
Alignment:
Q  407 aggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    ||||||||||||||||||| ||||||||||| |||||   |||| |||||||||    
T  14254780 aggagcacactcccagatctcaaaccaatacaactaggtcaacccaagtgggtt 14254727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 440
Target Start/End: Original strand, 30774755 - 30774792
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccac 440  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  30774755 gaggaggaacacacttccagatcccaaaccaataccac 30774792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 443
Target Start/End: Original strand, 35690082 - 35690123
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactag 443  Q
    |||||||||||| || |||||||||||| |||||||||||||    
T  35690082 tgaggaggagcaaacacccagatcccaagccaataccactag 35690123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 442
Target Start/End: Complemental strand, 6536578 - 6536538
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccacta 442  Q
    |||||||||||||||||| || |||||| ||||||||||||    
T  6536578 tgaggaggagcacactcctaggtcccaagccaataccacta 6536538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 462
Target Start/End: Complemental strand, 28783118 - 28783058
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtttc 462  Q
    ||||||||||||||||||||| || ||| |||||||||| |  | |||| |||||||||||    
T  28783118 tgaggaggagcacactcccaggtctcaagccaataccaccaagccaacccaagtgggtttc 28783058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 402 - 462
Target Start/End: Complemental strand, 46518686 - 46518626
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtttc 462  Q
    |||||||||||||||||||||||||||| ||||||||||||  | |||| |||||||||||    
T  46518686 tgaggaggagcacactcccagatcccaagccaataccactatgccaacccaagtgggtttc 46518626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 7975476 - 7975417
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    |||||||||||||||||||||||||||| || |||||||||| | ||||||| |||||||    
T  7975476 tgaggaggagcacactcccagatcccaagcctataccactaggccaacctaaatgggttt 7975417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 402 - 460
Target Start/End: Complemental strand, 4222199 - 4222141
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    |||||||||||||||||||||||||||| ||||||||||||  | |||| |||||||||    
T  4222199 tgaggaggagcacactcccagatcccaagccaataccactaagccaacccaagtgggtt 4222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 403 - 461
Target Start/End: Complemental strand, 36720438 - 36720380
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    ||||||||||||||||||| ||||||| |||||||||| |||| |||| ||||||||||    
T  36720438 gaggaggagcacactcccatatcccaagccaataccaccagaccaacccaagtgggttt 36720380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 460
Target Start/End: Original strand, 31788989 - 31789046
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    ||||||||||||||||||||||||||| |||||| |||||| | |||| |||||||||    
T  31788989 gaggaggagcacactcccagatcccaagccaataacactaggccaacccaagtgggtt 31789046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 30311364 - 30311305
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    |||||||||||||||||||||||||||| || |||||||||| | |||| | ||||||||    
T  30311364 tgaggaggagcacactcccagatcccaagcctataccactaggccaacccaggtgggttt 30311305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 32651456 - 32651514
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    ||||||||||||||||||||| |||||| ||||||||||||| | || ||||||||||||    
T  32651456 tgaggaggagcacactcccaggtcccaagccaataccactaggccaa-ctaagtgggttt 32651514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 461
Target Start/End: Original strand, 31520624 - 31520682
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    ||||||||||||||||||||||||||| ||||| |||| || | |||| ||||||||||    
T  31520624 gaggaggagcacactcccagatcccaagccaatgccaccaggccaacccaagtgggttt 31520682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 402 - 443
Target Start/End: Original strand, 28928897 - 28928938
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactag 443  Q
    ||||||||||||||||| |||||||||| |||||||||||||    
T  28928897 tgaggaggagcacactctcagatcccaagccaataccactag 28928938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 460
Target Start/End: Original strand, 16354908 - 16354968
Alignment:
Q  400 cctgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    ||||||||||||||||||| ||| | |||| ||||||||||||| | |||| |||||||||    
T  16354908 cctgaggaggagcacactcacaggttccaagccaataccactaggccaacccaagtgggtt 16354968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 459
Target Start/End: Original strand, 47454636 - 47454692
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggt 459  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||  |||| ||||||||    
T  47454636 gaggaggagcacactccaagatctcaagccaataccactagaacaacccaagtgggt 47454692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 439
Target Start/End: Original strand, 51903897 - 51903933
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaatacca 439  Q
    ||||||||||||||||||||||||||| |||||||||    
T  51903897 gaggaggagcacactcccagatcccaagccaatacca 51903933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 462
Target Start/End: Complemental strand, 53413003 - 53412943
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtttc 462  Q
    ||||||||||||||||||||| |  ||| ||||||||||||||| |||| |||||| ||||    
T  53413003 tgaggaggagcacactcccaggttacaagccaataccactagaccaacccaagtggctttc 53412943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 450
Target Start/End: Original strand, 4844530 - 4844577
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacc 450  Q
    |||||||||||||||||||||||||||  ||||||||| |||| ||||    
T  4844530 gaggaggagcacactcccagatcccaagtcaataccaccagaccaacc 4844577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 450
Target Start/End: Original strand, 4870226 - 4870273
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacc 450  Q
    |||||||||||||||||||||||||||  ||||||||| |||| ||||    
T  4870226 gaggaggagcacactcccagatcccaagtcaataccaccagaccaacc 4870273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 461
Target Start/End: Original strand, 18319190 - 18319245
Alignment:
Q  406 gaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    ||||||||||||||||| ||||||||||||||||| |  | ||||||||| |||||    
T  18319190 gaggagcacactcccaggtcccaaaccaataccaccaagccaacctaagtaggttt 18319245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 27093379 - 27093438
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    ||||||||||||||||||||  | |||| ||||||||||||| | |||| ||||||||||    
T  27093379 tgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggttt 27093438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 440
Target Start/End: Complemental strand, 14339668 - 14339630
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccac 440  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  14339668 tgaggaggagcacactcccaaatcccaagccaataccac 14339630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 460
Target Start/End: Original strand, 27923061 - 27923119
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    |||||||||||||||| |||  |||||| |||||||||| || | ||||||||||||||    
T  27923061 tgaggaggagcacacttccatgtcccaagccaataccaccaggccaacctaagtgggtt 27923119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 460
Target Start/End: Original strand, 28703426 - 28703480
Alignment:
Q  406 gaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    |||||||||||||||||||||||| | |||| |||| ||| |||| |||||||||    
T  28703426 gaggagcacactcccagatcccaagctaatatcactggaccaacccaagtgggtt 28703480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 440
Target Start/End: Complemental strand, 2667919 - 2667882
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccac 440  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  2667919 gaggaagagcacactcccagatcccaagccaataccac 2667882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 461
Target Start/End: Original strand, 10499129 - 10499186
Alignment:
Q  404 aggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    |||| ||||| ||||||||||||||| |||||||||| || | |||| ||||||||||    
T  10499129 aggaagagcagactcccagatcccaagccaataccaccaggccaacccaagtgggttt 10499186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 443
Target Start/End: Complemental strand, 35415326 - 35415285
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactag 443  Q
    |||||| | |||||||| ||||||||||||||||||||||||    
T  35415326 tgaggatgggcacactctcagatcccaaaccaataccactag 35415285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 2597240 - 2597296
Alignment:
Q  404 aggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    |||||||||||||||| | |||| || |||||||||| |||| |||| |||||||||    
T  2597240 aggaggagcacactcctaaatccgaagccaataccaccagaccaacccaagtgggtt 2597296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 462
Target Start/End: Original strand, 15048079 - 15048139
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtttc 462  Q
    |||||||||||||| ||||||||||||| || |||||| ||  | |||| |||||||||||    
T  15048079 tgaggaggagcacattcccagatcccaagcctataccattaagccaacccaagtgggtttc 15048139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 37051314 - 37051370
Alignment:
Q  404 aggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    ||||||| ||||||||||||||||||| ||||| ||||| |  |||| |||||||||    
T  37051314 aggaggaacacactcccagatcccaaatcaatatcactaaatcaacccaagtgggtt 37051370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 12188321 - 12188380
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    ||||||||||||||||||||| |||||| ||||||||||||| | |||| ||||||||||    
T  12188321 tgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttt 12188380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 403 - 461
Target Start/End: Complemental strand, 33549161 - 33549103
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    |||||||||||||||||||| |||||| |||||||||| |||| |||| ||||||||||    
T  33549161 gaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggttt 33549103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 442
Target Start/End: Complemental strand, 28363995 - 28363955
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccacta 442  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  28363995 tgaggaggagcacactcgcagatcccaaaccaataccacta 28363955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 404 - 459
Target Start/End: Complemental strand, 14446251 - 14446196
Alignment:
Q  404 aggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggt 459  Q
    |||| ||||||||| ||||||||||||| ||||||||||||| ||||||| |||||    
T  14446251 aggaagagcacacttccagatcccaaacgaataccactagaccaacctaactgggt 14446196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 460
Target Start/End: Complemental strand, 30127454 - 30127400
Alignment:
Q  406 gaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    |||||||||||||||||| ||||| |||||||||| |||| |||| |||||||||    
T  30127454 gaggagcacactcccagaccccaagccaataccaccagaccaacccaagtgggtt 30127400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 461
Target Start/End: Original strand, 31623010 - 31623068
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    |||||||||||||||||||| |||||| ||||||||||  ||| |||| ||||||||||    
T  31623010 gaggaggagcacactcccaggtcccaagccaataccaccggaccaacccaagtgggttt 31623068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 402 - 443
Target Start/End: Original strand, 34293834 - 34293875
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactag 443  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  34293834 tgaggaggagcacactcccaaattccaaaccaataccactag 34293875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 444
Target Start/End: Complemental strand, 24555777 - 24555735
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactaga 444  Q
    |||||||||||| ||||| ||||| ||||||||||||||||||    
T  24555777 tgaggaggagcatactccgagatctcaaaccaataccactaga 24555735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 440
Target Start/End: Original strand, 6776626 - 6776663
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccac 440  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  6776626 gaggaggagcacacccccagatcccaagccaataccac 6776663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 461
Target Start/End: Original strand, 12234531 - 12234584
Alignment:
Q  408 ggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    ||||||||||||||| ||||||  ||||||||| || | |||||||||||||||    
T  12234531 ggagcacactcccaggtcccaagtcaataccaccaggccaacctaagtgggttt 12234584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 440
Target Start/End: Original strand, 13227177 - 13227214
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccac 440  Q
    ||||||||||||||||||||||| || |||||||||||    
T  13227177 gaggaggagcacactcccagatctcataccaataccac 13227214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 460
Target Start/End: Complemental strand, 14558019 - 14557962
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    ||||||||||||||| |||| |||||| |||| ||||| |||| |||| |||||||||    
T  14558019 gaggaggagcacacttccaggtcccaagccaacaccaccagaccaacccaagtgggtt 14557962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 440
Target Start/End: Original strand, 24641209 - 24641246
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccac 440  Q
    |||||||||||||||||||||||||||  |||||||||    
T  24641209 gaggaggagcacactcccagatcccaagtcaataccac 24641246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 460
Target Start/End: Original strand, 1992275 - 1992322
Alignment:
Q  412 cacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    ||||||||||||||| |||||||||||| ||||| || |||||||||||    
T  1992275 cacactcccagatcc-aaaccaataccattagaccaatctaagtgggtt 1992322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 464
Target Start/End: Complemental strand, 24617139 - 24617075
Alignment:
Q  400 cctgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtttcat 464  Q
    |||||||||||||| ||| | ||||| |||||||||||||| |||  |||| ||||| |||||||    
T  24617139 cctgaggaggagcatacttctagatctcaaaccaataccacgagatcaacccaagtgagtttcat 24617075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 457
Target Start/End: Original strand, 15786338 - 15786393
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgg 457  Q
    |||||||||||||||||||||||||||| ||||||| ||||||| |||| ||||||    
T  15786338 tgaggaggagcacactcccagatcccaagccaatactactagaccaacccaagtgg 15786393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 41508889 - 41508830
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    |||||||||||||||||||||||||||||||| |||||| || | |||| ||||||||||    
T  41508889 tgaggaggagcacactcccagatcccaaaccagtaccaccaggccaacccaagtgggttt 41508830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 402 - 460
Target Start/End: Original strand, 9165213 - 9165271
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    ||||||||||||||||||||| |||||| ||||||||||||| | |||| |||||||||    
T  9165213 tgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 9165271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 402 - 460
Target Start/End: Complemental strand, 51703837 - 51703779
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    ||||||||||||||||||||||| |||| ||||||||||||||| |||| || ||||||    
T  51703837 tgaggaggagcacactcccagattccaagccaataccactagaccaacccaaatgggtt 51703779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 443
Target Start/End: Original strand, 8177200 - 8177241
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactag 443  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  8177200 tgaggaggagcacactcccagatcccaagccaataccactag 8177241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 462
Target Start/End: Complemental strand, 6650653 - 6650593
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtttc 462  Q
    |||||||||||| |||||| |||||||| ||||||||||||| | ||||||| ||||||||    
T  6650653 tgaggaggagcatactccccgatcccaagccaataccactaggccaacctaattgggtttc 6650593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 403 - 443
Target Start/End: Complemental strand, 17410288 - 17410248
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactag 443  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  17410288 gaggaggaccacactcccagatcccaaaccaataccactag 17410248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 458
Target Start/End: Original strand, 33700791 - 33700847
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtggg 458  Q
    ||||||||||||||||||||||| |||| ||||||||||||| | |||| |||||||    
T  33700791 tgaggaggagcacactcccagattccaagccaataccactaggccaacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 462
Target Start/End: Complemental strand, 36371528 - 36371468
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtttc 462  Q
    ||||||||||||||||||||| | |||| ||||||||||||| | |||| |||||||||||    
T  36371528 tgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttc 36371468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 442
Target Start/End: Original strand, 44046166 - 44046206
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccacta 442  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  44046166 tgaggaggagcacactcccagatcccaagccaataccacta 44046206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 403 - 462
Target Start/End: Original strand, 45235398 - 45235457
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtttc 462  Q
    |||||||||||||||||||  ||||||||||||||||  |||| |||| |||||||||||    
T  45235398 gaggaggagcacactcccaagtcccaaaccaataccatcagaccaacccaagtgggtttc 45235457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 404 - 443
Target Start/End: Original strand, 52336794 - 52336833
Alignment:
Q  404 aggaggagcacactcccagatcccaaaccaataccactag 443  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  52336794 aggaggagcacactcccagatcccaagccaataccactag 52336833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 461
Target Start/End: Complemental strand, 25297829 - 25297771
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    |||||||||||||||| ||||||| ||  |||||||||||||| |||| ||||||||||    
T  25297829 gaggaggagcacactctcagatcctaagtcaataccactagaccaacccaagtgggttt 25297771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 407 - 457
Target Start/End: Original strand, 26232409 - 26232459
Alignment:
Q  407 aggagcacactcccagatcccaaaccaataccactagacaaacctaagtgg 457  Q
    ||||||||||||||||||| ||| ||||||||||||||| |||| ||||||    
T  26232409 aggagcacactcccagatctcaagccaataccactagaccaacccaagtgg 26232459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 460
Target Start/End: Original strand, 31794282 - 31794340
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    ||||||||||||||||||||  |||||| ||||||||||||| | |||| |||||||||    
T  31794282 tgaggaggagcacactcccaagtcccaagccaataccactaggccaacccaagtgggtt 31794340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 461
Target Start/End: Complemental strand, 4566608 - 4566547
Alignment:
Q  400 cctgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    ||||||||||||||||||||||| | |||| |||||| |||||| | |||| ||||||||||    
T  4566608 cctgaggaggagcacactcccaggttccaagccaatatcactaggccaacccaagtgggttt 4566547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 460
Target Start/End: Complemental strand, 2799920 - 2799862
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    |||||||||||||||||||||||| ||| || |||||||||| | || | |||||||||    
T  2799920 tgaggaggagcacactcccagatctcaagcctataccactaggccaagcgaagtgggtt 2799862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 460
Target Start/End: Complemental strand, 10526881 - 10526823
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    |||||||||||| |||||||| |||||| ||||||||||| ||| |||| || ||||||    
T  10526881 tgaggaggagcaaactcccaggtcccaagccaataccactggaccaacccaaatgggtt 10526823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 460
Target Start/End: Original strand, 19528345 - 19528403
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    |||||||||||||||||  ||||||||| |||||||||| || | |||| |||||||||    
T  19528345 tgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaagtgggtt 19528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 461
Target Start/End: Complemental strand, 29056434 - 29056376
Alignment:
Q  404 aggaggagcacactcccagatcccaaacc-aataccactagacaaacctaagtgggttt 461  Q
    |||| |||||||||||||| ||||||||| ||||||||| ||| |||| ||||||||||    
T  29056434 aggatgagcacactcccaggtcccaaaccaaataccactggaccaacccaagtgggttt 29056376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 460
Target Start/End: Complemental strand, 30420368 - 30420310
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    |||||||||||||||||| | ||||||| |||| |||||| | | ||||||||||||||    
T  30420368 tgaggaggagcacactcctatatcccaagccaaaaccacttggccaacctaagtgggtt 30420310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 461
Target Start/End: Complemental strand, 40257456 - 40257398
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggttt 461  Q
    |||||||||||||||||||| || ||| |||||||||| || | |||| ||||||||||    
T  40257456 gaggaggagcacactcccaggtctcaagccaataccaccaggccaacccaagtgggttt 40257398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 466
Target Start/End: Complemental strand, 31049669 - 31049603
Alignment:
Q  404 aggaggagcacactcccagatcccaaaccaatacca----ctagacaaacctaagtgggtttcattt 466  Q
    |||||||||||||||| ||||||||| |||||| ||    |||| | ||||||||||||||||||||    
T  31049669 aggaggagcacactcctagatcccaagccaatatcaatagctaggccaacctaagtgggtttcattt 31049603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 459
Target Start/End: Original strand, 18459251 - 18459307
Alignment:
Q  404 aggaggagcacactcccagatcccaaaccaa-taccactagacaaacctaagtgggt 459  Q
    ||||||||||||||||||  |||||| |||| ||||||||||| |||| ||||||||    
T  18459251 aggaggagcacactcccaagtcccaagccaattaccactagaccaacccaagtgggt 18459307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 440
Target Start/End: Original strand, 31383818 - 31383854
Alignment:
Q  404 aggaggagcacactcccagatcccaaaccaataccac 440  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  31383818 aggaggagcacactcccaggtcccaagccaataccac 31383854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 460
Target Start/End: Original strand, 15342 - 15399
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    |||||||||||||||||||| |||||| |||||||||| |||| |||| |||||||||    
T  15342 gaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggtt 15399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 440
Target Start/End: Original strand, 2488 - 2526
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccac 440  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  2488 tgaggaggagcacactcccagatccaaaaccaataccac 2526  T

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Target: scaffold0178 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 460
Target Start/End: Original strand, 6652 - 6710
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    ||||||||| ||||||||||  ||| |||||||||||||||||  ||||||||||||||    
T  6652 tgaggaggaacacactcccaagtcctaaaccaataccactagatcaacctaagtgggtt 6710  T

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Target: scaffold0004 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 456
Target Start/End: Original strand, 81582 - 81636
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtg 456  Q
    |||||||||||||||| |||||| ||||||||||| |||||||| |||| |||||    
T  81582 tgaggaggagcacacttccagattccaaaccaatatcactagaccaaccaaagtg 81636  T

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Target: scaffold0299 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 403 - 440
Target Start/End: Complemental strand, 11585 - 11548
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccac 440  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  11585 gaggaggagcacactcccagatcccaagccaataccac 11548  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 457
Target Start/End: Original strand, 94989 - 95044
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgg 457  Q
    ||||||||||||||||||||| | |||| ||||||||||||| | |||| ||||||    
T  94989 tgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgg 95044  T

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Target: scaffold0194 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 440
Target Start/End: Original strand, 13064 - 13102
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccac 440  Q
    |||||||||||||||||||||||| ||| ||||||||||    
T  13064 tgaggaggagcacactcccagatctcaagccaataccac 13102  T

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Target: scaffold0118 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 460
Target Start/End: Original strand, 44126 - 44180
Alignment:
Q  406 gaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    |||||||||||||||||||| ||| |||||| || ||||  ||||||||||||||    
T  44126 gaggagcacactcccagatctcaagccaatatcaatagatcaacctaagtgggtt 44180  T

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Target: scaffold0118; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 460
Target Start/End: Original strand, 41652 - 41709
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    ||||||||||| |||| |||||| ||| ||||||||||||| | |||| |||||||||    
T  41652 gaggaggagcatactctcagatctcaagccaataccactaggccaacccaagtgggtt 41709  T

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Target: scaffold0086 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 460
Target Start/End: Complemental strand, 47440 - 47382
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    ||||||||| || |||||||||||| || |||||||||| || |||||| |||||||||    
T  47440 tgaggaggaacatactcccagatcctaagccaataccacaaggcaaacccaagtgggtt 47382  T

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Target: scaffold0063 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 460
Target Start/End: Original strand, 35407 - 35465
Alignment:
Q  402 tgaggaggagcacactcccagatcccaaaccaataccactagacaaacctaagtgggtt 460  Q
    |||||||||||| ||||| |||| |||| ||||||||||| | |||||| |||||||||    
T  35407 tgaggaggagcatactcctagattccaagccaataccactgggcaaaccgaagtgggtt 35465  T

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Target: scaffold1367 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 440
Target Start/End: Original strand, 859 - 896
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaataccac 440  Q
    ||||||||||||| ||||||||||||| ||||||||||    
T  859 gaggaggagcacattcccagatcccaagccaataccac 896  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 403 - 439
Target Start/End: Original strand, 157006 - 157042
Alignment:
Q  403 gaggaggagcacactcccagatcccaaaccaatacca 439  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  157006 gaggaggagcacactcccagatctcaagccaatacca 157042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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