View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20900_low_10 (Length: 250)
Name: NF20900_low_10
Description: NF20900
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20900_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 25452690 - 25452452
Alignment:
| Q |
1 |
ttgggagaaattggcctaataccttttctcttctgggtacctaaaagtgctgatttttctgtacaagcatcttcttggtgtgaatggatggtatttggta |
100 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25452690 |
ttgggagaaattggcctaataccttttctcttctgcgtacctaaaagtgctgatttttctgtacaagcatcttcttggtgtgaatggatggtatttggta |
25452591 |
T |
|
| Q |
101 |
tactgagtaaaatatgtcagttataccgccagtgaacactcccactgtgtcagtttttggtataaataccaaattttttaactactatagttaatttagg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
25452590 |
tactgagtaaaatatgtcagttataccgccagtgaacactcccactgtgtcagtttttggtataaataccaaaaattttaactactatagttaatttagg |
25452491 |
T |
|
| Q |
201 |
ttccatgcccaaaacatttttctgaaccagtcatttcat |
239 |
Q |
| |
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||||||||||||||||||||||| ||||||||||||||| |
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| T |
25452490 |
ttccatgcccaaaacatttttctcaaccagtcatttcat |
25452452 |
T |
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