View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20899_high_12 (Length: 302)

Name: NF20899_high_12
Description: NF20899
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20899_high_12
NF20899_high_12
[»] chr6 (23 HSPs)
chr6 (15-278)||(23837793-23838055)
chr6 (85-278)||(4476660-4476853)
chr6 (15-181)||(25396258-25396425)
chr6 (147-273)||(18137715-18137844)
chr6 (122-275)||(25772831-25772985)
chr6 (56-181)||(18315776-18315902)
chr6 (56-181)||(22798316-22798442)
chr6 (147-254)||(21469963-21470071)
chr6 (80-181)||(23105447-23105548)
chr6 (82-181)||(24720853-24720953)
chr6 (147-254)||(21476464-21476572)
chr6 (80-188)||(17414243-17414351)
chr6 (147-201)||(9185720-9185775)
chr6 (16-110)||(21565994-21566087)
chr6 (33-94)||(9186654-9186715)
chr6 (50-110)||(18788618-18788678)
chr6 (50-110)||(18799598-18799658)
chr6 (80-188)||(29416290-29416398)
chr6 (80-178)||(14375131-14375230)
chr6 (145-176)||(23620992-23621023)
chr6 (25-84)||(24513643-24513702)
chr6 (80-188)||(10582659-10582769)
chr6 (139-187)||(14132921-14132969)
[»] scaffold0337 (1 HSPs)
scaffold0337 (15-278)||(9960-10223)
[»] chr7 (29 HSPs)
chr7 (15-278)||(14421567-14421830)
chr7 (15-278)||(18607078-18607341)
chr7 (15-278)||(147283-147546)
chr7 (85-278)||(18872162-18872355)
chr7 (85-278)||(14566004-14566197)
chr7 (85-278)||(16008380-16008573)
chr7 (113-275)||(16575224-16575386)
chr7 (113-275)||(16590276-16590438)
chr7 (123-273)||(21519037-21519189)
chr7 (123-273)||(16668327-16668480)
chr7 (123-273)||(17642697-17642850)
chr7 (53-181)||(16475928-16476056)
chr7 (18-110)||(13678609-13678702)
chr7 (142-273)||(14038816-14038950)
chr7 (142-273)||(14348846-14348980)
chr7 (80-181)||(12694842-12694943)
chr7 (80-181)||(15142455-15142556)
chr7 (56-181)||(16073764-16073889)
chr7 (231-278)||(10897018-10897065)
chr7 (142-213)||(15690165-15690237)
chr7 (142-213)||(15697758-15697830)
chr7 (80-188)||(45185695-45185802)
chr7 (80-181)||(11857521-11857623)
chr7 (16-110)||(16676470-16676563)
chr7 (16-110)||(17650706-17650799)
chr7 (25-94)||(21231808-21231877)
chr7 (231-275)||(41782989-41783033)
chr7 (135-188)||(14169408-14169461)
chr7 (135-188)||(14178882-14178935)
[»] chr1 (22 HSPs)
chr1 (15-278)||(20438234-20438496)
chr1 (85-278)||(16371833-16372026)
chr1 (83-278)||(29535113-29535308)
chr1 (83-278)||(13226925-13227120)
chr1 (80-275)||(21986724-21986920)
chr1 (80-275)||(21745422-21745620)
chr1 (80-275)||(21734231-21734428)
chr1 (18-110)||(11157289-11157381)
chr1 (147-273)||(24475554-24475681)
chr1 (123-208)||(25092151-25092237)
chr1 (56-181)||(21698351-21698476)
chr1 (60-181)||(23631210-23631331)
chr1 (25-94)||(18711910-18711979)
chr1 (57-181)||(20108307-20108432)
chr1 (57-181)||(41312401-41312525)
chr1 (80-188)||(11140823-11140932)
chr1 (80-181)||(30491260-30491361)
chr1 (56-181)||(20086279-20086405)
chr1 (80-188)||(23195286-23195395)
chr1 (57-184)||(5380879-5381007)
chr1 (145-176)||(20901387-20901418)
chr1 (135-188)||(15316382-15316435)
[»] chr4 (20 HSPs)
chr4 (15-278)||(18212350-18212613)
chr4 (83-278)||(30146981-30147176)
chr4 (123-273)||(15075526-15075677)
chr4 (81-181)||(15546854-15546954)
chr4 (80-188)||(16228941-16229049)
chr4 (84-181)||(18271519-18271617)
chr4 (113-181)||(18261554-18261622)
chr4 (80-181)||(53905136-53905238)
chr4 (81-181)||(15004864-15004965)
chr4 (29-178)||(15407167-15407316)
chr4 (80-188)||(4830912-4831020)
chr4 (80-188)||(4834207-4834315)
chr4 (80-181)||(30238003-30238107)
chr4 (148-208)||(15318222-15318283)
chr4 (145-176)||(9388195-9388226)
chr4 (145-176)||(13878034-13878065)
chr4 (47-110)||(14485835-14485898)
chr4 (79-188)||(14821603-14821713)
chr4 (80-188)||(18166106-18166216)
chr4 (231-275)||(27849384-27849428)
[»] chr3 (20 HSPs)
chr3 (15-278)||(9533062-9533325)
chr3 (85-278)||(23371564-23371757)
chr3 (85-278)||(14763818-14764011)
chr3 (85-278)||(51300397-51300590)
chr3 (80-275)||(24284252-24284448)
chr3 (80-275)||(42109343-42109539)
chr3 (80-273)||(15011743-15011939)
chr3 (147-273)||(1989071-1989198)
chr3 (80-181)||(16823628-16823729)
chr3 (15-108)||(18914262-18914355)
chr3 (82-188)||(15954776-15954882)
chr3 (16-110)||(55499929-55500022)
chr3 (57-188)||(35984931-35985063)
chr3 (82-188)||(15934781-15934887)
chr3 (135-181)||(12153108-12153154)
chr3 (148-208)||(12855742-12855803)
chr3 (57-181)||(13036783-13036908)
chr3 (83-187)||(13692173-13692278)
chr3 (25-84)||(17243447-17243506)
chr3 (25-84)||(18889270-18889330)
[»] chr2 (23 HSPs)
chr2 (15-278)||(9241545-9241807)
chr2 (85-278)||(6261236-6261429)
chr2 (85-278)||(19662512-19662705)
chr2 (80-275)||(17634050-17634248)
chr2 (113-231)||(6482558-6482676)
chr2 (113-231)||(6486025-6486143)
chr2 (85-188)||(30644138-30644241)
chr2 (120-263)||(23148776-23148921)
chr2 (120-263)||(23560566-23560711)
chr2 (15-109)||(23264263-23264357)
chr2 (15-110)||(23062830-23062925)
chr2 (15-96)||(21073733-21073814)
chr2 (80-181)||(20914155-20914256)
chr2 (25-94)||(21907542-21907611)
chr2 (80-188)||(20648321-20648429)
chr2 (80-181)||(22860558-22860659)
chr2 (142-202)||(22841192-22841254)
chr2 (57-187)||(24669622-24669753)
chr2 (82-188)||(19035729-19035835)
chr2 (145-176)||(22109681-22109712)
chr2 (16-110)||(23102265-23102358)
chr2 (147-187)||(21903409-21903449)
chr2 (121-181)||(25365784-25365844)
[»] scaffold0026 (3 HSPs)
scaffold0026 (85-278)||(110489-110682)
scaffold0026 (80-188)||(25001-25110)
scaffold0026 (139-188)||(35811-35860)
[»] chr5 (21 HSPs)
chr5 (85-278)||(37598974-37599167)
chr5 (85-278)||(22336403-22336596)
chr5 (85-278)||(28371113-28371306)
chr5 (85-278)||(22339941-22340134)
chr5 (85-278)||(42960376-42960571)
chr5 (128-278)||(38145485-38145635)
chr5 (113-231)||(19511236-19511354)
chr5 (80-263)||(17022602-17022788)
chr5 (15-96)||(23112490-23112571)
chr5 (80-181)||(10035370-10035471)
chr5 (84-180)||(23444008-23444104)
chr5 (80-181)||(18819161-18819262)
chr5 (80-181)||(21901683-21901784)
chr5 (57-181)||(21888808-21888932)
chr5 (57-181)||(25013810-25013934)
chr5 (80-181)||(15193821-15193921)
chr5 (25-94)||(18408765-18408834)
chr5 (86-188)||(10817019-10817121)
chr5 (16-110)||(22439533-22439626)
chr5 (120-181)||(21495118-21495179)
chr5 (80-188)||(23539046-23539154)
[»] scaffold0544 (1 HSPs)
scaffold0544 (85-278)||(2537-2730)
[»] scaffold0462 (1 HSPs)
scaffold0462 (80-275)||(9053-9248)
[»] chr8 (14 HSPs)
chr8 (80-275)||(33089037-33089233)
chr8 (80-275)||(25624483-25624679)
chr8 (113-231)||(44476473-44476591)
chr8 (113-231)||(44479735-44479853)
chr8 (121-275)||(20011982-20012137)
chr8 (80-180)||(22743959-22744059)
chr8 (15-110)||(18613370-18613465)
chr8 (80-181)||(21683510-21683612)
chr8 (80-181)||(21687859-21687961)
chr8 (80-181)||(20005446-20005547)
chr8 (80-188)||(21690253-21690361)
chr8 (142-273)||(22521673-22521808)
chr8 (142-202)||(15267426-15267488)
chr8 (145-176)||(15003868-15003899)
[»] scaffold0201 (1 HSPs)
scaffold0201 (80-275)||(26456-26651)
[»] scaffold0669 (1 HSPs)
scaffold0669 (120-275)||(1582-1738)
[»] scaffold0480 (1 HSPs)
scaffold0480 (142-275)||(635-770)
[»] scaffold0020 (1 HSPs)
scaffold0020 (15-109)||(102731-102825)
[»] scaffold1427 (1 HSPs)
scaffold1427 (15-96)||(1182-1263)
[»] scaffold0139 (2 HSPs)
scaffold0139 (15-110)||(15800-15895)
scaffold0139 (139-180)||(2803-2844)
[»] scaffold0371 (1 HSPs)
scaffold0371 (147-273)||(6897-7025)
[»] scaffold0192 (2 HSPs)
scaffold0192 (143-273)||(31667-31800)
scaffold0192 (142-273)||(21000-21134)
[»] scaffold0064 (1 HSPs)
scaffold0064 (83-153)||(68148-68218)
[»] scaffold0028 (3 HSPs)
scaffold0028 (21-96)||(65265-65340)
scaffold0028 (143-207)||(92487-92551)
scaffold0028 (15-59)||(1265-1309)
[»] scaffold1853 (1 HSPs)
scaffold1853 (80-181)||(627-728)
[»] scaffold1336 (1 HSPs)
scaffold1336 (173-273)||(660-761)
[»] scaffold0317 (1 HSPs)
scaffold0317 (18-110)||(502-595)
[»] scaffold0053 (3 HSPs)
scaffold0053 (80-181)||(72723-72824)
scaffold0053 (79-181)||(46547-46649)
scaffold0053 (15-188)||(82028-82203)
[»] scaffold0004 (2 HSPs)
scaffold0004 (17-106)||(116018-116106)
scaffold0004 (142-264)||(384335-384459)
[»] scaffold0253 (1 HSPs)
scaffold0253 (80-273)||(5417-5615)
[»] scaffold0244 (2 HSPs)
scaffold0244 (57-181)||(44-168)
scaffold0244 (57-181)||(13854-13978)
[»] scaffold0180 (1 HSPs)
scaffold0180 (57-181)||(12681-12804)
[»] scaffold0091 (2 HSPs)
scaffold0091 (80-181)||(22568-22669)
scaffold0091 (80-181)||(26765-26866)
[»] scaffold0054 (1 HSPs)
scaffold0054 (57-178)||(61816-61936)
[»] scaffold0039 (1 HSPs)
scaffold0039 (80-181)||(3607-3707)
[»] scaffold0485 (1 HSPs)
scaffold0485 (142-273)||(2921-3056)
[»] scaffold0261 (2 HSPs)
scaffold0261 (84-181)||(10482-10580)
scaffold0261 (84-181)||(18661-18759)
[»] scaffold1061 (1 HSPs)
scaffold1061 (25-102)||(1555-1632)
[»] scaffold0007 (1 HSPs)
scaffold0007 (80-188)||(207538-207647)
[»] scaffold0331 (1 HSPs)
scaffold0331 (80-188)||(18743-18851)
[»] scaffold0165 (1 HSPs)
scaffold0165 (120-188)||(18146-18214)
[»] scaffold0069 (2 HSPs)
scaffold0069 (142-213)||(29497-29569)
scaffold0069 (142-208)||(34743-34810)
[»] scaffold0011 (2 HSPs)
scaffold0011 (142-213)||(21550-21622)
scaffold0011 (80-188)||(154379-154487)
[»] scaffold0326 (1 HSPs)
scaffold0326 (83-181)||(5216-5313)
[»] scaffold0077 (1 HSPs)
scaffold0077 (16-110)||(4424-4517)
[»] scaffold1098 (1 HSPs)
scaffold1098 (80-188)||(2185-2294)
[»] scaffold0395 (1 HSPs)
scaffold0395 (123-188)||(7307-7372)
[»] scaffold1290 (1 HSPs)
scaffold1290 (80-188)||(1081-1188)
[»] scaffold0249 (1 HSPs)
scaffold0249 (15-107)||(7569-7661)
[»] scaffold0167 (1 HSPs)
scaffold0167 (57-181)||(20090-20214)
[»] scaffold0021 (1 HSPs)
scaffold0021 (80-188)||(146812-146920)
[»] scaffold0585 (1 HSPs)
scaffold0585 (142-208)||(8373-8440)
[»] scaffold0235 (2 HSPs)
scaffold0235 (29-96)||(15064-15131)
scaffold0235 (25-96)||(15751-15822)
[»] scaffold0107 (1 HSPs)
scaffold0107 (25-84)||(41401-41460)
[»] scaffold0476 (1 HSPs)
scaffold0476 (16-110)||(4106-4199)
[»] scaffold0790 (1 HSPs)
scaffold0790 (57-181)||(4722-4847)
[»] scaffold0461 (2 HSPs)
scaffold0461 (25-94)||(870-939)
scaffold0461 (25-94)||(7806-7875)
[»] scaffold0434 (1 HSPs)
scaffold0434 (80-188)||(1174-1282)
[»] scaffold0860 (1 HSPs)
scaffold0860 (145-176)||(522-553)
[»] scaffold0609 (1 HSPs)
scaffold0609 (145-176)||(4726-4757)
[»] scaffold0556 (1 HSPs)
scaffold0556 (145-176)||(9910-9941)
[»] scaffold0156 (1 HSPs)
scaffold0156 (80-188)||(25833-25943)
[»] scaffold0005 (1 HSPs)
scaffold0005 (79-188)||(17996-18106)
[»] scaffold0751 (1 HSPs)
scaffold0751 (135-188)||(650-703)
[»] scaffold0108 (1 HSPs)
scaffold0108 (57-177)||(45761-45882)
[»] scaffold0035 (1 HSPs)
scaffold0035 (80-181)||(817-918)
[»] scaffold0008 (1 HSPs)
scaffold0008 (120-181)||(124791-124852)
[»] scaffold0003 (1 HSPs)
scaffold0003 (57-188)||(80966-81098)
[»] scaffold0178 (1 HSPs)
scaffold0178 (121-181)||(25687-25747)
[»] scaffold0124 (1 HSPs)
scaffold0124 (38-94)||(43820-43876)
[»] scaffold0117 (1 HSPs)
scaffold0117 (147-187)||(33929-33969)
[»] scaffold0049 (1 HSPs)
scaffold0049 (140-188)||(53513-53561)


Alignment Details
Target: chr6 (Bit Score: 248; Significance: 1e-138; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 15 - 278
Target Start/End: Complemental strand, 23838055 - 23837793
Alignment:
Q  15 tggagatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaatcttt 114  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  23838055 tggagatgattgagtatgaaaccaagtgaacatatactatgttgaatgaactttatgcattagtt-gattatgattaattgtgtattttctggaatcgtt 23837957  T
Q  115 ggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattattaa 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23837956 ggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattattaa 23837857  T
Q  215 ttggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23837856 ttggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 23837793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 85 - 278
Target Start/End: Complemental strand, 4476853 - 4476660
Alignment:
Q  85 atgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 184  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4476853 atgattaattgtgtattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 4476754  T
Q  185 aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 278  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4476753 aattcttttcaaaggttgaagtattattaattgaattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 4476660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 181
Target Start/End: Complemental strand, 25396425 - 25396258
Alignment:
Q  15 tggagatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgtgta-ttttctggaatctt 113  Q
    |||| ||||||||||||||||||||||||| ||||||||  |||||||||||| |||||||||| ||||||| |||||||||| | ||||||| |||       
T  25396425 tggatatgattgagtatgaaaccaagtgaatatatactaggttgaatgaacttgatgcattagtatgattattattaattgtgcatttttctgaaattgg 25396326  T
Q  114 tggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 181  Q
    ||||    || |||||  || ||||||||||||||||||  || ||||||| ||||| ||||||||||    
T  25396325 tggactggttttgatgatttgttgttgactgtgatgtatgcttttatttaattaaatcatacatgttg 25396258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 273
Target Start/End: Complemental strand, 18137844 - 18137715
Alignment:
Q  147 atgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattattaattggattgtcgag-gtg-aagtcatatttac 243  Q
    |||||||||||||| |||||||||||||||||| | |||| ||| ||||||||||||| |||| || | ||||||||| | | ||| |||||||||| |     
T  18137844 atgtatatttatatataaataaattatacatgtagttgaatttcatttcaaaggttgaggtatcatcagttggattgttgggagtgtaagtcatattcat 18137745  T
Q  244 atatatgcattgatgagtagtggttgtcgt 273  Q
    | |||||||||| |||||||| ||||||||    
T  18137744 aaatatgcattgttgagtagtagttgtcgt 18137715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 122 - 275
Target Start/End: Complemental strand, 25772985 - 25772831
Alignment:
Q  122 ttatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattattaattggat 220  Q
    |||||||| ||| ||| || |||| ||||||| ||||||| ||||||||| | ||||||| |||| ||| |||||||| ||||||||| |||||| | ||    
T  25772985 ttatgatgaattgttgatggctgttatgtataattatatt-aaataaattttgcatgttgttgaatttcatttcaaagattgaagtatcattaatggaat 25772887  T
Q  221 tgtcgaggtg-aagtcatatttacatatatgcattgatgagtagtggttgtcgttg 275  Q
    ||| || ||| |||||||||| | | |||||||||| |||| ||| ||||||||||    
T  25772886 tgttgaagtgtaagtcatattcataaatatgcattgttgagcagttgttgtcgttg 25772831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 181
Target Start/End: Original strand, 18315776 - 18315902
Alignment:
Q  56 ttgaatgaactttatgcattagtttgattatgattaattgtgtatttt-ctggaatctttggatcaattatgatggattattgttgactgtgatgtatat 154  Q
    |||||||||||| ||| || ||  |||||| ||| ||||||||||||| ||||||| ||||||| ||||||| ||  || ||| ||||| |||||||| |    
T  18315776 ttgaatgaacttgatgtatgagcatgattaagatcaattgtgtattttgctggaatttttggattaattatgttgatttgttgatgactatgatgtatgt 18315875  T
Q  155 ttatatttaaataaattatacatgttg 181  Q
    |||||| ||| ||||| ||||||||||    
T  18315876 ttatatctaattaaatcatacatgttg 18315902  T

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Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 181
Target Start/End: Original strand, 22798316 - 22798442
Alignment:
Q  56 ttgaatgaactttatgcattagtttgattatgattaattgtgta-ttttctggaatctttggatcaattatgatggattattgttgactgtgatgtatat 154  Q
    |||||||||||| ||| || ||  |||||||||||||||||||| |||| ||||||  |||||| ||||||| ||  || ||| ||| |||||||||| |    
T  22798316 ttgaatgaacttgatgaatgagcatgattatgattaattgtgtatttttttggaattgttggattaattatgctgatttgttgatgattgtgatgtatgt 22798415  T
Q  155 ttatatttaaataaattatacatgttg 181  Q
    ||| |||||| ||||| ||||||||||    
T  22798416 ttacatttaattaaatcatacatgttg 22798442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 254
Target Start/End: Complemental strand, 21470071 - 21469963
Alignment:
Q  147 atgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattattaattggattgtcgaggtg-aagtcatatttaca 244  Q
    ||||||||||||||| ||||||||||||||||||| |||| ||| |||||||| ||||||||| ||||||   ||||| |||||| |||||||||| | |    
T  21470071 atgtatatttatatt-aaataaattatacatgttgttgaatttcatttcaaagattgaagtatcattaatgaaattgttgaggtgtaagtcatattcata 21469973  T
Q  245 tatatgcatt 254  Q
     |||||||||    
T  21469972 aatatgcatt 21469963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 80 - 181
Target Start/End: Complemental strand, 23105548 - 23105447
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    |||||||| ||||||||| ||| ||||||||  ||||||  |||||||||  || ||| |||||||||||||| |||| |||||| ||||| ||||||||    
T  23105548 tgattatgtttaattgtggattctctggaattgttggattgattatgatgatttgttgatgactgtgatgtatgtttacatttaactaaatcatacatgt 23105449  T
Q  180 tg 181  Q
    ||    
T  23105448 tg 23105447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 82 - 181
Target Start/End: Complemental strand, 24720953 - 24720853
Alignment:
Q  82 attatgattaattgtgtatttt-ctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgtt 180  Q
    |||||||||||| ||||||||| |||||||  ||||||  ||| | ||||  | ||| |||||||||||||| ||||||||||||||||| |||||||||    
T  24720953 attatgattaatggtgtatttttctggaattgttggattgattttaatggtctgttgatgactgtgatgtatgtttatatttaaataaatcatacatgtt 24720854  T
Q  181 g 181  Q
    |    
T  24720853 g 24720853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 254
Target Start/End: Complemental strand, 21476572 - 21476464
Alignment:
Q  147 atgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattattaattggattgtcgaggtg-aagtcatatttaca 244  Q
    ||||||||||||||| ||||||||||||||| ||| |||| ||| |||||||| ||||||||| |||||| | ||||| |||||| || ||||||| | |    
T  21476572 atgtatatttatatt-aaataaattatacatattgttgaatttcatttcaaagattgaagtatcattaatggaattgttgaggtgtaaatcatattcata 21476474  T
Q  245 tatatgcatt 254  Q
     |||||||||    
T  21476473 aatatgcatt 21476464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 17414351 - 17414243
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    |||||||||||| ||||| ||||||||||||  ||| ||  |||||||||   | ||||| ||||||||||||  || ||||||| ||||| ||||||||    
T  17414351 tgattatgattagttgtgcattttctggaattattgaattgattatgatgatctgttgttaactgtgatgtatgattttatttaattaaatcatacatgt 17414252  T
Q  180 tgctgaatt 188  Q
    || ||||||    
T  17414251 tgttgaatt 17414243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 201
Target Start/End: Original strand, 9185720 - 9185775
Alignment:
Q  147 atgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggtt 201  Q
    |||||||||||||||||||||||||||||| |||| |||| ||| |||||||||||    
T  9185720 atgtatatttatatttaaataaattatacaagttgttgaatttcatttcaaaggtt 9185775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 21565994 - 21566087
Alignment:
Q  16 ggagatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaat 110  Q
    ||||||||||||||||||| ||||||||  | | ||||| |||||||||||| ||||||| || | | ||| |||||||||  ||||||||||||    
T  21565994 ggagatgattgagtatgaa-ccaagtgagtaaacactatgttgaatgaacttgatgcattggtctcactattattaattgtacattttctggaat 21566087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 9186715 - 9186654
Alignment:
Q  33 aaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaatt 94  Q
    |||| ||||||| ||||||||| |||||||||||| ||| |||||| ||||||| |||||||    
T  9186715 aaactaagtgaaaatatactatgttgaatgaacttgatgtattagtatgattattattaatt 9186654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 18788678 - 18788618
Alignment:
Q  50 actatattgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaat 110  Q
    ||||| |||||||||||| ||||||| || ||||||| |||||||||  ||||||||||||    
T  18788678 actatgttgaatgaacttgatgcattggtctgattattattaattgtacattttctggaat 18788618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 18799658 - 18799598
Alignment:
Q  50 actatattgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaat 110  Q
    ||||| |||||||||||| ||||||| || ||||||| |||||||||  ||||||||||||    
T  18799658 actatgttgaatgaacttgatgcattggtctgattattattaattgtacattttctggaat 18799598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 29416290 - 29416398
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    ||||| |||| |||||| |||||||||||||  ||||||  | ||| |||  || ||| ||||||||||||||  ||| |||||| ||||| ||||||||    
T  29416290 tgattgtgatcaattgtatattttctggaattgttggattgactataatgatttgttgatgactgtgatgtatgattacatttaattaaatcatacatgt 29416389  T
Q  180 tgctgaatt 188  Q
    || ||||||    
T  29416390 tgttgaatt 29416398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 80 - 178
Target Start/End: Original strand, 14375131 - 14375230
Alignment:
Q  80 tgattatgattaa-ttgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatg 178  Q
    ||||||||||||| ||||| ||||||||||||  ||| ||  ||||| |||| || |||||||||| |||||||  || ||||||| ||| |||||||||    
T  14375131 tgattatgattaaattgtgcattttctggaatgattgaattgattataatggtttgttgttgactgggatgtatgcttctatttaattaagttatacatg 14375230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 176
Target Start/End: Original strand, 23620992 - 23621023
Alignment:
Q  145 tgatgtatatttatatttaaataaattataca 176  Q
    ||||||||||||||||||||||||||||||||    
T  23620992 tgatgtatatttatatttaaataaattataca 23621023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 24513643 - 24513702
Alignment:
Q  25 tgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgatt 84  Q
    |||||||||||||||| ||| ||||| ||| |||||||||||| ||| |||||| |||||    
T  24513643 tgagtatgaaaccaagcgaaaatatattatgttgaatgaacttgatgtattagtatgatt 24513702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 10582659 - 10582769
Alignment:
Q  80 tgattatgattaattgtgtatttt-ctggaatctttggatc-aattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacat 177  Q
    |||||||||||||||||| ||||| |||||||  ||||||  ||||||  ||   | ||||||||||||||||||  || ||||||| ||||| ||||||    
T  10582659 tgattatgattaattgtgcatttttctggaattgttggattgaattatactgatctgttgttgactgtgatgtatgcttttatttaattaaatcatacat 10582758  T
Q  178 gttgctgaatt 188  Q
    |||| ||||||    
T  10582759 gttgttgaatt 10582769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 187
Target Start/End: Original strand, 14132921 - 14132969
Alignment:
Q  139 tgactgtgatgtatatttatatttaaataaattatacatgttgctgaat 187  Q
    |||||||||||||  ||||||||||||||||| ||||||| || |||||    
T  14132921 tgactgtgatgtacgtttatatttaaataaatcatacatgctgttgaat 14132969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 15 - 278
Target Start/End: Original strand, 9960 - 10223
Alignment:
Q  15 tggagatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaatcttt 114  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||    
T  9960 tggagatgattgagtatgaaaccaagtgaacatatactatgtttaatgaacttgatgcattagtttgattataattaattgtgtattttctggaatcatt 10059  T
Q  115 ggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattattaa 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10060 ggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattattaa 10159  T
Q  215 ttggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10160 ttggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 10223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 244; Significance: 1e-135; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 15 - 278
Target Start/End: Complemental strand, 14421830 - 14421567
Alignment:
Q  15 tggagatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaatcttt 114  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  14421830 tggagatgattgagtatgaaaccaagtgaacatatactatgctgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaatcgtt 14421731  T
Q  115 ggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattattaa 214  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  14421730 ggatcaattatgatagattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattataaa 14421631  T
Q  215 ttggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14421630 ttggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 14421567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 15 - 278
Target Start/End: Complemental strand, 18607341 - 18607078
Alignment:
Q  15 tggagatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaatcttt 114  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  18607341 tggagatgattgagtatgaaaccaagtgaacatatactatgttgaatgaacttgatgcattagtttgattatgattaattgtgtattttctggaatcatt 18607242  T
Q  115 ggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattattaa 214  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  18607241 ggatcaattatgatggattattgttgattgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattattta 18607142  T
Q  215 ttggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18607141 ttggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 18607078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 15 - 278
Target Start/End: Complemental strand, 147546 - 147283
Alignment:
Q  15 tggagatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaatcttt 114  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  147546 tggagatgattgagtatgaaaccaagtgaacatgtactatgttgaatgaacttgatgcattagtttgattatgattaattgtgtattttctggaatcgtt 147447  T
Q  115 ggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattattaa 214  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  147446 ggatcaattatgacggattattgttgactgtgatgtatatttatatttaaataaattatacatgatgctgaattcttttcaaaggttgaagtattattaa 147347  T
Q  215 ttggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  147346 ttggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 147283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 85 - 278
Target Start/End: Complemental strand, 18872355 - 18872162
Alignment:
Q  85 atgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 184  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18872355 atgattaattgtgtattttctggaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 18872256  T
Q  185 aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18872255 aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 18872162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 85 - 278
Target Start/End: Complemental strand, 14566197 - 14566004
Alignment:
Q  85 atgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 184  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14566197 atgattaattgtgtattttctagaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 14566098  T
Q  185 aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 278  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14566097 aattcttttcaaaggttgaagtattattgattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 14566004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 85 - 278
Target Start/End: Complemental strand, 16008573 - 16008380
Alignment:
Q  85 atgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 184  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  16008573 atgattaattgtgtattttctggaatcgttggatcaattatgaaggattattgttgactgtgatgtatatttatatttaaataaattatacatgttcctg 16008474  T
Q  185 aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16008473 aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 16008380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 113 - 275
Target Start/End: Original strand, 16575224 - 16575386
Alignment:
Q  113 ttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattatt 212  Q
    |||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16575224 ttggattaattatgatggattattgttggttgtgatgtatatttatatttaaataaattatacatgttgttgaattcttttcaaaggttgaagtattatt 16575323  T
Q  213 aattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttg 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  16575324 aattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtaggagttgtcgttg 16575386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 113 - 275
Target Start/End: Complemental strand, 16590438 - 16590276
Alignment:
Q  113 ttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattatt 212  Q
    |||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16590438 ttggattaattatgatggattattgttggttgtgatgtatatttatatttaaataaattatacatgttgttgaattcttttcaaaggttgaagtattatt 16590339  T
Q  213 aattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttg 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  16590338 aattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtaggagttgtcgttg 16590276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 123 - 273
Target Start/End: Original strand, 21519037 - 21519189
Alignment:
Q  123 tatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattattaattggatt 221  Q
    ||||||| ||| ||| || |||| |||||||||||||| |||||||||||||||||||| |||| ||| |||||||||||||||||| |||| ||| |||    
T  21519037 tatgatgaattgttgatggctgtcatgtatatttatatgtaaataaattatacatgttgttgaatttcatttcaaaggttgaagtatcattagttgaatt 21519136  T
Q  222 gtcgaggtg-aagtcatatttacatatatgcattgatgagtagtggttgtcgt 273  Q
    || | |||| |||||||||| | |||||||||||| |||||||| ||||||||    
T  21519137 gttggggtgtaagtcatattcatatatatgcattgttgagtagtagttgtcgt 21519189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 123 - 273
Target Start/End: Original strand, 16668327 - 16668480
Alignment:
Q  123 tatgatggattattgttgactg-tgatgtatatttatatttaaataaattatacatgttgctgaatt-cttttcaaaggttgaagtattattaattggat 220  Q
    ||||||| ||||||| || ||| | |||||||||||||| |||||||| ||||||||||| |||||| | |||||||| ||| ||||| |||||||| ||    
T  16668327 tatgatgaattattgatggctgattatgtatatttatatctaaataaagtatacatgttgttgaatttcatttcaaagattggagtatcattaattgaat 16668426  T
Q  221 tgtcgaggtg-aagtcatatttacatatatgcattgatgagtagtggttgtcgt 273  Q
     || |||||| |||||||||| | |||||||||||| |||||||||||||||||    
T  16668427 cgttgaggtgcaagtcatattcatatatatgcattgttgagtagtggttgtcgt 16668480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 123 - 273
Target Start/End: Original strand, 17642697 - 17642850
Alignment:
Q  123 tatgatggattattgttgactg-tgatgtatatttatatttaaataaattatacatgttgctgaatt-cttttcaaaggttgaagtattattaattggat 220  Q
    ||||||| ||||||| || ||| | |||||||||||||| |||||||| ||||||||||| |||||| | |||||||| ||| ||||| |||||||| ||    
T  17642697 tatgatgaattattgatggctgattatgtatatttatatctaaataaagtatacatgttgttgaatttcatttcaaagattggagtatcattaattgaat 17642796  T
Q  221 tgtcgaggtg-aagtcatatttacatatatgcattgatgagtagtggttgtcgt 273  Q
     || |||||| |||||||||| | |||||||||||| |||||||||||||||||    
T  17642797 cgttgaggtgcaagtcatattcatatatatgcattgttgagtagtggttgtcgt 17642850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 181
Target Start/End: Original strand, 16475928 - 16476056
Alignment:
Q  53 atattgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtat 152  Q
    ||||||||||||||  ||| || ||  |||||||||||||||||||||||||||||||  |||||| ||||||||||  || ||| ||||||||||||||    
T  16475928 atattgaatgaactcgatgtatgagcatgattatgattaattgtgtattttctggaattgttggattaattatgatgatttgttgatgactgtgatgtat 16476027  T
Q  153 atttatatttaaataaattatacatgttg 181  Q
     ||||||| ||| ||||| ||||||||||    
T  16476028 gtttatatctaattaaatcatacatgttg 16476056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 13678702 - 13678609
Alignment:
Q  18 agatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatga-ttaattgtgtattttctggaat 110  Q
    |||||||||||||| | |||||||||||||||||||| |||||||||||| ||||||| |||||||||| | ||||||||  ||||||||||||    
T  13678702 agatgattgagtatcataccaagtgaacatatactatgttgaatgaacttgatgcattggtttgattattatttaattgtacattttctggaat 13678609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 142 - 273
Target Start/End: Complemental strand, 14038950 - 14038816
Alignment:
Q  142 ctgtgatgtatatttatatttaaa-taaattatacatgttgctgaatt-cttttcaaaggttgaagtattattaattggattgtcgaggtg-aagtcata 238  Q
    |||| ||||||||||||| ||||| ||||||||||| |||| |||||| | |||||||||||||||||| | |||||| ||||| | |||| ||||||||    
T  14038950 ctgttatgtatatttatacttaaaataaattatacacgttgttgaatttcatttcaaaggttgaagtatcactaattgaattgttggggtgtaagtcata 14038851  T
Q  239 tttacatatatgcattgatgagtagtggttgtcgt 273  Q
    || | | |||||||||| |||||||  ||||||||    
T  14038850 ttcatagatatgcattgttgagtagcagttgtcgt 14038816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 142 - 273
Target Start/End: Complemental strand, 14348980 - 14348846
Alignment:
Q  142 ctgtgatgtatatttatatttaaa-taaattatacatgttgctgaatt-cttttcaaaggttgaagtattattaattggattgtcgaggtg-aagtcata 238  Q
    |||| ||||||||||||| ||||| ||||||||||| |||| |||||| | |||||||||||||||||| | |||||| ||||| | |||| ||||||||    
T  14348980 ctgttatgtatatttatacttaaaataaattatacacgttgttgaatttcatttcaaaggttgaagtatcactaattgaattgttggggtgtaagtcata 14348881  T
Q  239 tttacatatatgcattgatgagtagtggttgtcgt 273  Q
    || | | |||||||||| |||||||  ||||||||    
T  14348880 ttcatagatatgcattgttgagtagcagttgtcgt 14348846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 181
Target Start/End: Complemental strand, 12694943 - 12694842
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    |||||||||| ||||||||||||||||||||  |||||| || |||||||  || ||| ||||||| |||||| |||| |||||| ||||| ||||||||    
T  12694943 tgattatgatcaattgtgtattttctggaattgttggattaactatgatgatttgttgatgactgtaatgtatgtttacatttaattaaatcatacatgt 12694844  T
Q  180 tg 181  Q
    ||    
T  12694843 tg 12694842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 181
Target Start/End: Complemental strand, 15142556 - 15142455
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    |||||||||| | ||||||||||||||||||  |||||| || |||||||  || ||| |||||||||||||| |||| |||||| ||||| ||||||||    
T  15142556 tgattatgatcatttgtgtattttctggaattgttggattaactatgatgatttgttgatgactgtgatgtatgtttacatttaattaaatcatacatgt 15142457  T
Q  180 tg 181  Q
    ||    
T  15142456 tg 15142455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 181
Target Start/End: Original strand, 16073764 - 16073889
Alignment:
Q  56 ttgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatt 155  Q
    |||||||||||| ||| || ||  |||||||||||| ||||||||||| ||||||  |||||| || |||||||  || ||| |||||||||||||| ||    
T  16073764 ttgaatgaacttgatgtatgagcatgattatgattatttgtgtattttttggaattgttggattaactatgatgatttgttgatgactgtgatgtatgtt 16073863  T
Q  156 tatatttaaataaattatacatgttg 181  Q
    || |||||| ||||  ||||||||||    
T  16073864 tacatttaattaaaccatacatgttg 16073889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 231 - 278
Target Start/End: Original strand, 10897018 - 10897065
Alignment:
Q  231 aagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 278  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10897018 aagtcatatttacatatatgcattgatgagtggtggttgtcgttgatg 10897065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 15690237 - 15690165
Alignment:
Q  142 ctgtgatgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattatta 213  Q
    |||| |||||||||||||||||||||||||||||| |||| |||| ||| ||||||||||||| |||| ||||    
T  15690237 ctgttatgtatatttatatttaaataaattatacaagttgttgaatttcatttcaaaggttgatgtatcatta 15690165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 15697830 - 15697758
Alignment:
Q  142 ctgtgatgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattatta 213  Q
    |||| |||||||||||||||||||||||||||||| |||| |||| ||| ||||||||||||| |||| ||||    
T  15697830 ctgttatgtatatttatatttaaataaattatacaagttgttgaatttcatttcaaaggttgatgtatcatta 15697758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 45185802 - 45185695
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    ||||||||||| |||||||||||||| ||||  ||||||  |||||||||   | ||| |||||||||||||| |||| | |||| ||||| ||||||||    
T  45185802 tgattatgattgattgtgtattttcttgaattgttggattgattatgatgatctgttgatgactgtgatgtatgtttaca-ttaattaaatcatacatgt 45185704  T
Q  180 tgctgaatt 188  Q
    || ||||||    
T  45185703 tgttgaatt 45185695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 11857521 - 11857623
Alignment:
Q  80 tgattatgattaattgtgtatttt-ctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatg 178  Q
    |||||||||||||||||| ||||| |||||||  ||||||  ||||| |||   | ||| |||||||||||||| |||||| |||||||||| || ||||    
T  11857521 tgattatgattaattgtgcatttttctggaattgttggattgattataatgatctgttgatgactgtgatgtatgtttataattaaataaatcattcatg 11857620  T
Q  179 ttg 181  Q
    |||    
T  11857621 ttg 11857623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 110
Target Start/End: Complemental strand, 16676563 - 16676470
Alignment:
Q  16 ggagatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaat 110  Q
    |||||||||||||| |||| ||||||||  | | ||||| ||||||| |||| ||||||| || ||||||| |||||||||  ||||||||||||    
T  16676563 ggagatgattgagtgtgaa-ccaagtgagtaaacactatgttgaatggacttgatgcattggtctgattattattaattgtacattttctggaat 16676470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 110
Target Start/End: Complemental strand, 17650799 - 17650706
Alignment:
Q  16 ggagatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaat 110  Q
    |||||||||||||| |||| ||||||||  | | ||||| ||||||| |||| ||||||| || ||||||| |||||||||  ||||||||||||    
T  17650799 ggagatgattgagtgtgaa-ccaagtgagtaaacactatgttgaatggacttgatgcattggtctgattattattaattgtacattttctggaat 17650706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 21231808 - 21231877
Alignment:
Q  25 tgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaatt 94  Q
    |||||||||||||||||||| ||||| ||| | |||||||||| ||| |||||| ||||| | |||||||    
T  21231808 tgagtatgaaaccaagtgaaaatatattatgtagaatgaacttgatgtattagtatgattgttattaatt 21231877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 275
Target Start/End: Original strand, 41782989 - 41783033
Alignment:
Q  231 aagtcatatttacatatatgcattgatgagtagtggttgtcgttg 275  Q
    |||||||||||| |||||||||||||||| |||||| ||||||||    
T  41782989 aagtcatatttatatatatgcattgatgaatagtggctgtcgttg 41783033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 14169408 - 14169461
Alignment:
Q  135 ttgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 188  Q
    ||||||||||||||||||  || ||||||| ||||| |||||||||| ||||||    
T  14169408 ttgttgactgtgatgtatgcttttatttaattaaatcatacatgttgttgaatt 14169461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 14178882 - 14178935
Alignment:
Q  135 ttgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 188  Q
    ||||||||||||||||||  || ||||||| ||||| |||||||||| ||||||    
T  14178882 ttgttgactgtgatgtatgcttttatttaattaaatcatacatgttgttgaatt 14178935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 244; Significance: 1e-135; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 15 - 278
Target Start/End: Original strand, 20438234 - 20438496
Alignment:
Q  15 tggagatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaatcttt 114  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  20438234 tggagatgattgagtatgaaaccaagtgaacatatactatgttgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaatcgtt 20438333  T
Q  115 ggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattattaa 214  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20438334 ggatcaattatgatggattattgttgactgtgatgtata-ttatatttaaataaattatacatgttgttgaattcttttcaaaggttgaagtattattaa 20438432  T
Q  215 ttggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20438433 ttggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 20438496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 85 - 278
Target Start/End: Complemental strand, 16372026 - 16371833
Alignment:
Q  85 atgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 184  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  16372026 atgattaattgtgtattttctggaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgttg 16371927  T
Q  185 aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 278  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16371926 aattcttttcaaaggttgaagtattattaattgaattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 16371833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 83 - 278
Target Start/End: Complemental strand, 29535308 - 29535113
Alignment:
Q  83 ttatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgc 182  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  29535308 ttatgattaattgtgtattttctggaatcgttggattaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacgtgttgc 29535209  T
Q  183 tgaattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 278  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29535208 tgaattcttttcaaatgttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 29535113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 83 - 278
Target Start/End: Complemental strand, 13227120 - 13226925
Alignment:
Q  83 ttatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgc 182  Q
    |||||| |||||||||||||| ||||||| |||||| |||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13227120 ttatgactaattgtgtattttttggaatcgttggattaattagtatgaattattgttgactgtgatgtatatttatatttaaataaattatacatgttgc 13227021  T
Q  183 tgaattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13227020 tgaattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 13226925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 80 - 275
Target Start/End: Original strand, 21986724 - 21986920
Alignment:
Q  80 tgattatgattaattgtgtatttt-ctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatg 178  Q
    |||||||||||||||||||||||| |||||||  |||||| |||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||    
T  21986724 tgattatgattaattgtgtatttttctggaattgttggattaattatgatggattattgctggctgtaatgtatatttatatttaaataaattatacatg 21986823  T
Q  179 ttgctgaattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttg 275  Q
    ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21986824 ttgttaaattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagttgttgtcgttg 21986920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 80 - 275
Target Start/End: Original strand, 21745422 - 21745620
Alignment:
Q  80 tgattatgattaattgtgtattttct---ggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattataca 176  Q
    |||||||||||||||||||||||| |   |||||  |||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  21745422 tgattatgattaattgtgtattttttcttggaattgttggattaataatgatggattattgttggctgtgatgtatatttatatttaaatgaattataca 21745521  T
Q  177 tgttgctgaattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttg 275  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21745522 tgttgttgaattcttttcaaaggttgaagtattattaattggattgttgaggtgaagtcatatttacatatatgcattgattagtagtggttgtcgttg 21745620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 80 - 275
Target Start/End: Original strand, 21734231 - 21734428
Alignment:
Q  80 tgattatgattaattgtgtatttt-ctggaatctttggatcaattatgatggattattg-ttgactgtgatgtatatttatatttaaataaattatacat 177  Q
    |||||| ||||||||| || |||| ||||||| ||||||| |||||| ||||||||||| |||  ||||||||||||||||||||||||||||||||| |    
T  21734231 tgattaagattaattgcgtgtttttctggaatttttggattaattattatggattattgattggttgtgatgtatatttatatttaaataaattatactt 21734330  T
Q  178 gttgctgaattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttg 275  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  21734331 gttgttgaattcttttcaaaggttgaggtattattaattggattgtcgaggtgaagtcatatttacatatatgcatttatgagtagttgttgtcgttg 21734428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 11157381 - 11157289
Alignment:
Q  18 agatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaat 110  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| | |||||||||| |||||||||  ||||||||||||    
T  11157381 agatgattgagtatgaaaccaagtgaacatatactatgttgaatgaacttgatgcactggtttgattattattaattgtacattttctggaat 11157289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 147 - 273
Target Start/End: Complemental strand, 24475681 - 24475554
Alignment:
Q  147 atgtatatttatatttaaataaattatacatgttgctgaatt-cttttcaaaggttgaagtattattaattggattgtcgaggtg-aagtcatatttaca 244  Q
    ||||||||||||||| ||||||||||||||||||| |||||| | |||||||| || |||||| |||||||| ||| | |||||| |||||||||| |||    
T  24475681 atgtatatttatatt-aaataaattatacatgttgttgaatttcatttcaaagattaaagtatcattaattgaattcttgaggtgtaagtcatattcaca 24475583  T
Q  245 tatatgcattgatgagtagtggttgtcgt 273  Q
    ||||||||||| |||||||||||||||||    
T  24475582 tatatgcattgttgagtagtggttgtcgt 24475554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 123 - 208
Target Start/End: Original strand, 25092151 - 25092237
Alignment:
Q  123 tatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt-cttttcaaaggttgaagtat 208  Q
    ||||||| ||| ||| || ||||  |||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||    
T  25092151 tatgatgaattgttgatggctgttttgtatatttatatttaaataaattatacatgttgttgaattacatttcaaaggttgaagtat 25092237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 181
Target Start/End: Complemental strand, 21698476 - 21698351
Alignment:
Q  56 ttgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatt 155  Q
    |||||||||||| ||| || ||| |||||||||| || |||| ||||||| | ||  ||||||  |||||||||  || ||||||||||||||||||  |    
T  21698476 ttgaatgaacttgatgtatgagtatgattatgatcaactgtgaattttctaggattattggattgattatgatgatttgttgttgactgtgatgtatgct 21698377  T
Q  156 tatatttaaataaattatacatgttg 181  Q
    ||||||||| ||||| ||||||||||    
T  21698376 tatatttaattaaatcatacatgttg 21698351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 60 - 181
Target Start/End: Complemental strand, 23631331 - 23631210
Alignment:
Q  60 atgaactttatgcattagtttgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttata 159  Q
    |||||||| ||| || || ||||||||||||||||||| |||||   ||||  ||||||  |||||||||  |||||||||||||||||||||  || ||    
T  23631331 atgaacttgatgtatgagcttgattatgattaattgtgcatttttctgaattgttggattgattatgatgatttattgttgactgtgatgtatgctttta 23631232  T
Q  160 tttaaataaattatacatgttg 181  Q
    ||||| ||||| ||||||||||    
T  23631231 tttaattaaatcatacatgttg 23631210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 18711979 - 18711910
Alignment:
Q  25 tgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaatt 94  Q
    |||||||||||||||||||| ||||||||| |||||||||||| ||| |||||| ||||| | |||||||    
T  18711979 tgagtatgaaaccaagtgaaaatatactatgttgaatgaacttgatgtattagtatgattgttattaatt 18711910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 57 - 181
Target Start/End: Original strand, 20108307 - 20108432
Alignment:
Q  57 tgaatgaactttatgcattagtttgattatgattaattgtgta-ttttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatt 155  Q
    ||||||||||||||| || ||  ||||| |||||||||||||| |||||||||||  |||||| ||||||||||   |  || |||||||||| ||| ||    
T  20108307 tgaatgaactttatgtatgagcatgattgtgattaattgtgtatttttctggaattgttggattaattatgatgatgtgctgatgactgtgatatatgtt 20108406  T
Q  156 tatatttaaataaattatacatgttg 181  Q
    ||||| ||| ||||| ||||||||||    
T  20108407 tatatctaattaaatcatacatgttg 20108432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 181
Target Start/End: Complemental strand, 41312525 - 41312401
Alignment:
Q  57 tgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatattt 156  Q
    ||||||||||| ||| || ||  ||||||||||  | ||||||| |||||||||  ||| || ||||||||||  || | | |||||||||||||| |||    
T  41312525 tgaatgaacttgatgtatgagcatgattatgatggactgtgtatcttctggaattgttgcattaattatgatgacttgtggatgactgtgatgtatgttt 41312426  T
Q  157 atatttaaataaattatacatgttg 181  Q
    |||||||| ||||| ||||||||||    
T  41312425 atatttaattaaatcatacatgttg 41312401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 11140823 - 11140932
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtat-atttatatttaaataaattatacatg 178  Q
    |||||||||||| ||||| ||||||||||||  ||| ||  |||||||||   | ||||||||||||||||||  ||| ||||||| ||||| |||||||    
T  11140823 tgattatgattagttgtgcattttctggaattattgaattgattatgatgatctgttgttgactgtgatgtatgctttttatttaattaaatcatacatg 11140922  T
Q  179 ttgctgaatt 188  Q
    ||| ||||||    
T  11140923 ttgttgaatt 11140932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 30491260 - 30491361
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    |||||||||| | ||||| ||||||||||||  ||||||  |||||||||  || ||| ||| |||||||||| |||| |||||| ||||| ||||||||    
T  30491260 tgattatgatcatttgtgaattttctggaattgttggattgattatgatgatttgttgatgattgtgatgtatgtttacatttaattaaatcatacatgt 30491359  T
Q  180 tg 181  Q
    ||    
T  30491360 tg 30491361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 181
Target Start/End: Original strand, 20086279 - 20086405
Alignment:
Q  56 ttgaatgaactttatgcattagtttgattatgattaattgtgta-ttttctggaatctttggatcaattatgatggattattgttgactgtgatgtatat 154  Q
    |||||||||||| ||| || ||  |||||| ||| ||||||||| |||||| ||||  ||| || ||||||||||  || ||| |||| ||||||||| |    
T  20086279 ttgaatgaacttgatgtatgagcatgattaagatcaattgtgtatttttctagaattgttgcattaattatgatgatttgttgatgacagtgatgtatgt 20086378  T
Q  155 ttatatttaaataaattatacatgttg 181  Q
    |||||| ||| ||||| ||||||||||    
T  20086379 ttatatctaattaaatcatacatgttg 20086405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 23195286 - 23195395
Alignment:
Q  80 tgattatgattaattgtgt-attttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatg 178  Q
    ||||||| ||||||||||| ||||||||||    |||||| ||||||||||  |  ||| ||||||||||||||  |||||| ||| ||||| |||||||    
T  23195286 tgattataattaattgtgttattttctggagctattggattaattatgatgattggttgatgactgtgatgtatgcttatatctaattaaatcatacatg 23195385  T
Q  179 ttgctgaatt 188  Q
    ||| ||||||    
T  23195386 ttgttgaatt 23195395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 184
Target Start/End: Complemental strand, 5381007 - 5380879
Alignment:
Q  57 tgaatgaactttatgcattagtttgattatgattaattgtgt-attttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatt 155  Q
    ||||||||||| ||| |  || |||||||| ||| ||||||| ||||||||||    ||| || ||||||||||  || ||| ||||||||||||||  |    
T  5381007 tgaatgaacttgatgtaggagcttgattataatttattgtgttattttctggagctattgaattaattatgatgatttgttgatgactgtgatgtatgct 5380908  T
Q  156 tatatttaaataaattatacatgttgctg 184  Q
    ||||| ||||||||| || ||||||||||    
T  5380907 tatatctaaataaatcatgcatgttgctg 5380879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 176
Target Start/End: Complemental strand, 20901418 - 20901387
Alignment:
Q  145 tgatgtatatttatatttaaataaattataca 176  Q
    ||||||||||||||||||||||||||||||||    
T  20901418 tgatgtatatttatatttaaataaattataca 20901387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 15316382 - 15316435
Alignment:
Q  135 ttgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 188  Q
    ||||||||||||||||||  || ||||||| ||||| |||||||||| ||||||    
T  15316382 ttgttgactgtgatgtatgcttttatttaattaaatcatacatgttgttgaatt 15316435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 240; Significance: 1e-133; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 15 - 278
Target Start/End: Complemental strand, 18212613 - 18212350
Alignment:
Q  15 tggagatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaatcttt 114  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||    
T  18212613 tggagatgattgagtatgaaaccaagtgaacatatactatgttgaatgaacttgatgcattagtttgattatgattaattgtgtattttcttgaatcatt 18212514  T
Q  115 ggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattattaa 214  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18212513 ggatcaattataatggattattgttgactgtgatgtatatttatatttaaataaattatacatcttgctgaattcttttcaaaggttgaagtattattaa 18212414  T
Q  215 ttggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18212413 ttggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 18212350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 83 - 278
Target Start/End: Complemental strand, 30147176 - 30146981
Alignment:
Q  83 ttatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgc 182  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30147176 ttatgattaattgtgtattttctggaatcgttggattaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgc 30147077  T
Q  183 tgaattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30147076 tgaattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 30146981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 123 - 273
Target Start/End: Complemental strand, 15075677 - 15075526
Alignment:
Q  123 tatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattct-tttcaaaggttgaagtattattaattggatt 221  Q
    ||||||| ||||||| ||  ||| ||| ||||||||||| ||||||||||||| ||||| |||||| | |||||||| ||||||||| | |||||| |||    
T  15075677 tatgatgaattattgatggttgttatgcatatttatatt-aaataaattatacttgttgttgaattttatttcaaagattgaagtatcactaattgaatt 15075579  T
Q  222 gtcgaggtg-aagtcatatttacatatatgcattgatgagtagtggttgtcgt 273  Q
    || |||||| ||||| |||| |||||||||||||| |||||||||||| ||||    
T  15075578 gttgaggtgtaagtcctattcacatatatgcattgttgagtagtggttctcgt 15075526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 181
Target Start/End: Complemental strand, 15546954 - 15546854
Alignment:
Q  81 gattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgtt 180  Q
    ||||||||| |||||||||||||||||| |  |||||| || ||||||| ||| ||| |||||||||||||| ||||||||||| ||||| |||||||||    
T  15546954 gattatgatcaattgtgtattttctggatttgttggattaactatgatgaattgttgatgactgtgatgtatgtttatatttaattaaatcatacatgtt 15546855  T
Q  181 g 181  Q
    |    
T  15546854 g 15546854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 16228941 - 16229049
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    |||||||||||| ||||| ||||||| ||||  ||||||  |||||||||   | ||||||||||||||||||| || ||||||| ||||| ||||||||    
T  16228941 tgattatgattagttgtgcattttcttgaattattggattgattatgatgatctgttgttgactgtgatgtatacttttatttaattaaatcatacatgt 16229040  T
Q  180 tgctgaatt 188  Q
    || ||||||    
T  16229041 tgttgaatt 16229049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 181
Target Start/End: Complemental strand, 18271617 - 18271519
Alignment:
Q  84 tatgattaattgtgtatttt-ctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 181  Q
    |||||||||||||||||||| || | |   |||||| | |||||||| ||| ||| |||||||||||||| ||||||||||||||||| ||||||||||    
T  18271617 tatgattaattgtgtatttttctaggactgttggattacttatgatgaattgttgatgactgtgatgtatgtttatatttaaataaatcatacatgttg 18271519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 18261622 - 18261554
Alignment:
Q  113 ttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 181  Q
    |||||| | |||||||| ||| ||| |||||||||||||| ||||||||||||||||| ||||||||||    
T  18261622 ttggattacttatgatgaattgttgatgactgtgatgtatgtttatatttaaataaatcatacatgttg 18261554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 53905136 - 53905238
Alignment:
Q  80 tgattatgattaattgtgtatttt-ctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatg 178  Q
    |||||||||||||||||| ||||| |||||||  ||||||  ||||| |||   | ||| |||||||||||||| |||||| |||||||||| |||||||    
T  53905136 tgattatgattaattgtgcatttttctggaattgttggattgattataatgatatgttgatgactgtgatgtatgtttataattaaataaatcatacatg 53905235  T
Q  179 ttg 181  Q
    |||    
T  53905236 ttg 53905238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 181
Target Start/End: Original strand, 15004864 - 15004965
Alignment:
Q  81 gattatgattaattgtgtatttt-ctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    ||||||||| ||||||||||||| |||| ||  |||||| | ||||||||  || ||| ||| |||||||||| ||||||||||| ||||| ||||||||    
T  15004864 gattatgatgaattgtgtatttttctgggattgttggattacttatgatgatttgttgatgattgtgatgtatgtttatatttaactaaatcatacatgt 15004963  T
Q  180 tg 181  Q
    ||    
T  15004964 tg 15004965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 178
Target Start/End: Complemental strand, 15407316 - 15407167
Alignment:
Q  29 tatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaatctttggatcaattatgat 128  Q
    |||||||||||||||| |||||  || ||||||||| || ||| || ||  |||||||||||| ||||| ||||||||||||  ||| ||   ||||  |    
T  15407316 tatgaaaccaagtgaaaatatatgatgttgaatgaatttaatgtatgagcatgattatgattagttgtgcattttctggaatgattgaatgggttatagt 15407217  T
Q  129 ggattattgttgactgtgatgtatatttatatttaaataaattatacatg 178  Q
    || || |||||||||| |||||||  || ||||||| ||| |||||||||    
T  15407216 ggtttgttgttgactgggatgtatgcttctatttaattaagttatacatg 15407167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 4830912 - 4831020
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    ||||| |||| |||||| |||||||||||||  ||||||  | ||| |||  || ||| |||||||||||||| |||| |||||| ||||| ||||||||    
T  4830912 tgattgtgatcaattgtatattttctggaattgttggattgactattatgatttgttgatgactgtgatgtatgtttacatttaattaaatcatacatgt 4831011  T
Q  180 tgctgaatt 188  Q
    || ||||||    
T  4831012 tgttgaatt 4831020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 4834207 - 4834315
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    ||||| |||| |||||| |||||||||||||  ||||||  | ||| |||  || ||| |||||||||||||| |||| |||||| ||||| ||||||||    
T  4834207 tgattgtgatcaattgtatattttctggaattgttggattgactattatgatttgttgatgactgtgatgtatgtttacatttaattaaatcatacatgt 4834306  T
Q  180 tgctgaatt 188  Q
    || ||||||    
T  4834307 tgttgaatt 4834315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 181
Target Start/End: Complemental strand, 30238107 - 30238003
Alignment:
Q  80 tgattatgattaattgtgtatttt---ctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattataca 176  Q
    ||||||||||||||||||||||||   |||| ||  |||||| | ||||||||  || ||| ||  |||||||||| ||||||||||| ||||| |||||    
T  30238107 tgattatgattaattgtgtatttttttctgggattgttggattacttatgatgatttgttgatggttgtgatgtatgtttatatttaattaaatcataca 30238008  T
Q  177 tgttg 181  Q
    |||||    
T  30238007 tgttg 30238003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 208
Target Start/End: Complemental strand, 15318283 - 15318222
Alignment:
Q  148 tgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtat 208  Q
    |||||||||||||||||||||| |||||| |||| |||| ||| ||||||||||||| ||||    
T  15318283 tgtatatttatatttaaataaactatacaagttgttgaatttcatttcaaaggttgatgtat 15318222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 176
Target Start/End: Original strand, 9388195 - 9388226
Alignment:
Q  145 tgatgtatatttatatttaaataaattataca 176  Q
    ||||||||||||||||||||||||||||||||    
T  9388195 tgatgtatatttatatttaaataaattataca 9388226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 176
Target Start/End: Complemental strand, 13878065 - 13878034
Alignment:
Q  145 tgatgtatatttatatttaaataaattataca 176  Q
    ||||||||||||||||||||||||||||||||    
T  13878065 tgatgtatatttatatttaaataaattataca 13878034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 14485898 - 14485835
Alignment:
Q  47 tatactatattgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaat 110  Q
    |||||||| ||||||||||||  ||||||||  ||||||| | |||||||| ||||||||||||    
T  14485898 tatactatgttgaatgaacttgttgcattagcatgattattaataattgtgcattttctggaat 14485835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 188
Target Start/End: Complemental strand, 14821713 - 14821603
Alignment:
Q  79 ttgattatgattaattgtgt-attttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacat 177  Q
    |||||||| ||||||||| | ||||||||||    ||||| |||||||||||  ||  || |||||||||||||| ||||||| ||| ||||| |||| |    
T  14821713 ttgattataattaattgtattattttctggagctgttggaccaattatgatgatttgctgatgactgtgatgtatgtttatatctaattaaatcatacgt 14821614  T
Q  178 gttgctgaatt 188  Q
    |||| ||||||    
T  14821613 gttgttgaatt 14821603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 18166106 - 18166216
Alignment:
Q  80 tgattatgattaattgtgtatttt-ctggaatctttggatc-aattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacat 177  Q
    |||||||||||||||||| ||||| |||||||  ||||||  ||||||  ||   | ||||||||||||||||||  || ||||||| ||||| ||||||    
T  18166106 tgattatgattaattgtgcatttttctggaattgttggattgaattatactgatctgttgttgactgtgatgtatgcttttatttaattaaatcatacat 18166205  T
Q  178 gttgctgaatt 188  Q
    |||| ||||||    
T  18166206 gttgttgaatt 18166216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 275
Target Start/End: Original strand, 27849384 - 27849428
Alignment:
Q  231 aagtcatatttacatatatgcattgatgagtagtggttgtcgttg 275  Q
    ||||| |||||| |||||||||||||||| ||||| |||||||||    
T  27849384 aagtcttatttatatatatgcattgatgaatagtgtttgtcgttg 27849428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 240; Significance: 1e-133; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 15 - 278
Target Start/End: Complemental strand, 9533325 - 9533062
Alignment:
Q  15 tggagatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaatcttt 114  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  9533325 tggagatgattgagtatgaaactaagtgaacatatactatgttgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaatcgtt 9533226  T
Q  115 ggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattattaa 214  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  9533225 ggatcaattatgatggattgttgttgactgtgatgtatatttatatttaaataaattatacatgttgctaaattctttttaaaggttgaagtattattaa 9533126  T
Q  215 ttggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9533125 ttggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 9533062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 85 - 278
Target Start/End: Original strand, 23371564 - 23371757
Alignment:
Q  85 atgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 184  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23371564 atgattaattgtgtattttctggaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 23371663  T
Q  185 aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23371664 aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 23371757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 85 - 278
Target Start/End: Original strand, 14763818 - 14764011
Alignment:
Q  85 atgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 184  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14763818 atgattaattgtgtattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 14763917  T
Q  185 aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14763918 aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 14764011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 85 - 278
Target Start/End: Complemental strand, 51300590 - 51300397
Alignment:
Q  85 atgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 184  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51300590 atgattaattgtgtattttctggaatcgttggatcaattatgatgaattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 51300491  T
Q  185 aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51300490 aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 51300397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 80 - 275
Target Start/End: Original strand, 24284252 - 24284448
Alignment:
Q  80 tgattatgattaattgtgtatttt-ctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatg 178  Q
    |||||||||||||||| ||||||| |||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24284252 tgattatgattaattgagtatttttctggaattgttggattaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatg 24284351  T
Q  179 ttgctgaattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttg 275  Q
    ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24284352 ttgttgaattcttttcaaaggttggagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttg 24284448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 80 - 275
Target Start/End: Complemental strand, 42109539 - 42109343
Alignment:
Q  80 tgattatgattaattgtgtatttt-ctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatg 178  Q
    |||||||||||||||||||||||| |||||||  |||||| ||||||||||  |||||| || |||| ||||||||||||||||||||||||||||||||    
T  42109539 tgattatgattaattgtgtatttttctggaattgttggattaattatgatgagttattgctggctgtaatgtatatttatatttaaataaattatacatg 42109440  T
Q  179 ttgctgaattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttg 275  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  42109439 ttgttgaattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcatttaagagtagtggttgtcgttg 42109343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 80 - 273
Target Start/End: Original strand, 15011743 - 15011939
Alignment:
Q  80 tgattatgattaattgtgt-attttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatg 178  Q
    ||||||| ||||||||||| ||||||||||    ||| || |||||||||| ||  ||| || |||| ||||||||||||| ||||||||||||||||||    
T  15011743 tgattataattaattgtgttattttctggagctgttgaattaattatgatgaatcgttgatggctgttatgtatatttatacttaaataaattatacatg 15011842  T
Q  179 ttgctgaa-ttcttttcaaaggttgaagtattattaattggattgtcgaggtg-aagtcatatttacatatatgcattgatgagtagtggttgtcgt 273  Q
    ||| |||| ||| |||||||| ||||||||| |||||||| ||||| |||||| |||||||||| | |||||||||||| |||||||||||||||||    
T  15011843 ttgttgaatttcatttcaaagattgaagtatcattaattgaattgttgaggtgtaagtcatattcatatatatgcattgttgagtagtggttgtcgt 15011939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 147 - 273
Target Start/End: Original strand, 1989071 - 1989198
Alignment:
Q  147 atgtatatttatatttaaataaattatacatgttgctgaattct-tttcaaaggttgaagtattattaattggattgtcgaggtg-aagtcatatttaca 244  Q
    ||||||||||||||| || ||||||||  |||||| |||||||  |||||||| ||||||||| |||||||| ||||| |||||| |||||||||| |||    
T  1989071 atgtatatttatatt-aactaaattatgtatgttgttgaattccatttcaaagattgaagtatcattaattgaattgttgaggtgtaagtcatattcaca 1989169  T
Q  245 tatatgcattgatgagtagtggttgtcgt 273  Q
    ||||||||||| ||||||||| |||||||    
T  1989170 tatatgcattgttgagtagtgattgtcgt 1989198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 16823628 - 16823729
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    |||||||||| ||||||| ||||||||||||  |||||| ||||||| |   |||||| |||||||||||||| |||| |||||| ||||| ||||||||    
T  16823628 tgattatgatcaattgtgcattttctggaattgttggattaattatgctcacttattgatgactgtgatgtatgtttacatttaattaaatcatacatgt 16823727  T
Q  180 tg 181  Q
    ||    
T  16823728 tg 16823729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 108
Target Start/End: Complemental strand, 18914355 - 18914262
Alignment:
Q  15 tggagatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgtgtattttctgga 108  Q
    ||||||||||||||||||||| |||||||| ||||| ||| ||||||||| || ||| || ||  | ||||| ||||||||||||| |||||||    
T  18914355 tggagatgattgagtatgaaatcaagtgaatatatattatgttgaatgaaattgatgtatgagcataattataattaattgtgtatgttctgga 18914262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 15954776 - 15954882
Alignment:
Q  82 attatgattaattgtgtatttt-ctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgtt 180  Q
    |||||||||||||||||||||| ||||| | || |||| | ||||||||  || ||| |||||||||||||| ||||||||| | ||||| |||||||||    
T  15954776 attatgattaattgtgtatttttctggattgtt-ggattacttatgatgatttgttgatgactgtgatgtatgtttatatttgattaaatcatacatgtt 15954874  T
Q  181 gctgaatt 188  Q
    | ||||||    
T  15954875 gttgaatt 15954882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 55499929 - 55500022
Alignment:
Q  16 ggagatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaat 110  Q
    ||||||||||||||||||| ||||||||  | | ||||| |||||||||||| ||||||| || ||| ||| |||||||||  ||||||||||||    
T  55499929 ggagatgattgagtatgaa-ccaagtgagtaaacactatgttgaatgaacttgatgcattggtctgactattattaattgtacattttctggaat 55500022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 57 - 188
Target Start/End: Complemental strand, 35985063 - 35984931
Alignment:
Q  57 tgaatgaactttatgcattagtttgattatgattaattgtgt-attttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatt 155  Q
    ||||||||||| |||||  || |||||||| ||||||||| | ||||||||||    ||| || ||||||||||  || ||| ||||||||||||||  |    
T  35985063 tgaatgaacttgatgcagaagcttgattataattaattgtattattttctggagctattgaattaattatgatgatttgttgatgactgtgatgtatgct 35984964  T
Q  156 tatatttaaataaattatacatgttgctgaatt 188  Q
    ||||| ||||||||| |||||||| | ||||||    
T  35984963 tatatctaaataaatcatacatgtcgttgaatt 35984931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 15934781 - 15934887
Alignment:
Q  82 attatgattaattgtgtatttt-ctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgtt 180  Q
    |||||||||||||||||||||| || || | || |||| | ||||||||  || ||| |||||||||||||| ||||||||| | ||||| |||||||||    
T  15934781 attatgattaattgtgtatttttcttgattgtt-ggattacttatgatgattttttgatgactgtgatgtatgtttatatttgattaaatcatacatgtt 15934879  T
Q  181 gctgaatt 188  Q
    | ||||||    
T  15934880 gttgaatt 15934887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 12153154 - 12153108
Alignment:
Q  135 ttgttgactgtgatgtatatttatatttaaataaattatacatgttg 181  Q
    |||||||||||||||||| |||||||||||||| || ||||||||||    
T  12153154 ttgttgactgtgatgtatgtttatatttaaatagatcatacatgttg 12153108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 12855742 - 12855803
Alignment:
Q  148 tgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtat 208  Q
    |||||||||||||||||||||| |||||| |||| |||| ||| ||||||||||||| ||||    
T  12855742 tgtatatttatatttaaataaactatacaagttgttgaatttcatttcaaaggttgatgtat 12855803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 181
Target Start/End: Original strand, 13036783 - 13036908
Alignment:
Q  57 tgaatgaactttatgcattagtttgattatgattaattgtgta-ttttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatt 155  Q
    ||||||||||| ||| || ||  |||||||||| ||||||||| ||||||| |||  |||||| || |||||||  || ||| ||||| | |||||| ||    
T  13036783 tgaatgaacttcatgtatgagcatgattatgatcaattgtgtatttttctgaaattgttggattaactatgatgatttgttgatgactataatgtatgtt 13036882  T
Q  156 tatatttaaataaattatacatgttg 181  Q
    ||||||||| |||||  |||||||||    
T  13036883 tatatttaattaaatcgtacatgttg 13036908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 187
Target Start/End: Complemental strand, 13692278 - 13692173
Alignment:
Q  83 ttatgattaattgtgtat-tttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 181  Q
    |||||||||||||||||| |||||||| | || |  | ||||||||||   | ||||||||||||||||||  || ||||||| ||||| ||||||||||    
T  13692278 ttatgattaattgtgtatctttctggattgttggattgaattatgatgatatgttgttgactgtgatgtatgcttttatttaattaaatcatacatgttg 13692179  T
Q  182 ctgaat 187  Q
     |||||    
T  13692178 ttgaat 13692173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 17243447 - 17243506
Alignment:
Q  25 tgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgatt 84  Q
    |||||||||||||||||||| ||||| ||| |||||||||||| ||| ||| || |||||    
T  17243447 tgagtatgaaaccaagtgaaaatatattatgttgaatgaacttgatgtattggtatgatt 17243506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 18889330 - 18889270
Alignment:
Q  25 tgagtatgaaaccaagtgaacatatactat-attgaatgaactttatgcattagtttgatt 84  Q
    |||||||||||||||||||| ||||| ||| ||||||||||||| ||| ||| || |||||    
T  18889330 tgagtatgaaaccaagtgaatatatattatgattgaatgaacttgatgtattggtatgatt 18889270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 236; Significance: 1e-130; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 15 - 278
Target Start/End: Complemental strand, 9241807 - 9241545
Alignment:
Q  15 tggagatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaatcttt 114  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||    
T  9241807 tggagatgattgagtatgaaaccaagtgaacatatac-atgttgaatgaacttgatgcattagtttgattatgattaattatgtattttctggaatcatt 9241709  T
Q  115 ggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattattaa 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9241708 ggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcatttcaaaggttgaagtattattaa 9241609  T
Q  215 ttggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9241608 ttggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 9241545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 85 - 278
Target Start/End: Original strand, 6261236 - 6261429
Alignment:
Q  85 atgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 184  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6261236 atgattaattgtgtattttctggaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 6261335  T
Q  185 aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6261336 aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 6261429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 85 - 278
Target Start/End: Original strand, 19662512 - 19662705
Alignment:
Q  85 atgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 184  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19662512 atgattaattgtgtattttctggaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 19662611  T
Q  185 aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19662612 aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 19662705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 80 - 275
Target Start/End: Complemental strand, 17634248 - 17634050
Alignment:
Q  80 tgattatgattaattgtgtatttt-ctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatg 178  Q
    |||||||||||||||||||||||| |||||||  |||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  17634248 tgattatgattaattgtgtatttttctggaattgttggattaattatgatggattattgttggttgtgatgtatatttatatttaaataaattatacatg 17634149  T
Q  179 ttgctg--aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttg 275  Q
    ||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17634148 ttgttgtgaattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttg 17634050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 6482676 - 6482558
Alignment:
Q  113 ttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattatt 212  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6482676 ttggatcaattatgatggattattgttgactatgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattatt 6482577  T
Q  213 aattggattgtcgaggtga 231  Q
    ||||||||||||| |||||    
T  6482576 aattggattgtcgtggtga 6482558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 6486143 - 6486025
Alignment:
Q  113 ttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattatt 212  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6486143 ttggatcaattatgatggattattgttgactatgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattatt 6486044  T
Q  213 aattggattgtcgaggtga 231  Q
    ||||||||||||| |||||    
T  6486043 aattggattgtcgtggtga 6486025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 85 - 188
Target Start/End: Original strand, 30644138 - 30644241
Alignment:
Q  85 atgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 184  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30644138 atgattaattgtgtattttctggaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 30644237  T
Q  185 aatt 188  Q
    ||||    
T  30644238 aatt 30644241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 120 - 263
Target Start/End: Complemental strand, 23148921 - 23148776
Alignment:
Q  120 aattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattattaattgg 218  Q
    |||||||||| ||  ||| || |||| |||||||| |||||||||||||||||||||||||| |||| ||| |||||||||||| ||||||||||||||     
T  23148921 aattatgatgaatcgttgatggctgttatgtatatctatatttaaataaattatacatgttgttgaatttcatttcaaaggttggagtattattaattga 23148822  T
Q  219 attgtcgaggtg-aagtcatatttacatatatgcattgatgagtag 263  Q
    ||||| |||||| |||||||||| | |||||||||||| |||||||    
T  23148821 attgttgaggtgtaagtcatattcatatatatgcattgttgagtag 23148776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 120 - 263
Target Start/End: Complemental strand, 23560711 - 23560566
Alignment:
Q  120 aattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattattaattgg 218  Q
    |||||||||| ||  ||| || |||| |||||||| |||||||||||||||||||||||||| |||| ||| |||||||||||| ||||||||||||||     
T  23560711 aattatgatgaatcgttgatggctgttatgtatatctatatttaaataaattatacatgttgttgaatttcatttcaaaggttggagtattattaattga 23560612  T
Q  219 attgtcgaggtg-aagtcatatttacatatatgcattgatgagtag 263  Q
    ||||| |||||| |||||||||| | |||||||||||| |||||||    
T  23560611 attgttgaggtgtaagtcatattcatatatatgcattgttgagtag 23560566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 15 - 109
Target Start/End: Complemental strand, 23264357 - 23264263
Alignment:
Q  15 tggagatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaa 109  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||  |||||||||||    
T  23264357 tggagatgatcgagtatgaaaccaagtgaacatatactatgttgaatgaacttgatgcattggtttgattattattaattgtacattttctggaa 23264263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 15 - 110
Target Start/End: Complemental strand, 23062925 - 23062830
Alignment:
Q  15 tggagatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaat 110  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||  | ||||||||||    
T  23062925 tggagatgattgagtatgaaacctagtgaacatatactatgttgaatgaacttgatgcattggtttgattattattaattgtacaatttctggaat 23062830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 21073733 - 21073814
Alignment:
Q  15 tggagatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgt 96  Q
    |||||||||||| |||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||    
T  21073733 tggagatgattgggtataaaaccaagtgaacatatactatgttgaatgaacttgatgcattagtttgattattattaattgt 21073814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 20914155 - 20914256
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    |||||||||||||| ||||||||||||| ||  ||||||  |||||||||  || ||| |||||||||||||| ||| ||||||| ||||| ||||||||    
T  20914155 tgattatgattaatggtgtattttctgggattgttggattgattatgatgatttgttgatgactgtgatgtatgtttttatttaattaaatcatacatgt 20914254  T
Q  180 tg 181  Q
    ||    
T  20914255 tg 20914256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 21907611 - 21907542
Alignment:
Q  25 tgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaatt 94  Q
    |||||||||||||||||||| ||||||||| |||||||||||| ||| |||||| ||||| | |||||||    
T  21907611 tgagtatgaaaccaagtgaaaatatactatgttgaatgaacttgatgtattagtatgattgttattaatt 21907542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 20648429 - 20648321
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    |||||||||||||| ||| ||||||||||||  ||||||  |||||||||   | ||||||||||||||||||  ||  |||||| ||||| ||||||||    
T  20648429 tgattatgattaatcgtgcattttctggaattgttggattgattatgatgatctgttgttgactgtgatgtatgctttcatttaattaaatcatacatgt 20648330  T
Q  180 tgctgaatt 188  Q
    || ||||||    
T  20648329 tgttgaatt 20648321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 181
Target Start/End: Complemental strand, 22860659 - 22860558
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    |||||||||||| ||||| ||||||||||||  || |||  |||||||||   | ||||||||||||||||||  || ||||||| ||||| ||||||||    
T  22860659 tgattatgattagttgtgcattttctggaattattagattgattatgatgatctgttgttgactgtgatgtatgcttttatttaattaaatcatacatgt 22860560  T
Q  180 tg 181  Q
    ||    
T  22860559 tg 22860558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 22841254 - 22841192
Alignment:
Q  142 ctgtgatgtatatttatatttaaataaattatacatgttgctgaatt--cttttcaaaggttg 202  Q
    |||| |||||||||||||||||||||||||||||| |||| ||||||   |||||||||||||    
T  22841254 ctgttatgtatatttatatttaaataaattatacaagttgttgaatttcattttcaaaggttg 22841192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 187
Target Start/End: Original strand, 24669622 - 24669753
Alignment:
Q  57 tgaatgaactttatgcattagtttgattatgattaattgtg-tattttctggaatct-ttggatcaattatgatggattattgttgactgtgatgtatat 154  Q
    ||||||||||| ||| |  || |||||||| |||||||||| |||||||| ||| || ||| || ||||||||||  || ||| ||| ||||||||||      
T  24669622 tgaatgaacttgatgtaggagcttgattataattaattgtgttattttct-gaagctattgaattaattatgatgatttgttgatgattgtgatgtatgc 24669720  T
Q  155 ttatatttaaataaattatacatgttgctgaat 187  Q
    |||||| ||||||||| |||||||||| |||||    
T  24669721 ttatatctaaataaatcatacatgttgttgaat 24669753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 19035835 - 19035729
Alignment:
Q  82 attatgattaattgtgta-ttttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgtt 180  Q
    |||||||||||||||||| |||||||||||  ||||||  ||||| |||   | ||| |||||||||||||| |||| | |||| ||||| |||||||||    
T  19035835 attatgattaattgtgtacttttctggaattgttggattgattataatgatctgttgatgactgtgatgtatgtttaca-ttaattaaatcatacatgtt 19035737  T
Q  181 gctgaatt 188  Q
    | ||||||    
T  19035736 gttgaatt 19035729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 176
Target Start/End: Complemental strand, 22109712 - 22109681
Alignment:
Q  145 tgatgtatatttatatttaaataaattataca 176  Q
    ||||||||||||||||||||||||||||||||    
T  22109712 tgatgtatatttatatttaaataaattataca 22109681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 23102265 - 23102358
Alignment:
Q  16 ggagatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaat 110  Q
    ||||||||||||||||||| | ||||||  | | ||||| |||||||||||| ||||||| || | | ||| |||||||||  ||||||||||||    
T  23102265 ggagatgattgagtatgaa-cgaagtgagtaaacactatgttgaatgaacttgatgcattggtctcactattattaattgtacattttctggaat 23102358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 187
Target Start/End: Complemental strand, 21903449 - 21903409
Alignment:
Q  147 atgtatatttatatttaaataaattatacatgttgctgaat 187  Q
    ||||||| |||||||||||||||||||||| |||| |||||    
T  21903449 atgtataattatatttaaataaattatacaagttgttgaat 21903409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 25365784 - 25365844
Alignment:
Q  121 attatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 181  Q
    |||||||||  || ||| ||||||||||||||  |||||| ||||||||| ||||||||||    
T  25365784 attatgatgatttgttgatgactgtgatgtatgcttatatctaaataaatcatacatgttg 25365844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 190; Significance: 1e-103; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 85 - 278
Target Start/End: Complemental strand, 110682 - 110489
Alignment:
Q  85 atgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 184  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  110682 atgattaattgtgtattttctggaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 110583  T
Q  185 aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  110582 aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 110489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 25110 - 25001
Alignment:
Q  80 tgattatgattaattgtgt-attttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatg 178  Q
    ||||||| ||||||||||| ||||||||||    ||| || ||||||||||  || ||| ||||||||||||||  |||||| ||||||||| |||||||    
T  25110 tgattataattaattgtgttattttctggagctattgaattaattatgatgatttgttgatgactgtgatgtatgcttatatctaaataaatcatacatg 25011  T
Q  179 ttgctgaatt 188  Q
    ||| ||||||    
T  25010 ttgttgaatt 25001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 188
Target Start/End: Complemental strand, 35860 - 35811
Alignment:
Q  139 tgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 188  Q
    ||||||||||||||  |||||| ||||||||| |||||||||| ||||||    
T  35860 tgactgtgatgtatgcttatatctaaataaatcatacatgttgttgaatt 35811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 190; Significance: 1e-103; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 85 - 278
Target Start/End: Original strand, 37598974 - 37599167
Alignment:
Q  85 atgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 184  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37598974 atgattaattgtgtattttctggaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 37599073  T
Q  185 aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37599074 aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 37599167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 85 - 278
Target Start/End: Complemental strand, 22336596 - 22336403
Alignment:
Q  85 atgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 184  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22336596 atgattaattgtgtattttctgaaatcgttggatcaattatgatggattattgttgactgtggtgtatatttatatttaaataaattatacatgttgctg 22336497  T
Q  185 aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22336496 aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 22336403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 85 - 278
Target Start/End: Original strand, 28371113 - 28371306
Alignment:
Q  85 atgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 184  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28371113 atgattaattgtgtattttctagaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 28371212  T
Q  185 aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 278  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28371213 aattcttttcaaaggttgaagtattattgattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 28371306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 85 - 278
Target Start/End: Complemental strand, 22340134 - 22339941
Alignment:
Q  85 atgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 184  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  22340134 atgattaattgtgtattttctgaaatcgttggatcaattatgatggattattgttgactgtggtgtataattatatttaaataaattatacatgttgctg 22340035  T
Q  185 aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22340034 aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 22339941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 85 - 278
Target Start/End: Complemental strand, 42960571 - 42960376
Alignment:
Q  85 atgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 184  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42960571 atgattaattgtgtattttctggaatcgttggatcaattatgatgggttattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 42960472  T
Q  185 aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattg--atgagtagtggttgtcgttgatg 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  42960471 aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatatgagtagtggttgtcgttgatg 42960376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 128 - 278
Target Start/End: Original strand, 38145485 - 38145635
Alignment:
Q  128 tggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattattaattggattgtcgag 227  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38145485 tggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattattaattggattgtcgag 38145584  T
Q  228 gtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38145585 gtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 38145635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 19511354 - 19511236
Alignment:
Q  113 ttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattatt 212  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19511354 ttggatcaattatgatggattattgttgactatgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattatt 19511255  T
Q  213 aattggattgtcgaggtga 231  Q
    ||||||||||||| |||||    
T  19511254 aattggattgtcgtggtga 19511236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 80 - 263
Target Start/End: Original strand, 17022602 - 17022788
Alignment:
Q  80 tgattatgattaattgtgt-attttctggaatctttggatcaat-tatgatggattattgttgactgtgatgtatatttatatttaaataaattatacat 177  Q
    ||||||||||||||||||| ||||| |||| || ||| || ||| ||||||| ||||||| || |||| ||||||||| |||||||||||||||||||||    
T  17022602 tgattatgattaattgtgttattttttggagtcattgaattaatgtatgatgaattattgatggctgttatgtatatt-atatttaaataaattatacat 17022700  T
Q  178 gttgctgaa-ttcttttcaaaggttgaagtattattaattggattgtcgaggtg-aagtcatatttacatatatgcattgatgagtag 263  Q
    |||| |||| ||| |||||| ||||| ||||||||||||||  |||| |||||| |||||||||||| |||||||||||| |||||||    
T  17022701 gttgttgaatttcatttcaagggttggagtattattaattgagttgttgaggtgtaagtcatatttatatatatgcattgttgagtag 17022788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 23112490 - 23112571
Alignment:
Q  15 tggagatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgt 96  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||    
T  23112490 tggagatgattgagtatgaaaccaagtgaacatatactatgttgaatgaacttgatgcattagtttgattattattaattgt 23112571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 181
Target Start/End: Complemental strand, 10035471 - 10035370
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    |||||||||| ||||||||||||||||||||  |||||| |||||||||| ||| ||| |||||||||||||| ||||||| ||| ||||| ||||||||    
T  10035471 tgattatgatcaattgtgtattttctggaattgttggattaattatgatgaattgttgatgactgtgatgtatgtttatatctaattaaatcatacatgt 10035372  T
Q  180 tg 181  Q
    ||    
T  10035371 tg 10035370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 84 - 180
Target Start/End: Original strand, 23444008 - 23444104
Alignment:
Q  84 tatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgtt 180  Q
    ||||||||||||| |||||||||| ||  |||||| | |||||||| ||| ||| |||||||||||||| ||||||||||||||||| |||||||||    
T  23444008 tatgattaattgtatattttctgggattgttggattacttatgatgaattgttgatgactgtgatgtatgtttatatttaaataaatcatacatgtt 23444104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 80 - 181
Target Start/End: Complemental strand, 18819262 - 18819161
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    ||||||||| ||||| |||||||||||||||  |||||| ||||||||||  || ||| |||||||||||||| ||||||| ||| ||||| ||||||||    
T  18819262 tgattatgactaattttgtattttctggaattgttggattaattatgatgacttgttgatgactgtgatgtatgtttatatctaattaaatcatacatgt 18819163  T
Q  180 tg 181  Q
    ||    
T  18819162 tg 18819161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 21901683 - 21901784
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    |||||||||||||||||||||||| ||||||  |||||| |||||||| |  || ||| |||||||||||||| ||||||| ||| ||||| ||||||||    
T  21901683 tgattatgattaattgtgtattttttggaattgttggattaattatgaagatttgttggtgactgtgatgtatgtttatatctaattaaatcatacatgt 21901782  T
Q  180 tg 181  Q
    ||    
T  21901783 tg 21901784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 57 - 181
Target Start/End: Complemental strand, 21888932 - 21888808
Alignment:
Q  57 tgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatattt 156  Q
    ||||||||||| ||| || ||  |||||||||||||| ||||||||||||| ||  ||||||  |||||||||  || ||| |||||||||||||| |||    
T  21888932 tgaatgaacttgatgtatgagcatgattatgattaatggtgtattttctgggattgttggattgattatgatgatttgttgatgactgtgatgtatgttt 21888833  T
Q  157 atatttaaataaattatacatgttg 181  Q
    |||| ||| ||||| ||||||||||    
T  21888832 atatctaattaaatcatacatgttg 21888808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 57 - 181
Target Start/End: Complemental strand, 25013934 - 25013810
Alignment:
Q  57 tgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatattt 156  Q
    ||||||||||| ||| || ||  ||||||||||| |||||||||||||||||||   ||||| || |||||||   | ||| |||||||||||||| |||    
T  25013934 tgaatgaacttgatgtatgagcatgattatgattgattgtgtattttctggaattgctggattaaatatgatgacctgttgatgactgtgatgtatgttt 25013835  T
Q  157 atatttaaataaattatacatgttg 181  Q
    |||||||| ||||| ||||||||||    
T  25013834 atatttaattaaatcatacatgttg 25013810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 15193821 - 15193921
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    |||||||||| ||| ||||| ||||||||||  |||||| || ||||||| |||  || ||| |||||||||| ||||||||||| ||||| ||||||||    
T  15193821 tgattatgatcaatcgtgtactttctggaattgttggattaactatgatg-atttgtgatgattgtgatgtatgtttatatttaattaaatcatacatgt 15193919  T
Q  180 tg 181  Q
    ||    
T  15193920 tg 15193921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 18408765 - 18408834
Alignment:
Q  25 tgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaatt 94  Q
    ||||||||||||||||| || ||||||||| |||||||||||| ||| |||||| ||||| | |||||||    
T  18408765 tgagtatgaaaccaagttaaaatatactatgttgaatgaacttgatgtattagtatgattgttattaatt 18408834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 10817121 - 10817019
Alignment:
Q  86 tgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 185  Q
    |||| |||||| ||||||||| |||  ||||||  | ||| |||  || ||| |||||||||||||| |||| |||||| ||||| |||||||||| |||    
T  10817121 tgatcaattgtatattttctgaaattgttggattgactataatgatttgttgatgactgtgatgtatgtttacatttaattaaatcatacatgttgttga 10817022  T
Q  186 att 188  Q
    |||    
T  10817021 att 10817019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 22439533 - 22439626
Alignment:
Q  16 ggagatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaat 110  Q
    ||||||||||||||||||| ||||||||  | | ||||| ||||||||| || ||||||| || ||| | | |||||||||  ||||||||||||    
T  22439533 ggagatgattgagtatgaa-ccaagtgagtaaacactatgttgaatgaatttgatgcattggtctgacttttattaattgtacattttctggaat 22439626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 21495179 - 21495118
Alignment:
Q  120 aattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 181  Q
    ||||||||||  || ||| |||||||||||||| ||||||| | ||||||| ||||||||||    
T  21495179 aattatgatgatttgttgatgactgtgatgtatgtttatatctcaataaatcatacatgttg 21495118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 23539154 - 23539046
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    ||||| |||| |||||| ||||| |||||||  ||||||  | ||| |||  || ||| ||||||||||||||  ||| |||||| ||||| ||||||||    
T  23539154 tgattgtgatcaattgtatatttactggaattgttggattgactataatgatttgttgatgactgtgatgtatgattacatttaattaaatcatacatgt 23539055  T
Q  180 tgctgaatt 188  Q
    || ||||||    
T  23539054 tgttgaatt 23539046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 85 - 278
Target Start/End: Original strand, 2537 - 2730
Alignment:
Q  85 atgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 184  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2537 atgattaattgtgtattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 2636  T
Q  185 aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatg 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2637 aattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatgtttacatatatgcattgatgagtagtggttgtcgttgatg 2730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 156; Significance: 7e-83; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 80 - 275
Target Start/End: Original strand, 9053 - 9248
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    ||||||||||||||||||||||||||| |||  |||||| |||||||||||||||||||||  | ||||||||||||||||||||||||||||||| |||    
T  9053 tgattatgattaattgtgtattttctgaaattgttggattaattatgatggattattgttggttatgatgtatatttatatttaaataaattatacttgt 9152  T
Q  180 tgctgaattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttg 275  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9153 tgttgaattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtagttg 9248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 153; Significance: 4e-81; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 80 - 275
Target Start/End: Complemental strand, 33089233 - 33089037
Alignment:
Q  80 tgattatgattaattgtgtatttt-ctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatg 178  Q
    |||||||||||||||||||||||| ||||||   |||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  33089233 tgattatgattaattgtgtatttttctggaaatgttggattaattatgatggattattgatggctgtgatgtatatttatatttaaataaattatacatg 33089134  T
Q  179 ttgctgaattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttg 275  Q
    ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33089133 ttgttgaattcttttcaaaggttgaagtattattaattgaattgtcgaggtgaagtcatatttacatatatgcattgacgagtagtggttgtcgttg 33089037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 80 - 275
Target Start/End: Original strand, 25624483 - 25624679
Alignment:
Q  80 tgattatgattaattgtgtattttc-tggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatg 178  Q
    ||||||||||||||| ||||| ||| ||||||  | |||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  25624483 tgattatgattaattatgtatcttcatggaattgtcggattaattatgatggattattgctggctgtgatgtatatttatatttaaataaattatacatg 25624582  T
Q  179 ttgctgaattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttg 275  Q
    ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25624583 ttgttgaactcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgaatagtggttgtcgttg 25624679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 44476591 - 44476473
Alignment:
Q  113 ttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattatt 212  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44476591 ttggatcaattatgatggattattgttgactatgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattatt 44476492  T
Q  213 aattggattgtcgaggtga 231  Q
    ||||||||||||| |||||    
T  44476491 aattggattgtcgtggtga 44476473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 44479853 - 44479735
Alignment:
Q  113 ttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattatt 212  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44479853 ttggatcaattatgatggattattgttgactatgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattatt 44479754  T
Q  213 aattggattgtcgaggtga 231  Q
    ||||||||||||| |||||    
T  44479753 aattggattgtcgtggtga 44479735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 121 - 275
Target Start/End: Original strand, 20011982 - 20012137
Alignment:
Q  121 attatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattattaattggat 220  Q
    ||||||||| ||| ||| ||  ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||| ||    
T  20011982 attatgatgaattgttgatggttgtgatgtatatttatatttaaataaattatacatgttgttaaattcttttcaaaggttgaagtatcattaattgaat 20012081  T
Q  221 tgtcgaggtg-aagtcatatttacatatatgcattgatgagtagtggttgtcgttg 275  Q
    ||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  20012082 tgttgaggtgtaagttatatttacatatatgcattgatgagtagtggttgtcgttg 20012137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 80 - 180
Target Start/End: Complemental strand, 22744059 - 22743959
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    |||||||||||||||||||||||||||||||  |||||| ||||||||||  || ||| |||||||||||||| ||||||| ||| ||||| ||||||||    
T  22744059 tgattatgattaattgtgtattttctggaattgttggattaattatgatgatttgttgatgactgtgatgtatgtttatatctaattaaatcatacatgt 22743960  T
Q  180 t 180  Q
    |    
T  22743959 t 22743959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 110
Target Start/End: Complemental strand, 18613465 - 18613370
Alignment:
Q  15 tggagatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaat 110  Q
    |||||||||||||||||||||||| ||||||||||||||  |||||||||||| ||||| | |||||||||| |||||||||  ||||||| ||||    
T  18613465 tggagatgattgagtatgaaaccatgtgaacatatactacgttgaatgaacttgatgcactggtttgattattattaattgtacattttctagaat 18613370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 21683510 - 21683612
Alignment:
Q  80 tgattatgattaattgtgtatttt-ctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatg 178  Q
    |||||||||||||||||| ||||| |||||||  ||||||  ||||| |||   | |||||||||||||||||| ||||||||||||||||| |||||||    
T  21683510 tgattatgattaattgtgcatttttctggaattgttggattgattataatgacctgttgttgactgtgatgtatgtttatatttaaataaatcatacatg 21683609  T
Q  179 ttg 181  Q
    |||    
T  21683610 ttg 21683612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 21687859 - 21687961
Alignment:
Q  80 tgattatgattaattgtgtatttt-ctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatg 178  Q
    |||||||||||||||||| ||||| |||||||  ||||||  ||||| |||   | |||||||||||||||||| ||||||||||||||||| |||||||    
T  21687859 tgattatgattaattgtgcatttttctggaattgttggattgattataatgacctgttgttgactgtgatgtatgtttatatttaaataaatcatacatg 21687958  T
Q  179 ttg 181  Q
    |||    
T  21687959 ttg 21687961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 20005446 - 20005547
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    ||||||||||| |||||||||||||||| ||  |||||| ||||||||||  || |||  |||| |||||||| ||||||||||| ||||| ||||||||    
T  20005446 tgattatgattgattgtgtattttctggcattgttggattaattatgatgacttgttgacgactatgatgtatgtttatatttaattaaatcatacatgt 20005545  T
Q  180 tg 181  Q
    ||    
T  20005546 tg 20005547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 21690253 - 21690361
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    |||||||||||| ||||| ||||||||||||  || |||  |||||||||   | ||||||||||||||||||  || ||||||| ||||| ||||||||    
T  21690253 tgattatgattagttgtgcattttctggaattattagattgattatgatgatctgttgttgactgtgatgtatgcttttatttaattaaatcatacatgt 21690352  T
Q  180 tgctgaatt 188  Q
    || ||||||    
T  21690353 tgttgaatt 21690361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 273
Target Start/End: Original strand, 22521673 - 22521808
Alignment:
Q  142 ctgtgatgtatatttatatttaaataaattatacatgttgctgaatt--cttttcaaaggttgaagtattattaattggat-tgtcgaggtg-aagtcat 237  Q
    |||| ||||||| |||||||||||||||||||||| |||| ||||||   |||| ||||||||  |||| |||| |||  | ||| |||||| |||||||    
T  22521673 ctgttatgtataattatatttaaataaattatacaagttgttgaatttcatttttaaaggttgttgtatcattagttgactatgttgaggtgtaagtcat 22521772  T
Q  238 atttacatatatgcattgatgagtagtggttgtcgt 273  Q
    ||| | |||||||||||| |||||||  ||||||||    
T  22521773 attcatatatatgcattgttgagtagcagttgtcgt 22521808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 15267488 - 15267426
Alignment:
Q  142 ctgtgatgtatatttatatttaaataaattatacatgttgctgaatt--cttttcaaaggttg 202  Q
    |||| |||||||||||||||||||||||||||||| |||| ||||||   |||||||||||||    
T  15267488 ctgttatgtatatttatatttaaataaattatacaagttgttgaatttcattttcaaaggttg 15267426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 176
Target Start/End: Original strand, 15003868 - 15003899
Alignment:
Q  145 tgatgtatatttatatttaaataaattataca 176  Q
    ||||||||||||||||||||||||||||||||    
T  15003868 tgatgtatatttatatttaaataaattataca 15003899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 80 - 275
Target Start/End: Complemental strand, 26651 - 26456
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    |||||||||||||||||||||| ||||||||  |||||| ||||||||||||||||||||| |||||| | ||||||||||||||||| ||||||||| |    
T  26651 tgattatgattaattgtgtattctctggaattgttggattaattatgatggattattgttggctgtgaaggatatttatatttaaatagattatacatat 26552  T
Q  180 tgctgaattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttg 275  Q
    || ||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26551 tgttgaatccttttcaaaggttggggtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttg 26456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0669 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 120 - 275
Target Start/End: Original strand, 1582 - 1738
Alignment:
Q  120 aattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattattaattgga 219  Q
    |||||||||||||| ||| ||  ||||| ||||||||||||||||| ||||||||||||||| |||||||||||| || ||| |||||| |||||||| |    
T  1582 aattatgatggattgttgatggttgtgacgtatatttatatttaaacaaattatacatgttgttgaattcttttcgaatgtttaagtatcattaattgaa 1681  T
Q  220 ttgtcgaggtg-aagtcatatttacatatatgcattgatgagtagtggttgtcgttg 275  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  1682 ttgttgaggtgtaagtcatatttacatatatgcattgatgagtagtggctgtcgttg 1738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 142 - 275
Target Start/End: Complemental strand, 770 - 635
Alignment:
Q  142 ctgtgatgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattattaattggattgtcgaggtg-aagtcatat 239  Q
    |||| ||||||||||||||||||||||||||||||||||| |||| ||| |||||||| ||||||||| |||||||| ||||| || ||| |||||||||    
T  770 ctgttatgtatatttatatttaaataaattatacatgttgttgaatttcatttcaaagattgaagtatcattaattgaattgttgacgtgtaagtcatat 671  T
Q  240 ttacatatatgcattgatgagtagtggttgtcgttg 275  Q
    | ||||||||||| || ||||| |||||||||||||    
T  670 tcacatatatgcaatgttgagtcgtggttgtcgttg 635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 15 - 109
Target Start/End: Original strand, 102731 - 102825
Alignment:
Q  15 tggagatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaa 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||  |||||||||||    
T  102731 tggagatgattgagtatgaaaccaagtgaacatatactatgttgaatgaacttgatgcattggtttgattattattaattgtacattttctggaa 102825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 1263 - 1182
Alignment:
Q  15 tggagatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgt 96  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||    
T  1263 tggagatgattgagtatgaaaccaagtgaacatatactatgttgaatgaacttgatgcattagtttgattattattaattgt 1182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 110
Target Start/End: Original strand, 15800 - 15895
Alignment:
Q  15 tggagatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaat 110  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||  ||||| ||||||    
T  15800 tggagatgattgagtatgaaaccaagtgaacatatactatgttgaatgaacttgatgcattggtttgattattattaattgtacattttttggaat 15895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 2803 - 2844
Alignment:
Q  139 tgactgtgatgtatatttatatttaaataaattatacatgtt 180  Q
    |||||||| || ||||||||||||||||||||||||||||||    
T  2803 tgactgtgttgcatatttatatttaaataaattatacatgtt 2844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 147 - 273
Target Start/End: Original strand, 6897 - 7025
Alignment:
Q  147 atgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattattaattggattgtcgaggtg-aagtcatatttaca 244  Q
    ||||||||||||| ||||||||||||||||||||| |||| ||| |||||||||||||||||| |||| ||| ||||| |||||| |||||||||| | |    
T  6897 atgtatatttatacttaaataaattatacatgttgttgaatttcatttcaaaggttgaagtatcattagttgaattgttgaggtgtaagtcatattcata 6996  T
Q  245 tatatgcattgatgagtagtggttgtcgt 273  Q
    ||||||||||| |||||||  ||||||||    
T  6997 tatatgcattgttgagtagcagttgtcgt 7025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 143 - 273
Target Start/End: Complemental strand, 31800 - 31667
Alignment:
Q  143 tgtgatgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattattaattggattg-tcgaggtg-aagtcatat 239  Q
    |||| |||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||| |||| ||| | || | |||||| |||||||||    
T  31800 tgtgttgtatatttatatttaaataaattatacatgttgttgaatttcatttcaaaggttgaagtatcattagttgaagtgttggaggtgtaagtcatat 31701  T
Q  240 ttacatatatgcattgatgagtagtggttgtcgt 273  Q
    | | |||||||||||| |||||||| ||||||||    
T  31700 tcatatatatgcattgttgagtagtagttgtcgt 31667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 142 - 273
Target Start/End: Complemental strand, 21134 - 21000
Alignment:
Q  142 ctgtgatgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattattaattggattg-tcgaggtg-aagtcata 238  Q
    ||||| |||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||| |||| ||| | || | |||||| ||||||||    
T  21134 ctgtgttgtatatttatatttaaataaattatacatgttgttgaatttcatttcaaaggttgaagtatcattagttgaagtgttggaggtgtaagtcata 21035  T
Q  239 tttacatatatgcattgatgagtagtggttgtcgt 273  Q
    || | |||||||||||| || ||||| ||||||||    
T  21034 ttcatatatatgcattgttgggtagtagttgtcgt 21000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 83 - 153
Target Start/End: Complemental strand, 68218 - 68148
Alignment:
Q  83 ttatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtata 153  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||||    
T  68218 ttatgattaattgtgtattttctggaatcgttggattaattatgatggattattgttgattgtgatgtata 68148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 65340 - 65265
Alignment:
Q  21 tgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgt 96  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||| ||||||| |||||||||    
T  65340 tgattgagtatgaaaccaagtgaatatatactatgttgaatgaacttgatgcattagtatgattattattaattgt 65265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 92487 - 92551
Alignment:
Q  143 tgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagta 207  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| ||||    
T  92487 tgtgatgtatatttatatctaaataaattatacatgttgttgaattctttttaaaggttgtagta 92551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 1309 - 1265
Alignment:
Q  15 tggagatgattgagtatgaaaccaagtgaacatatactatattga 59  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||    
T  1309 tggatatgattgagtatgaaaccaagtgaacatatactatgttga 1265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1853 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold1853
Description:

Target: scaffold1853; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 627 - 728
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggat-tattgttgactgtgatgtatatttatatttaaataaattatacatg 178  Q
    |||||||||||||||||||||||||||||||  |||||| |||||||| |||| | |||||||||||||||||| |||| |||||| ||||| |||||||    
T  627 tgattatgattaattgtgtattttctggaattgttggattaattatga-ggatctgttgttgactgtgatgtatgtttacatttaattaaatcatacatg 725  T
Q  179 ttg 181  Q
    |||    
T  726 ttg 728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1336 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold1336
Description:

Target: scaffold1336; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 173 - 273
Target Start/End: Original strand, 660 - 761
Alignment:
Q  173 tacatgttgctgaattcttttcaaaggttgaagtattattaattggattgtcgaggtg-aagtcatatttacatatatgcattgatgagtagtggttgtc 271  Q
    ||||||||| |||||||||||||||||||||||||| |||| ||| ||||| | |||| |||||||||  ||||||||| |||| |||||||||||||||    
T  660 tacatgttgttgaattcttttcaaaggttgaagtatcattagttgaattgttggggtgtaagtcatatacacatatatgtattgttgagtagtggttgtc 759  T
Q  272 gt 273  Q
    ||    
T  760 gt 761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 595 - 502
Alignment:
Q  18 agatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatga-ttaattgtgtattttctggaat 110  Q
    |||||||||||||| | |||||||||||||||||||| |||||||||||| ||||||| |||||||||| | ||||||||  ||||||||||||    
T  595 agatgattgagtatcataccaagtgaacatatactatgttgaatgaacttgatgcattggtttgattattatttaattgtacattttctggaat 502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 54; Significance: 5e-22; HSPs: 3)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 72723 - 72824
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    |||||||||||||||||||||||||||||||  |||||| ||||||||||  || ||| |||||||||| ||| ||||||| ||| ||||| ||||||||    
T  72723 tgattatgattaattgtgtattttctggaattgttggattaattatgatgatttgttgatgactgtgatatatgtttatatctaattaaataatacatgt 72822  T
Q  180 tg 181  Q
    ||    
T  72823 tg 72824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 181
Target Start/End: Original strand, 46547 - 46649
Alignment:
Q  79 ttgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatg 178  Q
    ||||||||||||||||||||||||| || |||  |||||| ||||||||||  || ||| ||| |||||||||| ||||||||||| ||||| |||||||    
T  46547 ttgattatgattaattgtgtattttatgaaattgttggattaattatgatgatttgttgatgattgtgatgtatgtttatatttaattaaatcatacatg 46646  T
Q  179 ttg 181  Q
    |||    
T  46647 ttg 46649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 82028 - 82203
Alignment:
Q  15 tggagatgattgagtatgaaaccaagtgaacatatactatattgaatgaactt-tatgcattagtttgattatgattaattgtgta-ttttctggaatct 112  Q
    |||| ||| ||||||||||||||||||||| ||||| ||| ||||||||||||  |||||||||| ||||||| |||||||||| | |||||| ||||      
T  82028 tggatatgtttgagtatgaaaccaagtgaatatatattatgttgaatgaacttgaatgcattagtatgattattattaattgtgcatttttctagaattg 82127  T
Q  113 ttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 188  Q
    ||||||   || |||||   |  |||||| ||||||||||  || ||||||| ||||| |||||||||| ||||||    
T  82128 ttggattggttttgatgatctgctgttgattgtgatgtatgcttttatttaattaaatcatacatgttgttgaatt 82203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 116106 - 116018
Alignment:
Q  17 gagatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgtgtattttctg 106  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||| | |||||||| |||||||||  ||||||||    
T  116106 gagatgattgagtatgaaatcaagtgaacatatactatgttgaatgaacttgatgcatt-ggttgattattattaattgtacattttctg 116018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 142 - 264
Target Start/End: Complemental strand, 384459 - 384335
Alignment:
Q  142 ctgtgatgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattattaattggattgtcgaggtg-aagtcatat 239  Q
    |||| ||||||||||||| ||||||||||||||||||||| |||| ||| |||||||| ||||||||| |||| ||| |  || |||||| |||||||||    
T  384459 ctgttatgtatatttatacttaaataaattatacatgttgttgaatttcatttcaaagattgaagtatcattagttgaagggttgaggtgtaagtcatat 384360  T
Q  240 ttacatatatgcattgatgagtagt 264  Q
    | | ||||||||||||  |||||||    
T  384359 tcatatatatgcattgtcgagtagt 384335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 80 - 273
Target Start/End: Complemental strand, 5615 - 5417
Alignment:
Q  80 tgattatgattaattgtgt-atttt-ctggaatctttggatcaattatgatggattattgttgactg-tgatgtatatttatatttaaataaattataca 176  Q
    ||||||| ||||||||||| ||||| ||||| |  ||| || || ||||||| ||||||| || ||| | |||||||||||||  |||||||||||||||    
T  5615 tgattataattaattgtgttattttactggagttgttgaattaagtatgatgaattattgatggctgattatgtatatttataactaaataaattataca 5516  T
Q  177 tgttgctgaa-ttcttttcaaaggttgaagtattattaattggattgtcgaggtg-aagtcatatttacatatatgcattgatgagtagtggttgtcgt 273  Q
    ||||| |||| ||| |||||||  |||  ||||||||||||| || || |||||| |||||||||| | |||||||||||| |||||| || |||||||    
T  5515 tgttgttgaatttcatttcaaatattggtgtattattaattgaatcgttgaggtgtaagtcatattcatatatatgcattgttgagtattgattgtcgt 5417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 57 - 181
Target Start/End: Complemental strand, 168 - 44
Alignment:
Q  57 tgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatattt 156  Q
    ||||||||||| ||| || ||  |||||||||| ||||||||||||||| ||||  |||||| || ||||||| ||| ||| ||||||| |||||| |||    
T  168 tgaatgaacttgatgtatgagcatgattatgatcaattgtgtattttctagaattgttggattaactatgatgaattgttgatgactgtaatgtatgttt 69  T
Q  157 atatttaaataaattatacatgttg 181  Q
    | |||||| ||||| ||||||||||    
T  68 acatttaattaaatcatacatgttg 44  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 57 - 181
Target Start/End: Complemental strand, 13978 - 13854
Alignment:
Q  57 tgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatattt 156  Q
    ||||||||||| ||| || ||  |||||||||| ||||||||||||||||||||  |||||| || ||||||  ||| ||| ||||||| |||||| |||    
T  13978 tgaatgaacttgatgtatgagcatgattatgatcaattgtgtattttctggaattgttggattaactatgatcaattgttgatgactgtaatgtatgttt 13879  T
Q  157 atatttaaataaattatacatgttg 181  Q
    | |||||| ||||| ||||||||||    
T  13878 acatttaattaaatcatacatgttg 13854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 57 - 181
Target Start/End: Complemental strand, 12804 - 12681
Alignment:
Q  57 tgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatattt 156  Q
    ||||||||||| ||| || ||  |||||||||| |||||||||||| |||||||  |||||| ||||||||||  || ||| |||||||||||||| |||    
T  12804 tgaatgaacttgatgtatgagcatgattatgatcaattgtgtattt-ctggaattgttggattaattatgatgatttgttgatgactgtgatgtatgttt 12706  T
Q  157 atatttaaataaattatacatgttg 181  Q
    |||| ||| ||||| ||||||||||    
T  12705 atatctaattaaatcatacatgttg 12681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 22568 - 22669
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    |||||||||| ||||||||||||||||||||   ||||| || |||||||  || ||| |||||||||||||| |||| |||||| ||||| ||||||||    
T  22568 tgattatgatcaattgtgtattttctggaattgctggattaactatgatgatttgttgatgactgtgatgtatgtttacatttaattaaatcatacatgt 22667  T
Q  180 tg 181  Q
    ||    
T  22668 tg 22669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 26765 - 26866
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    |||||||||| ||||||||||||||||||||   ||||| || |||||||  || ||| |||||||||||||| |||| |||||| ||||| ||||||||    
T  26765 tgattatgatcaattgtgtattttctggaattgatggattaactatgatgatttgttgatgactgtgatgtatgtttacatttaattaaatcatacatgt 26864  T
Q  180 tg 181  Q
    ||    
T  26865 tg 26866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 178
Target Start/End: Original strand, 61816 - 61936
Alignment:
Q  57 tgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatattt 156  Q
    ||||||||||| ||| || ||  ||||||||||| |||||||||||||||||||   ||||| ||||||||||  || ||| |||||||||||||| |||    
T  61816 tgaatgaacttgatgtatgagcatgattatgattgattgtgtattttctggaattgctggattaattatgatgacttgttgatgactgtgatgtatgttt 61915  T
Q  157 atatttaaataaattatacatg 178  Q
    ||| |||| ||||| |||||||    
T  61916 ata-ttaattaaatcatacatg 61936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 3607 - 3707
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    ||||||||||||||| |||||||||||||||  |||||| ||||||||||  || ||| |||||||||||||| |||||||  || ||||| ||||||||    
T  3607 tgattatgattaatt-tgtattttctggaattgttggattaattatgatgatttgttgatgactgtgatgtatgtttatatcgaattaaatcatacatgt 3705  T
Q  180 tg 181  Q
    ||    
T  3706 tg 3707  T

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Target: scaffold0485 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 273
Target Start/End: Complemental strand, 3056 - 2921
Alignment:
Q  142 ctgtgatgtatatttatatttaaataaattatacatgttgctgaatt--cttttcaaaggttgaagtattattaattggat--tgtcgaggtg-aagtca 236  Q
    |||| |||||||||||||||||||||||||||||| |||| ||||||   |||||||||||||  |||| |||| || |||  ||| |||||| ||||||    
T  3056 ctgttatgtatatttatatttaaataaattatacaagttgttgaatttcattttcaaaggttgttgtatcattagtt-gatcatgttgaggtgtaagtca 2958  T
Q  237 tatttacatatatgcattgatgagtagtggttgtcgt 273  Q
    |||||| ||||||||| || |||||||  ||||||||    
T  2957 tatttatatatatgcactgttgagtagcagttgtcgt 2921  T

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Target: scaffold0261 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 181
Target Start/End: Original strand, 10482 - 10580
Alignment:
Q  84 tatgattaattgtgtatttt-ctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 181  Q
    |||||||||||||||||||| |||| ||  |||||| | ||||| || ||| ||| |||||||||||||| ||||||||||||||||| ||||| ||||    
T  10482 tatgattaattgtgtatttttctgggattgttggattacttatgttgaattgttgatgactgtgatgtatgtttatatttaaataaatcatacaagttg 10580  T

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Target: scaffold0261; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 181
Target Start/End: Original strand, 18661 - 18759
Alignment:
Q  84 tatgattaattgtgtatttt-ctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 181  Q
    |||||||||||||||||||| |||| ||  |||||| | ||||| || ||| ||| |||||||||||||| ||||||||||||||||| ||||| ||||    
T  18661 tatgattaattgtgtatttttctgggattgttggattacttatgttgaattgttgatgactgtgatgtatgtttatatttaaataaatcatacaagttg 18759  T

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Target: scaffold1061 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold1061
Description:

Target: scaffold1061; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 1632 - 1555
Alignment:
Q  25 tgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgtgtattt 102  Q
    |||||||||||||||||||| ||||||||  |||||||||| | |||||||||| ||||| | |||||||||| ||||    
T  1632 tgagtatgaaaccaagtgaatatatactaggttgaatgaacctgatgcattagtatgattgttattaattgtgcattt 1555  T

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Target: scaffold0007 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 207538 - 207647
Alignment:
Q  80 tgattatgattaattgtgtatttt-ctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatg 178  Q
    ||||||||||||||| |||||||| |||| ||  |||||| | ||||||||  || ||| ||||| |||||||| ||||||||||| ||||| |||||||    
T  207538 tgattatgattaattttgtatttttctgggattgttggattacttatgatgatttgttgatgactatgatgtatgtttatatttaattaaatcatacatg 207637  T
Q  179 ttgctgaatt 188  Q
    ||| ||||||    
T  207638 ttgttgaatt 207647  T

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Target: scaffold0331 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 18851 - 18743
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    |||||||||||| ||||| ||||||||||||  || |||  |||||||||   | ||||||||||||||||||  || ||||||| ||||| ||||||||    
T  18851 tgattatgattagttgtgcattttctggaattatttgattgattatgatgatctgttgttgactgtgatgtatgcttttatttaattaaatcatacatgt 18752  T
Q  180 tgctgaatt 188  Q
    || ||||||    
T  18751 tgttgaatt 18743  T

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Target: scaffold0165 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 18214 - 18146
Alignment:
Q  120 aattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 188  Q
    |||||||||| ||| ||| ||||||||||||||| |||||| ||||||||| |||||||||| ||||||    
T  18214 aattatgatgaattgttgatgactgtgatgtatacttatatctaaataaatcatacatgttgttgaatt 18146  T

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Target: scaffold0069 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 29569 - 29497
Alignment:
Q  142 ctgtgatgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattatta 213  Q
    |||| |||||||||||||||||||||||||||||| |||| |||| ||| ||||||||||||| |||| ||||    
T  29569 ctgttatgtatatttatatttaaataaattatacaagttgttgaatttcatttcaaaggttgatgtatcatta 29497  T

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Target: scaffold0069; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 34810 - 34743
Alignment:
Q  142 ctgtgatgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtat 208  Q
    |||| |||||||||||||||||||||||||||||| |||| |||| ||| ||||||||||||| ||||    
T  34810 ctgttatgtatatttatatttaaataaattatacaagttgttgaatttcatttcaaaggttgatgtat 34743  T

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Target: scaffold0011 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 21550 - 21622
Alignment:
Q  142 ctgtgatgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattatta 213  Q
    |||| |||||||||||||||||||||||||||||| |||| |||| ||| ||||||||||||| |||| ||||    
T  21550 ctgttatgtatatttatatttaaataaattatacaagttgttgaatttcatttcaaaggttgatgtatcatta 21622  T

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Target: scaffold0011; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 154487 - 154379
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    |||||||||||| ||||| ||||||||||||  ||| ||  |||||||||   | ||||||||||||||||||  || ||||||| ||| | ||| ||||    
T  154487 tgattatgattagttgtgcattttctggaattattgaattgattatgatgatctgttgttgactgtgatgtatgcttttatttaattaagtcataaatgt 154388  T
Q  180 tgctgaatt 188  Q
    || ||||||    
T  154387 tgttgaatt 154379  T

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Target: scaffold0326 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 181
Target Start/End: Original strand, 5216 - 5313
Alignment:
Q  83 ttatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 181  Q
    ||||||| ||||||||||||||||||||  |||||| || ||| |||  |||| | |||||||||||||| |||| |||||| ||||| ||||||||||    
T  5216 ttatgatcaattgtgtattttctggaattgttggattaactataatgatttat-gatgactgtgatgtatgtttacatttaattaaatcatacatgttg 5313  T

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Target: scaffold0077 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 4424 - 4517
Alignment:
Q  16 ggagatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaat 110  Q
    ||||||||||||||||||| ||||||||  | | ||||| |||||||||||| ||||||| || ||| ||| |||||||||  ||||||||||||    
T  4424 ggagatgattgagtatgaa-ccaagtgagtaaacactatgttgaatgaacttgatgcattggtctgactattattaattgtacattttctggaat 4517  T

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Target: scaffold1098 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1098
Description:

Target: scaffold1098; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 2294 - 2185
Alignment:
Q  80 tgattatgattaattgtgt-attttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatg 178  Q
    ||||||| ||||||||||| ||||||||||    ||| || ||||||||||  || ||| ||||||||||||||  |||||| ||||||||| |||||||    
T  2294 tgattataattaattgtgttattttctggagctattgaattaattatgatgatttgttgatgactgtgatgtatgcttatatctaaataaatcatacatg 2195  T
Q  179 ttgctgaatt 188  Q
    ||| ||||||    
T  2194 ttgttgaatt 2185  T

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Target: scaffold0395 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 7307 - 7372
Alignment:
Q  123 tatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 188  Q
    ||||||| ||| ||| || |||| ||||| ||||||||||||||||||||||||||||| ||||||    
T  7307 tatgatgaattgttgatggctgttatgtacatttatatttaaataaattatacatgttgttgaatt 7372  T

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Target: scaffold1290 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold1290
Description:

Target: scaffold1290; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 1081 - 1188
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    ||||||||||| |||||||||||||| ||||  ||||||  |||||||||   | ||| |||||||||||||| |||| | |||| ||||| ||||||||    
T  1081 tgattatgattgattgtgtattttcttgaattgttggattgattatgatgatctgttgatgactgtgatgtatgtttaca-ttaattaaatcatacatgt 1179  T
Q  180 tgctgaatt 188  Q
    || ||||||    
T  1180 tgttgaatt 1188  T

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Target: scaffold0249 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 7569 - 7661
Alignment:
Q  15 tggagatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgtgtattttctgg 107  Q
    ||||||||||||||||||||| |||||||| ||||| ||| ||||||||| || ||| || ||  | ||||| |||||||| |||| ||||||    
T  7569 tggagatgattgagtatgaaatcaagtgaatatatagtatgttgaatgaaattgatgtatgagcataattataattaattgggtatgttctgg 7661  T

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Target: scaffold0167 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 57 - 181
Target Start/End: Complemental strand, 20214 - 20090
Alignment:
Q  57 tgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatattt 156  Q
    |||||||| || ||| || ||| |||||||||||||||||| |||||||  |||  ||||||  |||||||||   | ||||||||||||||||||  ||    
T  20214 tgaatgaatttgatgtatgagtatgattatgattaattgtgcattttctaaaattgttggattgattatgatgatctgttgttgactgtgatgtatgctt 20115  T
Q  157 atatttaaataaattatacatgttg 181  Q
     ||||||| ||||| | ||||||||    
T  20114 ttatttaattaaatcaaacatgttg 20090  T

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Target: scaffold0021 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 146920 - 146812
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    ||||| |||| |||||| |||||||||||||  ||||||  | ||| |||  || ||| |||||||||||||| |||| |||||| ||||| ||||||||    
T  146920 tgattgtgatcaattgtatattttctggaattgttggatttactattatgatttgttgatgactgtgatgtatgtttacatttaattaaatcatacatgt 146821  T
Q  180 tgctgaatt 188  Q
    || ||||||    
T  146820 tgttgaatt 146812  T

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Target: scaffold0585 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 208
Target Start/End: Original strand, 8373 - 8440
Alignment:
Q  142 ctgtgatgtatatttatatttaaataaattatacatgttgct-gaattcttttcaaaggttgaagtat 208  Q
    |||| |||||||||||||||||||||||||||||| |||| |  ||||| ||||||||||||| ||||    
T  8373 ctgttatgtatatttatatttaaataaattatacaagttgttaaaattcatttcaaaggttgatgtat 8440  T

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Target: scaffold0235 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 15064 - 15131
Alignment:
Q  29 tatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgt 96  Q
    |||||||||||||||| ||||| ||| |||||||||||| ||| |||||| ||||| | |||||||||    
T  15064 tatgaaaccaagtgaaaatatattatgttgaatgaacttgatgtattagtatgattgttattaattgt 15131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 15751 - 15822
Alignment:
Q  25 tgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgt 96  Q
    |||||||||||||||||||| ||||| ||| ||||||||| || ||| |||||| ||||| | |||||||||    
T  15751 tgagtatgaaaccaagtgaaaatatattatgttgaatgaatttgatgtattagtatgattgttattaattgt 15822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 41401 - 41460
Alignment:
Q  25 tgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgatt 84  Q
    |||||||||||||||||||| ||||| ||| |||||||||||| ||| |||||| |||||    
T  41401 tgagtatgaaaccaagtgaaaatatattatgttgaatgaacttgatgtattagtatgatt 41460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 4106 - 4199
Alignment:
Q  16 ggagatgattgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaattgtgtattttctggaat 110  Q
    |||| |||||||||||||| ||||||||  ||| |||||  ||||||||||| ||||||| || ||| ||| |||||||||  ||||||||||||    
T  4106 ggaggtgattgagtatgaa-ccaagtgagtatacactatgctgaatgaacttgatgcattggtctgactattattaattgtacattttctggaat 4199  T

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Target: scaffold0790 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 181
Target Start/End: Complemental strand, 4847 - 4722
Alignment:
Q  57 tgaatgaactttatgcattagtttgattatgattaattgtgt-attttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatt 155  Q
    ||||||||||| ||| |  || |||||||| || |||||||| ||| ||||||    ||| |||||||||||||  || ||| ||||||||||||||  |    
T  4847 tgaatgaacttgatgtaagagcttgattataatcaattgtgttattctctggagctattgaatcaattatgatgatttgttgatgactgtgatgtatgct 4748  T
Q  156 tatatttaaataaattatacatgttg 181  Q
    ||||| ||||||||| ||||||||||    
T  4747 tatatctaaataaatcatacatgttg 4722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 870 - 939
Alignment:
Q  25 tgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaatt 94  Q
    |||||| ||||| ||||||| ||||||||| |||||||||||| ||| |||||| ||||| | |||||||    
T  870 tgagtacgaaactaagtgaaaatatactatgttgaatgaacttgatgtattagtatgattgttattaatt 939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 7806 - 7875
Alignment:
Q  25 tgagtatgaaaccaagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaatt 94  Q
    |||||| ||||| ||||||| ||||||||| |||||||||||| ||| |||||| ||||| | |||||||    
T  7806 tgagtacgaaactaagtgaaaatatactatgttgaatgaacttgatgtattagtatgattgttattaatt 7875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 1174 - 1282
Alignment:
Q  80 tgattatgattaattgtgtatttt-ctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatg 178  Q
    ||||||||||| |||||| ||||| |||||||  |||||| || |||| ||  || ||| |||||||||||||| |||||| |||| ||||| |||||||    
T  1174 tgattatgattgattgtgcatttttctggaattgttggattaactatgctgccttgttgatgactgtgatgtatgtttata-ttaattaaatcatacatg 1272  T
Q  179 ttgctgaatt 188  Q
    ||||| ||||    
T  1273 ttgcttaatt 1282  T

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Target: scaffold0860 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0860
Description:

Target: scaffold0860; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 176
Target Start/End: Complemental strand, 553 - 522
Alignment:
Q  145 tgatgtatatttatatttaaataaattataca 176  Q
    ||||||||||||||||||||||||||||||||    
T  553 tgatgtatatttatatttaaataaattataca 522  T

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Target: scaffold0609 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 176
Target Start/End: Complemental strand, 4757 - 4726
Alignment:
Q  145 tgatgtatatttatatttaaataaattataca 176  Q
    ||||||||||||||||||||||||||||||||    
T  4757 tgatgtatatttatatttaaataaattataca 4726  T

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Target: scaffold0556 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 176
Target Start/End: Complemental strand, 9941 - 9910
Alignment:
Q  145 tgatgtatatttatatttaaataaattataca 176  Q
    ||||||||||||||||||||||||||||||||    
T  9941 tgatgtatatttatatttaaataaattataca 9910  T

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Target: scaffold0156 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 25943 - 25833
Alignment:
Q  80 tgattatgattaattgtgtatttt-ctggaatctttggatc-aattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacat 177  Q
    |||||||||||||||||| ||||| || ||||  ||||||  ||||||  || | | ||||||||||||||||||  || ||||||| ||||| ||||||    
T  25943 tgattatgattaattgtgcatttttctagaattgttggattgaattatactgaactgttgttgactgtgatgtatgcttttatttaattaaatcatacat 25844  T
Q  178 gttgctgaatt 188  Q
    |||| ||||||    
T  25843 gttgttgaatt 25833  T

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Target: scaffold0005 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 188
Target Start/End: Original strand, 17996 - 18106
Alignment:
Q  79 ttgattatgattaattgtgt-attttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacat 177  Q
    |||||||| ||||||||| | ||||||||||    ||||| |||||||||||  ||  || |||||||||||||| ||||||| ||| ||||| |||| |    
T  17996 ttgattataattaattgtattattttctggagctgttggaccaattatgatgatttgctgatgactgtgatgtatgtttatatctaattaaatcatacgt 18095  T
Q  178 gttgctgaatt 188  Q
    |||| ||||||    
T  18096 gttgttgaatt 18106  T

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Target: scaffold0751 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 703 - 650
Alignment:
Q  135 ttgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 188  Q
    ||||||||||||||||||  || ||||||| ||||| |||||||||| ||||||    
T  703 ttgttgactgtgatgtatgcttttatttaattaaatcatacatgttgttgaatt 650  T

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Target: scaffold0108 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 177
Target Start/End: Complemental strand, 45882 - 45761
Alignment:
Q  57 tgaatgaactttatgcattagtttgattatgattaattgtgtatttt-ctggaatctttggatcaattatgatggattattgttgactgtgatgtatatt 155  Q
    ||||||||||||||| || ||   |||| |||| |||| |||||||| |||||||  |||||| || |||||||   | ||| |||||||||||||| ||    
T  45882 tgaatgaactttatgtatgagcacgattgtgatcaattatgtatttttctggaattattggattaactatgatgatctgttgatgactgtgatgtatgtt 45783  T
Q  156 tatatttaaataaattatacat 177  Q
    || |||||| ||||| ||||||    
T  45782 tacatttaattaaatcatacat 45761  T

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Target: scaffold0035 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 181
Target Start/End: Complemental strand, 918 - 817
Alignment:
Q  80 tgattatgattaattgtgtattttctggaatctttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgt 179  Q
    |||||||||||| ||||| ||||||| ||||  || |||  |||||||||   | ||||||||||||||||||  || ||||||| ||||| ||| ||||    
T  918 tgattatgattagttgtgcattttcttgaattattagattgattatgatgatctgttgttgactgtgatgtatgcttttatttaattaaatcatatatgt 819  T
Q  180 tg 181  Q
    ||    
T  818 tg 817  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 124791 - 124852
Alignment:
Q  120 aattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 181  Q
    ||||||||||  || ||| ||||||||||||||  |||||| ||||||||| ||||||||||    
T  124791 aattatgatgatttgttgatgactgtgatgtatgcttatatctaaataaatcatacatgttg 124852  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 188
Target Start/End: Original strand, 80966 - 81098
Alignment:
Q  57 tgaatgaactttatgcattagtttgattatgattaattgtgt-attttctggaatct-ttggatcaattatgatggattattgttgactgtgatgtatat 154  Q
    ||||||||||| ||| |  || ||||||||  |||||||||| |||||||| || || ||| || ||||||||||  || ||| ||||||||||||||      
T  80966 tgaatgaacttgatgaaggagcttgattatagttaattgtgttattttctg-aagctattgaattaattatgatgatttgttgatgactgtgatgtatgc 81064  T
Q  155 ttatatttaaataaattatacatgttgctgaatt 188  Q
    |||||| ||||||||| ||||| |||| ||||||    
T  81065 ttatatctaaataaatcatacacgttgttgaatt 81098  T

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Target: scaffold0178 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 25747 - 25687
Alignment:
Q  121 attatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 181  Q
    |||||||||  || ||| ||||||||||||||  |||||| ||||||||| ||||||||||    
T  25747 attatgatgatttgttgatgactgtgatgtatgcttatatctaaataaatcatacatgttg 25687  T

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Target: scaffold0124 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 43820 - 43876
Alignment:
Q  38 aagtgaacatatactatattgaatgaactttatgcattagtttgattatgattaatt 94  Q
    ||||||| ||||||||| |||||||||||| ||| |||||| ||||| | |||||||    
T  43820 aagtgaaaatatactatgttgaatgaacttgatgtattagtatgattgttattaatt 43876  T

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Target: scaffold0117 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 187
Target Start/End: Complemental strand, 33969 - 33929
Alignment:
Q  147 atgtatatttatatttaaataaattatacatgttgctgaat 187  Q
    ||||||| |||||||||||||||||||||| |||| |||||    
T  33969 atgtataattatatttaaataaattatacaagttgttgaat 33929  T

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Target: scaffold0049 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 188
Target Start/End: Original strand, 53513 - 53561
Alignment:
Q  140 gactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 188  Q
    ||||||||||||| ||||||| ||| ||||| |||||||||| ||||||    
T  53513 gactgtgatgtatgtttatatctaattaaatcatacatgttgttgaatt 53561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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