View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2089_low_11 (Length: 248)

Name: NF2089_low_11
Description: NF2089
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2089_low_11
NF2089_low_11
[»] chr7 (45 HSPs)
chr7 (90-167)||(24339641-24339719)
chr7 (101-205)||(11272531-11272637)
chr7 (90-142)||(25481901-25481953)
chr7 (97-144)||(26033467-26033514)
chr7 (90-144)||(28155569-28155623)
chr7 (97-144)||(5409842-5409889)
chr7 (90-145)||(13770690-13770745)
chr7 (98-144)||(3991331-3991377)
chr7 (90-144)||(7438705-7438759)
chr7 (90-144)||(11061082-11061136)
chr7 (99-144)||(9408340-9408385)
chr7 (91-144)||(9778500-9778553)
chr7 (97-144)||(18215192-18215239)
chr7 (97-144)||(21880158-21880205)
chr7 (97-144)||(43027475-43027522)
chr7 (98-144)||(11665446-11665492)
chr7 (99-144)||(18039006-18039052)
chr7 (90-144)||(24105677-24105731)
chr7 (98-144)||(27945048-27945094)
chr7 (90-148)||(43249992-43250050)
chr7 (91-144)||(19213803-19213856)
chr7 (91-144)||(19992001-19992054)
chr7 (90-135)||(29787384-29787429)
chr7 (98-142)||(7058433-7058477)
chr7 (90-134)||(32308119-32308163)
chr7 (98-141)||(8234153-8234196)
chr7 (109-144)||(21560521-21560556)
chr7 (90-137)||(23191895-23191942)
chr7 (98-144)||(32094026-32094073)
chr7 (97-135)||(2424620-2424658)
chr7 (90-144)||(7197303-7197357)
chr7 (98-140)||(11831439-11831481)
chr7 (98-136)||(13300417-13300455)
chr7 (90-144)||(20549790-20549844)
chr7 (90-144)||(26733303-26733357)
chr7 (98-191)||(35861971-35862055)
chr7 (94-135)||(11890934-11890975)
chr7 (97-142)||(30813818-30813863)
chr7 (169-206)||(38134335-38134372)
chr7 (91-124)||(42720916-42720949)
chr7 (99-144)||(2334256-2334303)
chr7 (109-141)||(13557750-13557782)
chr7 (91-144)||(21864806-21864861)
chr7 (90-134)||(30731036-30731080)
chr7 (100-144)||(40287363-40287406)
[»] chr5 (48 HSPs)
chr5 (91-167)||(39698541-39698618)
chr5 (90-144)||(21191062-21191116)
chr5 (92-144)||(21576751-21576803)
chr5 (98-144)||(6247629-6247675)
chr5 (90-144)||(14674268-14674322)
chr5 (90-167)||(19579700-19579778)
chr5 (90-144)||(31084322-31084376)
chr5 (90-144)||(42893359-42893413)
chr5 (90-142)||(43001799-43001851)
chr5 (90-144)||(7677704-7677758)
chr5 (90-144)||(13287405-13287459)
chr5 (90-167)||(21522749-21522827)
chr5 (90-167)||(21533315-21533393)
chr5 (99-144)||(24906307-24906352)
chr5 (90-165)||(3966502-3966578)
chr5 (91-135)||(6471904-6471948)
chr5 (90-169)||(37328824-37328904)
chr5 (97-144)||(7218273-7218320)
chr5 (97-144)||(8420033-8420080)
chr5 (98-191)||(21351865-21351957)
chr5 (98-167)||(21542037-21542107)
chr5 (98-144)||(30183556-30183602)
chr5 (98-144)||(33178032-33178078)
chr5 (90-144)||(41633734-41633788)
chr5 (99-148)||(5467980-5468029)
chr5 (98-143)||(15405062-15405107)
chr5 (92-144)||(17177029-17177081)
chr5 (90-138)||(27932234-27932282)
chr5 (98-142)||(4105264-4105310)
chr5 (109-144)||(15884006-15884041)
chr5 (90-144)||(2436921-2436975)
chr5 (97-143)||(6326304-6326350)
chr5 (98-144)||(10298576-10298622)
chr5 (90-144)||(28588680-28588734)
chr5 (90-144)||(15382476-15382532)
chr5 (99-148)||(25863212-25863261)
chr5 (99-167)||(30098334-30098403)
chr5 (99-148)||(31264446-31264495)
chr5 (90-135)||(39205879-39205924)
chr5 (98-135)||(40131628-40131665)
chr5 (91-144)||(41091263-41091316)
chr5 (92-145)||(131762-131817)
chr5 (92-148)||(7997168-7997224)
chr5 (90-126)||(26716143-26716179)
chr5 (90-126)||(26985883-26985919)
chr5 (92-144)||(30502394-30502446)
chr5 (92-144)||(30542737-30542789)
chr5 (172-208)||(35252256-35252292)
[»] chr6 (59 HSPs)
chr6 (90-165)||(16766696-16766772)
chr6 (91-144)||(28715295-28715348)
chr6 (90-165)||(9107354-9107430)
chr6 (90-144)||(7977836-7977890)
chr6 (98-144)||(8365525-8365571)
chr6 (98-144)||(10770680-10770726)
chr6 (98-144)||(34595141-34595187)
chr6 (90-143)||(12696323-12696376)
chr6 (92-191)||(21395268-21395365)
chr6 (98-143)||(31384927-31384972)
chr6 (90-141)||(17841598-17841649)
chr6 (97-144)||(31959165-31959212)
chr6 (90-144)||(1191706-1191760)
chr6 (98-144)||(1681765-1681811)
chr6 (90-167)||(5970090-5970168)
chr6 (98-144)||(7801162-7801208)
chr6 (98-144)||(9522898-9522944)
chr6 (98-144)||(16833315-16833361)
chr6 (87-140)||(25010212-25010265)
chr6 (98-142)||(8776981-8777025)
chr6 (97-144)||(28152105-28152151)
chr6 (90-144)||(426520-426574)
chr6 (98-144)||(853865-853911)
chr6 (98-148)||(2117083-2117133)
chr6 (90-144)||(7938115-7938169)
chr6 (99-144)||(403870-403915)
chr6 (91-144)||(6898287-6898340)
chr6 (91-144)||(9025500-9025553)
chr6 (92-144)||(9911534-9911587)
chr6 (90-143)||(17341671-17341724)
chr6 (97-142)||(17435205-17435250)
chr6 (90-135)||(19040351-19040396)
chr6 (92-144)||(7265599-7265651)
chr6 (90-144)||(3209380-3209435)
chr6 (99-142)||(4118341-4118384)
chr6 (90-144)||(4877941-4877996)
chr6 (99-191)||(7930313-7930405)
chr6 (90-167)||(8713978-8714057)
chr6 (90-133)||(10842531-10842574)
chr6 (100-135)||(16388248-16388283)
chr6 (90-144)||(24645479-24645534)
chr6 (91-142)||(32511674-32511725)
chr6 (90-144)||(32978905-32978960)
chr6 (90-144)||(9027177-9027231)
chr6 (98-144)||(15489738-15489784)
chr6 (98-143)||(17302563-17302609)
chr6 (90-144)||(26562688-26562742)
chr6 (90-124)||(33001315-33001349)
chr6 (97-138)||(2224232-2224273)
chr6 (99-144)||(6327524-6327569)
chr6 (98-135)||(7151419-7151456)
chr6 (90-135)||(7996393-7996438)
chr6 (90-135)||(8022363-8022408)
chr6 (90-135)||(9658878-9658923)
chr6 (98-135)||(34225824-34225861)
chr6 (91-148)||(34446565-34446622)
chr6 (92-133)||(13632013-13632056)
chr6 (92-144)||(30866150-30866202)
chr6 (99-135)||(31579240-31579276)
[»] chr4 (52 HSPs)
chr4 (92-144)||(29205445-29205497)
chr4 (90-144)||(21945502-21945556)
chr4 (90-144)||(23292992-23293046)
chr4 (97-143)||(28964255-28964301)
chr4 (90-143)||(3947773-3947826)
chr4 (97-142)||(11596360-11596405)
chr4 (91-148)||(37203264-37203321)
chr4 (98-142)||(19482675-19482719)
chr4 (98-144)||(54580029-54580075)
chr4 (99-144)||(6485617-6485662)
chr4 (90-143)||(38847019-38847072)
chr4 (97-144)||(12895122-12895169)
chr4 (90-144)||(30298945-30299000)
chr4 (90-144)||(30327813-30327868)
chr4 (97-144)||(47263992-47264039)
chr4 (90-144)||(49431024-49431079)
chr4 (91-142)||(51701258-51701309)
chr4 (90-144)||(2361981-2362035)
chr4 (90-144)||(8423724-8423778)
chr4 (90-148)||(11651136-11651194)
chr4 (98-144)||(12797344-12797389)
chr4 (90-148)||(24343506-24343564)
chr4 (90-142)||(715615-715668)
chr4 (90-142)||(752941-752994)
chr4 (98-191)||(4383375-4383470)
chr4 (99-144)||(12895280-12895325)
chr4 (91-135)||(15029765-15029809)
chr4 (90-148)||(20633484-20633539)
chr4 (98-142)||(40481644-40481687)
chr4 (97-167)||(847957-848028)
chr4 (109-144)||(2626021-2626056)
chr4 (90-149)||(14126112-14126171)
chr4 (98-137)||(14465088-14465127)
chr4 (92-135)||(15659775-15659818)
chr4 (99-142)||(27706185-27706228)
chr4 (109-144)||(42640547-42640582)
chr4 (172-206)||(15724483-15724517)
chr4 (101-135)||(18576052-18576086)
chr4 (90-148)||(22440602-22440660)
chr4 (98-144)||(24613707-24613753)
chr4 (90-143)||(28084520-28084574)
chr4 (98-144)||(35157991-35158037)
chr4 (90-144)||(40613449-40613503)
chr4 (99-144)||(16073403-16073447)
chr4 (87-144)||(30982884-30982941)
chr4 (90-135)||(32910550-32910595)
chr4 (98-135)||(36635331-36635368)
chr4 (99-135)||(903930-903966)
chr4 (99-135)||(6863161-6863197)
chr4 (90-134)||(38148741-38148785)
chr4 (99-135)||(40179651-40179687)
chr4 (91-135)||(56257933-56257977)
[»] chr3 (61 HSPs)
chr3 (90-144)||(49651792-49651846)
chr3 (91-144)||(26508110-26508163)
chr3 (90-142)||(4987299-4987351)
chr3 (97-144)||(28918007-28918054)
chr3 (98-167)||(14209120-14209190)
chr3 (90-144)||(34185129-34185183)
chr3 (90-148)||(35994740-35994797)
chr3 (91-144)||(1509539-1509592)
chr3 (91-144)||(21256992-21257045)
chr3 (91-144)||(51206359-51206412)
chr3 (94-142)||(25948895-25948943)
chr3 (98-191)||(34910324-34910421)
chr3 (90-144)||(7928449-7928503)
chr3 (98-144)||(10954959-10955005)
chr3 (90-144)||(21479117-21479171)
chr3 (98-144)||(41961656-41961702)
chr3 (98-144)||(55401082-55401128)
chr3 (90-143)||(10268493-10268546)
chr3 (91-148)||(34307782-34307839)
chr3 (90-142)||(3164033-3164085)
chr3 (90-134)||(14979180-14979224)
chr3 (100-144)||(20503474-20503518)
chr3 (92-143)||(11610522-11610573)
chr3 (97-167)||(14832105-14832176)
chr3 (98-144)||(750624-750670)
chr3 (90-144)||(4990973-4991027)
chr3 (90-144)||(8383256-8383310)
chr3 (102-144)||(8587027-8587069)
chr3 (90-144)||(8789556-8789610)
chr3 (98-167)||(14216899-14216969)
chr3 (98-167)||(14223028-14223098)
chr3 (90-144)||(15796300-15796354)
chr3 (90-148)||(24205043-24205101)
chr3 (99-144)||(25775516-25775562)
chr3 (90-144)||(27505245-27505299)
chr3 (98-144)||(28812522-28812568)
chr3 (98-135)||(18426956-18426993)
chr3 (97-140)||(26492215-26492258)
chr3 (90-125)||(40052331-40052366)
chr3 (91-144)||(8593136-8593190)
chr3 (97-135)||(11251984-11252022)
chr3 (90-139)||(14747560-14747610)
chr3 (90-144)||(14829689-14829742)
chr3 (98-144)||(16000022-16000068)
chr3 (98-144)||(17005625-17005671)
chr3 (98-144)||(29508451-29508497)
chr3 (90-144)||(55212962-55213016)
chr3 (90-135)||(11313815-11313860)
chr3 (87-148)||(12704659-12704720)
chr3 (90-135)||(23870574-23870619)
chr3 (98-135)||(24633773-24633810)
chr3 (90-135)||(25064908-25064953)
chr3 (99-148)||(25365470-25365519)
chr3 (92-167)||(1550141-1550217)
chr3 (99-135)||(4201404-4201440)
chr3 (110-142)||(7171520-7171552)
chr3 (100-144)||(8930836-8930880)
chr3 (91-135)||(9624641-9624685)
chr3 (91-135)||(10690277-10690321)
chr3 (91-135)||(15544693-15544737)
chr3 (91-135)||(27277853-27277897)
[»] chr2 (46 HSPs)
chr2 (90-144)||(30404856-30404910)
chr2 (90-142)||(38117167-38117219)
chr2 (97-144)||(30717536-30717583)
chr2 (91-144)||(2438725-2438778)
chr2 (90-143)||(21374706-21374759)
chr2 (90-169)||(37419742-37419822)
chr2 (90-144)||(20539680-20539734)
chr2 (90-144)||(37558976-37559030)
chr2 (91-144)||(11223869-11223922)
chr2 (90-135)||(28677908-28677953)
chr2 (90-143)||(39323263-39323316)
chr2 (98-144)||(19536403-19536450)
chr2 (98-144)||(974754-974800)
chr2 (99-133)||(5473336-5473370)
chr2 (98-144)||(12668429-12668475)
chr2 (98-144)||(12940941-12940987)
chr2 (98-144)||(15657871-15657917)
chr2 (98-144)||(18841019-18841065)
chr2 (99-144)||(15972881-15972926)
chr2 (99-144)||(18421971-18422016)
chr2 (90-135)||(21616761-21616806)
chr2 (90-135)||(21782833-21782878)
chr2 (98-143)||(33153431-33153476)
chr2 (97-168)||(4882677-4882749)
chr2 (90-142)||(24894388-24894440)
chr2 (90-144)||(14996229-14996284)
chr2 (97-144)||(5040738-5040787)
chr2 (90-144)||(6940254-6940308)
chr2 (98-144)||(20473329-20473375)
chr2 (99-144)||(23058448-23058494)
chr2 (90-144)||(23718025-23718079)
chr2 (90-144)||(24105697-24105751)
chr2 (98-144)||(26769518-26769564)
chr2 (98-144)||(30335424-30335470)
chr2 (90-144)||(34221503-34221557)
chr2 (98-144)||(36756350-36756396)
chr2 (90-144)||(37411250-37411304)
chr2 (90-144)||(42832282-42832336)
chr2 (90-147)||(10535762-10535819)
chr2 (90-135)||(18276520-18276565)
chr2 (90-143)||(21091722-21091775)
chr2 (90-135)||(31808076-31808121)
chr2 (90-135)||(36409642-36409687)
chr2 (91-144)||(44860320-44860373)
chr2 (92-144)||(18420440-18420492)
chr2 (99-135)||(28412358-28412394)
[»] scaffold0223 (1 HSPs)
scaffold0223 (90-143)||(20171-20224)
[»] chr8 (48 HSPs)
chr8 (91-167)||(21465412-21465489)
chr8 (91-144)||(25566841-25566894)
chr8 (100-191)||(17468460-17468558)
chr8 (98-167)||(2572038-2572108)
chr8 (98-144)||(4948659-4948705)
chr8 (90-167)||(22651975-22652053)
chr8 (90-147)||(41831943-41832000)
chr8 (90-208)||(13436908-13437024)
chr8 (97-144)||(8342978-8343025)
chr8 (97-143)||(8343322-8343368)
chr8 (90-144)||(18407718-18407772)
chr8 (90-144)||(29510310-29510364)
chr8 (97-143)||(30077394-30077440)
chr8 (99-144)||(20873077-20873122)
chr8 (91-144)||(40332191-40332244)
chr8 (90-142)||(22595993-22596045)
chr8 (98-142)||(36450762-36450806)
chr8 (92-143)||(22197749-22197800)
chr8 (90-141)||(30271300-30271351)
chr8 (90-144)||(4298892-4298946)
chr8 (98-144)||(15816135-15816181)
chr8 (90-144)||(24613520-24613573)
chr8 (90-167)||(28745497-28745575)
chr8 (98-167)||(29447092-29447162)
chr8 (90-144)||(34897084-34897138)
chr8 (90-148)||(41838125-41838183)
chr8 (90-148)||(44067515-44067573)
chr8 (97-135)||(3025557-3025595)
chr8 (90-140)||(4673435-4673485)
chr8 (90-144)||(5813591-5813645)
chr8 (92-142)||(7442846-7442896)
chr8 (90-144)||(11927092-11927146)
chr8 (90-144)||(13844602-13844656)
chr8 (98-144)||(20679401-20679447)
chr8 (90-144)||(25192353-25192407)
chr8 (90-124)||(27101514-27101548)
chr8 (90-144)||(31236583-31236637)
chr8 (90-140)||(31556996-31557045)
chr8 (90-135)||(4611533-4611578)
chr8 (87-144)||(12606835-12606892)
chr8 (98-135)||(14134706-14134743)
chr8 (90-135)||(24362217-24362262)
chr8 (99-144)||(24669441-24669486)
chr8 (91-140)||(28642408-28642457)
chr8 (90-135)||(36934669-36934714)
chr8 (90-135)||(39954294-39954339)
chr8 (91-135)||(14731712-14731756)
chr8 (92-124)||(35519833-35519865)
[»] scaffold0103 (1 HSPs)
scaffold0103 (90-142)||(51810-51862)
[»] chr1 (65 HSPs)
chr1 (90-142)||(113298-113350)
chr1 (98-144)||(24577192-24577238)
chr1 (90-191)||(35702557-35702648)
chr1 (90-144)||(38078667-38078721)
chr1 (91-144)||(1486715-1486768)
chr1 (91-144)||(22515893-22515946)
chr1 (99-144)||(40258939-40258984)
chr1 (99-167)||(47989505-47989574)
chr1 (100-144)||(18337338-18337382)
chr1 (92-144)||(31015044-31015096)
chr1 (98-144)||(1704998-1705044)
chr1 (99-168)||(6612152-6612222)
chr1 (98-144)||(18190114-18190160)
chr1 (90-144)||(21378577-21378631)
chr1 (98-144)||(22881622-22881668)
chr1 (90-140)||(31672905-31672955)
chr1 (98-144)||(42359455-42359501)
chr1 (90-144)||(46348389-46348443)
chr1 (90-135)||(398780-398825)
chr1 (92-144)||(48450593-48450645)
chr1 (98-144)||(51410031-51410078)
chr1 (90-148)||(3490392-3490450)
chr1 (98-144)||(10572595-10572641)
chr1 (90-144)||(19058862-19058916)
chr1 (98-144)||(28273094-28273140)
chr1 (90-144)||(36878460-36878514)
chr1 (90-144)||(41877476-41877530)
chr1 (99-144)||(1815265-1815310)
chr1 (90-135)||(5898281-5898326)
chr1 (90-142)||(13011223-13011276)
chr1 (90-143)||(14359529-14359581)
chr1 (90-144)||(18471297-18471353)
chr1 (90-135)||(23738677-23738722)
chr1 (98-143)||(32434723-32434768)
chr1 (92-144)||(9709821-9709873)
chr1 (90-134)||(12443476-12443520)
chr1 (92-148)||(22794080-22794136)
chr1 (97-165)||(31694694-31694765)
chr1 (98-142)||(32461471-32461515)
chr1 (91-135)||(40181871-40181915)
chr1 (92-143)||(5927347-5927398)
chr1 (91-144)||(17778549-17778599)
chr1 (101-167)||(25361896-25361963)
chr1 (101-167)||(44482240-44482307)
chr1 (90-144)||(1864886-1864940)
chr1 (90-144)||(5376506-5376560)
chr1 (97-144)||(5944287-5944336)
chr1 (98-140)||(6332678-6332719)
chr1 (90-144)||(9629906-9629960)
chr1 (97-135)||(16927200-16927238)
chr1 (90-132)||(17754310-17754352)
chr1 (90-140)||(18556466-18556516)
chr1 (98-144)||(37598839-37598884)
chr1 (90-131)||(2896140-2896181)
chr1 (98-135)||(7918226-7918263)
chr1 (97-142)||(11605943-11605988)
chr1 (90-135)||(19324561-19324606)
chr1 (90-135)||(25098570-25098615)
chr1 (97-142)||(27471574-27471619)
chr1 (90-143)||(29144365-29144418)
chr1 (98-135)||(34298443-34298480)
chr1 (98-134)||(9828051-9828087)
chr1 (99-143)||(15323171-15323215)
chr1 (90-138)||(16297295-16297343)
chr1 (90-165)||(17831518-17831591)
[»] scaffold0652 (1 HSPs)
scaffold0652 (90-144)||(468-522)
[»] scaffold0136 (1 HSPs)
scaffold0136 (90-167)||(3831-3909)
[»] scaffold0361 (1 HSPs)
scaffold0361 (98-141)||(14537-14580)
[»] scaffold0066 (1 HSPs)
scaffold0066 (90-148)||(33366-33423)
[»] scaffold0027 (1 HSPs)
scaffold0027 (90-144)||(46681-46735)
[»] scaffold0021 (1 HSPs)
scaffold0021 (90-144)||(130481-130535)
[»] scaffold0011 (1 HSPs)
scaffold0011 (98-144)||(17755-17801)
[»] scaffold0018 (2 HSPs)
scaffold0018 (90-143)||(192256-192309)
scaffold0018 (98-143)||(178825-178871)
[»] scaffold0004 (2 HSPs)
scaffold0004 (90-143)||(92806-92859)
scaffold0004 (92-144)||(123626-123681)
[»] scaffold0450 (1 HSPs)
scaffold0450 (98-168)||(8616-8687)
[»] scaffold0053 (1 HSPs)
scaffold0053 (90-144)||(8797-8851)
[»] scaffold0050 (1 HSPs)
scaffold0050 (90-144)||(70277-70331)
[»] scaffold0025 (1 HSPs)
scaffold0025 (99-144)||(23777-23823)
[»] scaffold0020 (1 HSPs)
scaffold0020 (90-144)||(135318-135372)
[»] scaffold0793 (1 HSPs)
scaffold0793 (90-142)||(4891-4944)
[»] scaffold0722 (1 HSPs)
scaffold0722 (90-142)||(7040-7092)
[»] scaffold0246 (1 HSPs)
scaffold0246 (98-142)||(19583-19626)
[»] scaffold0049 (1 HSPs)
scaffold0049 (92-144)||(63774-63826)
[»] scaffold0044 (1 HSPs)
scaffold0044 (100-144)||(53189-53233)
[»] scaffold0008 (1 HSPs)
scaffold0008 (92-167)||(263354-263430)
[»] scaffold0019 (1 HSPs)
scaffold0019 (90-165)||(71722-71800)
[»] scaffold1528 (1 HSPs)
scaffold1528 (90-132)||(1034-1076)
[»] scaffold0306 (1 HSPs)
scaffold0306 (98-144)||(13407-13453)
[»] scaffold0152 (1 HSPs)
scaffold0152 (98-144)||(21874-21920)
[»] scaffold0003 (1 HSPs)
scaffold0003 (90-144)||(241593-241647)
[»] scaffold0236 (1 HSPs)
scaffold0236 (91-144)||(25774-25827)
[»] scaffold0168 (1 HSPs)
scaffold0168 (91-144)||(21043-21096)
[»] scaffold0123 (1 HSPs)
scaffold0123 (91-144)||(44531-44584)
[»] scaffold0227 (1 HSPs)
scaffold0227 (98-142)||(7319-7363)
[»] scaffold0171 (1 HSPs)
scaffold0171 (109-168)||(23529-23589)


Alignment Details
Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 90 - 167
Target Start/End: Original strand, 24339641 - 24339719
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 167  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||  ||| |||||||||||||    
T  24339641 cgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacga 24339719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 205
Target Start/End: Complemental strand, 11272637 - 11272531
Alignment:
Q  101 ataatttgaaaaaatcacata--attcggtgtaattacaagtgtcg-tgtctagtcagtgtcggacacgatgggacacgcctaatccgaggagtttatgt 197  Q
    |||||||||||||||||||||  |||| |||||||||||||||||| ||||  ||| ||||||||||||  ||||||||||||||||||||||| | |||    
T  11272637 ataatttgaaaaaatcacatataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgc-gggacacgcctaatccgaggagtatctgt 11272539  T
Q  198 tcttcata 205  Q
     |||||||    
T  11272538 gcttcata 11272531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 25481901 - 25481953
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 142  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  25481901 cgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 25481953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 26033514 - 26033467
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26033514 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 26033467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 28155569 - 28155623
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  28155569 cgacaccgctaataatttgagaaaattacataattcggtgtaattacaagtgtcg 28155623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 5409889 - 5409842
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  5409889 gctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcg 5409842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 13770690 - 13770745
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgt 145  Q
    |||||| ||||||||||| ||||||| ||||||||| |||||||||||||||||||    
T  13770690 cgacacagctaataatttaaaaaaattacataattcagtgtaattacaagtgtcgt 13770745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 3991331 - 3991377
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||||||||||||| || |||||||||||||||    
T  3991331 ctaataatttgaaaaaatcacataattcagtataattacaagtgtcg 3991377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 7438705 - 7438759
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| | |||||||||||||||||||||||||||  |||||||||||||||||    
T  7438705 cgacacagttaataatttgaaaaaatcacataattcaatgtaattacaagtgtcg 7438759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 11061136 - 11061082
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||||||||||||||||||  || |||||||||||||||    
T  11061136 cgacacagctaataatttgaaaaaatcacataatttagtataattacaagtgtcg 11061082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 9408385 - 9408340
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||    
T  9408385 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 9408340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 9778500 - 9778553
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||| ||| ||||||||||||||||||||||||| || |||||||||||||||    
T  9778500 gacacagctgataatttgaaaaaatcacataattcagtataattacaagtgtcg 9778553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 18215239 - 18215192
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||||||||||||||| | ||||| ||||||||||||    
T  18215239 gctaataatttgaaaaaatcacataatgcagtgtagttacaagtgtcg 18215192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 21880158 - 21880205
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||| ||||| ||||||||| ||||||||||||||||||    
T  21880158 gctaataatttgagaaaattacataattcagtgtaattacaagtgtcg 21880205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 43027522 - 43027475
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||||||||||||||| | |||||| |||||||||||    
T  43027522 gctaataatttgaaaaaatcacataatgcagtgtaaatacaagtgtcg 43027475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 11665492 - 11665446
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||||||||||||| || |||||| ||||||||    
T  11665492 ctaataatttgaaaaaatcacataattcagtctaattataagtgtcg 11665446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 18039006 - 18039052
Alignment:
Q  99 taataatttgaaaa-aatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||    
T  18039006 taataatttgaaaaaaatcacataattcagtgtaattacaagtgtcg 18039052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 24105677 - 24105731
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| |||||||||||||||||||  ||| |||| ||||||||||||||||||    
T  24105677 cgacacagctaataatttgaaaaaattgcatgattcagtgtaattacaagtgtcg 24105731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 27945048 - 27945094
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||||||    
T  27945048 ctaataatttgagaaaattacataattcagtgtaattacaagtgtcg 27945094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 43249992 - 43250050
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 148  Q
    |||||||| ||||||||||| ||||| ||||||| | ||||||||| ||||||||||||    
T  43249992 cgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtc 43250050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 19213803 - 19213856
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||| ||||||||||| ||||||||||||||| | |||||| |||||||||||    
T  19213803 gacactgctaataattttaaaaaatcacataatgcagtgtaaatacaagtgtcg 19213856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 19992001 - 19992054
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||| ||||||||||||| ||||||||||| ||| ||||||||| ||||||||    
T  19992001 gacacagctaataatttgagaaaatcacatatttcagtgtaattataagtgtcg 19992054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 29787429 - 29787384
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||| ||||||||||||| ||||||||||||||| |||||||||    
T  29787429 cgacaccgctaataatttgagaaaatcacataattcagtgtaatta 29787384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 7058433 - 7058477
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 142  Q
    ||||||||||||||||||||  |||||| ||||||||||||||||    
T  7058433 ctaataatttgaaaaaatcatgtaattcagtgtaattacaagtgt 7058477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 134
Target Start/End: Original strand, 32308119 - 32308163
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaatt 134  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||    
T  32308119 cgacaccgctaataatttgagaaaatcacataattcagtgtaatt 32308163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 8234153 - 8234196
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtg 141  Q
    |||||||||||||||||| ||||||||| ||||| |||||||||    
T  8234153 ctaataatttgaaaaaataacataattcagtgtagttacaagtg 8234196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 144
Target Start/End: Original strand, 21560521 - 21560556
Alignment:
Q  109 aaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||||| ||||||||||||||||||    
T  21560521 aaaaaatcacataattcagtgtaattacaagtgtcg 21560556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 137
Target Start/End: Original strand, 23191895 - 23191942
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattaca 137  Q
    |||||| ||||||||||||| ||||||||||| ||| |||||||||||    
T  23191895 cgacaccgctaataatttgagaaaatcacatatttcagtgtaattaca 23191942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 32094073 - 32094026
Alignment:
Q  98 ctaataatttgaaaaaa-tcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||||| ||||||||||| |||||||||||| |||||    
T  32094073 ctaataatttgaaaaaaatcacataattcagtgtaattacaaatgtcg 32094026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 135
Target Start/End: Original strand, 2424620 - 2424658
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  2424620 gctaataatttgagaaaatcacataattcagtgtaatta 2424658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 7197357 - 7197303
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||| |||||||||  ||||||  |||||||||||||||||    
T  7197357 cgacacagctaataatttaaaaaaatcatttaattcaatgtaattacaagtgtcg 7197303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 140
Target Start/End: Original strand, 11831439 - 11831481
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagt 140  Q
    |||||||||||||||||||| ||||||  ||||||||||||||    
T  11831439 ctaataatttgaaaaaatcatataatttagtgtaattacaagt 11831481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 136
Target Start/End: Original strand, 13300417 - 13300455
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattac 136  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  13300417 ctaataatttgaaaaaatcatataattcagtgtaattac 13300455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 20549790 - 20549844
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||| |||||||| |||||| ||||||||| | ||||||    
T  20549790 cgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcg 20549844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 26733303 - 26733357
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||| ||||||||||||||| || |||||| | ||||||    
T  26733303 cgacaccgctaataatttgacaaaatcacataattcagtctaattaaatgtgtcg 26733357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 35861971 - 35862055
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacgatgggacacgcctaatccgaggagt 191  Q
    ||||||||||||||||||||||||||||  |||||||  ||||||| |||||        |||||||||||  ||||||||||||||||||||||    
T  35861971 ctaataatttgaaaaaatcacataattcaatgtaattgtaagtgtctgtgtc--------gtcggacacga--ggacacgcctaatccgaggagt 35862055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 11890975 - 11890934
Alignment:
Q  94 acggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||| ||||||||||||||||||| ||||||| |||||||||    
T  11890975 acggttaataatttgaaaaaatcatataattcagtgtaatta 11890934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 30813818 - 30813863
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 142  Q
    ||||||||||||| ||||| ||||||||| ||||||||||| ||||    
T  30813818 gctaataatttgagaaaattacataattcagtgtaattacaggtgt 30813863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 206
Target Start/End: Complemental strand, 38134372 - 38134335
Alignment:
Q  169 gggacacgcctaatccgaggagtttatgttcttcatag 206  Q
    ||||||||||||||||||||||| ||||| ||||||||    
T  38134372 gggacacgcctaatccgaggagtgtatgtgcttcatag 38134335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 124
Target Start/End: Complemental strand, 42720949 - 42720916
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataatt 124  Q
    ||||| ||||||||||||||||||||||||||||    
T  42720949 gacaccgctaataatttgaaaaaatcacataatt 42720916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 2334256 - 2334303
Alignment:
Q  99 taataatttgaaaa--aatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||  ||||||||||||  ||||||||||||||||||    
T  2334256 taataatttgaaaaaaaatcacataatttagtgtaattacaagtgtcg 2334303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 141
Target Start/End: Complemental strand, 13557782 - 13557750
Alignment:
Q  109 aaaaaatcacataattcggtgtaattacaagtg 141  Q
    ||||||||||||||||| |||||||||||||||    
T  13557782 aaaaaatcacataattcagtgtaattacaagtg 13557750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 21864806 - 21864861
Alignment:
Q  91 gacacggctaataatttgaaaaaa--tcacataattcggtgtaattacaagtgtcg 144  Q
    ||||| ||||||||||||||||||  ||| ||||||  ||||||||||||||||||    
T  21864806 gacacagctaataatttgaaaaaaaatcatataatttagtgtaattacaagtgtcg 21864861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 134
Target Start/End: Original strand, 30731036 - 30731080
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaatt 134  Q
    |||||| || |||||||||| ||||||||||||||| ||||||||    
T  30731036 cgacaccgcgaataatttgagaaaatcacataattcagtgtaatt 30731080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 40287406 - 40287363
Alignment:
Q  100 aataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||| ||| ||| ||||||||||||||||||    
T  40287406 aataatttgaaaaaatcatata-ttcagtgtaattacaagtgtcg 40287363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 91 - 167
Target Start/End: Original strand, 39698541 - 39698618
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 167  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||  ||| |||||||||||||    
T  39698541 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacga 39698618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 21191116 - 21191062
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21191116 cgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 21191062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 21576803 - 21576751
Alignment:
Q  92 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21576803 acacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 21576751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 6247629 - 6247675
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  6247629 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 6247675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 14674268 - 14674322
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||||||||||||||||||  ||||||||||||||||||    
T  14674268 cgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 14674322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 167
Target Start/End: Original strand, 19579700 - 19579778
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 167  Q
    |||||| ||||||||||||| ||||||||||||||  ||| ||||||||||||| |||||  |||||||||||||||||    
T  19579700 cgacacagctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtcgtgtcagtgtcggacacga 19579778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 31084322 - 31084376
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| |||||||||||||||||||||||||||||  |||||||||||||||||    
T  31084322 cgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcg 31084376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 42893359 - 42893413
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||||||||||||||||| | ||||||||||||||||||    
T  42893359 cgacacagctaataatttgaaaaaatcacataatccagtgtaattacaagtgtcg 42893413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 43001799 - 43001851
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 142  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  43001799 cgacactgctaataatttgaaaaaattacataattcagtgtaattacaagtgt 43001851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 7677704 - 7677758
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||||||||||||||||||| ||| ||||| ||||||||    
T  7677704 cgacacagctaataatttgaaaaaatcacataattcagtgcaattagaagtgtcg 7677758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 13287459 - 13287405
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| | ||||||||||||||||||||||||||| |||||| |||||||||||    
T  13287459 cgacacagataataatttgaaaaaatcacataattcagtgtaactacaagtgtcg 13287405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 167
Target Start/End: Original strand, 21522749 - 21522827
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 167  Q
    |||||| ||||||||||| ||||||| ||||||||| |||||||||||| |||| |||||  ||| |||||||||||||    
T  21522749 cgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacga 21522827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 167
Target Start/End: Original strand, 21533315 - 21533393
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 167  Q
    |||||| ||||||||||| ||||||| ||||||||| |||||||||||| |||| |||||  ||| |||||||||||||    
T  21533315 cgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacga 21533393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 24906352 - 24906307
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||    
T  24906352 taataatttgaaaaaatgacataattcagtgtaattacaagtgtcg 24906307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 165
Target Start/End: Original strand, 3966502 - 3966578
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacac 165  Q
    |||||| ||||||||||||| ||||||||| ||||| ||||||||| | ||||| |||||  |||||||||||||||    
T  3966502 cgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacac 3966578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 6471948 - 6471904
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||    
T  6471948 gacacggctaataatttgagaaaatcacataattcagtgtaatta 6471904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 169
Target Start/End: Complemental strand, 37328904 - 37328824
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacgatg 169  Q
    |||||| || ||||||||| |||||||||| ||||| ||||||||||| ||||| |||||  ||| |||||||||||||||    
T  37328904 cgacacagcaaataatttgtaaaaatcacaaaattcagtgtaattacatgtgtcggtgtcgtgtcggtgtcggacacgatg 37328824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 7218320 - 7218273
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||| || |||||||||||||| ||||||||||||||||||    
T  7218320 gctaataatttaaataaatcacataattcagtgtaattacaagtgtcg 7218273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 8420033 - 8420080
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||||    
T  8420033 gctaataatttgaaaaaataacataattcaatgtaattacaagtgtcg 8420080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 191
Target Start/End: Complemental strand, 21351957 - 21351865
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacgatgggacacgcctaatccgaggagt 191  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||| |||||  ||| ||||| |||||  ||| ||||| ||||||||| ||||    
T  21351957 ctaataattggaaaaagtcacataattcagtgtaattacaagtgtcggtgtcatgtcggtgtccgacac--tggaacacgtctaatccgaagagt 21351865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 21542037 - 21542107
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 167  Q
    |||||||||| |||| || ||||||||| ||||||||||||||||| |||||  ||| |||||||||||||    
T  21542037 ctaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacga 21542107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 30183556 - 30183602
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||| ||||||| ||||||| |||||||||||||||    
T  30183556 ctaataatttgaaaatatcacattattcggtttaattacaagtgtcg 30183602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 33178032 - 33178078
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||||    
T  33178032 ctaataatttaaaaaaatcacataatttagtgtaattacaagtgtcg 33178078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 41633734 - 41633788
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||||||| | ||||||||| |||||||||||| |||||    
T  41633734 cgacacagctaataatttgaaaaatttacataattcagtgtaattacaaatgtcg 41633788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 5468029 - 5467980
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 148  Q
    ||||||||||| ||||||||||||||| ||||||||| | ||||||||||    
T  5468029 taataatttgataaaatcacataattcagtgtaattataggtgtcgtgtc 5467980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 15405107 - 15405062
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 143  Q
    |||||||||||||||||||| |||||||  ||||||||||||||||    
T  15405107 ctaataatttgaaaaaatcatataattcaatgtaattacaagtgtc 15405062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 17177081 - 17177029
Alignment:
Q  92 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||| ||||||||||||||||||||| | |||||  |||||||||||||||||    
T  17177081 acacagctaataatttgaaaaaatcaaaaaattcattgtaattacaagtgtcg 17177029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 27932234 - 27932282
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaa 138  Q
    |||||| ||||||||||||| ||||| ||||||||| ||||||||||||    
T  27932234 cgacaccgctaataatttgagaaaattacataattcagtgtaattacaa 27932282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 4105264 - 4105310
Alignment:
Q  98 ctaataatttgaaaaaa--tcacataattcggtgtaattacaagtgt 142  Q
    |||||||||||||||||  ||||||||||| ||||||||||||||||    
T  4105264 ctaataatttgaaaaaagatcacataattcagtgtaattacaagtgt 4105310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 144
Target Start/End: Original strand, 15884006 - 15884041
Alignment:
Q  109 aaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||||| ||||||||||||||||||    
T  15884006 aaaaaatcacataattcagtgtaattacaagtgtcg 15884041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 2436921 - 2436975
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| |||||||||||| ||||||||||||||||| ||| |||| | ||||||    
T  2436921 cgacaccgctaataatttgcaaaaatcacataattcgttgtgattatatgtgtcg 2436975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 143
Target Start/End: Complemental strand, 6326350 - 6326304
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 143  Q
    |||| |||||||| ||||| ||||||||| |||||||||||||||||    
T  6326350 gctagtaatttgagaaaattacataattcagtgtaattacaagtgtc 6326304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 10298576 - 10298622
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||| ||||||||| |  |||||||||||||||||    
T  10298576 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 10298622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 28588734 - 28588680
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| | ||||||||||| ||||||||||||||| ||||||||| | ||||||    
T  28588734 cgacaccggtaataatttgagaaaatcacataattcagtgtaattataggtgtcg 28588680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 15382476 - 15382532
Alignment:
Q  90 cgacacggctaataatttgaaaaaa--tcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||||||||  ||| ||||||| || |||||||||||||||    
T  15382476 cgacacagctaataatttgaaaaaaaatcatataattcagtataattacaagtgtcg 15382532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 25863212 - 25863261
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 148  Q
    ||||||||||| ||||| | ||||||| ||||||||| ||||||||||||    
T  25863212 taataatttgagaaaatgatataattcagtgtaattataagtgtcgtgtc 25863261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 167
Target Start/End: Original strand, 30098334 - 30098403
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 167  Q
    ||||||||||| |||||||||||||||  |||||||| |  |||| || || ||||||||||||||||||    
T  30098334 taataatttgagaaaatcacataattcaatgtaattatagatgtcggtatcgagtcagtgtcggacacga 30098403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 31264446 - 31264495
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 148  Q
    ||||||||||| ||||| ||||||||| ||||||| | ||||||||||||    
T  31264446 taataatttgagaaaatgacataattcagtgtaatcataagtgtcgtgtc 31264495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 39205879 - 39205924
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||| ||||||||||||| ||||||| |||||| ||||||||||    
T  39205879 cgacactgctaataatttgagaaaatcatataattaggtgtaatta 39205924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 40131628 - 40131665
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||||||||||||||||||||||||| || ||||||    
T  40131628 ctaataatttgaaaaaatcacataattcagtttaatta 40131665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 41091316 - 41091263
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||| |||||| |||||| ||||||||||||||| ||||||||| | ||||||    
T  41091316 gacactgctaatgatttgagaaaatcacataattcagtgtaattatatgtgtcg 41091263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 145
Target Start/End: Original strand, 131762 - 131817
Alignment:
Q  92 acacggctaataatttgaaaaaatcac--ataattcggtgtaattacaagtgtcgt 145  Q
    |||| ||||||||||||||||||||||  ||||||  ||||||||||||| |||||    
T  131762 acacagctaataatttgaaaaaatcacatataattaagtgtaattacaagcgtcgt 131817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 7997224 - 7997168
Alignment:
Q  92 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 148  Q
    |||||| ||||||||||| ||||| | ||||| | ||||||||| ||||||||||||    
T  7997224 acacggataataatttgagaaaatgatataatacagtgtaattataagtgtcgtgtc 7997168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 26716143 - 26716179
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcg 126  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  26716143 cgacactgctaataatttgagaaaatcacataattcg 26716179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 26985883 - 26985919
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcg 126  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  26985883 cgacactgctaataatttgagaaaatcacataattcg 26985919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 30502446 - 30502394
Alignment:
Q  92 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||| ||||||||||||| |||||||| |||||| ||||||||| | ||||||    
T  30502446 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcg 30502394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 30542789 - 30542737
Alignment:
Q  92 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||| ||||||||||||| |||||||| |||||| ||||||||| | ||||||    
T  30542789 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcg 30542737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 35252292 - 35252256
Alignment:
Q  172 acacgcctaatccgaggagtttatgttcttcatagat 208  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  35252292 acacgcctaatccgaggagtatatgtgcttcatagat 35252256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 4e-19; HSPs: 59)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 165
Target Start/End: Original strand, 16766696 - 16766772
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacac 165  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||  ||| |||||||||||    
T  16766696 cgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacac 16766772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 28715295 - 28715348
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  28715295 gacacggctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcg 28715348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 165
Target Start/End: Complemental strand, 9107430 - 9107354
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacac 165  Q
    |||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| |||||  ||| |||||||||||    
T  9107430 cgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacac 9107354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 7977890 - 7977836
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  7977890 cgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcg 7977836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 8365571 - 8365525
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  8365571 ctaataatttgaaaatatcacataattcggtgtaattacaagtgtcg 8365525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 10770726 - 10770680
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  10770726 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 10770680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 34595141 - 34595187
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  34595141 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 34595187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 12696323 - 12696376
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 143  Q
    |||||| ||||||||||||||||||| ||||||||| |||||||||||||||||    
T  12696323 cgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtc 12696376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 191
Target Start/End: Complemental strand, 21395365 - 21395268
Alignment:
Q  92 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacgatgggacacgcctaatccgaggag 190  Q
    |||| ||||||||||||| ||||| ||||||||  ||||||||||||||||| |||||  ||||||||||||||| |  ||||||||||||||| |||||    
T  21395365 acaccgctaataatttgagaaaat-acataatttagtgtaattacaagtgtcggtgtcgtgtcagtgtcggacacca--ggacacgcctaatccaaggag 21395269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 143
Target Start/End: Original strand, 31384927 - 31384972
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 143  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  31384927 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtc 31384972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 141
Target Start/End: Complemental strand, 17841649 - 17841598
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtg 141  Q
    |||||| ||||||||||||||||||||||||||||  |||||||||||||||    
T  17841649 cgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtg 17841598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 31959165 - 31959212
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||    
T  31959165 gctaataatttgaaaaaatcacataatgcagtgtaattacaagtgtcg 31959212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 1191760 - 1191706
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  1191760 cgacacagctaataatttgaaaaattcacaaaattcagtgtaattacaagtgtcg 1191706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 1681765 - 1681811
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  1681765 ctaataatttgaaaaaatcacgtaattcagtgtaattacaagtgtcg 1681811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 167
Target Start/End: Complemental strand, 5970168 - 5970090
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgt-cgtgtctagtcagtgtcggacacga 167  Q
    |||||| | ||||||||||||||||||||||||||| |||||||||||| |||  |||||  ||| |||||||||||||    
T  5970168 cgacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacga 5970090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 7801208 - 7801162
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||    
T  7801208 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcg 7801162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 9522898 - 9522944
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||    
T  9522898 ctaataatttaaaaaaatcacataattcagtgtaattacaagtgtcg 9522944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 16833315 - 16833361
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  16833315 ctaataatttgaaaaaatcacatacttcagtgtaattacaagtgtcg 16833361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 25010265 - 25010212
Alignment:
Q  87 acacgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagt 140  Q
    ||||||||| ||||||||||||||||||||||||||||| | || |||||||||    
T  25010265 acacgacacagctaataatttgaaaaaatcacataattcagcgttattacaagt 25010212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 8777025 - 8776981
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 142  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||    
T  8777025 ctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgt 8776981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 28152105 - 28152151
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||    
T  28152105 gctaataatttgaaaa-atcacataattcagtgtaattacaagtgtcg 28152151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 426574 - 426520
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| | ||||||||||||||||||||||||||   |||||||||||||||||    
T  426574 cgacacagttaataatttgaaaaaatcacataattaaatgtaattacaagtgtcg 426520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 853911 - 853865
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||||||||||||  ||| ||||||||||||||    
T  853911 ctaataatttgaaaaaatcacataattaagtgcaattacaagtgtcg 853865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 148
Target Start/End: Original strand, 2117083 - 2117133
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 148  Q
    ||||||||||||||||||||||||||||  || ||||| ||||||||||||    
T  2117083 ctaataatttgaaaaaatcacataattcaatgcaattataagtgtcgtgtc 2117133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 7938115 - 7938169
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||||||||||| ||||||  ||||||||| ||||||||    
T  7938115 cgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcg 7938169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 403915 - 403870
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||||||||||||||  |||||| |||||||||||    
T  403915 taataatttgaaaaaatcacataatttagtgtaactacaagtgtcg 403870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 6898340 - 6898287
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||| |||| ||||||||  ||||||||||||||||||    
T  6898340 gacacgtctaataatttgaacaaattacataattaagtgtaattacaagtgtcg 6898287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 9025553 - 9025500
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||| ||||||||||||| ||||||||||||||| ||||||||| | ||||||    
T  9025553 gacactgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcg 9025500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 9911587 - 9911534
Alignment:
Q  92 acacggctaataatttgaaa-aaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||| ||||||||||| ||| |||||||||||||| ||||||||||||||||||    
T  9911587 acacagctaataatttaaaagaaatcacataattcagtgtaattacaagtgtcg 9911534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 17341724 - 17341671
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 143  Q
    |||||| | ||||||||||| ||||||||||||||| ||||||||| |||||||    
T  17341724 cgacaccgttaataatttgataaaatcacataattcagtgtaattataagtgtc 17341671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 17435205 - 17435250
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 142  Q
    ||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  17435205 gctaataattttaaaaaattacataattcagtgtaattacaagtgt 17435250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 19040351 - 19040396
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||| ||||||||||||| ||||||||||||||| |||||||||    
T  19040351 cgacaccgctaataatttgagaaaatcacataattcagtgtaatta 19040396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 7265651 - 7265599
Alignment:
Q  92 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||| ||||||||||||| ||||||||||||||| ||||||||| | ||||||    
T  7265651 acaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcg 7265599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 3209380 - 3209435
Alignment:
Q  90 cgacacggctaataatttgaaaa-aatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| |||||||||||||||| ||||||||||||  |||| |||||||||||||    
T  3209380 cgacacagctaataatttgaaaaaaatcacataatttagtgttattacaagtgtcg 3209435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 142
Target Start/End: Complemental strand, 4118384 - 4118341
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaattacaagtgt 142  Q
    ||||||||||||||||||||||||||   |||||||||||||||    
T  4118384 taataatttgaaaaaatcacataattaaatgtaattacaagtgt 4118341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 4877941 - 4877996
Alignment:
Q  90 cgacacggctaataatttgaaaaaa-tcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| |||||||||||||||||| ||||||||||  || |||||||||||||||    
T  4877941 cgacacagctaataatttgaaaaaagtcacataattaagtataattacaagtgtcg 4877996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 7930313 - 7930405
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcg-tgtctagtca-gtgtcggacacgatgggacacgcctaatccgaggagt 191  Q
    ||||||||||||||||||||||||||  ||| |||| ||||||||| ||||  |||| ||||| ||||| |  ||||||||||||| ||||||||    
T  7930313 taataatttgaaaaaatcacataatttagtgaaatttcaagtgtcggtgtcgtgtcacgtgtccgacacca--ggacacgcctaattcgaggagt 7930405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 167
Target Start/End: Original strand, 8713978 - 8714057
Alignment:
Q  90 cgacacggctaataatttgaaaa-aatcacataattcggtgtaattacaagtgt-cgtgtctagtcagtgtcggacacga 167  Q
    |||||| | |||||||||||||| ||||||||||||| |||||||||||| |||  |||||  ||| |||||||||||||    
T  8713978 cgacacagttaataatttgaaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacga 8714057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 133
Target Start/End: Original strand, 10842531 - 10842574
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaat 133  Q
    |||||| ||||||||||||||||||||||||||||  |||||||    
T  10842531 cgacaccgctaataatttgaaaaaatcacataatttagtgtaat 10842574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 135
Target Start/End: Complemental strand, 16388283 - 16388248
Alignment:
Q  100 aataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||||||||||||||||||||||| |||||||||    
T  16388283 aataatttgaaaaaatcacataattcagtgtaatta 16388248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 24645479 - 24645534
Alignment:
Q  90 cgacacggctaataatttgaaaa-aatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| |||||||||||||||| ||||||||||||| || || ||||||||||||    
T  24645479 cgacacagctaataatttgaaaaaaatcacataattcagtatagttacaagtgtcg 24645534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 32511725 - 32511674
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 142  Q
    ||||| ||||||||||| | ||||||||||||||| ||||||||| ||||||    
T  32511725 gacaccgctaataatttaagaaaatcacataattcagtgtaattataagtgt 32511674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 32978960 - 32978905
Alignment:
Q  90 cgacacggctaataatttgaaaaaat-cacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||||||||  |||||||||  ||||||||||||||||||    
T  32978960 cgacacagctaataatttgaaaaaaaacacataattaagtgtaattacaagtgtcg 32978905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 9027177 - 9027231
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||| | ||||||||||||| ||||||||| | ||||||    
T  9027177 cgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcg 9027231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 15489784 - 15489738
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||| ||| |||||  |||||||||||||||||    
T  15489784 ctaataatttgaaaaaattacacaattcaatgtaattacaagtgtcg 15489738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 143
Target Start/End: Original strand, 17302563 - 17302609
Alignment:
Q  98 ctaataatttgaaaa-aatcacataattcggtgtaattacaagtgtc 143  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||    
T  17302563 ctaataatttgaaaaaaatcacataattcaatgtaattacaagtgtc 17302609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 26562688 - 26562742
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||| ||||||| ||||||||||||||| ||||||||| | ||||||    
T  26562688 cgacactgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcg 26562742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 124
Target Start/End: Complemental strand, 33001349 - 33001315
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataatt 124  Q
    |||||| ||||||||||||||||||||||||||||    
T  33001349 cgacactgctaataatttgaaaaaatcacataatt 33001315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 2224232 - 2224273
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaattacaa 138  Q
    ||||||||||| ||||||||| ||||||| ||||||||||||    
T  2224232 gctaataatttaaaaaaatcatataattcagtgtaattacaa 2224273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 6327569 - 6327524
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||||| | ||||||  ||||||||||||||||||    
T  6327569 taataatttgaaaaaattatataattaagtgtaattacaagtgtcg 6327524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 7151419 - 7151456
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||||||||||||||||||||||||  |||||||||    
T  7151419 ctaataatttgaaaaaatcacataattaagtgtaatta 7151456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 7996438 - 7996393
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||| ||||||||||||| ||||||| ||||||| |||||||||    
T  7996438 cgacactgctaataatttgagaaaatcatataattcagtgtaatta 7996393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 8022363 - 8022408
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||| ||||||||||||| ||||||| ||||||| |||||||||    
T  8022363 cgacactgctaataatttgagaaaatcatataattcagtgtaatta 8022408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 9658878 - 9658923
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||| ||||||||||| | ||||||||||||||| |||||||||    
T  9658878 cgacaccgctaataatttaagaaaatcacataattcagtgtaatta 9658923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 34225861 - 34225824
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    ||||||||||||||||||| |||||||| |||||||||    
T  34225861 ctaataatttgaaaaaatcgcataattcagtgtaatta 34225824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 34446565 - 34446622
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 148  Q
    ||||||| ||||||||||| ||||| ||||||||| ||||||| | | ||||||||||    
T  34446565 gacacggataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtc 34446622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 133
Target Start/End: Complemental strand, 13632056 - 13632013
Alignment:
Q  92 acacggctaataatttgaaaaaatcacata--attcggtgtaat 133  Q
    |||| |||||||||||||||||||||||||  ||||||||||||    
T  13632056 acactgctaataatttgaaaaaatcacataatattcggtgtaat 13632013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 30866202 - 30866150
Alignment:
Q  92 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||| ||||||||||||| |||||||||||||||  |||||||| | ||||||    
T  30866202 acaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcg 30866150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 31579276 - 31579240
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaatta 135  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  31579276 taataatttgagaaaatcacataattcagtgtaatta 31579240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 29205445 - 29205497
Alignment:
Q  92 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29205445 acacggctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 29205497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 21945502 - 21945556
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  21945502 cgacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcg 21945556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 23293046 - 23292992
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||||||||||||||||||| || |||||||||||||||    
T  23293046 cgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcg 23292992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 143
Target Start/End: Complemental strand, 28964301 - 28964255
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 143  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  28964301 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtc 28964255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 3947826 - 3947773
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 143  Q
    |||||| |||||||||||||||||||| |||||||| |||||||||||||||||    
T  3947826 cgacacagctaataatttgaaaaaatcgcataattcagtgtaattacaagtgtc 3947773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 11596405 - 11596360
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 142  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  11596405 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 11596360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 37203264 - 37203321
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 148  Q
    ||||||||||||||||||||||||| ||||||||  |||||||||||||||| |||||    
T  37203264 gacacggctaataatttgaaaaaatgacataatttagtgtaattacaagtgtagtgtc 37203321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 19482675 - 19482719
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 142  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  19482675 ctaataatttgaaaatatcacataattcggtgtaattacaagtgt 19482719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 54580075 - 54580029
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||    
T  54580075 ctaataatttgaaaaaatcacataattcagtgtaattataagtgtcg 54580029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 6485662 - 6485617
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||    
T  6485662 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 6485617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 38847072 - 38847019
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 143  Q
    |||||| ||||||||||||||||||||| || |||| |||||||||||||||||    
T  38847072 cgacacagctaataatttgaaaaaatcatattattcagtgtaattacaagtgtc 38847019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 12895169 - 12895122
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||    
T  12895169 gctaataatttgaaaaaatcacataattcaaagtaattacaagtgtcg 12895122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 30298945 - 30299000
Alignment:
Q  90 cgacacggctaataatttgaaaaaa-tcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| |||||||||||||||||| | ||||||||| ||||||||||||||||||    
T  30298945 cgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcg 30299000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 30327813 - 30327868
Alignment:
Q  90 cgacacggctaataatttgaaaaaa-tcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| |||||||||||||||||| | ||||||||| ||||||||||||||||||    
T  30327813 cgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcg 30327868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 47263992 - 47264039
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||| |||||||||||||||| |||||||||||| |||||    
T  47263992 gctaataatttgtaaaaatcacataattctgtgtaattacaaatgtcg 47264039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 49431024 - 49431079
Alignment:
Q  90 cgacacggctaataatttgaaaa-aatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||||| ||||||||    
T  49431024 cgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcg 49431079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 51701258 - 51701309
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 142  Q
    ||||| ||||||||||||||||||| ||||||||  ||||||||||||||||    
T  51701258 gacacagctaataatttgaaaaaattacataattgagtgtaattacaagtgt 51701309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 2362035 - 2361981
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||||||||| ||||||||  ||||||||| ||||||||    
T  2362035 cgacacagctaataatttgaaaaaattacataatttagtgtaattaaaagtgtcg 2361981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 8423778 - 8423724
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||| || |||||    
T  8423778 cgacaccgctaataatttgagaaaatcacataattcagtgtaattataaatgtcg 8423724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 11651194 - 11651136
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 148  Q
    |||||| ||||||||||| ||||||||||||||||| ||| || ||||||||| |||||    
T  11651194 cgacacagctaataatttaaaaaaatcacataattcagtgcaactacaagtgttgtgtc 11651136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 12797389 - 12797344
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||    
T  12797389 ctaataatttgaaaaa-tcacataattcagtgtaattacaagtgtcg 12797344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 24343506 - 24343564
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 148  Q
    |||||||| ||||||||||| ||||| ||||||||| ||||||||| | ||||||||||    
T  24343506 cgacacggataataatttgagaaaattacataattcagtgtaattataggtgtcgtgtc 24343564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 715668 - 715615
Alignment:
Q  90 cgacacggctaataatttgaaaaaa-tcacataattcggtgtaattacaagtgt 142  Q
    |||||| ||||||||||| |||||| ||||||||||| ||||||||||||||||    
T  715668 cgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgt 715615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 752994 - 752941
Alignment:
Q  90 cgacacggctaataatttgaaaaaa-tcacataattcggtgtaattacaagtgt 142  Q
    |||||| ||||||||||| |||||| ||||||||||| ||||||||||||||||    
T  752994 cgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgt 752941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 4383375 - 4383470
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacg--atgggacacgcctaatccgaggagt 191  Q
    ||||||||||||||| |||||||||||| |||||||||||| |||| |||||  ||| |||||  |||||  |  ||||||||||||||||||||||    
T  4383375 ctaataatttgaaaa-atcacataattcagtgtaattacaaatgtcagtgtcgtgtcggtgtcaaacacgacaccggacacgcctaatccgaggagt 4383470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 12895325 - 12895280
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||||||||||||||  ||||||||| ||||||||    
T  12895325 taataatttgaaaaaatcacataattttgtgtaattataagtgtcg 12895280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 15029765 - 15029809
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||    
T  15029765 gacactgctaataatttgaaaatatcacataattcagtgtaatta 15029809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 20633484 - 20633539
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 148  Q
    |||||| ||||||||||||||||||   ||||||||  |||||||||||||||||||||    
T  20633484 cgacaccgctaataatttgaaaaaa---cataattcaatgtaattacaagtgtcgtgtc 20633539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 40481644 - 40481687
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 142  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||    
T  40481644 ctaataatttgaaaa-atcacataattcagtgtaattacaagtgt 40481687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 847957 - 848028
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 167  Q
    ||||||||||||| ||||| |||||||||  | |||||||||||||| |||||| ||  |||||||||||||    
T  847957 gctaataatttgagaaaattacataattcactataattacaagtgtcggtgtcttgttggtgtcggacacga 848028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 144
Target Start/End: Complemental strand, 2626056 - 2626021
Alignment:
Q  109 aaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||||||||||||||||| ||||||    
T  2626056 aaaaaatcacataattcggtgtaattacacgtgtcg 2626021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 149
Target Start/End: Complemental strand, 14126171 - 14126112
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtct 149  Q
    |||||| | ||||||||||| ||| ||||||||||| ||||||||| ||||||| |||||    
T  14126171 cgacactgttaataatttgataaagtcacataattcagtgtaattataagtgtcatgtct 14126112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 137
Target Start/End: Complemental strand, 14465127 - 14465088
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattaca 137  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  14465127 ctaataatttgaaaaaatcacataattcaatgtaattaca 14465088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 135
Target Start/End: Complemental strand, 15659818 - 15659775
Alignment:
Q  92 acacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||    
T  15659818 acactgctaataatttgagaaaatctcataattcggtgtaatta 15659775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 142
Target Start/End: Complemental strand, 27706228 - 27706185
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaattacaagtgt 142  Q
    ||||||||| ||||||||||||||||  ||||||||||||||||    
T  27706228 taataatttaaaaaaatcacataatttagtgtaattacaagtgt 27706185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 144
Target Start/End: Original strand, 42640547 - 42640582
Alignment:
Q  109 aaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||||| ||||||||||||||||||    
T  42640547 aaaaaatcacataattcagtgtaattacaagtgtcg 42640582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Complemental strand, 15724517 - 15724483
Alignment:
Q  172 acacgcctaatccgaggagtttatgttcttcatag 206  Q
    |||||||||||||||||||||||||| ||||||||    
T  15724517 acacgcctaatccgaggagtttatgtgcttcatag 15724483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 135
Target Start/End: Complemental strand, 18576086 - 18576052
Alignment:
Q  101 ataatttgaaaaaatcacataattcggtgtaatta 135  Q
    ||||||||| |||||||||||||||||||||||||    
T  18576086 ataatttgagaaaatcacataattcggtgtaatta 18576052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 22440660 - 22440602
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 148  Q
    |||||| | ||||||||||| ||||||||||||||| ||||||||| | ||| ||||||    
T  22440660 cgacaccgttaataatttgagaaaatcacataattcagtgtaattatatgtgacgtgtc 22440602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 24613753 - 24613707
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||| |||||||||||||||  ||||| |||||||||||    
T  24613753 ctaataatttgagaaaatcacataattcaatgtaagtacaagtgtcg 24613707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 28084520 - 28084574
Alignment:
Q  90 cgacacggctaataatttgaaaa-aatcacataattcggtgtaattacaagtgtc 143  Q
    |||||| ||||| |||||||||| |||||||||||||  ||||||||||||||||    
T  28084520 cgacacagctaagaatttgaaaaaaatcacataattcaatgtaattacaagtgtc 28084574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 35158037 - 35157991
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||| |||||||||||||||  ||||||||| ||||||||    
T  35158037 ctaataatttggaaaaatcacataatttagtgtaattataagtgtcg 35157991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 40613449 - 40613503
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||| ||||| ||||||||||||||| ||||||||| | ||||||    
T  40613449 cgacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtgtcg 40613503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 16073403 - 16073447
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||| || |||||||| ||||||||||||||||||    
T  16073403 taataatttgaaaaa-tcgcataattcagtgtaattacaagtgtcg 16073447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 30982941 - 30982884
Alignment:
Q  87 acacgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||| ||| |||||| |||||| ||||||||||| ||| ||||||||| ||||||||    
T  30982941 acacgccaccgctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcg 30982884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 32910550 - 32910595
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||||| ||||||||||| ||||| ||||||||| |||||||||    
T  32910550 cgacacggataataatttgagaaaatgacataattcagtgtaatta 32910595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 36635331 - 36635368
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  36635331 ctaataatttgagaaaatcacataattcagtgtaatta 36635368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 135
Target Start/End: Original strand, 903930 - 903966
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaatta 135  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  903930 taataatttgagaaaatcacataattcagtgtaatta 903966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 135
Target Start/End: Original strand, 6863161 - 6863197
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaatta 135  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  6863161 taataatttgaaaaaatcatataattcggtgcaatta 6863197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 38148785 - 38148741
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaatt 134  Q
    |||||| ||||||| ||||| ||||||||||||||| ||||||||    
T  38148785 cgacaccgctaatagtttgagaaaatcacataattcagtgtaatt 38148741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 40179687 - 40179651
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaatta 135  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  40179687 taatagtttgaaaaaatcacataattcagtgtaatta 40179651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 56257933 - 56257977
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    ||||| ||||||||||||| ||||||| ||||||| |||||||||    
T  56257933 gacactgctaataatttgagaaaatcatataattcagtgtaatta 56257977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 6e-18; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 49651846 - 49651792
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  49651846 cgacacggctaataatttgaaaaaatcacataattcactgtaattacaagtgtcg 49651792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 26508110 - 26508163
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26508110 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 26508163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 4987351 - 4987299
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 142  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  4987351 cgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 4987299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 28918007 - 28918054
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  28918007 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 28918054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 14209120 - 14209190
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 167  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||| |||||  ||| |||||||||||||    
T  14209120 ctaataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacga 14209190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 34185183 - 34185129
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||    
T  34185183 cgacacggctaataatttcaaaaaatcacacaattcagtgtaattacaagtgtcg 34185129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 35994797 - 35994740
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 148  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  35994797 cgacacagctaataatttgaaaaa-tcacataattcagtgtaattacaagtgtcgtgtc 35994740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 1509539 - 1509592
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||| ||||||||||||||||||||||||||||  ||||||||||||||||||    
T  1509539 gacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 1509592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 21257045 - 21256992
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||| ||||||||||||||||||||||||||||| || |||||||||||||||    
T  21257045 gacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcg 21256992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 51206412 - 51206359
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||    
T  51206412 gacacagctaataatttgaaaaaatcacataattcagtgtaaatacaagtgtcg 51206359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 25948943 - 25948895
Alignment:
Q  94 acggctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 142  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  25948943 acggctaataatttgaaaaaatcacataattcagtgtaattataagtgt 25948895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 34910324 - 34910421
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga---tgggacacgcctaatccgaggagt 191  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||| |||||   || |||||||||| ||    |||||||| ||||||||||||||    
T  34910324 ctaataatttgaaaaaatcacataattcagtgtaattacaagagtcggtgtcgtatcggtgtcggacatgacaccgggacacgtctaatccgaggagt 34910421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 7928449 - 7928503
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||| | ||||||    
T  7928449 cgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcg 7928503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 10954959 - 10955005
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||    
T  10954959 ctaataatttgaaaaaatcacataattcagtgtaatcacaagtgtcg 10955005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 21479117 - 21479171
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||||||||||||| ||||| |||||||||| |||||||    
T  21479117 cgacacagctaataatttgaaaaaatcacacaattcagtgtaattactagtgtcg 21479171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 41961702 - 41961656
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||    
T  41961702 ctaataatttgaaaatatcacattattcggtgtaattacaagtgtcg 41961656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 55401082 - 55401128
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||    
T  55401082 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 55401128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 10268546 - 10268493
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 143  Q
    |||||| | ||||||||||||||||||||||||||  |||||||||||||||||    
T  10268546 cgacacagttaataatttgaaaaaatcacataatttagtgtaattacaagtgtc 10268493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 34307839 - 34307782
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 148  Q
    ||||| ||||||||||||| ||||||||||| ||| ||||||||| ||||||||||||    
T  34307839 gacaccgctaataatttgagaaaatcacatatttcagtgtaattataagtgtcgtgtc 34307782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 3164085 - 3164033
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 142  Q
    |||||| ||||||||||||||||||||||||||||| ||||||  ||||||||    
T  3164085 cgacacagctaataatttgaaaaaatcacataattcagtgtaagaacaagtgt 3164033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 134
Target Start/End: Original strand, 14979180 - 14979224
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaatt 134  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||    
T  14979180 cgacacagctaataatttgaaaaaatcacataattcagtgtaatt 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 20503474 - 20503518
Alignment:
Q  100 aataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||    
T  20503474 aataatttgaaaaaatgacataattcagtgtaattacaagtgtcg 20503518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 11610522 - 11610573
Alignment:
Q  92 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 143  Q
    |||| ||||||||||| ||||||||||||||||| ||||| |||||||||||    
T  11610522 acaccgctaataatttaaaaaaatcacataattcagtgtagttacaagtgtc 11610573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 14832105 - 14832176
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 167  Q
    |||||||||||||||||||||||||| ||  |||||||||||||||| |||||  ||| || ||||||||||    
T  14832105 gctaataatttgaaaaaatcacataactcaatgtaattacaagtgtcagtgtcgtgtcggtatcggacacga 14832176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 750670 - 750624
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||| ||||||||||||| || ||||||||||||||    
T  750670 ctaataatttgaaaatatcacataattcgctgcaattacaagtgtcg 750624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 4991027 - 4990973
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||| ||||| ||||| ||||||||| ||||||||||||||||||    
T  4991027 cgacaccgctaatagtttgagaaaattacataattcagtgtaattacaagtgtcg 4990973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 8383256 - 8383310
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||| ||||||| ||||||| ||||||||| ||||||||    
T  8383256 cgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcg 8383310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 144
Target Start/End: Complemental strand, 8587069 - 8587027
Alignment:
Q  102 taatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  8587069 taatttgaaaaaatcacataattaagtgtaattacaagtgtcg 8587027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 8789610 - 8789556
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||| ||||||||| ||||||||||||||| ||||||||| | ||||||    
T  8789610 cgacacggcttataatttgagaaaatcacataattccgtgtaattatatgtgtcg 8789556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 14216899 - 14216969
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgt-cgtgtctagtcagtgtcggacacga 167  Q
    |||||||||| |||| |||| ||||||| |||||||||||||||| ||||||  || ||||||||||||||    
T  14216899 ctaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacga 14216969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 14223028 - 14223098
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgt-cgtgtctagtcagtgtcggacacga 167  Q
    |||||||||| |||| |||| ||||||| |||||||||||||||| ||||||  || ||||||||||||||    
T  14223028 ctaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacga 14223098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 15796354 - 15796300
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| | ||||||||||||||||||| ||||||| |||||||||||| |||||    
T  15796354 cgacacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcg 15796300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 24205101 - 24205043
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 148  Q
    |||||||| ||||||||||| ||||| ||||||| | ||||||||| ||||||||||||    
T  24205101 cgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtc 24205043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 25775516 - 25775562
Alignment:
Q  99 taataatttgaaaa-aatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||    
T  25775516 taataatttgaaaataatcacataattcagtgtaattacaagtgtcg 25775562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 27505245 - 27505299
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| |||||||||||  |||||||||||||||  ||||||||||||||||||    
T  27505245 cgacacagctaataatttttaaaaatcacataattaagtgtaattacaagtgtcg 27505299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 28812522 - 28812568
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||||||    
T  28812522 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcg 28812568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 18426956 - 18426993
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||||||| |||||||||||||||||||||||||||    
T  18426956 ctaataatttcaaaaaatcacataattcggtgtaatta 18426993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 140
Target Start/End: Complemental strand, 26492258 - 26492215
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaattacaagt 140  Q
    ||||||||||||||||||||| | ||||| ||||||||||||||    
T  26492258 gctaataatttgaaaaaatcatacaattcagtgtaattacaagt 26492215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Original strand, 40052331 - 40052366
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattc 125  Q
    |||||| |||||||||||||||||||||||||||||    
T  40052331 cgacacagctaataatttgaaaaaatcacataattc 40052366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 8593136 - 8593190
Alignment:
Q  91 gacacggctaataatttg-aaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||| |||| ||||||| ||||||||||||||||| || |||||||||||||||    
T  8593136 gacacagctactaatttggaaaaaatcacataattcagtataattacaagtgtcg 8593190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 135
Target Start/End: Original strand, 11251984 - 11252022
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  11251984 gctaataatttgagaaaatcacataattcagtgtaatta 11252022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 14747560 - 14747610
Alignment:
Q  90 cgacacggctaataatttgaaaa-aatcacataattcggtgtaattacaag 139  Q
    |||||| |||||||||||||||| ||||||||||||  |||||||||||||    
T  14747560 cgacacagctaataatttgaaaaaaatcacataatttagtgtaattacaag 14747610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 14829689 - 14829742
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| |||||||||||||||| ||||||||||||   ||||||||||||||||    
T  14829689 cgacacagctaataatttgaaaa-atcacataattcatggtaattacaagtgtcg 14829742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 16000068 - 16000022
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||| ||||||| ||||||||| |||||| |||||||||||    
T  16000068 ctaataatttaaaaaaataacataattcagtgtaactacaagtgtcg 16000022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 17005671 - 17005625
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||| ||||||| ||||||| ||||||||| ||||||||    
T  17005671 ctaataatttgataaaatcatataattcagtgtaattataagtgtcg 17005625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 29508451 - 29508497
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||||| ||||||| ||||||||| | ||||||    
T  29508451 ctaataatttgaaaaaatcatataattcagtgtaattatatgtgtcg 29508497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 55212962 - 55213016
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| | ||||||||| ||||||||||||||||  ||| ||||||||||||||    
T  55212962 cgacacagttaataattttaaaaaatcacataatttagtgcaattacaagtgtcg 55213016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 11313860 - 11313815
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||| ||||||||||||| ||||||||||||||  |||||||||    
T  11313860 cgacactgctaataatttgagaaaatcacataatttagtgtaatta 11313815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 148
Target Start/End: Complemental strand, 12704720 - 12704659
Alignment:
Q  87 acacgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 148  Q
    |||| |||||| ||||||||||||||||| |||||||||  |||||| | | ||||||||||    
T  12704720 acacaacacggataataatttgaaaaaatgacataattcaatgtaatcataggtgtcgtgtc 12704659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 23870619 - 23870574
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||| ||||||||||||||||||||| ||||||| |||| ||||    
T  23870619 cgacaccgctaataatttgaaaaaatcatataattcagtgtgatta 23870574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 24633773 - 24633810
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  24633773 ctaataatttgagaaaatcacataattcggtgcaatta 24633810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 25064908 - 25064953
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||| |||||| |||||||||||||||||||||  |||||||||    
T  25064908 cgacaccgctaatgatttgaaaaaatcacataatttagtgtaatta 25064953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 25365470 - 25365519
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 148  Q
    ||||||||||| || || ||||||||||||||||| | ||||||||||||    
T  25365470 taataatttgagaatatgacataattcggtgtaatcataagtgtcgtgtc 25365519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 1550141 - 1550217
Alignment:
Q  92 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 167  Q
    |||| |||||||||||||||||||||||  |||| ||||||||| | ||||| |||||  ||||||||  |||||||    
T  1550141 acaccgctaataatttgaaaaaatcacactattcagtgtaattataggtgtcagtgtcgtgtcagtgttcgacacga 1550217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 135
Target Start/End: Original strand, 4201404 - 4201440
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaatta 135  Q
    ||||||||||||||||||||||||||  |||||||||    
T  4201404 taataatttgaaaaaatcacataattaagtgtaatta 4201440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 142
Target Start/End: Original strand, 7171520 - 7171552
Alignment:
Q  110 aaaaatcacataattcggtgtaattacaagtgt 142  Q
    |||||||| ||||||||||||||||||||||||    
T  7171520 aaaaatcatataattcggtgtaattacaagtgt 7171552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 8930880 - 8930836
Alignment:
Q  100 aataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||| |||||||||||||||||| |||||||| | ||||||    
T  8930880 aataattttaaaaaatcacataattcgatgtaattatatgtgtcg 8930836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 9624641 - 9624685
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    ||||| ||||||||||||| |||||||||||||||  ||||||||    
T  9624641 gacactgctaataatttgagaaaatcacataattcaatgtaatta 9624685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 10690321 - 10690277
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    ||||| ||||||||| ||| ||||||||||||||| |||||||||    
T  10690321 gacaccgctaataatctgagaaaatcacataattcagtgtaatta 10690277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 15544693 - 15544737
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    ||||| ||||||||||||| ||||||||||||||| || ||||||    
T  15544693 gacaccgctaataatttgataaaatcacataattctgtataatta 15544737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 27277897 - 27277853
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    ||||| ||||||||||||| ||||||||||||||  |||||||||    
T  27277897 gacactgctaataatttgagaaaatcacataatttagtgtaatta 27277853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 30404910 - 30404856
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  30404910 cgacacggttaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 30404856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 38117219 - 38117167
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 142  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  38117219 cgacacagctaataatttgaaaaaatcacatacttcggtgtaattacaagtgt 38117167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 30717583 - 30717536
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  30717583 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 30717536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 2438778 - 2438725
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  2438778 gacacagctaataatttcaaaaaatcacataattcagtgtaattacaagtgtcg 2438725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 21374759 - 21374706
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 143  Q
    |||||| ||||||||||||||||||| ||||||||| |||||||||||||||||    
T  21374759 cgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtc 21374706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 169
Target Start/End: Original strand, 37419742 - 37419822
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacgatg 169  Q
    ||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| | |||||  ||| |||||||||||||||    
T  37419742 cgacatggcaaataatttgaaaaaatcacaaaattcagtgtaattacaagtgccggtgtcgtgtcggtgtcggacacgatg 37419822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 20539734 - 20539680
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||||||||||| ||||||  ||||||||||||||||||    
T  20539734 cgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcg 20539680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 37558976 - 37559030
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| |||||||||||| ||||||||||||||||  |||||||||||||||||    
T  37558976 cgacacagctaataatttgtaaaaatcacataattcaatgtaattacaagtgtcg 37559030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 11223922 - 11223869
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||| ||||||| ||||||||||| ||||||||| ||||||||||||||||||    
T  11223922 gacacagctaatattttgaaaaaataacataattcagtgtaattacaagtgtcg 11223869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 28677908 - 28677953
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||    
T  28677908 cgacaccgctaataatttgaaaaaatcacataattcagtgtaatta 28677953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 39323263 - 39323316
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 143  Q
    |||||| ||||||||||||| ||||| ||||||||| |||||||||||||||||    
T  39323263 cgacaccgctaataatttgacaaaattacataattcagtgtaattacaagtgtc 39323316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 19536450 - 19536403
Alignment:
Q  98 ctaataatttgaaaaaa-tcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  19536450 ctaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcg 19536403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 974754 - 974800
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||||    
T  974754 ctaataatttgaaaagatcacattattcagtgtaattacaagtgtcg 974800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 133
Target Start/End: Original strand, 5473336 - 5473370
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaat 133  Q
    |||||||||||||||||||||||||||||||||||    
T  5473336 taataatttgaaaaaatcacataattcggtgtaat 5473370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 12668475 - 12668429
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||| ||||||||| ||||||||| ||||||||    
T  12668475 ctaataatttgaaaaaatgacataattcagtgtaattataagtgtcg 12668429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 12940987 - 12940941
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||||| ||||||| |||||||||||| |||||    
T  12940987 ctaataatttgaaaaaatcatataattcagtgtaattacaaatgtcg 12940941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 15657871 - 15657917
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||| |||||||||||||||| |||||||||||| |||||    
T  15657871 ctaataatttgtaaaaatcacataattcagtgtaattacaaatgtcg 15657917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 18841065 - 18841019
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||| ||||||||  ||||||||||||||||||    
T  18841065 ctaataatttgaaaaaattacataattaagtgtaattacaagtgtcg 18841019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 15972881 - 15972926
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||||| ||| ||||| ||||||||||||||||||    
T  15972881 taataatttgaaaaaattacacaattcagtgtaattacaagtgtcg 15972926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 18421971 - 18422016
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||| |||| |||||||||||| ||||||||||||||||||    
T  18421971 taataatttaaaaatatcacataattcagtgtaattacaagtgtcg 18422016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 21616761 - 21616806
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||| ||||||||||||| ||||||||||||||| |||||||||    
T  21616761 cgacaccgctaataatttgagaaaatcacataattcagtgtaatta 21616806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 21782878 - 21782833
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||| ||||||||||||| ||||||||||||||| |||||||||    
T  21782878 cgacactgctaataatttgagaaaatcacataattcagtgtaatta 21782833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 143
Target Start/End: Original strand, 33153431 - 33153476
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 143  Q
    ||||| |||| ||||||||||||||||| |||||||||||||||||    
T  33153431 ctaatgatttaaaaaaatcacataattcagtgtaattacaagtgtc 33153476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 4882749 - 4882677
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg-tgtctagtcagtgtcggacacgat 168  Q
    |||||| |||||||||||| | ||||||| |||||||||||||||||| ||||  ||| ||||| ||||||||    
T  4882749 gctaattatttgaaaaaatgatataattcagtgtaattacaagtgtcgatgtcgtgtcggtgtcagacacgat 4882677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 24894388 - 24894440
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 142  Q
    |||||| ||||||||||| ||||||||||||||||| ||| ||||| ||||||    
T  24894388 cgacacagctaataatttaaaaaaatcacataattcagtgcaattaaaagtgt 24894440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 14996284 - 14996229
Alignment:
Q  90 cgacacggctaataatttgaaaaaa-tcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| |||||||||||||||||| ||| ||||||  ||||||||||||||||||    
T  14996284 cgacacagctaataatttgaaaaaaatcatataatttagtgtaattacaagtgtcg 14996229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 5040738 - 5040787
Alignment:
Q  97 gctaataatttgaaaa--aatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||||  |||||||||||||  |||||||||||||||||    
T  5040738 gctaataatttgaaaaaaaatcacataattcaatgtaattacaagtgtcg 5040787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 6940254 - 6940308
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||| ||||| | ||||||||  ||||||||||||||||||    
T  6940254 cgacacagctaataattttaaaaagttacataattaagtgtaattacaagtgtcg 6940308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 20473329 - 20473375
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||| ||||| ||| ||||||| ||||||||||||||||||    
T  20473329 ctaataatttaaaaaactcatataattcagtgtaattacaagtgtcg 20473375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 23058494 - 23058448
Alignment:
Q  99 taataatttgaaaaaa-tcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||| ||||||||| | ||||||||||||||||||    
T  23058494 taataatttgaaaaaaatcacataatccagtgtaattacaagtgtcg 23058448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 23718025 - 23718079
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||| ||| ||||||||||| ||||||||| | ||||||    
T  23718025 cgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcg 23718079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 24105697 - 24105751
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||| ||| ||||||||||| ||||||||| | ||||||    
T  24105697 cgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcg 24105751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 26769518 - 26769564
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||| ||||||| ||  |||||||||||||||||||    
T  26769518 ctaataatttgaaaatatcacattatctggtgtaattacaagtgtcg 26769564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 30335424 - 30335470
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||| ||||||||  |||||||||||| |||||    
T  30335424 ctaataatttgaaaaaatgacataatttagtgtaattacaaatgtcg 30335470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 34221557 - 34221503
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||||||||  |||||||||  || ||||||||||||||    
T  34221557 cgacacagctaataatttgaaaaaaatacataattctatgcaattacaagtgtcg 34221503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 36756396 - 36756350
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||| |||| ||||||||| ||||||||| ||||||||    
T  36756396 ctaataatttgaagaaataacataattcagtgtaattataagtgtcg 36756350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 37411304 - 37411250
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||| ||||||||||||||| |||| |||| | ||||||    
T  37411304 cgacaccgctaataatttgagaaaatcacataattcagtgtgattatatgtgtcg 37411250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 42832336 - 42832282
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||| ||||| ||||| ||| ||||||||| ||||||||    
T  42832336 cgacaccgctaataatttgagaaaattacatatttcagtgtaattataagtgtcg 42832282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 10535819 - 10535762
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgt 147  Q
    |||||| | ||||||||||| ||||| ||||||||| ||||||| | |||||||||||    
T  10535819 cgacaccgataataatttgagaaaatgacataattcagtgtaatcataagtgtcgtgt 10535762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 18276520 - 18276565
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||| ||||||||||||| |||||||| |||||| |||||||||    
T  18276520 cgacaccgctaataatttgagaaaatcacttaattcagtgtaatta 18276565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 21091722 - 21091775
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 143  Q
    |||||| ||||||||||| | ||||| ||||| ||| |||||||||||||||||    
T  21091722 cgacaccgctaataatttaagaaaataacatacttcagtgtaattacaagtgtc 21091775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 31808076 - 31808121
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||| ||||||||||| | ||||||||||||||| |||||||||    
T  31808076 cgacaccgctaataatttaacaaaatcacataattcagtgtaatta 31808121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 36409687 - 36409642
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||| ||| ||||||||||||||||||||||||  |||||||||    
T  36409687 cgacaccgctgataatttgaaaaaatcacataatttagtgtaatta 36409642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 44860320 - 44860373
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||| ||||||||||||| |||||| |||||||| ||||||||| | ||||||    
T  44860320 gacaccgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcg 44860373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 18420492 - 18420440
Alignment:
Q  92 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||| ||||||||||||| |||||||||||||||  || ||||| ||||||||    
T  18420492 acactgctaataatttgagaaaatcacataattcaatgcaattataagtgtcg 18420440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 135
Target Start/End: Original strand, 28412358 - 28412394
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaatta 135  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  28412358 taataatttgataaaatcacataattcagtgtaatta 28412394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 20171 - 20224
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 143  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  20171 cgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtc 20224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 167
Target Start/End: Original strand, 21465412 - 21465489
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtg-tcgtgtctagtcagtgtcggacacga 167  Q
    ||||| ||||||||||||||||||||| |||||||| |||||||||||||| | |||||  |||||||||||||||||    
T  21465412 gacacagctaataatttgaaaaaatcatataattcgatgtaattacaagtgttggtgtcgtgtcagtgtcggacacga 21465489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 25566841 - 25566894
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25566841 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 25566894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 100 - 191
Target Start/End: Complemental strand, 17468558 - 17468460
Alignment:
Q  100 aataatttgaaaaaatcacataattcggtgtaattacaa------gtgtcgtgtctagtcagtgtcggacacga-tgggacacgcctaatccgaggagt 191  Q
    ||||||||| |||||||||||||| ||||||||||||||      ||||||||||  ||| |||||||||||||  |||||||||||||||||||||||    
T  17468558 aataatttgtaaaaatcacataatgcggtgtaattacaagtgttggtgtcgtgtcgtgtcggtgtcggacacgagggggacacgcctaatccgaggagt 17468460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 167
Target Start/End: Complemental strand, 2572108 - 2572038
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 167  Q
    |||||||||||||||||||||||||||  ||||||||||||||||| |||||  ||| |||||||||||||    
T  2572108 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtctgtgtcggacacga 2572038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 4948659 - 4948705
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  4948659 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 4948705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 167
Target Start/End: Original strand, 22651975 - 22652053
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 167  Q
    |||||| |||||||||||||||||||||||||||||  | |||||||||||||| |||||  ||| |||||||||||||    
T  22651975 cgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcgtgtcggtgtcggacacga 22652053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 41832000 - 41831943
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgt 147  Q
    |||||| | ||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  41832000 cgacacagttaataatttgaaaaaatcacataattcagtgtaactacaagtgtcgtgt 41831943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 208
Target Start/End: Complemental strand, 13437024 - 13436908
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacgatgggacacgcctaatccgagg 188  Q
    |||||| |||||||||||||||||||||||||||||   ||||| ||||||||| |||||  ||| ||||| |||||   |||||||||||||||| |||    
T  13437024 cgacacagctaataatttgaaaaaatcacataattcatggtaataacaagtgtcggtgtcgtgtcggtgtc-gacac--cgggacacgcctaatccaagg 13436928  T
Q  189 agtttatgttcttcatagat 208  Q
    ||| | ||| ||||||||||    
T  13436927 agtgtctgtgcttcatagat 13436908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 8342978 - 8343025
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||    
T  8342978 gctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 8343025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 143
Target Start/End: Original strand, 8343322 - 8343368
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 143  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||    
T  8343322 gctaataatttgaaaaaatcacataatttagtgtaattacaagtgtc 8343368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 18407718 - 18407772
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  18407718 cgacacagctaataattcaaaaaaatcacataattcagtgtaattacaagtgtcg 18407772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 29510364 - 29510310
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||||||||||||| ||||| || |||||||||||||||    
T  29510364 cgacacagctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcg 29510310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 143
Target Start/End: Complemental strand, 30077440 - 30077394
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 143  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||    
T  30077440 gctaataatttgaaaacatcacataattcagtgtaattacaagtgtc 30077394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 20873077 - 20873122
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||    
T  20873077 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 20873122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 40332191 - 40332244
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||| || |||||||||| ||||||||||||||| ||||||||||||||||||    
T  40332191 gacactgcaaataatttgagaaaatcacataattcagtgtaattacaagtgtcg 40332244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 22595993 - 22596045
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 142  Q
    |||||| ||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  22595993 cgacacagctaataatttaaaaaaataacataattcagtgtaattacaagtgt 22596045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 36450806 - 36450762
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 142  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||    
T  36450806 ctaataatttgaaaaaatcacagaattcagtgtaattacaagtgt 36450762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 22197800 - 22197749
Alignment:
Q  92 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 143  Q
    |||| ||||||||||||||||| ||||||||||  |||||||||||||||||    
T  22197800 acacagctaataatttgaaaaattcacataatttagtgtaattacaagtgtc 22197749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 141
Target Start/End: Complemental strand, 30271351 - 30271300
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtg 141  Q
    |||||| |||||| |||||||||||||||||||| | |||||||||||||||    
T  30271351 cgacacagctaatcatttgaaaaaatcacataatgcagtgtaattacaagtg 30271300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 4298946 - 4298892
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| | ||||||||||||||||||||||||||   |||||||||||||||||    
T  4298946 cgacacagttaataatttgaaaaaatcacataatttaatgtaattacaagtgtcg 4298892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 15816181 - 15816135
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||||||||||||  ||||||||| ||||||||    
T  15816181 ctaataatttgaaaaaatcacataatttagtgtaattataagtgtcg 15816135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 24613520 - 24613573
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| |||||||||||||||| |||||||||||  ||||||||||||||||||    
T  24613520 cgacacagctaataatttgaaaa-atcacataattaagtgtaattacaagtgtcg 24613573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 167
Target Start/End: Original strand, 28745497 - 28745575
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg-tgtctagtcagtgtcggacacga 167  Q
    |||||| ||||||||||||||||| |||||||||||  ||||| ||||| ||||| ||||  ||| |||||||||||||    
T  28745497 cgacactgctaataatttgaaaaattcacataattcaatgtaactacaaatgtcgatgtcgtgtcggtgtcggacacga 28745575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 167
Target Start/End: Complemental strand, 29447162 - 29447092
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 167  Q
    |||||||||||| |||||||||||||||  ||||| |||||||||| |||||  ||| |||||||||||||    
T  29447162 ctaataatttgagaaaatcacataattcaatgtaactacaagtgtcggtgtcatgtcggtgtcggacacga 29447092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 34897084 - 34897138
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||| | ||||||    
T  34897084 cgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcg 34897138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 41838183 - 41838125
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 148  Q
    |||||| ||||||||||| ||||||||||||||||| ||| || ||||||||| |||||    
T  41838183 cgacacagctaataatttaaaaaaatcacataattcagtgcaactacaagtgttgtgtc 41838125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 44067515 - 44067573
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 148  Q
    |||||||| ||||||||||| ||||| ||||||| | ||||||||| ||||||||||||    
T  44067515 cgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtc 44067573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 135
Target Start/End: Original strand, 3025557 - 3025595
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  3025557 gctaataatttgagaaaatcacataattcagtgtaatta 3025595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 4673485 - 4673435
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagt 140  Q
    |||||| | ||||||||||||||||||| | ||||| ||||||||||||||    
T  4673485 cgacacagataataatttgaaaaaatcataaaattcagtgtaattacaagt 4673435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 5813591 - 5813645
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||||||| ||||||| ||  |||||| |||||||||||    
T  5813591 cgacacagctaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcg 5813645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 142
Target Start/End: Original strand, 7442846 - 7442896
Alignment:
Q  92 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 142  Q
    |||| ||||||||||| | ||||| ||||||||| ||||||||||||||||    
T  7442846 acaccgctaataatttcataaaattacataattcagtgtaattacaagtgt 7442896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 11927146 - 11927092
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| | ||||||||||| ||||||||||||||| ||||||||| | ||||||    
T  11927146 cgacactgttaataatttgataaaatcacataattcagtgtaattatatgtgtcg 11927092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 13844656 - 13844602
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||| ||||||||||||||  ||||||||| | ||||||    
T  13844656 cgacactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcg 13844602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 20679447 - 20679401
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||| ||||||||||| ||| ||||||||| ||||||||    
T  20679447 ctaataatttgagaaaatcacatagttcagtgtaattataagtgtcg 20679401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 25192407 - 25192353
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||||||| | ||||||||| || |||||| ||||||||    
T  25192407 cgacacagctaataatttgaaaaagtgacataattcagtataattataagtgtcg 25192353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 124
Target Start/End: Original strand, 27101514 - 27101548
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataatt 124  Q
    |||||| ||||||||||||||||||||||||||||    
T  27101514 cgacaccgctaataatttgaaaaaatcacataatt 27101548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 31236637 - 31236583
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||| |||||||||||||||  |||||||| | ||||||    
T  31236637 cgacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcg 31236583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 31556996 - 31557045
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagt 140  Q
    |||||| | |||||||||||||| |||||||||||| ||||||||||||||    
T  31556996 cgacacagttaataatttgaaaa-atcacataattcagtgtaattacaagt 31557045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 4611533 - 4611578
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||| ||||||||||||| ||||| ||||||||| |||||||||    
T  4611533 cgacaccgctaataatttgagaaaataacataattcagtgtaatta 4611578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 12606892 - 12606835
Alignment:
Q  87 acacgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||| ||||||||||||| ||||||| |||||||  |||||||| | ||||||    
T  12606892 acacgacactgctaataatttgagaaaatcatataattcaatgtaattatatgtgtcg 12606835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 14134706 - 14134743
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  14134706 ctaataatttgagaaaatcacataattcagtgtaatta 14134743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 24362262 - 24362217
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||| ||||||||||||| | ||||||||||||| |||||||||    
T  24362262 cgacaccgctaataatttgagagaatcacataattcagtgtaatta 24362217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 24669441 - 24669486
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||  |||| ||||||||| ||||||||||||||||||    
T  24669441 taataatttgaggaaattacataattcagtgtaattacaagtgtcg 24669486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 28642408 - 28642457
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagt 140  Q
    ||||||| ||||||||||||||| | ||||||||| |||||| |||||||    
T  28642408 gacacggttaataatttgaaaaatttacataattcagtgtaactacaagt 28642457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 36934669 - 36934714
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||| |||||||||| ||||||||||||||||||  ||||||||    
T  36934669 cgacaccgctaataattcgaaaaaatcacataattcattgtaatta 36934714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 39954339 - 39954294
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||| ||||||||||||| ||||||||||||||  |||||||||    
T  39954339 cgacaccgctaataatttgagaaaatcacataatttagtgtaatta 39954294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 14731712 - 14731756
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    ||||| ||||||||||||| ||||||||||||||  |||||||||    
T  14731712 gacactgctaataatttgagaaaatcacataatttagtgtaatta 14731756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 124
Target Start/End: Complemental strand, 35519865 - 35519833
Alignment:
Q  92 acacggctaataatttgaaaaaatcacataatt 124  Q
    |||| ||||||||||||||||||||||||||||    
T  35519865 acacagctaataatttgaaaaaatcacataatt 35519833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 51810 - 51862
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 142  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  51810 cgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 51862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 9e-17; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 113298 - 113350
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 142  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  113298 cgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 113350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 24577238 - 24577192
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  24577238 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 24577192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 191
Target Start/End: Complemental strand, 35702648 - 35702557
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtctagtcagtgtcggacacgatgggacacgcctaatccgagga 189  Q
    |||||| ||||||||||||||||  ||| ||||||  |||||||||||||||||          ||||||||||||||||||||||||||||||||||||    
T  35702648 cgacacagctaataatttgaaaacttcaaataattaagtgtaattacaagtgtc----------agtgtcggacacgatgggacacgcctaatccgagga 35702559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 38078721 - 38078667
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| |||||||||||||||||||||||||||||  |||||||||||||||||    
T  38078721 cgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcg 38078667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 1486768 - 1486715
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  1486768 gacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcg 1486715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 22515946 - 22515893
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||| ||||||||||||||||||||||||||||  ||||||||||||||||||    
T  22515946 gacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 22515893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 40258984 - 40258939
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  40258984 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 40258939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 167
Target Start/End: Original strand, 47989505 - 47989574
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 167  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||| |||||  ||| |||||||||||||    
T  47989505 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacga 47989574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 18337338 - 18337382
Alignment:
Q  100 aataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  18337338 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 18337382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 31015044 - 31015096
Alignment:
Q  92 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||| ||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  31015044 acacagctaataatttgagaaaatcacataattcagtgtaattacaagtgtcg 31015096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 1705044 - 1704998
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||    
T  1705044 ctaataatttgaaaaaatcacataattcagggtaattacaagtgtcg 1704998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 6612222 - 6612152
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacgat 168  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||| |||||  |||  |||||||||||||    
T  6612222 taataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtcgatgtcggacacgat 6612152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 18190160 - 18190114
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||    
T  18190160 ctaataatttgaaaaaattacataattcagtgtaattacaagtgtcg 18190114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 21378577 - 21378631
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| |||||||| |||||||||| ||||||||| ||||||||||||||||||    
T  21378577 cgacacagctaataaattgaaaaaattacataattcagtgtaattacaagtgtcg 21378631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 22881668 - 22881622
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||    
T  22881668 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 22881622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 31672955 - 31672905
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagt 140  Q
    |||||| |||||||||||||||||||||| |||||| ||||||||||||||    
T  31672955 cgacacagctaataatttgaaaaaatcacttaattcagtgtaattacaagt 31672905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 42359501 - 42359455
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  42359501 ctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcg 42359455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 46348443 - 46348389
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||||||||||| ||||||  ||||||||||||||||||    
T  46348443 cgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcg 46348389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 398825 - 398780
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||    
T  398825 cgacaccgctaataatttgaaaaaatcacataattcagtgtaatta 398780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 48450645 - 48450593
Alignment:
Q  92 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||| ||||||||||||||||||| ||||||||  ||||||||||||||||||    
T  48450645 acacagctaataatttgaaaaaataacataatttagtgtaattacaagtgtcg 48450593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 51410031 - 51410078
Alignment:
Q  98 ctaataatttgaaaa-aatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  51410031 ctaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcg 51410078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 3490450 - 3490392
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 148  Q
    |||||| ||||||||||||| ||||  |||| |||| ||||||||||||||||||||||    
T  3490450 cgacactgctaataatttgagaaaactacattattcagtgtaattacaagtgtcgtgtc 3490392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 10572641 - 10572595
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||| ||||||||||||||||||||||||| | ||||||    
T  10572641 ctaataatttgagaaaatcacataattcggtgtaattaaatgtgtcg 10572595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 19058916 - 19058862
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||| |||| || ||||||||| ||||||||||||||||||    
T  19058916 cgacacagctaataatttaaaaagataacataattcagtgtaattacaagtgtcg 19058862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 28273140 - 28273094
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||| |||||||||||||| ||||||| ||||||||||||||||||    
T  28273140 ctaatcatttgaaaaaatcatataattcagtgtaattacaagtgtcg 28273094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 36878460 - 36878514
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||| | ||||||    
T  36878460 cgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcg 36878514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 41877530 - 41877476
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||| ||||| ||||||||  ||||||||||||||||||    
T  41877530 cgacaccgctaataatttgagaaaattacataatttagtgtaattacaagtgtcg 41877476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 1815265 - 1815310
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||| |||| ||||||||||||||||| ||||||||||||||||||    
T  1815265 taattattttaaaaaatcacataattcagtgtaattacaagtgtcg 1815310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 5898326 - 5898281
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||| ||||||||| ||||||||||||||||||| |||||||||    
T  5898326 cgacaccgctaataatctgaaaaaatcacataattcagtgtaatta 5898281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 13011276 - 13011223
Alignment:
Q  90 cgacacggctaataatttgaaaaaa-tcacataattcggtgtaattacaagtgt 142  Q
    |||||| |||||||||||||||||| ||||||||||  ||||||||||||||||    
T  13011276 cgacacagctaataatttgaaaaaaatcacataattaagtgtaattacaagtgt 13011223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 14359581 - 14359529
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 143  Q
    |||||| ||||||||||||||||| ||||||||||  |||||||||||||||||    
T  14359581 cgacacagctaataatttgaaaaa-tcacataatttagtgtaattacaagtgtc 14359529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 18471297 - 18471353
Alignment:
Q  90 cgacacggctaataatttgaaaa--aatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||||||  ||||||||||||| || |||||||||||||||    
T  18471297 cgacacagctaataatttgaaaaaaaatcacataattcagtataattacaagtgtcg 18471353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 23738677 - 23738722
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||| ||||||||||||||||||||||||||||| ||| |||||    
T  23738677 cgacacagctaataatttgaaaaaatcacataattcagtgcaatta 23738722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 32434768 - 32434723
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 143  Q
    |||||||||||||||| |||||||||||  ||||||||||||||||    
T  32434768 ctaataatttgaaaaagtcacataattcattgtaattacaagtgtc 32434723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 9709821 - 9709873
Alignment:
Q  92 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||| ||||||||||||| |||||||||||||||| |||||||| | ||||||    
T  9709821 acaccgctaataatttgagaaaatcacataattcgttgtaattatatgtgtcg 9709873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 12443520 - 12443476
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaatt 134  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||    
T  12443520 cgacacagctaataatttgagaaaatcacataattcagtgtaatt 12443476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 22794136 - 22794080
Alignment:
Q  92 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 148  Q
    |||||| ||||||||||||||||| ||||||| | ||||||||| | ||||||||||    
T  22794136 acacggataataatttgaaaaaatgacataatacagtgtaattataggtgtcgtgtc 22794080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 31694765 - 31694694
Alignment:
Q  97 gctaataatttgaaaaaa--tcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacac 165  Q
    ||||||||||||||||||  ||||||||||| || |||||||||||||| |||||  ||| |||||||||||    
T  31694765 gctaataatttgaaaaaaaatcacataattcagtataattacaagtgtcggtgtcgtgtcggtgtcggacac 31694694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 32461515 - 32461471
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 142  Q
    |||||||||||||||||||||||||||   |||||||||||||||    
T  32461515 ctaataatttgaaaaaatcacataatttaatgtaattacaagtgt 32461471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 40181871 - 40181915
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    ||||| ||||||||||||| ||||||||||||||| |||||||||    
T  40181871 gacactgctaataatttgagaaaatcacataattcagtgtaatta 40181915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 5927398 - 5927347
Alignment:
Q  92 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 143  Q
    |||| ||||||||||||||||||||| ||||||   ||||||||||||||||    
T  5927398 acactgctaataatttgaaaaaatcatataatttaatgtaattacaagtgtc 5927347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 17778549 - 17778599
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||| |||||||||||||||||||||||||   | ||||||||||||||||||    
T  17778549 gacacagctaataatttgaaaaaatcacata---cagtgtaattacaagtgtcg 17778599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 167
Target Start/End: Original strand, 25361896 - 25361963
Alignment:
Q  101 ataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 167  Q
    ||||||||| ||||||||||||||| ||||||||| | ||||| |||||  ||| |||||||||||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacacga 25361963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 167
Target Start/End: Original strand, 44482240 - 44482307
Alignment:
Q  101 ataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 167  Q
    ||||||||| ||||||||||||||| ||||||||| | ||||| |||||  ||| |||||||||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacga 44482307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 1864940 - 1864886
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| | ||||||||||| ||||||||||||||| ||||||||| | ||||||    
T  1864940 cgacacagttaataatttgagaaaatcacataattcagtgtaattatatgtgtcg 1864886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 5376560 - 5376506
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||| | ||||| ||||||||| ||||||||| ||||||||    
T  5376560 cgacaccgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcg 5376506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 5944287 - 5944336
Alignment:
Q  97 gctaataatttgaaaa--aatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||||||||||||  ||||||||||||| ||||||||| ||||||||    
T  5944287 gctaataatttgaaaaaaaatcacataattcagtgtaattataagtgtcg 5944336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 140
Target Start/End: Original strand, 6332678 - 6332719
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagt 140  Q
    ||||||||||||||| |||||||||||| ||||||||||||||    
T  6332678 ctaataatttgaaaa-atcacataattcagtgtaattacaagt 6332719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 9629960 - 9629906
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||| ||||||| ||||||| |||| |||| ||||||||    
T  9629960 cgacaccgctaataatttgataaaatcatataattcagtgtgattataagtgtcg 9629906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 135
Target Start/End: Complemental strand, 16927238 - 16927200
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    ||||||||||||||||||||| ||||||| |||||||||    
T  16927238 gctaataatttgaaaaaatcatataattcagtgtaatta 16927200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Original strand, 17754310 - 17754352
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaa 132  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||    
T  17754310 cgacaccgctaataatttgaaaaaattacataattcagtgtaa 17754352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 18556516 - 18556466
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagt 140  Q
    |||||| |||||||||||||||| |||||||||||   |||||||||||||    
T  18556516 cgacacagctaataatttgaaaatatcacataatttaatgtaattacaagt 18556466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 37598839 - 37598884
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||||||| ||||| ||||||||| ||||||||    
T  37598839 ctaataatttgaaaaaatcaca-aattcagtgtaattataagtgtcg 37598884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 2896181 - 2896140
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgta 131  Q
    |||||| ||||||||||||| ||||||||||||||| |||||    
T  2896181 cgacaccgctaataatttgagaaaatcacataattcagtgta 2896140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 7918263 - 7918226
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  7918263 ctaataatttgagaaaatcacataattcagtgtaatta 7918226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 11605988 - 11605943
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 142  Q
    ||||||||||||||||||||| ||||||| ||| ||||||| ||||    
T  11605988 gctaataatttgaaaaaatcatataattcagtgaaattacatgtgt 11605943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 19324561 - 19324606
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||| ||| ||||||||| ||||||||||||||| |||||||||    
T  19324561 cgacactgctgataatttgagaaaatcacataattcagtgtaatta 19324606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 25098615 - 25098570
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||| ||| ||||||||| ||||||||||||||| |||||||||    
T  25098615 cgacaccgctgataatttgagaaaatcacataattcagtgtaatta 25098570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 27471619 - 27471574
Alignment:
Q  97 gctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 142  Q
    ||||||||||||| |||| |||||||||| ||||||||||| ||||    
T  27471619 gctaataatttgagaaaagcacataattcagtgtaattacatgtgt 27471574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 29144418 - 29144365
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 143  Q
    |||||| ||||||||||||||||||  | ||||| | |||||||||||||||||    
T  29144418 cgacacagctaataatttgaaaaaaatagataatgcagtgtaattacaagtgtc 29144365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 34298443 - 34298480
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaatta 135  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  34298443 ctaataatttgagaaaatcacataattcagtgtaatta 34298480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 9828051 - 9828087
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaatt 134  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  9828051 ctaataatttgataaaatcacataattcagtgtaatt 9828087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 15323171 - 15323215
Alignment:
Q  99 taataatttgaaaaaatcacataattcggtgtaattacaagtgtc 143  Q
    ||||||||||||||||||||||||||  ||||||||  |||||||    
T  15323171 taataatttgaaaaaatcacataatttagtgtaattgtaagtgtc 15323215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 16297343 - 16297295
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaa 138  Q
    |||||| || |||||| ||||||||||||| ||||| ||||||||||||    
T  16297343 cgacacagcaaataatatgaaaaaatcacaaaattcagtgtaattacaa 16297295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 165
Target Start/End: Complemental strand, 17831591 - 17831518
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtctagtcagtgtcggacac 165  Q
    |||||| ||||||||||||| |||||||||| |||| ||||||| | | |||||  |||  |||||||||||||||    
T  17831591 cgacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtgtc--gtcgtgtcagtgtcggacac 17831518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 522 - 468
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  522 cgacactgctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcg 468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 167
Target Start/End: Complemental strand, 3909 - 3831
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 167  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||||||||||||| |||||  ||  |||||||||||||    
T  3909 cgacacggttaataatttaaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgttggtgtcggacacga 3831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 14537 - 14580
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtg 141  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  14537 ctaataatttgaaaaaatcacataattcagtgtaattacaagtg 14580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 33423 - 33366
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcgtgtc 148  Q
    |||||| ||||||||||||||||||| ||||||||| |||||||||||| |||||||||    
T  33423 cgacacagctaataatttgaaaaaataacataattcagtgtaattacaa-tgtcgtgtc 33366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 46681 - 46735
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| | ||||||||||||||||||||||||||| |||||||||||| |||||    
T  46681 cgacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtcg 46735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 130481 - 130535
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| | ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  130481 cgacacagttaatagtttgaaaaaatcacataattcagtgtaattacaagtgtcg 130535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 17801 - 17755
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||    
T  17801 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 17755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 192309 - 192256
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 143  Q
    |||||| | ||||||||||| ||||| |||||||||||||||||||||||||||    
T  192309 cgacaccgttaataatttgagaaaattacataattcggtgtaattacaagtgtc 192256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 178871 - 178825
Alignment:
Q  98 ctaataatttgaaaaaatca-cataattcggtgtaattacaagtgtc 143  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||    
T  178871 ctaataatttgaaaaaatcatcataattcagtgtaattacaagtgtc 178825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 92806 - 92859
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc 143  Q
    |||||| ||||||||||||| ||||| ||||||||| |||||||||||||||||    
T  92806 cgacaccgctaataatttgagaaaattacataattcagtgtaattacaagtgtc 92859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 123626 - 123681
Alignment:
Q  92 acacggctaataatttgaaaaaa---tcacataattcggtgtaattacaagtgtcg 144  Q
    |||| ||||||||||| ||||||   ||||||||||| ||||||||||||||||||    
T  123626 acacagctaataatttaaaaaaagaatcacataattcagtgtaattacaagtgtcg 123681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 168
Target Start/End: Complemental strand, 8687 - 8616
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacgat 168  Q
    ||||||||||||||| ||||||||||||||| ||||||||| |||| |||||  ||| || |||||||||||    
T  8687 ctaataatttgaaaatatcacataattcggtataattacaaatgtcggtgtcgtgtcggtatcggacacgat 8616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 8797 - 8851
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||||||||||| || |||  ||||||||||||||||||    
T  8797 cgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcg 8851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 70277 - 70331
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| | ||||||||||||||||| ||||||||| ||||||||| ||||||||    
T  70277 cgacacagttaataatttgaaaaaataacataattcagtgtaattataagtgtcg 70331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 23777 - 23823
Alignment:
Q  99 taataatttgaaaa-aatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||    
T  23777 taataatttgaaaaaaatcacataattcagtgtaattacaagtgtcg 23823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 135372 - 135318
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||| | ||||||    
T  135372 cgacactgctaataatttgagaaaatcacataattctgtgtaattatatgtgtcg 135318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 4944 - 4891
Alignment:
Q  90 cgacacggctaataatttgaaaaaa-tcacataattcggtgtaattacaagtgt 142  Q
    |||||| ||||||||||| |||||| ||||||||||| ||||||||||||||||    
T  4944 cgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgt 4891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 7092 - 7040
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 142  Q
    |||||| ||||||||||||||||||| ||||||||  || |||||||||||||    
T  7092 cgacacagctaataatttgaaaaaattacataatttagtataattacaagtgt 7040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 19583 - 19626
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 142  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||    
T  19583 ctaataatttgaaaa-atcacataattcagtgtaattacaagtgt 19626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 63774 - 63826
Alignment:
Q  92 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||| ||||||||||||| ||||| ||||||||| ||| ||||||||||||||    
T  63774 acaccgctaataatttgagaaaattacataattcagtgcaattacaagtgtcg 63826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 53189 - 53233
Alignment:
Q  100 aataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||| ||||||||||||||| ||||||||| ||||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcg 53233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 263430 - 263354
Alignment:
Q  92 acacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacga 167  Q
    |||| ||||||||||||| |||| |||||||||| ||||||||| ||||||| |||||  ||| ||||| |||||||    
T  263430 acactgctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgtcggtgtcagacacga 263354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 165
Target Start/End: Original strand, 71722 - 71800
Alignment:
Q  90 cgacacggctaataatttgaaaa--aatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacac 165  Q
    |||||| ||||||||||||||||  ||||||| ||||| |||||||||| |||||| |||||  ||| |||||||||||    
T  71722 cgacacagctaataatttgaaaaaaaatcacacaattcagtgtaattactagtgtcagtgtcgtgtcggtgtcggacac 71800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Original strand, 1034 - 1076
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaa 132  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||    
T  1034 cgacaccgctaataatttgaaaaaattacataattcagtgtaa 1076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 13407 - 13453
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||| ||||||||||||||| ||| ||||||||| ||||    
T  13407 ctaataatttgagaaaatcacataattcagtgcaattacaagggtcg 13453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 21920 - 21874
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||||||||| ||||||||||||||| ||| ||||||||| ||||    
T  21920 ctaataatttgagaaaatcacataattcagtgcaattacaagggtcg 21874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 241593 - 241647
Alignment:
Q  90 cgacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    |||||| |||||||||||| |||||||||||||||  |||||||||  |||||||    
T  241593 cgacacagctaataatttggaaaaatcacataatttagtgtaattatgagtgtcg 241647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 25827 - 25774
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||| |||||||| || ||||||||||||||  ||||||||| ||||||||    
T  25827 gacacggttaataattagagaaaatcacataatttagtgtaattataagtgtcg 25774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 21043 - 21096
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||||| ||||||||||| |||||||||||| ||||| |||||| | ||||||    
T  21043 gacacggttaataatttgagaaaatcacataagtcggtataattatatgtgtcg 21096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 44584 - 44531
Alignment:
Q  91 gacacggctaataatttgaaaaaatcacataattcggtgtaattacaagtgtcg 144  Q
    ||||| ||||| ||||||| ||||||||||||||| ||||||||| | ||||||    
T  44584 gacaccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcg 44531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 7363 - 7319
Alignment:
Q  98 ctaataatttgaaaaaatcacataattcggtgtaattacaagtgt 142  Q
    ||||||||||| |||||||||||||||  ||||||||| ||||||    
T  7363 ctaataatttggaaaaatcacataatttagtgtaattataagtgt 7319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 168
Target Start/End: Original strand, 23529 - 23589
Alignment:
Q  109 aaaaaatcacataattcggtgtaattacaagtgtc-gtgtctagtcagtgtcggacacgat 168  Q
    ||||||||||||||||| ||||||||| ||||||| |||||   || ||||||||||||||    
T  23529 aaaaaatcacataattcagtgtaattataagtgtcagtgtcgtttcggtgtcggacacgat 23589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University