View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20901_high_7 (Length: 372)
Name: NF20901_high_7
Description: NF20901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20901_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 323; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 30 - 360
Target Start/End: Complemental strand, 26546925 - 26546595
Alignment:
| Q |
30 |
attataatcaacaaattgagatggcagattcaccatattcaaaggcttaaacttgtcaccagaaagcaagctcaaattcttggaattgatgttaaagagt |
129 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
26546925 |
attataatcaacaaattgagatggcagattcaccatattcaaaggcttaaacttgtcaccagaaagcaagctcaaattcttggaattgatgttgaagagt |
26546826 |
T |
|
| Q |
130 |
agtcccacatcatcaccattattgccatgatatttagaaacgagattcttgcagaacattttcaagaaatcggggttttcaaacaatccagaccaagact |
229 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26546825 |
agtcccacatcatcaccattattaccatgatatttagaaacgagattcttgcagaacattttcaagaaatcggggttttcaaacaatccagaccaagact |
26546726 |
T |
|
| Q |
230 |
tgcgaacagtggaaaaacggttgatagatttaatggggagtttagagagaatggaaaaatgaatgcgttcagttgctttgttctcacttgatggatcggc |
329 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26546725 |
tgcgaacagtggaaaaacggttgatagatttaatggggagtttagagagaatggaaaaatgaatgcgttcagttgctttgttctcacttgatggatcggc |
26546626 |
T |
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| Q |
330 |
cattggaggaaccatcaccttctcagatctc |
360 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
26546625 |
cattggaggaaccatcaccttctcagatctc |
26546595 |
T |
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