View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20902_high_1 (Length: 860)

Name: NF20902_high_1
Description: NF20902
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20902_high_1
NF20902_high_1
[»] chr5 (41 HSPs)
chr5 (1-480)||(5947012-5947496)
chr5 (545-816)||(5947560-5947835)
chr5 (604-748)||(3422278-3422429)
chr5 (595-781)||(27579489-27579678)
chr5 (639-781)||(978090-978235)
chr5 (639-781)||(8086134-8086279)
chr5 (639-781)||(24992242-24992387)
chr5 (639-748)||(33387266-33387378)
chr5 (639-748)||(32017259-32017367)
chr5 (639-738)||(9502731-9502833)
chr5 (639-738)||(14634261-14634363)
chr5 (639-791)||(24916350-24916507)
chr5 (639-781)||(38916354-38916499)
chr5 (672-781)||(39776643-39776752)
chr5 (639-738)||(7224221-7224323)
chr5 (639-781)||(33587573-33587718)
chr5 (639-681)||(898405-898447)
chr5 (639-748)||(6996027-6996138)
chr5 (639-748)||(34112008-34112115)
chr5 (678-778)||(2825267-2825368)
chr5 (641-722)||(17476949-17477030)
chr5 (639-738)||(3472381-3472483)
chr5 (641-751)||(18998730-18998843)
chr5 (639-781)||(30354978-30355123)
chr5 (603-748)||(40156244-40156393)
chr5 (647-748)||(12456752-12456856)
chr5 (639-681)||(30779861-30779903)
chr5 (639-681)||(35641884-35641926)
chr5 (639-679)||(20692487-20692527)
chr5 (696-740)||(31197854-31197898)
chr5 (639-682)||(33550912-33550956)
chr5 (643-675)||(41008156-41008188)
chr5 (639-721)||(9050680-9050765)
chr5 (639-781)||(12007736-12007881)
chr5 (696-750)||(4671253-4671307)
chr5 (639-748)||(11251160-11251272)
chr5 (639-681)||(17354306-17354348)
chr5 (639-681)||(27109804-27109846)
chr5 (639-681)||(35290817-35290859)
chr5 (651-735)||(11761125-11761212)
chr5 (639-751)||(18094185-18094300)
[»] chr4 (61 HSPs)
chr4 (639-781)||(2760834-2760976)
chr4 (639-781)||(2570986-2571131)
chr4 (639-765)||(26125737-26125866)
chr4 (696-779)||(29051699-29051782)
chr4 (639-779)||(17610295-17610438)
chr4 (639-791)||(39307699-39307854)
chr4 (639-791)||(44232181-44232336)
chr4 (678-778)||(56297848-56297948)
chr4 (603-748)||(54330757-54330906)
chr4 (639-796)||(7614613-7614773)
chr4 (639-756)||(29585949-29586068)
chr4 (639-748)||(29830389-29830501)
chr4 (601-740)||(9029514-9029657)
chr4 (603-738)||(12625307-12625446)
chr4 (595-722)||(10550498-10550626)
chr4 (639-738)||(43967779-43967881)
chr4 (639-748)||(52227069-52227180)
chr4 (639-781)||(38416754-38416899)
chr4 (603-748)||(47386353-47386502)
chr4 (639-781)||(55209678-55209823)
chr4 (639-748)||(25296684-25296796)
chr4 (639-748)||(45291878-45291990)
chr4 (639-747)||(19903754-19903865)
chr4 (639-751)||(30446341-30446455)
chr4 (603-738)||(55191880-55192019)
chr4 (641-748)||(27407723-27407835)
chr4 (639-781)||(26169999-26170144)
chr4 (595-725)||(32871419-32871552)
chr4 (639-714)||(34316600-34316675)
chr4 (639-781)||(35380998-35381143)
chr4 (639-681)||(10181092-10181134)
chr4 (638-781)||(12240280-12240427)
chr4 (638-682)||(25633391-25633435)
chr4 (639-738)||(31010270-31010372)
chr4 (639-738)||(50205799-50205901)
chr4 (613-748)||(50620760-50620898)
chr4 (681-748)||(3037026-3037093)
chr4 (639-690)||(5390329-5390380)
chr4 (603-681)||(25918319-25918398)
chr4 (639-690)||(30868874-30868925)
chr4 (696-791)||(36523132-36523227)
chr4 (648-719)||(56042573-56042644)
chr4 (639-681)||(17446737-17446779)
chr4 (639-681)||(20651525-20651567)
chr4 (639-748)||(20875351-20875463)
chr4 (639-796)||(23360176-23360330)
chr4 (639-681)||(27976685-27976727)
chr4 (597-675)||(53816456-53816534)
chr4 (697-778)||(56079998-56080079)
chr4 (639-690)||(9965509-9965560)
chr4 (696-743)||(14144621-14144668)
chr4 (645-749)||(50815006-50815114)
chr4 (603-751)||(4467587-4467738)
chr4 (639-681)||(19433462-19433504)
chr4 (639-681)||(27977784-27977826)
chr4 (696-738)||(34652211-34652253)
chr4 (696-779)||(51355202-51355287)
chr4 (639-681)||(55190829-55190871)
chr4 (656-732)||(25101782-25101856)
chr4 (696-781)||(35686386-35686471)
chr4 (678-779)||(38721352-38721453)
[»] chr6 (33 HSPs)
chr6 (678-781)||(15337501-15337604)
chr6 (639-779)||(3623817-3623956)
chr6 (641-748)||(4440896-4441006)
chr6 (603-781)||(22054785-22054967)
chr6 (639-781)||(32414783-32414928)
chr6 (603-803)||(18668755-18668959)
chr6 (639-738)||(6563282-6563384)
chr6 (603-736)||(1040882-1041019)
chr6 (639-741)||(2360043-2360148)
chr6 (639-781)||(4147944-4148089)
chr6 (639-781)||(17257755-17257900)
chr6 (639-781)||(19088062-19088207)
chr6 (639-748)||(24624045-24624157)
chr6 (672-781)||(31869721-31869830)
chr6 (639-738)||(20226402-20226504)
chr6 (639-738)||(22120386-22120488)
chr6 (603-781)||(28477766-28477948)
chr6 (603-781)||(29790219-29790401)
chr6 (641-748)||(19240701-19240808)
chr6 (639-781)||(32671829-32671974)
chr6 (601-681)||(12226091-12226172)
chr6 (639-787)||(17213888-17214039)
chr6 (639-751)||(24955500-24955615)
chr6 (601-748)||(3989330-3989479)
chr6 (677-748)||(10298718-10298789)
chr6 (603-681)||(10520584-10520663)
chr6 (639-781)||(15383034-15383179)
chr6 (639-690)||(17417628-17417679)
chr6 (639-681)||(25475917-25475959)
chr6 (647-692)||(3410495-3410540)
chr6 (601-681)||(16192947-16193028)
chr6 (603-679)||(21540696-21540773)
chr6 (696-741)||(23158073-23158118)
[»] chr1 (43 HSPs)
chr1 (639-748)||(6766418-6766527)
chr1 (639-796)||(36757590-36757750)
chr1 (639-797)||(11641171-11641332)
chr1 (639-781)||(16120544-16120689)
chr1 (639-748)||(30003579-30003691)
chr1 (603-781)||(38153344-38153526)
chr1 (639-781)||(6402514-6402659)
chr1 (639-749)||(9342749-9342862)
chr1 (603-736)||(27292698-27292835)
chr1 (639-781)||(40771876-40772021)
chr1 (639-748)||(17306000-17306112)
chr1 (639-751)||(40800491-40800606)
chr1 (639-748)||(40977592-40977704)
chr1 (639-748)||(42788646-42788758)
chr1 (647-748)||(30385260-30385361)
chr1 (639-791)||(36399101-36399256)
chr1 (639-738)||(4302174-4302273)
chr1 (603-748)||(26910122-26910271)
chr1 (639-748)||(42735269-42735384)
chr1 (639-748)||(30701764-30701876)
chr1 (647-779)||(3485319-3485454)
chr1 (607-749)||(9881321-9881467)
chr1 (643-781)||(15382533-15382675)
chr1 (639-753)||(48375043-48375161)
chr1 (639-681)||(2246655-2246697)
chr1 (639-681)||(23330556-23330598)
chr1 (639-681)||(23435679-23435721)
chr1 (696-746)||(34634955-34635005)
chr1 (639-748)||(52024072-52024184)
chr1 (639-777)||(323930-324073)
chr1 (639-736)||(24321317-24321419)
chr1 (647-796)||(27984554-27984702)
chr1 (696-781)||(28030845-28030930)
chr1 (698-778)||(16689840-16689920)
chr1 (603-748)||(42367363-42367512)
chr1 (639-690)||(3088902-3088953)
chr1 (696-779)||(44644519-44644602)
chr1 (639-681)||(4605103-4605145)
chr1 (639-681)||(23569789-23569831)
chr1 (639-681)||(27580980-27581022)
chr1 (639-681)||(30005718-30005760)
chr1 (639-681)||(31049723-31049765)
chr1 (678-779)||(44647859-44647960)
[»] chr8 (35 HSPs)
chr8 (603-791)||(18044428-18044620)
chr8 (603-781)||(32998463-32998644)
chr8 (603-781)||(14237293-14237475)
chr8 (639-781)||(616796-616941)
chr8 (639-781)||(623189-623334)
chr8 (639-781)||(40494397-40494542)
chr8 (603-748)||(41263856-41264005)
chr8 (604-748)||(5878362-5878510)
chr8 (639-736)||(38957228-38957328)
chr8 (597-781)||(42587309-42587497)
chr8 (603-748)||(132063-132212)
chr8 (603-738)||(2766115-2766254)
chr8 (639-781)||(8394359-8394504)
chr8 (643-725)||(18090397-18090482)
chr8 (653-735)||(11162380-11162461)
chr8 (639-746)||(3370360-3370470)
chr8 (696-748)||(33700237-33700289)
chr8 (639-781)||(13216825-13216970)
chr8 (639-748)||(36641962-36642075)
chr8 (643-736)||(3100603-3100699)
chr8 (639-681)||(38958865-38958907)
chr8 (647-688)||(35303240-35303281)
chr8 (644-724)||(40716632-40716715)
chr8 (653-748)||(4270210-4270308)
chr8 (639-670)||(3383513-3383544)
chr8 (639-725)||(9632224-9632313)
chr8 (639-682)||(24524202-24524245)
chr8 (601-748)||(32779997-32780144)
chr8 (639-709)||(32855566-32855639)
chr8 (649-688)||(35595530-35595569)
chr8 (639-681)||(11637898-11637940)
chr8 (639-681)||(14522484-14522526)
chr8 (639-681)||(22489377-22489419)
chr8 (731-772)||(3448180-3448221)
chr8 (647-748)||(43950322-43950422)
[»] chr3 (38 HSPs)
chr3 (647-781)||(41252878-41253012)
chr3 (639-741)||(3430381-3430483)
chr3 (595-748)||(25527450-25527604)
chr3 (604-738)||(33415855-33415993)
chr3 (639-781)||(13499439-13499584)
chr3 (639-781)||(42490300-42490445)
chr3 (639-781)||(42761587-42761732)
chr3 (639-748)||(27334835-27334947)
chr3 (639-748)||(39866245-39866357)
chr3 (639-781)||(6910347-6910492)
chr3 (639-781)||(27010578-27010723)
chr3 (639-748)||(20765242-20765354)
chr3 (639-748)||(30213850-30213962)
chr3 (639-779)||(15332910-15333053)
chr3 (638-746)||(23940468-23940576)
chr3 (639-748)||(21005339-21005451)
chr3 (639-744)||(41943264-41943372)
chr3 (639-781)||(33803534-33803680)
chr3 (639-738)||(36227601-36227703)
chr3 (696-748)||(44561830-44561882)
chr3 (639-781)||(21797569-21797714)
chr3 (641-751)||(30057342-30057455)
chr3 (603-681)||(32220949-32221028)
chr3 (639-779)||(3020305-3020445)
chr3 (639-721)||(37766125-37766207)
chr3 (639-748)||(41751514-41751626)
chr3 (598-690)||(20549003-20549096)
chr3 (696-748)||(27813452-27813504)
chr3 (672-748)||(43581031-43581106)
chr3 (603-681)||(43467809-43467888)
chr3 (684-778)||(3017807-3017901)
chr3 (639-681)||(10437386-10437428)
chr3 (605-687)||(20110482-20110564)
chr3 (624-681)||(20395635-20395693)
chr3 (639-677)||(33128023-33128061)
chr3 (639-681)||(43181459-43181501)
chr3 (597-781)||(54507654-54507842)
chr3 (668-748)||(47164588-47164669)
[»] chr7 (48 HSPs)
chr7 (595-781)||(3785533-3785723)
chr7 (603-781)||(20885116-20885298)
chr7 (639-781)||(7438916-7439061)
chr7 (639-781)||(28061619-28061764)
chr7 (639-781)||(36623321-36623466)
chr7 (639-781)||(38851951-38852096)
chr7 (639-781)||(47156040-47156185)
chr7 (603-787)||(41088594-41088782)
chr7 (639-748)||(7169172-7169281)
chr7 (639-781)||(6766653-6766799)
chr7 (639-738)||(48602492-48602594)
chr7 (639-781)||(32431462-32431607)
chr7 (639-748)||(39130030-39130142)
chr7 (639-748)||(40090022-40090134)
chr7 (639-751)||(30342117-30342232)
chr7 (639-791)||(42890447-42890602)
chr7 (639-751)||(8683861-8683973)
chr7 (603-737)||(16778562-16778700)
chr7 (638-722)||(24423697-24423781)
chr7 (639-779)||(44594627-44594766)
chr7 (639-738)||(46103474-46103576)
chr7 (604-738)||(46479885-46480023)
chr7 (639-781)||(27045512-27045657)
chr7 (639-781)||(41898001-41898146)
chr7 (603-751)||(11502647-11502799)
chr7 (647-709)||(28601583-28601645)
chr7 (603-681)||(36585225-36585303)
chr7 (639-748)||(40256103-40256215)
chr7 (639-748)||(44732058-44732170)
chr7 (639-681)||(45332033-45332075)
chr7 (603-679)||(46321219-46321296)
chr7 (697-781)||(4131668-4131752)
chr7 (639-722)||(21379816-21379902)
chr7 (603-781)||(25566615-25566796)
chr7 (639-781)||(35570153-35570303)
chr7 (678-742)||(38767205-38767269)
chr7 (639-781)||(49101917-49102062)
chr7 (639-681)||(5084941-5084983)
chr7 (696-780)||(16870644-16870728)
chr7 (638-725)||(39278437-39278524)
chr7 (639-681)||(5788481-5788523)
chr7 (639-740)||(42877440-42877544)
chr7 (651-751)||(47525952-47526056)
chr7 (669-738)||(6174892-6174961)
chr7 (639-767)||(24177073-24177202)
chr7 (696-781)||(36341633-36341718)
chr7 (639-689)||(40035469-40035521)
chr7 (597-681)||(41796717-41796802)
[»] chr2 (41 HSPs)
chr2 (678-781)||(11931704-11931807)
chr2 (639-781)||(2183064-2183206)
chr2 (639-748)||(6223112-6223224)
chr2 (639-748)||(13125249-13125361)
chr2 (639-791)||(7608052-7608207)
chr2 (655-781)||(24251973-24252101)
chr2 (639-751)||(36177684-36177797)
chr2 (603-781)||(7799860-7800042)
chr2 (603-781)||(44365170-44365352)
chr2 (639-781)||(5405009-5405154)
chr2 (639-781)||(8042126-8042271)
chr2 (639-791)||(9006887-9007043)
chr2 (696-779)||(16865069-16865152)
chr2 (639-781)||(19141170-19141315)
chr2 (639-748)||(22839031-22839143)
chr2 (696-787)||(43444704-43444795)
chr2 (603-738)||(9172213-9172352)
chr2 (603-738)||(11841660-11841799)
chr2 (639-751)||(38291995-38292110)
chr2 (649-736)||(42133810-42133897)
chr2 (639-737)||(44644927-44645028)
chr2 (639-681)||(32774707-32774749)
chr2 (639-692)||(13398903-13398956)
chr2 (647-709)||(34248560-34248622)
chr2 (604-788)||(36072180-36072368)
chr2 (638-731)||(38839136-38839232)
chr2 (647-689)||(39989920-39989962)
chr2 (643-771)||(32886929-32887060)
chr2 (696-740)||(19262734-19262778)
chr2 (711-783)||(34248337-34248409)
chr2 (639-690)||(5030387-5030438)
chr2 (639-682)||(22701028-22701071)
chr2 (595-681)||(33228504-33228588)
chr2 (603-681)||(36719391-36719470)
chr2 (639-681)||(44283394-44283436)
chr2 (698-751)||(7666133-7666186)
chr2 (656-781)||(9553842-9553965)
chr2 (644-681)||(23886799-23886836)
chr2 (601-681)||(33607488-33607569)
chr2 (657-781)||(39358159-39358286)
chr2 (639-748)||(44563102-44563214)
[»] scaffold0225 (1 HSPs)
scaffold0225 (678-777)||(8979-9078)
[»] scaffold0029 (1 HSPs)
scaffold0029 (678-777)||(138176-138275)
[»] scaffold0595 (1 HSPs)
scaffold0595 (638-748)||(3994-4108)
[»] scaffold0099 (1 HSPs)
scaffold0099 (676-748)||(28796-28868)
[»] scaffold0262 (1 HSPs)
scaffold0262 (678-777)||(22797-22896)
[»] scaffold0022 (1 HSPs)
scaffold0022 (603-748)||(100714-100863)
[»] scaffold0056 (1 HSPs)
scaffold0056 (639-787)||(70968-71118)
[»] scaffold0009 (1 HSPs)
scaffold0009 (639-739)||(53524-53627)
[»] scaffold0018 (1 HSPs)
scaffold0018 (639-738)||(67873-67975)
[»] scaffold0111 (1 HSPs)
scaffold0111 (639-676)||(38480-38517)


Alignment Details
Target: chr5 (Bit Score: 399; Significance: 0; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 1 - 480
Target Start/End: Original strand, 5947012 - 5947496
Alignment:
Q  1 aaaacagtgcaaaaacatgagcattggaaattaaacagagagatctgaaaatggagttttcattgatgcaacagattgaggtgatttgtaaacaatgcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5947012 aaaacagtgcaaaaacatgagcattggaaattaaacagagagatctgaaaatggagttttcattgatgcaacagattgaggtgatttgtaaacaatgcag 5947111  T
Q  101 aagcatgatagcggcgttgatacaagaaatgaaaaacgaatgagaagtggatcgcttaccggcgacg------gtggaagtaattttccgatctgtttcg 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||||||||    
T  5947112 aagcatgatagcggcgttgatacaagaaatgaaaaacgaatgagaagtggatcgcttaccggcgacggtgacggtggaagtaattttccgatctgtttcg 5947211  T
Q  195 gagggaataacggttttttgaacggaaaagaaagcgtgtgagatttgcagagattgagattcggatcaatgtaggttcatttgattagagtgtagagtca 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5947212 gagggaataacggttttttgaacggaaaagaaagcgtgtgagatttgcagagattgaaattcggatcaatgtaggttcatttgattagagtgtagagtca 5947311  T
Q  295 ccggcacggaacagagtgcttgcaattttagagaatgaacgaaacaatattcatatgcttacttatttcataatccatcgcnnnnnnnnnnnnnnnnngg 394  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                 ||    
T  5947312 ccggcacggaacagagggcttgcaattttagagaatgaacgaaacaatattcatatgcttacttatttcataatccatcgc-ttttttttttttttttgg 5947410  T
Q  395 tcaagatcataatccatcactttatccattgagctaaaaattaggacatgcgatgaaagttaactcaaattcagtaaggtaatttg 480  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5947411 tcaagatcataatccatcactttatccattgagctaaaaattaggacatgcgatgaaagttaactcaaattcagtaaggtaatttg 5947496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 545 - 816
Target Start/End: Original strand, 5947560 - 5947835
Alignment:
Q  545 ccctctattttaaaatatacgtcgtagtcaactaattcacacatgtcaacac----ttttatcgttaatatatttagttatctatggtaaaggattgtaa 640  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||    ||||||||||||||||||||| ||||||||||||| ||||||||    
T  5947560 ccctctattttaaaatatacgtcgtagtcaactaattcacacatgtcaatacataattttatcgttaatatatttagctatctatggtaaaagattgtaa 5947659  T
Q  641 aatttaatattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagtta 740  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5947660 aatttaatattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagtta 5947759  T
Q  741 tgtgaataatgtatatcgtgaaaatgtgacatgtattttgagatggatggattatatgattaatcattgttttaat 816  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  5947760 tgtgaataatgtatatcgtgaaaatgtgacatgtattttaaaatggatggattatatgattaatcattgttttaat 5947835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 604 - 748
Target Start/End: Original strand, 3422278 - 3422429
Alignment:
Q  604 gttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagattt 699  Q
    |||||||| |||| |||||| |||||||  ||| ||||| |||||||||||||||||||||||||||||||||||   ||||| ||| ||||| | ||||    
T  3422278 gttaatatctttaattatctgtggtaaaaaattataaaaatttaatattttaaaaatatttatcaagacaaatcaatcaacatcttacatgctaacattt 3422377  T
Q  700 gtatttatatgttagct---aaaaaatattgtcaaagtaagttatgtgaata 748  Q
    |||||||||| |||| |   ||||||||| ||||||||||||||||||||||    
T  3422378 gtatttatatattagttaaaaaaaaatatagtcaaagtaagttatgtgaata 3422429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 595 - 781
Target Start/End: Original strand, 27579489 - 27579678
Alignment:
Q  595 acttttatcgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaac---attttatatg 690  Q
    ||||| ||||||||||| |||| |||||||  |||||  ||| ||||| ||||||||||| ||||||||| |  ||||||||||||    || ||| |||    
T  27579489 actttgatcgttaatatctttaattatctaaagtaaaaaattataaaaatttaatattttgaaaatatttgttgagacaaatcaaattatatcttacatg 27579588  T
Q  691 cttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    || | |||||||||||||| |||| |||||||||| || ||||||||| || ||||||||  | |||   |||||||||||||||||||||    
T  27579589 ctaacatttgtatttatatattagttaaaaaatatagttaaagtaagtcat-tgaataatacacatcacaaaaatgtgacatgtattttga 27579678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 639 - 781
Target Start/End: Complemental strand, 978235 - 978090
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||||||   | ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  978235 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 978136  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| | ||||||| || | || |  |||||  ||||||||||||||    
T  978135 agtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 978090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 8086134 - 8086279
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||||||||||||| || ||||||||||||||   | ||| ||| | | |||||||||||||| |||| |||||| ||| |||||||||    
T  8086134 aaaatttaatattttaaaaatatttgtcgagacaaatcaaacaacatcttacatgttaatatttgtatttatatattagttaaaaagtatagtcaaagta 8086233  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| | ||||||| || | || |  |||||  ||||||||||||||    
T  8086234 agtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 8086279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 24992242 - 24992387
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    |||||||  |||||| |||||||| ||  ||||||||||||||   | ||||||||| | |||||||||||||  |||| |||||||||| |||||||||    
T  24992242 aaaatttggtattttgaaaatattcattgagacaaatcaaacaacatcttatatgctaatatttgtatttataaattagttaaaaaatatggtcaaagta 24992341  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    || |||||||||| || | || || ||| | |||||||||||||||    
T  24992342 agctatgtgaatagtgcacattgtaaaactatgacatgtattttga 24992387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 639 - 748
Target Start/End: Complemental strand, 33387378 - 33387266
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||||||   | ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  33387378 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatagtcaaagta 33387279  T
Q  736 agttatgtgaata 748  Q
    ||| | |||||||    
T  33387278 agtcaagtgaata 33387266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 639 - 748
Target Start/End: Complemental strand, 32017367 - 32017259
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagt 738  Q
    ||||||| ||||||| ||||||||  |  ||||||||||| ||| ||| ||||| | |||||||||||||| |||| ||||||||||  |||||||||||    
T  32017367 aaaatttgatattttgaaaatattcgtttagacaaatcaa-catcttacatgctaacatttgtatttatatattagttaaaaaatatgatcaaagtaagt 32017269  T
Q  739 tatgtgaata 748  Q
    ||||||||||    
T  32017268 tatgtgaata 32017259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 639 - 738
Target Start/End: Original strand, 9502731 - 9502833
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  9502731 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 9502830  T
Q  736 agt 738  Q
    |||    
T  9502831 agt 9502833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 639 - 738
Target Start/End: Original strand, 14634261 - 14634363
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  14634261 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatagtcaaagta 14634360  T
Q  736 agt 738  Q
    |||    
T  14634361 agt 14634363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 639 - 791
Target Start/End: Original strand, 24916350 - 24916507
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaa--tattgtcaaag 733  Q
    ||||||| ||||||| |||||||| ||  ||||||||||||||   | ||||||||| | |||||||||||||  |||| |||||||  ||| |||||||    
T  24916350 aaaatttgatattttgaaaatattcattgagacaaatcaaacaacatcttatatgctaatatttgtatttataaattagttaaaaaaaatatggtcaaag 24916449  T
Q  734 taagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttgagatggatgga 791  Q
    |||| |||||||||| |  | || || ||| ||||||||||||||||| | |||||||    
T  24916450 taagctatgtgaatagtacacattgtaaaattgtgacatgtattttgaaacggatgga 24916507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 38916354 - 38916499
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaa---cattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    |||||||||||||||  ||||||||||| | ||||||| ||   ||| | | ||||| | ||||||||||||||||||| |||||| ||| ||||||| |    
T  38916354 aaaatttaatattttgtaaatatttatcgaaacaaatcgaataacatctcacatgctaacatttgtatttatatgttagttaaaaagtatggtcaaagca 38916453  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| ||||||||| || |||  |  |||||| ||||||||||||||    
T  38916454 agtcatgtgaatagtgcatactgcaaaaatgcgacatgtattttga 38916499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 672 - 781
Target Start/End: Complemental strand, 39776752 - 39776643
Alignment:
Q  672 aaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgaca 771  Q
    ||||| ||||||||| ||||| | ||||||||||||||||||| |||||| ||  |||||| ||||||||||||||| |||| || |  |||||  || |    
T  39776752 aaatcgaacattttacatgctaatatttgtatttatatgttagttaaaaagtacggtcaaaataagttatgtgaatagtgtacattgcaaaaatacgaaa 39776653  T
Q  772 tgtattttga 781  Q
    ||||||||||    
T  39776652 tgtattttga 39776643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 639 - 738
Target Start/End: Complemental strand, 7224323 - 7224221
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||||||| ||||| | |||||||||||||  |||| || ||| ||| |||||||||    
T  7224323 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacattttacatgctaatatttgtatttataaattagttagaaagtatggtcaaagta 7224224  T
Q  736 agt 738  Q
    |||    
T  7224223 agt 7224221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 33587573 - 33587718
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| |  ||||||||||||||   | ||| ||| | | |||||||||||||  |||| |||||||||| |||||||||    
T  33587573 aaaatttaatattttgaaaatatttgttgagacaaatcaaacaacatcttacatgttaatatttgtatttatagattagttaaaaaatatggtcaaagta 33587672  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| |  ||||||||| | || |  |||||  ||||||||||||||    
T  33587673 agtcaaatgaataatgcacattgcaaaaattggacatgtattttga 33587718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 639 - 681
Target Start/End: Original strand, 898405 - 898447
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  898405 aaaatttgatattttaaaaatatttatcaagacaaatcaaaca 898447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 639 - 748
Target Start/End: Complemental strand, 6996138 - 6996027
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaac---attttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||| ||||||| |||||||| ||| |||||||||||||   |||||| ||| | | |||| ||||||||| |||| |||||||||| || ||| ||    
T  6996138 aaaatttgatattttgaaaatattcatcgagacaaatcaaacaatattttacatggtaacatttatatttatatattagttaaaaaatatagttaaa-ta 6996040  T
Q  736 agttatgtgaata 748  Q
    |||||||||||||    
T  6996039 agttatgtgaata 6996027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 639 - 748
Target Start/End: Complemental strand, 34112115 - 34112008
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagt 738  Q
    ||||||||||||||| ||||||||| || |||||||||||  || ||| ||| | | |||||||||||||  ||||  ||||||||| ||||||||||||    
T  34112115 aaaatttaatattttgaaaatatttgtcgagacaaatcaa--atcttacatgataatatttgtatttatagattagtaaaaaaatatagtcaaagtaagt 34112018  T
Q  739 tatgtgaata 748  Q
     | |||||||    
T  34112017 caagtgaata 34112008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 678 - 778
Target Start/End: Original strand, 2825267 - 2825368
Alignment:
Q  678 aacattttatatgcttagatttgtatttatatgttagctaaaa-aatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtat 776  Q
    ||||| ||||||||| | |||| ||||||||| |||   |||| |||||| |||||||||||||||||||||||| |||| || |||||| || ||||||    
T  2825267 aacatcttatatgctaacatttctatttatatattaatgaaaataatattatcaaagtaagttatgtgaataatgcatattgtcaaaatgcgatatgtat 2825366  T
Q  777 tt 778  Q
    ||    
T  2825367 tt 2825368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 641 - 722
Target Start/End: Complemental strand, 17477030 - 17476949
Alignment:
Q  641 aatttaatattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaaa 722  Q
    ||||| ||||||| |||||||||   |||||||||||||||| |||||| || | |||||||||||||| |||| |||||||    
T  17477030 aatttgatattttgaaaatattttataagacaaatcaaacatcttatatactaacatttgtatttatatattagttaaaaaa 17476949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 639 - 738
Target Start/End: Original strand, 3472381 - 3472483
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| ||  |||||||||   ||||| ||| ||||| | ||||||||||||   |||| |||||||||| |||||||||    
T  3472381 aaaatttaatattttgaaaatatttgtcgcgacaaatcaaacaacatcttacatgctaatatttgtatttattcattagttaaaaaatatggtcaaagta 3472480  T
Q  736 agt 738  Q
    |||    
T  3472481 agt 3472483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 641 - 751
Target Start/End: Complemental strand, 18998843 - 18998730
Alignment:
Q  641 aatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaag 737  Q
    ||||| ||||||| |||||||| ||| | ||||||||||||   | ||| || || | |||||||||||||| |||| |||||||||| || |||||||     
T  18998843 aatttgatattttgaaaatattcatcgaaacaaatcaaacaacatcttacatactaacatttgtatttatatattagttaaaaaatatggttaaagtaaa 18998744  T
Q  738 ttatgtgaataatg 751  Q
     |||||||||||||    
T  18998743 ctatgtgaataatg 18998730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 30354978 - 30355123
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || |||||||| |   ||||| ||| ||||| | |||||||||||||| |||| |||||  ||| || ||||||    
T  30354978 aaaatttaatattttgaaaatatttgtcgagacaaattaaacaacatcttacatgctaatatttgtatttatatattagttaaaatgtatggttaaagta 30355077  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    | | | ||||||| || |||| |  |||||  ||||||||||||||    
T  30355078 aatcaagtgaatagtgcatattgcaaaaattggacatgtattttga 30355123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 603 - 748
Target Start/End: Complemental strand, 40156393 - 40156244
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatt 698  Q
    ||||||||| |||| |||||||  |||||  ||| ||||| ||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||    
T  40156393 cgttaatatctttaattatctaaagtaaaaaattataaaaatttaatatttttaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatt 40156294  T
Q  699 tgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaata 748  Q
    ||||||||||  |||  |||||| ||| || ||||||||| | |||||||    
T  40156293 tgtatttatacattaattaaaaattatggtaaaagtaagtcaagtgaata 40156244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 647 - 748
Target Start/End: Original strand, 12456752 - 12456856
Alignment:
Q  647 atattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgt 743  Q
    ||||||| ||||||| |||||||||||||||||||   | ||| || || | |||||||||| ||| |||| ||||||||||  | ||||||||||||||    
T  12456752 atattttgaaaatatgtatcaagacaaatcaaacaacatcttacatactaacatttgtatttgtatattagttaaaaaatatgattaaagtaagttatgt 12456851  T
Q  744 gaata 748  Q
     ||||    
T  12456852 aaata 12456856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 639 - 681
Target Start/End: Complemental strand, 30779903 - 30779861
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    |||||||||||||||||||||||| ||||||||||||| ||||    
T  30779903 aaaatttaatattttaaaaatattcatcaagacaaatccaaca 30779861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 639 - 681
Target Start/End: Complemental strand, 35641926 - 35641884
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    |||||||||||||||||||||||||||| ||||||||| ||||    
T  35641926 aaaatttaatattttaaaaatatttatcgagacaaatccaaca 35641884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 639 - 679
Target Start/End: Original strand, 20692487 - 20692527
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaa 679  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  20692487 aaaatttaatattttaaatatatttatcgagacaaatcaaa 20692527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 696 - 740
Target Start/End: Original strand, 31197854 - 31197898
Alignment:
Q  696 atttgtatttatatgttagctaaaaaatattgtcaaagtaagtta 740  Q
    |||||||||||||| |||| |||||| ||||||||||||||||||    
T  31197854 atttgtatttatattttagttaaaaattattgtcaaagtaagtta 31197898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 639 - 682
Target Start/End: Original strand, 33550912 - 33550956
Alignment:
Q  639 aaaatttaatattttaaaaatattt-atcaagacaaatcaaacat 682  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  33550912 aaaatttaatattttgaaaatattttatcaagacaaatcaaacat 33550956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 643 - 675
Target Start/End: Original strand, 41008156 - 41008188
Alignment:
Q  643 tttaatattttaaaaatatttatcaagacaaat 675  Q
    |||||||||||||||||||||||||||||||||    
T  41008156 tttaatattttaaaaatatttatcaagacaaat 41008188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 639 - 721
Target Start/End: Original strand, 9050680 - 9050765
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaa 721  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||  |||| ||||||    
T  9050680 aaaatttaatattttgaaaatatttttcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaa 9050765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 12007736 - 12007881
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || | ||||||||   ||||||||| |||||   |||||||||||||| |||  |||||| ||  |||||| ||    
T  12007736 aaaatttaatattttgaaaatatttgtcgaaacaaatcaaacaacattttacatgctagcatttgtatttatatattaattaaaaagtagggtcaaatta 12007835  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| |||| |||| || | |   | |||||| ||||||||||||||    
T  12007836 agtcatgtaaatagtgcacaatataaaaatgcgacatgtattttga 12007881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 696 - 750
Target Start/End: Complemental strand, 4671307 - 4671253
Alignment:
Q  696 atttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataat 750  Q
    |||||||||||||| | || ||||||||||   ||||||||||||||||||||||    
T  4671307 atttgtatttatatatcagttaaaaaatatgaacaaagtaagttatgtgaataat 4671253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 639 - 748
Target Start/End: Complemental strand, 11251272 - 11251160
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||| ||||||   |||||  || ||||| | |||||||||||||  |||| |||||| ||| |||||| ||    
T  11251272 aaaatttaatattttgaaaatatttgtcgagataaatcaaataacatcgtacatgctaatatttgtatttatacattagttaaaaagtatggtcaaaata 11251173  T
Q  736 agttatgtgaata 748  Q
    ||| | |||||||    
T  11251172 agtcaagtgaata 11251160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 639 - 681
Target Start/End: Complemental strand, 17354348 - 17354306
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    |||| |||||||||||||||||||||||||| | |||||||||    
T  17354348 aaaaattaatattttaaaaatatttatcaagtcgaatcaaaca 17354306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 639 - 681
Target Start/End: Complemental strand, 27109846 - 27109804
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    ||||||||||||||| ||||||||| || ||||||||||||||    
T  27109846 aaaatttaatattttgaaaatatttgtcgagacaaatcaaaca 27109804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 639 - 681
Target Start/End: Complemental strand, 35290859 - 35290817
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||    
T  35290859 aaaatttaatattttgaaaatatttatcgagacaaatcgaaca 35290817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 651 - 735
Target Start/End: Complemental strand, 11761212 - 11761125
Alignment:
Q  651 tttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    |||||||||||| ||  ||||||||||||||   | ||| ||| | | |||||||||||||| |||| |||||||||| |||||||||    
T  11761212 tttaaaaatattgattgagacaaatcaaacaacatcttacatgttaatatttgtatttatatattagttaaaaaatatggtcaaagta 11761125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 639 - 751
Target Start/End: Original strand, 18094185 - 18094300
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||| ||||||| |||||| || || ||||||| ||||||   | ||| ||||| | |||||||||||||  |||| |||||| |||  | ||||||    
T  18094185 aaaattttatattttgaaaatacttgtcgagacaaaccaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtataattaaagta 18094284  T
Q  736 agttatgtgaataatg 751  Q
    ||||| ||||||||||    
T  18094285 agttaagtgaataatg 18094300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 6e-27; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 2760834 - 2760976
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagt 738  Q
    ||||||||||||||  ||||||||| || ||||||||||||||| ||| ||||| | |||||||||||||| |||| |||||||||| ||||||||||||    
T  2760834 aaaatttaatatttcgaaaatatttgtcgagacaaatcaaacatcttacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagt 2760933  T
Q  739 tatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
     | ||||||| || | || || |||||  ||||||||||||||    
T  2760934 caagtgaatagtgcacattgtaaaaattggacatgtattttga 2760976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 2570986 - 2571131
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaac---attttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||||||||||||| |  ||||||||||||    || ||| ||||| | |||||||||||||| |||| |||||||||| |||||| ||    
T  2570986 aaaatttaatattttaaaaatatttgttgagacaaatcaaattatatcttacatgctaacatttgtatttatatattagttaaaaaatatagtcaaaata 2571085  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    | | |||||||||||| | ||  | |||||||||||||||||||||    
T  2571086 aatcatgtgaataatgcacattataaaaatgtgacatgtattttga 2571131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 639 - 765
Target Start/End: Complemental strand, 26125866 - 26125737
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||||||   | ||| ||||| | |||||||||||||  |||| |||||||||| |||||||||    
T  26125866 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagta 26125767  T
Q  736 agttatgtgaataatgtatatcgtgaaaat 765  Q
    ||| | |||||||||| |||| || |||||    
T  26125766 agtcaagtgaataatgcatattgtaaaaat 26125737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 696 - 779
Target Start/End: Complemental strand, 29051782 - 29051699
Alignment:
Q  696 atttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtatttt 779  Q
    |||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||| || ||| ||  |||||||||||    
T  29051782 atttgtatttatatattagttaaaaaatatggtcaaagtaagttatgtgaataatgtatattgtaaaattgcaacatgtatttt 29051699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 639 - 779
Target Start/End: Complemental strand, 17610438 - 17610295
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || |||||||| |||||   | ||| ||||| | |||||||||||||  ||||||||||||||| |||||||||    
T  17610438 aaaatttaatattttgaaaatatttgtcgagacaaattaaacaacatcttacatgctaatatttgtatttatacattagctaaaaaatatggtcaaagta 17610339  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtatttt 779  Q
    ||| | ||||||| || |||| |  |||||  ||||||||||||    
T  17610338 agtcaagtgaatagtgcatattgcaaaaattggacatgtatttt 17610295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 639 - 791
Target Start/End: Complemental strand, 39307854 - 39307699
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||||||||||||| |  |||||||| |||||   ||||| || || | |||||||||||||| |||| |||||| ||   ||||||||    
T  39307854 aaaatttaatattttaaaaatatttgttgagacaaattaaacaacattttacatactaacatttgtatttatatattagttaaaaagtagcatcaaagta 39307755  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttgagatggatgga 791  Q
    ||| |||||||||  |||||| |  |||||| |||||||||||||| | |||||||    
T  39307754 agtcatgtgaatagggtatattgcaaaaatgcgacatgtattttgaaacggatgga 39307699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 639 - 791
Target Start/End: Original strand, 44232181 - 44232336
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  44232181 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 44232280  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttgagatggatgga 791  Q
    ||| | ||||||| || | || |  |||||  |||||||||||||| | |||||||    
T  44232281 agtcaagtgaatagtgcacattgcaaaaattagacatgtattttgaaacggatgga 44232336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 678 - 778
Target Start/End: Original strand, 56297848 - 56297948
Alignment:
Q  678 aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtatt 777  Q
    ||||||||||||||| | |||||||||||||| |||| ||| |||||| ||||||  ||||||||||||||||||| || || |||||  ||||||||||    
T  56297848 aacattttatatgctaacatttgtatttatatattagttaataaatatggtcaaaacaagttatgtgaataatgtacattgtaaaaatacgacatgtatt 56297947  T
Q  778 t 778  Q
    |    
T  56297948 t 56297948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 603 - 748
Target Start/End: Original strand, 54330757 - 54330906
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatt 698  Q
    |||||||||||||| |||||||  |||||  ||| ||||| ||||||||||| ||||||||| || ||| ||||||||||   | ||| ||||| | |||    
T  54330757 cgttaatatatttaattatctaaagtaaaaaattataaaaatttaatattttgaaaatatttgtcgagataaatcaaacaacatcttacatgctaatatt 54330856  T
Q  699 tgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaata 748  Q
    ||||||||||| |||| |||||| ||| |||||||||||| | |||||||    
T  54330857 tgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaata 54330906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 639 - 796
Target Start/End: Complemental strand, 7614773 - 7614613
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||| ||||||| |||||||| ||| | || |||||||||   | ||| ||||| | |||||||||||||| |||| |||||||||| |||||| ||    
T  7614773 aaaatttgatattttgaaaatattcatcgaaacgaatcaaacaacatcttacatgctaacatttgtatttatatattagttaaaaaatatggtcaaaata 7614674  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttgagatggatggattata 796  Q
    ||| |||||| |||| ||||| || ||| |  |||||||||||||| | ||||||| ||||    
T  7614673 agtcatgtgattaatatatattgtaaaattacgacatgtattttgaaacggatggagtata 7614613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 639 - 756
Target Start/End: Original strand, 29585949 - 29586068
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaa---cattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||| |||||||||||||||||||  ||| ||||||||   ||||||| ||| | | ||||||||||| || |||  |||||||||| |||||||||    
T  29585949 aaaatttgatattttaaaaatatttattgagataaatcaaaaaacattttacatgttaacatttgtatttacatattaattaaaaaatat-gtcaaagta 29586047  T
Q  736 agttatgtgaataatgtatat 756  Q
    ||||||||||||| |||||||    
T  29586048 agttatgtgaatagtgtatat 29586068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 639 - 748
Target Start/End: Complemental strand, 29830501 - 29830389
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||||||   | ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  29830501 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 29830402  T
Q  736 agttatgtgaata 748  Q
    ||| | |||||||    
T  29830401 agtcaagtgaata 29830389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 601 - 740
Target Start/End: Original strand, 9029514 - 9029657
Alignment:
Q  601 atcgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaac---attttatatgcttaga 696  Q
    ||||||||||| |||| |||||||  |||||  ||| ||||| ||||||||||||||||||||| || |||||||||||||   || |||  |||| | |    
T  9029514 atcgttaatatctttaattatctaaagtaaaaaattataaaaatttaatattttaaaaatatttgtcgagacaaatcaaacaatatcttacgtgctaata 9029613  T
Q  697 tttgtatttatatgttagctaaaaaatattgtcaaagtaagtta 740  Q
    ||||||||||||  |||| |||||| ||| ||||||||||||||    
T  9029614 tttgtatttatacattagttaaaaagtatggtcaaagtaagtta 9029657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 603 - 738
Target Start/End: Complemental strand, 12625446 - 12625307
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatt 698  Q
    |||||||||||||| |||||||  |||||  ||| ||||| |||||||||| |||||||||| || ||||||||||   ||||| ||| ||||| | |||    
T  12625446 cgttaatatatttaattatctaaagtaaaaaattataaaaatttaatatttaaaaaatatttttcgagacaaatcaaacaacatcttacatgctaatatt 12625347  T
Q  699 tgtatttatatgttagctaaaaaatattgtcaaagtaagt 738  Q
    ||||||||||  |||| |||||| ||| ||||||||||||    
T  12625346 tgtatttatacattagttaaaaagtatggtcaaagtaagt 12625307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 595 - 722
Target Start/End: Complemental strand, 10550626 - 10550498
Alignment:
Q  595 acttttatcgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaacattttatatgctt 693  Q
    ||||| ||| |||||||||||| |||| |||  ||||  ||| ||||| ||| |||||||||||||||| ||| ||||||||||||||| ||| |||||     
T  10550626 actttgatcattaatatatttaattatatataataaaaaattataaaaatttgatattttaaaaatattcatcgagacaaatcaaacatcttacatgcta 10550527  T
Q  694 agatttgtatttatatgttagctaaaaaa 722  Q
    | |||| ||||||||| |||| |||||||    
T  10550526 acatttttatttatatattagttaaaaaa 10550498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 639 - 738
Target Start/End: Complemental strand, 43967881 - 43967779
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  43967881 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 43967782  T
Q  736 agt 738  Q
    |||    
T  43967781 agt 43967779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 639 - 748
Target Start/End: Complemental strand, 52227180 - 52227069
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagct--aaaaaatattgtcaaagtaa 736  Q
    ||||||| ||||||| |||||||| ||| |  |||||||| ||| ||||||||| | |||||||||||||| |||| |  |||||||||||||||| |||    
T  52227180 aaaatttgatattttgaaaatattcatcgaatcaaatcaaccatcttatatgctaacatttgtatttatatattagataaaaaaaatattgtcaaaataa 52227081  T
Q  737 gttatgtgaata 748  Q
    | ||||||||||    
T  52227080 gatatgtgaata 52227069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 38416754 - 38416899
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || | ||||||||||||   | ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  38416754 aaaatttaatattttgaaaatatttgtcgacacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 38416853  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| | ||||||| || | || |  |||||  ||||||||||||||    
T  38416854 agtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 38416899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 603 - 748
Target Start/End: Original strand, 47386353 - 47386502
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatt 698  Q
    ||||||||| |||| |||||||  |||||  ||| ||||| ||||||||||| ||||||| | || ||||||||||||||   | ||| ||||| | |||    
T  47386353 cgttaatatctttaattatctaaagtaaaaaattataaaaatttaatattttgaaaatatatgtcgagacaaatcaaacaacatcttacatgctaatatt 47386452  T
Q  699 tgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaata 748  Q
    ||||||||||  |||| |||||||||| |||||||||||| | |||||||    
T  47386453 tgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaata 47386502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 55209678 - 55209823
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  55209678 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 55209777  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    | | | ||||||| || | || |  |||||  ||||||||||||||    
T  55209778 aatcaagtgaatagtgcacattggaaaaattggacatgtattttga 55209823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 639 - 748
Target Start/End: Original strand, 25296684 - 25296796
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||  |||| |||||| ||| |||||||||    
T  25296684 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagta 25296783  T
Q  736 agttatgtgaata 748  Q
    ||| | |||||||    
T  25296784 agtcaagtgaata 25296796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 639 - 748
Target Start/End: Complemental strand, 45291990 - 45291878
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||| |||| |||||| |||  ||||||||    
T  45291990 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatgatcaaagta 45291891  T
Q  736 agttatgtgaata 748  Q
    ||| | |||||||    
T  45291890 agtcaagtgaata 45291878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 639 - 747
Target Start/End: Original strand, 19903754 - 19903865
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaacattttat---atgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||| ||||||| |||||||||||| | |||||||||||| | | |   ||||| | |||||||||||||| |||| ||||| |||| |||||||||    
T  19903754 aaaatttgatattttgaaaatatttatcgaaacaaatcaaacaatatctcacatgctaacatttgtatttatatattagttaaaatatatggtcaaagta 19903853  T
Q  736 agttatgtgaat 747  Q
    | ||||||||||    
T  19903854 aattatgtgaat 19903865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 639 - 751
Target Start/End: Complemental strand, 30446455 - 30446341
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||| | || ||||||||||   ||||||||| | ||| | |||||||||||||| |||| | |||||||  |||||||||    
T  30446455 aaaatttaatattttgaaaatatatgtcgagacaaatcaaacaacattttacaggctaacatttgtatttatatattag-tcaaaaatagggtcaaagta 30446357  T
Q  736 agttatgtgaataatg 751  Q
    ||| ||||||||||||    
T  30446356 agtcatgtgaataatg 30446341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 603 - 738
Target Start/End: Complemental strand, 55192019 - 55191880
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatt 698  Q
    |||||||||||||| |||||||  |||||  ||| ||||| ||||||||||||||||||||| || ||||||||||   ||||||||  ||||| | |||    
T  55192019 cgttaatatatttaattatctaaagtaaaaaattataaaaatttaatattttaaaaatatttgtcgagacaaatcaaacaacattttgcatgctaatatt 55191920  T
Q  699 tgtatttatatgttagctaaaaaatattgtcaaagtaagt 738  Q
    |||||||| |  |||  |||||| ||| ||||||||||||    
T  55191919 tgtatttacacattaattaaaaagtatagtcaaagtaagt 55191880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 641 - 748
Target Start/End: Original strand, 27407723 - 27407835
Alignment:
Q  641 aatttaatattttaaaaatatttatcaagacaaatcaaaca-----ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||||| |||||||| |||||| |||||||     ||  | ||||| | |||||||||||||| |||| |||||| ||  |||||||||    
T  27407723 aatttaatattttaaaagtatttatcgagacaactcaaacaacatcttacacatgctaatatttgtatttatatattagttaaaaagtagggtcaaagta 27407822  T
Q  736 agttatgtgaata 748  Q
    |||||||||||||    
T  27407823 agttatgtgaata 27407835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 639 - 781
Target Start/End: Complemental strand, 26170144 - 26169999
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||  |||| |||||| ||| |||||||||    
T  26170144 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagta 26170045  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    | | | ||||||| || | || |  |||||  ||||||||||||||    
T  26170044 aatcaagtgaatagtgcacattgcaaaaattggacatgtattttga 26169999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 595 - 725
Target Start/End: Original strand, 32871419 - 32871552
Alignment:
Q  595 acttttatcgttaatatatttagttatctatggtaaaggattgtaaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgc 691  Q
    ||||| |||||||||||||||| |||||||  |||||  ||| ||||||||||| |||| ||||||| |||| | ||||||||||||   |  || || |    
T  32871419 actttgatcgttaatatatttaattatctaaagtaaaaaattataaaatttaattttttgaaaatatctatcgaaacaaatcaaacaacatcctacatac 32871518  T
Q  692 ttagatttgtatttatatgttagctaaaaaatat 725  Q
    ||| ||||||||||| || |||| ||||||||||    
T  32871519 ttacatttgtatttacatattagttaaaaaatat 32871552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 639 - 714
Target Start/End: Complemental strand, 34316675 - 34316600
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttag 714  Q
    |||||||||||||||  ||||||||||| | ||||||| ||||| ||||||||| | |||||||||||||| ||||    
T  34316675 aaaatttaatattttgtaaatatttatcgaaacaaatcgaacatcttatatgctaacatttgtatttatatattag 34316600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 35380998 - 35381143
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || | ||| ||||||||   | ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  35380998 aaaatttaatattttgaaaatatttgtcgaaacagatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 35381097  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| |  |||||| || | || || |||||  ||||||||||||||    
T  35381098 agtcaaatgaatagtgcacattgtaaaaattggacatgtattttga 35381143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 639 - 681
Target Start/End: Original strand, 10181092 - 10181134
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  10181092 aaaatttaatattttaaaaatatttatcaagacaaatccaaca 10181134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 638 - 781
Target Start/End: Original strand, 12240280 - 12240427
Alignment:
Q  638 taaaattt-aatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaag 733  Q
    |||||||| |||||||| ||||||||| || ||||||||||||||   | ||| ||||| | |||||||||||||  |||| |||||| ||| |||||||    
T  12240280 taaaatttcaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaag 12240379  T
Q  734 taagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||||| |  |||||| || | || || |||||  ||||||||||||||    
T  12240380 taagtcaaatgaatagtgcacattgtaaaaattggacatgtattttga 12240427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 638 - 682
Target Start/End: Complemental strand, 25633435 - 25633391
Alignment:
Q  638 taaaatttaatattttaaaaatatttatcaagacaaatcaaacat 682  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||    
T  25633435 taaaatttaatattttaaaaatattcatcaaaacaaatcaaacat 25633391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 639 - 738
Target Start/End: Complemental strand, 31010372 - 31010270
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaac---attttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    |||||||||||||||| |||||||| || |||||||||||||   || ||| ||||| | |||| ||||||||  |||| |||||| ||| |||||||||    
T  31010372 aaaatttaatattttagaaatatttgtcgagacaaatcaaacaatatcttacatgctaatatttttatttatacattagttaaaaagtatggtcaaagta 31010273  T
Q  736 agt 738  Q
    |||    
T  31010272 agt 31010270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 639 - 738
Target Start/End: Complemental strand, 50205901 - 50205799
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||||||||||||| || ||| ||||||   ||||| |||   ||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  50205901 aaaatttaatattttaaaaatatttgtcgagataaatcaaacaacatcttacgagctaatatttgtatttatatattagttaaaaagtatggtcaaagta 50205802  T
Q  736 agt 738  Q
    |||    
T  50205801 agt 50205799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 613 - 748
Target Start/End: Original strand, 50620760 - 50620898
Alignment:
Q  613 tttagttatctatggtaaaggattgtaaaatttaatattttaaaaatatttatcaagacaaatc---aaacattttatatgcttagatttgtatttatat 709  Q
    |||| |||||||  |||||  ||| |||||||||||||||| |||||||||  | |||||||||   |||||| ||| ||||| | ||| |||||||||     
T  50620760 tttaattatctaaagtaaaaaattataaaatttaatattttgaaaatatttgccgagacaaatcaaaaaacatcttacatgctaatattagtatttatac 50620859  T
Q  710 gttagctaaaaaatattgtcaaagtaagttatgtgaata 748  Q
     |||| |||||  ||| |||||||||||||| |||||||    
T  50620860 attagttaaaatgtatggtcaaagtaagttaagtgaata 50620898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 681 - 748
Target Start/End: Complemental strand, 3037093 - 3037026
Alignment:
Q  681 attttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaata 748  Q
    |||||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||||| |||||||||    
T  3037093 attttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcatgtgaata 3037026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 639 - 690
Target Start/End: Complemental strand, 5390380 - 5390329
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaacattttatatg 690  Q
    |||||||||||||||||||||||| | | ||||||||| |||||||||||||    
T  5390380 aaaatttaatattttaaaaatattcaacgagacaaatctaacattttatatg 5390329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 603 - 681
Target Start/End: Complemental strand, 25918398 - 25918319
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    ||||||||| |||| |||||||  |||||||||| ||||| ||||||||||| || |||||| || ||||||||||||||    
T  25918398 cgttaatatctttaattatctaaagtaaaggattataaaaatttaatattttgaagatatttgtcgagacaaatcaaaca 25918319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 639 - 690
Target Start/End: Complemental strand, 30868925 - 30868874
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaacattttatatg 690  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||| |||||||    
T  30868925 aaaatttaatattttaaaaatattcatcgagacaaatccaacatcttatatg 30868874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 696 - 791
Target Start/End: Original strand, 36523132 - 36523227
Alignment:
Q  696 atttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttgagatggatgga 791  Q
    |||||||||||||| |||| |||||| ||| |||||||||||| |||| |||| || |||| |  |||||| ||||| |||||||| | |||||||    
T  36523132 atttgtatttatatattagttaaaaagtatagtcaaagtaagtcatgtaaatagtgcatattgcaaaaatgcgacatatattttgaaacggatgga 36523227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 648 - 719
Target Start/End: Complemental strand, 56042644 - 56042573
Alignment:
Q  648 tattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagctaaa 719  Q
    ||||| ||||||||||| | ||||||| ||||||||||||||||| | |||| ||||||||| | |||||||    
T  56042644 tatttaaaaaatatttaacgagacaaaacaaacattttatatgctaaaatttatatttatatataagctaaa 56042573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 639 - 681
Target Start/End: Original strand, 17446737 - 17446779
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    ||||||||||||||||||||||||| || ||||||||||||||    
T  17446737 aaaatttaatattttaaaaatatttgtcgagacaaatcaaaca 17446779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 639 - 681
Target Start/End: Complemental strand, 20651567 - 20651525
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    |||||||||||||||||||||||||||| ||||||||| ||||    
T  20651567 aaaatttaatattttaaaaatatttatcgagacaaatctaaca 20651525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 639 - 748
Target Start/End: Original strand, 20875351 - 20875463
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||| ||||||| |||||||| ||  ||||||||||   ||||| ||||||||  | ||||  |||||||| |||| |||||||||| |||||||||    
T  20875351 aaaatttgatattttgaaaatattcatggagacaaatcaaacaacatcttatatgcaaacatttacatttatatattagttaaaaaatatggtcaaagta 20875450  T
Q  736 agttatgtgaata 748  Q
    | |||| ||||||    
T  20875451 aattatatgaata 20875463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 639 - 796
Target Start/End: Complemental strand, 23360330 - 23360176
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagt 738  Q
    ||||||||||||||| ||||||||| |  | |||||||||||||  ||  |||  | ||||||||| |||| |||| |||||||||  ||||||||||||    
T  23360330 aaaatttaatattttgaaaatattttttgaaacaaatcaaacatcatacttgccaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagt 23360232  T
Q  739 tatgtgaataatgtatatcgtgaaaatgtgacatgtattttgagatggatggattata 796  Q
     |  |||||| || |||| |  |||||| |||||||||||||| ||| ||||| ||||    
T  23360231 ca--tgaatagtgcatattgcaaaaatgcgacatgtattttgaaatgaatggagtata 23360176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 639 - 681
Target Start/End: Complemental strand, 27976727 - 27976685
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    |||||||||||||||||||||||||||| |||| |||||||||    
T  27976727 aaaatttaatattttaaaaatatttatcgagacgaatcaaaca 27976685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 597 - 675
Target Start/End: Original strand, 53816456 - 53816534
Alignment:
Q  597 ttttatcgttaatatatttagttatctatggtaaaggattgtaaaatttaatattttaaaaatatttatcaagacaaat 675  Q
    ||||||| ||||||| |||| ||||| ||   |||  ||| ||||||||||||||||||||||||||||| ||||||||    
T  53816456 ttttatctttaatatttttaattatccattaaaaaaaattataaaatttaatattttaaaaatatttatcgagacaaat 53816534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 697 - 778
Target Start/End: Complemental strand, 56080079 - 56079998
Alignment:
Q  697 tttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattt 778  Q
    ||||||| ||||| |||| |||||||||| |||||||||| ||||| ||||| || | ||  | ||||||||||||||||||    
T  56080079 tttgtatgtatatattagttaaaaaatatagtcaaagtaaattatgcgaatagtgcacattatcaaaatgtgacatgtattt 56079998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 639 - 690
Target Start/End: Complemental strand, 9965560 - 9965509
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaacattttatatg 690  Q
    |||||||||||||||||||||||||||| |||| |||  ||||| |||||||    
T  9965560 aaaatttaatattttaaaaatatttatcgagacgaattcaacatcttatatg 9965509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 696 - 743
Target Start/End: Original strand, 14144621 - 14144668
Alignment:
Q  696 atttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgt 743  Q
    |||||||||||||| |||| |||||||| | |||||||||||||||||    
T  14144621 atttgtatttatatattagttaaaaaatgtggtcaaagtaagttatgt 14144668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 645 - 749
Target Start/End: Complemental strand, 50815114 - 50815006
Alignment:
Q  645 taatattttaaaaatatttatcaagacaaatcaaacattt----tatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagtta 740  Q
    ||||||||| ||||||||||| |||||||||||||||  |    || | | | | |||||||||||||| | || |||||||||   |||||||||||||    
T  50815114 taatattttcaaaatatttattaagacaaatcaaacaaatatcatacacgttaatatttgtatttatatataagttaaaaaataaaatcaaagtaagtta 50815015  T
Q  741 tgtgaataa 749  Q
    |||||||||    
T  50815014 tgtgaataa 50815006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 603 - 751
Target Start/End: Original strand, 4467587 - 4467738
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaattt-aatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatt 698  Q
    ||||||||| |||| |||||||  |||||  ||| |||||||| ||||||| |||| ||||| || ||||||||||   ||||| ||| ||||| | |||    
T  4467587 cgttaatatctttaattatctaaagtaaaaaattataaaattttaatatttgaaaa-tatttgtcgagacaaatcaaacaacatcttacatgctaatatt 4467685  T
Q  699 tgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatg 751  Q
    ||||||||||  |||| |||||| ||| ||||||| |||| | || |||||||    
T  4467686 tgtatttatacattagttaaaaagtatagtcaaagcaagtcaagtaaataatg 4467738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 639 - 681
Target Start/End: Original strand, 19433462 - 19433504
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    ||||||||||||||| |||||||| ||| ||||||||||||||    
T  19433462 aaaatttaatattttgaaaatattcatcgagacaaatcaaaca 19433504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 639 - 681
Target Start/End: Original strand, 27977784 - 27977826
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    ||||||||||| |||||||||||||||| ||||||||| ||||    
T  27977784 aaaatttaataatttaaaaatatttatcgagacaaatcgaaca 27977826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 696 - 738
Target Start/End: Original strand, 34652211 - 34652253
Alignment:
Q  696 atttgtatttatatgttagctaaaaaatattgtcaaagtaagt 738  Q
    ||||||||||||||||||| |||||||||| ||| ||||||||    
T  34652211 atttgtatttatatgttagttaaaaaatatggtcgaagtaagt 34652253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 696 - 779
Target Start/End: Original strand, 51355202 - 51355287
Alignment:
Q  696 atttgtatttatatgttagctaaaaa--atattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtatttt 779  Q
    |||||||||||||| |||||||||||  |||| |||||||||| |||  ||| ||||| |||| || ||| || ||||||||||||    
T  51355202 atttgtatttatatattagctaaaaattatatggtcaaagtaaattacatgagtaatgcatattgttaaagtgcgacatgtatttt 51355287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 639 - 681
Target Start/End: Complemental strand, 55190871 - 55190829
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    |||||||||||||||||||||||| |||||||| |||| ||||    
T  55190871 aaaatttaatattttaaaaatattcatcaagacgaatccaaca 55190829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 656 - 732
Target Start/End: Complemental strand, 25101856 - 25101782
Alignment:
Q  656 aaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaa 732  Q
    ||||||||||| | ||||||| |||  |||||||||| | ||||| ||||||||||||| |||||| ||| ||||||    
T  25101856 aaatatttatcgaaacaaatcgaac--tttatatgctaatatttgaatttatatgttagttaaaaagtatggtcaaa 25101782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 696 - 781
Target Start/End: Complemental strand, 35686471 - 35686386
Alignment:
Q  696 atttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    |||||||||||||  |||| |||||| ||| |||||||||||||| ||||||| || | || |  |||||  ||||||||||||||    
T  35686471 atttgtatttatacattagttaaaaagtatggtcaaagtaagttaagtgaatagtgcacattgcaaaaattggacatgtattttga 35686386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 678 - 779
Target Start/End: Complemental strand, 38721453 - 38721352
Alignment:
Q  678 aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtatt 777  Q
    ||||| ||| ||||| | |||||||||||||| || | ||||||||||  ||||| ||||| |||||||||||  | || |  |||||| ||||||||||    
T  38721453 aacatcttacatgctaacatttgtatttatatatttgttaaaaaatatgatcaaaataagtcatgtgaataatacacattgaaaaaatgcgacatgtatt 38721354  T
Q  778 tt 779  Q
    ||    
T  38721353 tt 38721352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 4e-25; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 678 - 781
Target Start/End: Complemental strand, 15337604 - 15337501
Alignment:
Q  678 aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtatt 777  Q
    ||||||||| ||||| | |||||||||||||| |||| |||||||||| ||||||||||||||||||||||||| |||| || ||| ||||| |||||||    
T  15337604 aacattttacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagttatgtgaataatgcatattgtaaaattgtgaaatgtatt 15337505  T
Q  778 ttga 781  Q
    ||||    
T  15337504 ttga 15337501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 639 - 779
Target Start/End: Original strand, 3623817 - 3623956
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagt 738  Q
    ||||||| |||||||||||||||| ||  ||||||||||||||| ||| ||||| | |||||||||||||| |||| | |||||||| ||||||||||      
T  3623817 aaaatttgatattttaaaaatattcattgagacaaatcaaacatcttacatgctaacatttgtatttatatattag-ttaaaaatatggtcaaagtaaac 3623915  T
Q  739 tatgtgaataatgtatatcgtgaaaatgtgacatgtatttt 779  Q
    ||| |||||||||||||| || ||| || ||||| ||||||    
T  3623916 tatatgaataatgtatattgtaaaactgcgacatatatttt 3623956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 641 - 748
Target Start/End: Complemental strand, 4441006 - 4440896
Alignment:
Q  641 aatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaag 737  Q
    |||||||||||||| ||||||||||| | ||||||| ||||   | ||| ||||| | |||||||||||||||||| ||||||| ||| |||||||||||    
T  4441006 aatttaatattttataaatatttatcgaaacaaatcgaacaacatcttacatgctaacatttgtatttatatgttacctaaaaagtatggtcaaagtaag 4440907  T
Q  738 ttatgtgaata 748  Q
    |||| ||||||    
T  4440906 ttatatgaata 4440896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 603 - 781
Target Start/End: Complemental strand, 22054967 - 22054785
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgt-aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatt 698  Q
    ||||||||| |||| |||||||  |||||  ||| | ||||||||||||||| ||||||||| || ||||||||||||||   | ||| ||||| | |||    
T  22054967 cgttaatatctttaattatctaaagtaaaaaattatgaaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatt 22054868  T
Q  699 tgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||||||||||  |||| |||||| ||| |||||||||||| | ||||||| || |||| |  |||||  ||||||||||||||    
T  22054867 tgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcatattgcaaaaattggacatgtattttga 22054785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 32414783 - 32414928
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  32414783 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 32414882  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| | ||||||| || | || |  |||||  ||||||||||||||    
T  32414883 agtcaagtgaatagtgcacattgaaaaaattggacatgtattttga 32414928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 603 - 803
Target Start/End: Original strand, 18668755 - 18668959
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatt 698  Q
    ||||||||| |||| |||||||  |||||  ||| ||||| ||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||    
T  18668755 cgttaatatctttaattatctaaagtaaaaaattataaaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatt 18668854  T
Q  699 tgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttgagatggatggattatatg 798  Q
    ||||||||||  |||| |||||||||| ||||||| |||| | ||||||| || | || |  |||||  |||||||||||||| | ||| ||| |||||     
T  18668855 tgtatttatacattagttaaaaaatatggtcaaagcaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggagggagtatatt 18668954  T
Q  799 attaa 803  Q
    |||||    
T  18668955 attaa 18668959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 639 - 738
Target Start/End: Complemental strand, 6563384 - 6563282
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  6563384 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 6563285  T
Q  736 agt 738  Q
    |||    
T  6563284 agt 6563282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 603 - 736
Target Start/End: Complemental strand, 1041019 - 1040882
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatt 698  Q
    |||||||||||||| |||||||  |||||  ||| ||||| ||||||||||||||||||||| || ||||||||||||||   | ||| ||| | | |||    
T  1041019 cgttaatatatttaattatctaaagtaaaaaattataaaaatttaatattttaaaaatatttgtcgagacaaatcaaacaacatcttacatgttaatatt 1040920  T
Q  699 tgtatttatatgttagctaaaaaatattgtcaaagtaa 736  Q
    ||||||||||  |||| |||||| ||| ||||||||||    
T  1040919 tgtatttatacattagttaaaaagtatggtcaaagtaa 1040882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 639 - 741
Target Start/End: Complemental strand, 2360148 - 2360043
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||| |||||||||| ||||| ||||||||||||||   ||||||||| ||||| | |||| ||||||||| |||| |||||| ||| |||||||||    
T  2360148 aaaatttgatattttaaacatattcatcaagacaaatcaaacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagta 2360049  T
Q  736 agttat 741  Q
    | ||||    
T  2360048 aattat 2360043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 639 - 781
Target Start/End: Complemental strand, 4148089 - 4147944
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || || |||||||||||   | ||| ||||| | |||||||||||||  |||| |||||| ||| |||||||||    
T  4148089 aaaatttaatattttgaaaatatttgtcgaggcaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagta 4147990  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| | |||||||||| | || |  |||||  ||||||||||||||    
T  4147989 agtcaagtgaataatgcacattgcaaaaattggacatgtattttga 4147944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 17257755 - 17257900
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||| ||  |||| |||||| ||| |||||||||    
T  17257755 aaaatttaatattttgaaaatatttgtctagacaaatcaaacaacatcttacatgctaatatttgtatttgtacattagttaaaaagtatggtcaaagta 17257854  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| | |||||||||| | || |  |||||  ||||||||||||||    
T  17257855 agtcaagtgaataatgcacattgcaaaaattagacatgtattttga 17257900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 19088062 - 19088207
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||| |||| |||||| | | |||||||||    
T  19088062 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtttggtcaaagta 19088161  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| | ||||||| || | || |  |||||  ||||||||||||||    
T  19088162 agtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 19088207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 639 - 748
Target Start/End: Original strand, 24624045 - 24624157
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| |||||||||  | ||||||||||||||   | ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  24624045 aaaatttaatattttgaaaatatttgccgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 24624144  T
Q  736 agttatgtgaata 748  Q
    ||| | |||||||    
T  24624145 agtcaagtgaata 24624157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 672 - 781
Target Start/End: Complemental strand, 31869830 - 31869721
Alignment:
Q  672 aaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgaca 771  Q
    ||||||||||| ||| ||||| | |||||||||||||| |||| ||||||| || |||||||||| ||||| ||||| |||| || || |||  | ||||    
T  31869830 aaatcaaacatcttacatgctaacatttgtatttatatattagttaaaaaaaatggtcaaagtaaattatgggaatagtgtacattgtaaaatcgcgaca 31869731  T
Q  772 tgtattttga 781  Q
    ||||||||||    
T  31869730 tgtattttga 31869721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 639 - 738
Target Start/End: Original strand, 20226402 - 20226504
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||||||   | ||| ||||| | |||||||||||||  |||| |||||| ||| |||||||||    
T  20226402 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacgtcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagta 20226501  T
Q  736 agt 738  Q
    |||    
T  20226502 agt 20226504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 639 - 738
Target Start/End: Original strand, 22120386 - 22120488
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||||||   | ||| ||||| | |||||||||||||  |||| |||||| ||| |||||||||    
T  22120386 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacgtcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagta 22120485  T
Q  736 agt 738  Q
    |||    
T  22120486 agt 22120488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 603 - 781
Target Start/End: Complemental strand, 28477948 - 28477766
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaacatt---ttatatgcttagatt 698  Q
    ||||||||| |||| |||||||  |||||  ||||||||| ||||||||||| || ||||||||| | | ||||||||||     ||| ||||| | |||    
T  28477948 cgttaatatctttaattatctaaagtaaaaaattgtaaaaatttaatattttgaatatatttatcgatataaatcaaacaacaacttacatgctaatatt 28477849  T
Q  699 tgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||||||||||| |||| |||||| ||| ||||||| |||| ||||||||| |  | || |  ||| |||||||||||||||||    
T  28477848 tgtatttatatattagttaaaaattatggtcaaagcaagtcatgtgaatagtacacattgcaaaattgtgacatgtattttga 28477766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 603 - 781
Target Start/End: Complemental strand, 29790401 - 29790219
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaacatt---ttatatgcttagatt 698  Q
    ||||||||| |||| |||||||  |||||  ||||||||| ||||||||||| || ||||||||| | | ||||||||||     ||| ||||| | |||    
T  29790401 cgttaatatctttaattatctaaagtaaaaaattgtaaaaatttaatattttgaatatatttatcgatataaatcaaacaacaacttacatgctaatatt 29790302  T
Q  699 tgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||||||||||| |||| |||||| ||| ||| |||||||| ||||||||| | || || |  ||| || ||||||||||||||    
T  29790301 tgtatttatatattagttaaaaattatggtccaagtaagtcatgtgaatagtatacattgcaaaattgcgacatgtattttga 29790219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 641 - 748
Target Start/End: Original strand, 19240701 - 19240808
Alignment:
Q  641 aatttaatattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagtta 740  Q
    ||||||||||| | || ||||||| | ||| |||||||| || |||  |||  | |||||||||||||| |||| |||||||||| |||||| |||||||    
T  19240701 aatttaatattatgaatatatttaacgagataaatcaaatatcttacttgcaaatatttgtatttatatattagttaaaaaatatggtcaaaataagtta 19240800  T
Q  741 tgtgaata 748  Q
    ||||||||    
T  19240801 tgtgaata 19240808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 639 - 781
Target Start/End: Complemental strand, 32671974 - 32671829
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||||||   | ||| | ||| | |||||||||||||  |||| |||||| ||| |||||||||    
T  32671974 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacacgctaatatttgtatttatacattagttaaaaattatggtcaaagta 32671875  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| | ||||||| || | || |  |||||  ||||||||||||||    
T  32671874 agtgaagtgaatagtgcacattgcaaaaattggacatgtattttga 32671829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 601 - 681
Target Start/End: Complemental strand, 12226172 - 12226091
Alignment:
Q  601 atcgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    ||||||||||| |||| |||||||  |||||  ||| ||||| ||||||||||| |||||||||||| ||||||||||||||    
T  12226172 atcgttaatatctttaattatctaaagtaaaaaattataaaaatttaatattttgaaaatatttatcgagacaaatcaaaca 12226091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 639 - 787
Target Start/End: Original strand, 17213888 - 17214039
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| |  ||||||||||   ||||| ||| ||||| | |||||||||||||  |||| |||||| ||| |||||||||    
T  17213888 aaaatttaatattttgaaaatatttgtggagacaaatcaaacaacatcttacatgctaatatttgtatttataaattagttaaaaagtatagtcaaagta 17213987  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttgagatgga 787  Q
    ||| |  |||||| || | || |  |||||  |||||||||||||| |||||    
T  17213988 agtcaaatgaatagtgcacattgcaaaaattagacatgtattttgaaatgga 17214039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 639 - 751
Target Start/End: Original strand, 24955500 - 24955615
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | ||||||||||||   |||| ||||||||||  ||||| ||    
T  24955500 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttattcattagttaaaaaatatgatcaaaata 24955599  T
Q  736 agttatgtgaataatg 751  Q
    ||| | ||||||||||    
T  24955600 agtcaagtgaataatg 24955615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 601 - 748
Target Start/End: Original strand, 3989330 - 3989479
Alignment:
Q  601 atcgttaatatatttagttatctatggtaaaggattgtaaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagat 697  Q
    ||||||||||| |||| |||||||  |||||  ||   ||||||||||||||||||||||||| || ||||||||||||||   | ||| ||||| | |     
T  3989330 atcgttaatatctttaattatctacagtaaaaaatataaaaatttaatattttaaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatag 3989429  T
Q  698 ttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaata 748  Q
    ||||||||| |  |||| |||||| ||| |||||||||||| | |||||||    
T  3989430 ttgtattta-acattagttaaaaagtatggtcaaagtaagtcaagtgaata 3989479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 677 - 748
Target Start/End: Original strand, 10298718 - 10298789
Alignment:
Q  677 aaacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaata 748  Q
    |||||||||| ||||| | |||||||||||||| ||||  ||||||||| |||||| |||| ||||||||||    
T  10298718 aaacattttacatgctaacatttgtatttatatattagtgaaaaaatatggtcaaattaagctatgtgaata 10298789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 603 - 681
Target Start/End: Complemental strand, 10520663 - 10520584
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaatt-taatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    ||||||||| |||| |||||||  |||||  ||| ||||| | |||||||||||||||||||||| ||||||||||||||    
T  10520663 cgttaatatctttaattatctaaagtaaaaaattataaaaatgtaatattttaaaaatatttatcgagacaaatcaaaca 10520584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 15383034 - 15383179
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||| ||||||   ||||| ||| ||||| | |||||||||||||  |||| |||||| ||| || ||||||    
T  15383034 aaaatttaatattttgaaaatatttgtcgagaaaaatcaaacaacatcttacatgctaatatttgtatttatagattagttaaaaagtatggttaaagta 15383133  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| |  ||||||||| | || |  |||||  ||||||||||||||    
T  15383134 agtcaaatgaataatgcacattgcaaaaattggacatgtattttga 15383179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 639 - 690
Target Start/End: Original strand, 17417628 - 17417679
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaacattttatatg 690  Q
    |||||||||||||||||||||||| ||| |||| |||| ||||| |||||||    
T  17417628 aaaatttaatattttaaaaatattgatcgagacgaatccaacatcttatatg 17417679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 639 - 681
Target Start/End: Original strand, 25475917 - 25475959
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    ||||||||||||||| ||||||||| || ||||||||||||||    
T  25475917 aaaatttaatattttgaaaatatttgtcgagacaaatcaaaca 25475959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 647 - 692
Target Start/End: Complemental strand, 3410540 - 3410495
Alignment:
Q  647 atattttaaaaatatttatcaagacaaatcaaacattttatatgct 692  Q
    |||||||||||||||||||||| | ||||| ||||| |||||||||    
T  3410540 atattttaaaaatatttatcaaaataaatccaacatcttatatgct 3410495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 601 - 681
Target Start/End: Original strand, 16192947 - 16193028
Alignment:
Q  601 atcgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    ||||||||||| |||| |||||||  |||||  ||| ||||| ||||||||||| ||||||||| |  ||||||||||||||    
T  16192947 atcgttaatatctttaattatctaaagtaaaaaattataaaaatttaatattttgaaaatatttgttgagacaaatcaaaca 16193028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 603 - 679
Target Start/End: Original strand, 21540696 - 21540773
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaa 679  Q
    ||||||||| |||| |||||||  |||||  ||| ||||| ||||||||||| ||||||||| || ||||||||||||    
T  21540696 cgttaatatctttaattatctaatgtaaaaaattataaaaatttaatattttgaaaatatttgtcgagacaaatcaaa 21540773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 696 - 741
Target Start/End: Original strand, 23158073 - 23158118
Alignment:
Q  696 atttgtatttatatgttagctaaaaaatattgtcaaagtaagttat 741  Q
    |||||||||||||| |||| |||||||| | |||||||||||||||    
T  23158073 atttgtatttatatattagttaaaaaatgtggtcaaagtaagttat 23158118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 6e-24; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 639 - 748
Target Start/End: Complemental strand, 6766527 - 6766418
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagt 738  Q
    ||||||||||||||| ||||||||| || ||||||||||||||| ||| ||||| | |||||||||||||| |||| |||||| ||| ||||||||||||    
T  6766527 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 6766428  T
Q  739 tatgtgaata 748  Q
     | |||||||    
T  6766427 caagtgaata 6766418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 639 - 796
Target Start/End: Original strand, 36757590 - 36757750
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  36757590 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 36757689  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttgagatggatggattata 796  Q
    ||| | ||||||| || | || |  |||||  |||||||||||||| ||||||||| ||||    
T  36757690 agtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaatggatggagtata 36757750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 639 - 797
Target Start/End: Original strand, 11641171 - 11641332
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  11641171 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 11641270  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttgagatggatggattatat 797  Q
    ||| | ||||||| || | || |  |||||  |||||||||||||| ||||| ||| |||||    
T  11641271 agtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaatggagggagtatat 11641332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 16120544 - 16120689
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| |||||| || |||||||||||||   ||||| ||| ||||| | |||||||||||||  |||| |||||| ||| |||||||||    
T  16120544 aaaatttaatattttgaaaatacttgtcaagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagta 16120643  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| | |||||||||| | || |  |||||  ||||||||||||||    
T  16120644 agtcaagtgaataatgcacattgcaaaaattggacatgtattttga 16120689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 639 - 748
Target Start/End: Complemental strand, 30003691 - 30003579
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| |||||||||||||   ||||| ||| ||||| | |||||||||||||  |||| |||||| ||| |||||||||    
T  30003691 aaaatttaatattttgaaaatatttgtcaagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagta 30003592  T
Q  736 agttatgtgaata 748  Q
    ||| | |||||||    
T  30003591 agtcaagtgaata 30003579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 603 - 781
Target Start/End: Original strand, 38153344 - 38153526
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaa---cattttatatgcttagatt 698  Q
    ||||||||| |||| |||||||  |||||  ||| ||||| |||||||||||| ||||||||||| | ||||||| ||   ||| ||| ||| | | |||    
T  38153344 cgttaatatctttaattatctaaagtaaaaaattataaaaatttaatattttataaatatttatcgaaacaaatcgaagaacatcttacatgataacatt 38153443  T
Q  699 tgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    |||||||||||||||| |||||| ||| || | ||||||| ||||||||| || | ||  | |||||| ||||||||||||||    
T  38153444 tgtatttatatgttagttaaaaagtatggtaacagtaagtcatgtgaatagtgcacattataaaaatgcgacatgtattttga 38153526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 6402514 - 6402659
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||| |||| |||||| ||| |||||| ||    
T  6402514 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaaata 6402613  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| | ||||||| || | || |  |||||  ||||||||||||||    
T  6402614 agtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 6402659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 639 - 749
Target Start/End: Original strand, 9342749 - 9342862
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||  |||| ||||||||||  ||||||||    
T  9342749 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatgatcaaagta 9342848  T
Q  736 agttatgtgaataa 749  Q
    ||| | ||||||||    
T  9342849 agtcaagtgaataa 9342862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 603 - 736
Target Start/End: Complemental strand, 27292835 - 27292698
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatt 698  Q
    |||||||||||||| |||||||  |||||  ||| ||||| ||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||    
T  27292835 cgttaatatatttaattatctaaagtaaaaaattataaaaatttaatattttgaaaatatttgtcgagacaaatcaaataacatcttacatgctaatatt 27292736  T
Q  699 tgtatttatatgttagctaaaaaatattgtcaaagtaa 736  Q
    ||||||||||  |||| |||||| ||| ||||||||||    
T  27292735 tgtatttatactttagttaaaaagtatagtcaaagtaa 27292698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 40771876 - 40772021
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||  |||| |||||| ||| |||||||||    
T  40771876 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagta 40771975  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    | | | ||||||| || | || || |||||  ||||||||||||||    
T  40771976 aatcaagtgaatagtgcacattgtaaaaattggacatgtattttga 40772021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 639 - 748
Target Start/End: Complemental strand, 17306112 - 17306000
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||| |||  |||||| ||| |||||||||    
T  17306112 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattaattaaaaagtatagtcaaagta 17306013  T
Q  736 agttatgtgaata 748  Q
    ||| | |||||||    
T  17306012 agtcaagtgaata 17306000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 639 - 751
Target Start/End: Original strand, 40800491 - 40800606
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagct-aaaaaatattgtcaaagt 734  Q
    ||||||| |||||||||||||||| ||| ||||||||||   ||||| ||| ||||| | ||||||| |||||| |||| | ||||||||| ||||||||    
T  40800491 aaaatttgatattttaaaaatattcatcgagacaaatcaaacaacatcttacatgctaacatttgta-ttatatattagttaaaaaaatatggtcaaagt 40800589  T
Q  735 aagttatgtgaataatg 751  Q
    ||||||||||| |||||    
T  40800590 aagttatgtgattaatg 40800606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 639 - 748
Target Start/End: Original strand, 40977592 - 40977704
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| |||||||||||||   ||||| ||| ||||| | |||||||||||||  |||| |||||| ||| ||||||||     
T  40977592 aaaatttaatattttcaaaatatttgtcaagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtt 40977691  T
Q  736 agttatgtgaata 748  Q
    ||| | |||||||    
T  40977692 agtcaagtgaata 40977704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 639 - 748
Target Start/End: Original strand, 42788646 - 42788758
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||||||||||||| || ||||||||||||||   | ||| ||||  | |||||||||||||  |||| |||||| ||| |||||||||    
T  42788646 aaaatttaatattttaaaaatatttgtcgagacaaatcaaacaacatcttacatgcaaatatttgtatttatacattagttaaaaagtatggtcaaagta 42788745  T
Q  736 agttatgtgaata 748  Q
    ||| | |||||||    
T  42788746 agtcaagtgaata 42788758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 647 - 748
Target Start/End: Original strand, 30385260 - 30385361
Alignment:
Q  647 atattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaa 746  Q
    ||||||| ||||||||| || ||| |||| |||||| ||| || || | |||||||||||||| |||| |||||||||| ||||||||||  ||||||||    
T  30385260 atattttgaaaatatttgtcgagagaaattaaacatcttacatactaacatttgtatttatatattagttaaaaaatatggtcaaagtaaactatgtgaa 30385359  T
Q  747 ta 748  Q
    ||    
T  30385360 ta 30385361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 639 - 791
Target Start/End: Complemental strand, 36399256 - 36399101
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||||||   | ||| | ||| | |||||||||||||  |||| |||||| ||| |||||||||    
T  36399256 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacacgctaatatttgtatttatacattagttaaaaattatggtcaaagta 36399157  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttgagatggatgga 791  Q
    ||| | ||||||| || | || |  |||||  |||||||||||||| | |||||||    
T  36399156 agtgaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggatgga 36399101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 639 - 738
Target Start/End: Complemental strand, 4302273 - 4302174
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagt 738  Q
    |||| |||||||||| ||||||||| || | ||||||||||||| ||| ||||| | |||| ||||||||  |||| ||||||| ||| |||||||||||    
T  4302273 aaaaattaatattttgaaaatatttgtcgaaacaaatcaaacatcttacatgctaatatttatatttatacattagttaaaaaacattatcaaagtaagt 4302174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 603 - 748
Target Start/End: Complemental strand, 26910271 - 26910122
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaa---cattttatatgcttagatt 698  Q
    ||||||||| |||| |||||||  |||||  ||| ||||| ||||||||||||||||||||| ||||||||||| |||   ||| ||  ||| | | |||    
T  26910271 cgttaatatctttaattatctaaagtaaaaaattataaaaatttaatattttaaaaatatttgtcaagacaaattaaacatcatcttgcatgttaatatt 26910172  T
Q  699 tgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaata 748  Q
    ||||||||||  |||| |||||| ||| |||||||||||| | |||||||    
T  26910171 tgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaata 26910122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 639 - 748
Target Start/End: Original strand, 42735269 - 42735384
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaa---cattttatatgcttagatttgtatttatatgttagctaaaaaa---tattgtcaaa 732  Q
    ||||||||||||||| ||||||||| || ||||||||||||   ||| ||| ||||| | |||||||||||||| |||| |||||||   ||| ||||||    
T  42735269 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacatcatcttacatgctaatatttgtatttatatattagttaaaaaaaagtatggtcaaa 42735368  T
Q  733 gtaagttatgtgaata 748  Q
    |||||| | |||||||    
T  42735369 gtaagtcaagtgaata 42735384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 639 - 748
Target Start/End: Complemental strand, 30701876 - 30701764
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||||||   | ||| | ||| | |||||||||||||  |||| |||||| ||| |||||||||    
T  30701876 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacacgctaatatttgtatttatacattagttaaaaattatggtcaaagta 30701777  T
Q  736 agttatgtgaata 748  Q
    ||| | |||||||    
T  30701776 agtcaagtgaata 30701764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 647 - 779
Target Start/End: Original strand, 3485319 - 3485454
Alignment:
Q  647 atattttaaaaatatttatcaagacaaatcaaacatt---ttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgt 743  Q
    ||||||| |||||||| ||| ||||||||||||||     ||| ||| | | |||||||||||||| |||| ||||||||||  |||||||||||||||     
T  3485319 atattttgaaaatattaatcgagacaaatcaaacaacaccttacatgataacatttgtatttatatattagttaaaaaatatgatcaaagtaagttatgc 3485418  T
Q  744 gaataatgtatatcgtgaaaatgtgacatgtatttt 779  Q
    ||||| || |||| || ||| |  ||||||||||||    
T  3485419 gaatagtgcatattgtaaaattacgacatgtatttt 3485454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 607 - 749
Target Start/End: Complemental strand, 9881467 - 9881321
Alignment:
Q  607 aatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatc---aaacattttatatgcttagatttgta 702  Q
    ||||| |||| |||||| |||||||  ||| ||||| |||||| ||||||||||||||||| |||||||||    ||||| ||| ||| | | |||| ||    
T  9881467 aatatctttaattatctgtggtaaacaattataaaaatttaatgttttaaaaatatttatctagacaaatcgaacaacatcttacatgataacatttata 9881368  T
Q  703 tttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataa 749  Q
    | ||||| |||| |||||| ||| || ||| ||||||||||||||||    
T  9881367 tgtatatattagttaaaaattatggttaaaataagttatgtgaataa 9881321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 643 - 781
Target Start/End: Original strand, 15382533 - 15382675
Alignment:
Q  643 tttaatattttaaaaa-tatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagt 738  Q
    |||||||||||||||| |||| ||| | ||||||||||||   | ||| || || | |||||||||||||| |||  |||||||  | |||| |||||||    
T  15382533 tttaatattttaaaaaatattcatcgaaacaaatcaaacaacatcttacatactaatatttgtatttatatattatttaaaaaaattggtcagagtaagt 15382632  T
Q  739 tatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    |||||||||| |||| || || ||| || ||||||||||||||    
T  15382633 tatgtgaatagtgtacattgtaaaattgcgacatgtattttga 15382675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 639 - 753
Target Start/End: Complemental strand, 48375161 - 48375043
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaa-tcaaacatt---ttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagt 734  Q
    ||||||||||||||| ||||||||| || ||| ||| ||||||| |   ||| ||||| | |||||||||||||  |||| ||||||||||  ||||| |    
T  48375161 aaaatttaatattttgaaaatatttgtcgagaaaaaatcaaacaatgtcttacatgctaatatttgtatttataaattagttaaaaaatatgatcaaaat 48375062  T
Q  735 aagttatgtgaataatgta 753  Q
    |||||| ||||||||||||    
T  48375061 aagttaagtgaataatgta 48375043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 639 - 681
Target Start/End: Original strand, 2246655 - 2246697
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    ||||||||||||||||||||||||||||||||| |||| ||||    
T  2246655 aaaatttaatattttaaaaatatttatcaagactaatcgaaca 2246697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 639 - 681
Target Start/End: Original strand, 23330556 - 23330598
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    |||||||||||||||||||||||||||| ||||||||| ||||    
T  23330556 aaaatttaatattttaaaaatatttatcgagacaaatccaaca 23330598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 639 - 681
Target Start/End: Complemental strand, 23435721 - 23435679
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    |||||||||||||||||||||||| ||||||||||||| ||||    
T  23435721 aaaatttaatattttaaaaatattaatcaagacaaatccaaca 23435679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 696 - 746
Target Start/End: Complemental strand, 34635005 - 34634955
Alignment:
Q  696 atttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaa 746  Q
    |||||||||||||| |||| ||||||||||| ||||| |||||||||||||    
T  34635005 atttgtatttatatattagttaaaaaatattatcaaaataagttatgtgaa 34634955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 639 - 748
Target Start/End: Complemental strand, 52024184 - 52024072
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||||||   | ||| | ||| | |||| ||||||||  |||| |||||| ||| |||||||||    
T  52024184 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacacgctaatatttatatttatacattagttaaaaattatggtcaaagta 52024085  T
Q  736 agttatgtgaata 748  Q
    ||| | |||||||    
T  52024084 agtgaagtgaata 52024072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 639 - 777
Target Start/End: Complemental strand, 324073 - 323930
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaac---attttatatgcttagatttgtatttatatgttagctaaa-aaat-attgtcaaag 733  Q
    |||||| | ||||||||||||||||||| | ||||||| |||   | |||| ||||| | |||||||||||||| | || |||| |||| ||| |||||     
T  324073 aaaattaattattttaaaaatatttatcgaaacaaatcgaactacaatttacatgctaatatttgtatttatatataagttaaacaaatcattatcaaaa 323974  T
Q  734 taagttatgtgaataatgtatatcgtgaaaatgtgacatgtatt 777  Q
    ||| |||| ||||||||||||||| | |||||| || |||||||    
T  323973 taaattatatgaataatgtatatcttaaaaatgggatatgtatt 323930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 639 - 736
Target Start/End: Complemental strand, 24321419 - 24321317
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaac---attttatatgcttagatttgtatttatatgttagctaaaaa--atattgtcaaag 733  Q
    ||||||||||||||| ||||||||| || |||||||||||||   || ||| ||||| | |||||||||||||  |||| ||||||  |||| |||||||    
T  24321419 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaatatcttacatgctaatatttgtatttatacattagttaaaaattatatggtcaaag 24321320  T
Q  734 taa 736  Q
    |||    
T  24321319 taa 24321317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 647 - 796
Target Start/End: Complemental strand, 27984702 - 27984554
Alignment:
Q  647 atattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaa 746  Q
    ||||||| | |||||| ||| | ||||||||||||| ||| | ||| | |||||||||  ||| |||| |||||| ||| |||||||||||  |||||||    
T  27984702 atattttgataatattcatcgaaacaaatcaaacatcttacaagctaacatttgtattcgtatattagttaaaaa-tatggtcaaagtaagcaatgtgaa 27984604  T
Q  747 taatgtatatcgtgaaaatgtgacatgtattttgagatggatggattata 796  Q
    || || || | || ||| ||||||||||||||| | | ||||||| ||||    
T  27984603 tagtgcatgttgtaaaattgtgacatgtattttaaaacggatggagtata 27984554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 696 - 781
Target Start/End: Original strand, 28030845 - 28030930
Alignment:
Q  696 atttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||||||||||||||||||| |||||| ||| |||||| ||||| |||| ||||||| | || |  ||||||  |||||||||||||    
T  28030845 atttgtatttatatgttagttaaaaagtatggtcaaaataagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttga 28030930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 698 - 778
Target Start/End: Complemental strand, 16689920 - 16689840
Alignment:
Q  698 ttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattt 778  Q
    |||||||||||| |||| || |||||||  ||||||||||||||||||||| || | ||||| ||| ||  ||||||||||    
T  16689920 ttgtatttatatattagttagaaaatatgatcaaagtaagttatgtgaatagtgcacatcgtaaaattgctacatgtattt 16689840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 603 - 748
Target Start/End: Original strand, 42367363 - 42367512
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttag-at 697  Q
    ||||||||| |||| |||||||  |||||  ||| ||||| ||||||||||| ||||||||| || ||||||||||   ||||| ||| ||| |||| ||    
T  42367363 cgttaatatctttaattatctaaagtaaaaaattataaaaatttaatattttgaaaatatttgtcgagacaaatcaaataacatcttacatg-ttagtat 42367461  T
Q  698 ttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaata 748  Q
    |||||||||||  |||| |||||| |||  ||||||||||| | |||||||    
T  42367462 ttgtatttatacattagttaaaaattatgatcaaagtaagtcaagtgaata 42367512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 639 - 690
Target Start/End: Complemental strand, 3088953 - 3088902
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaacattttatatg 690  Q
    |||||| ||||||||||||||||||||| |||  |||||||||| |||||||    
T  3088953 aaaattgaatattttaaaaatatttatcgagatgaatcaaacatcttatatg 3088902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 696 - 779
Target Start/End: Original strand, 44644519 - 44644602
Alignment:
Q  696 atttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtatttt 779  Q
    |||||||||||||| || | ||||||||||  ||||||||||| |||||||||||  | || |  |||||| ||||||||||||    
T  44644519 atttgtatttatatatttgttaaaaaatatgatcaaagtaagtcatgtgaataatacacattgaaaaaatgcgacatgtatttt 44644602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 639 - 681
Target Start/End: Original strand, 4605103 - 4605145
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    |||||||||||||||||||||||| |||||||| |||| ||||    
T  4605103 aaaatttaatattttaaaaatattcatcaagacgaatccaaca 4605145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 639 - 681
Target Start/End: Complemental strand, 23569831 - 23569789
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    |||||||||||||||||||||||| |||||||| |||| ||||    
T  23569831 aaaatttaatattttaaaaatattcatcaagacgaatccaaca 23569789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 639 - 681
Target Start/End: Original strand, 27580980 - 27581022
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||    
T  27580980 aaaatttaatattttaaaaatattcatcgagacaaatctaaca 27581022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 639 - 681
Target Start/End: Original strand, 30005718 - 30005760
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||    
T  30005718 aaaatttaatattttaaaaatattaatcgagacaaatccaaca 30005760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 639 - 681
Target Start/End: Complemental strand, 31049765 - 31049723
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    ||||||| |||||||||||||||| ||| ||||||||||||||    
T  31049765 aaaatttgatattttaaaaatattcatcgagacaaatcaaaca 31049723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 678 - 779
Target Start/End: Original strand, 44647859 - 44647960
Alignment:
Q  678 aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtatt 777  Q
    ||||| ||| ||||| | |||||||||||||| || | ||||||||||  ||||| ||||| |||||||||||  | || |  |||||| ||||||||||    
T  44647859 aacatcttacatgctaacatttgtatttatatatttgttaaaaaatatgatcaaaataagtcatgtgaataatacacattgaaaaaatgcgacatgtatt 44647958  T
Q  778 tt 779  Q
    ||    
T  44647959 tt 44647960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 4e-22; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 603 - 791
Target Start/End: Complemental strand, 18044620 - 18044428
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatt 698  Q
    |||||||||||||| |||||||  |||||  ||| ||||| ||||||||||| ||||||||| || ||||||||||||||   | ||| ||||| | |||    
T  18044620 cgttaatatatttaattatctaaagtaaaaaattataaaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatt 18044521  T
Q  699 tgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttgagatggatgga 791  Q
    ||||||||||  |||| |||||||||| |||||||||||| | ||||||| || | || |  |||||  |||||||||||||| | |||||||    
T  18044520 tgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggatgga 18044428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 603 - 781
Target Start/End: Complemental strand, 32998644 - 32998463
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagattt 699  Q
    ||||||||| |||| ||||| |  |||||  ||| |||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | ||||    
T  32998644 cgttaatatctttaattatccaaagtaaaaaattataaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatattt 32998545  T
Q  700 gtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    |||||||||  |||| |||||||||| |||||||||||| | ||||||| || | || |  |||||  ||||||||||||||    
T  32998544 gtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 32998463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 603 - 781
Target Start/End: Complemental strand, 14237475 - 14237293
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatt 698  Q
    ||||||||| |||| |||||||  |||||  ||| ||||| ||||||||||| ||||||||| || ||||||||||||||   | ||| ||||| | |||    
T  14237475 cgttaatatctttaattatctaaagtaaaaaattataaaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatt 14237376  T
Q  699 tgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||||||||||  |||| |||||||||| |||||||||||| | ||||||| || | || |  |||||  ||||||||||||||    
T  14237375 tgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 14237293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 639 - 781
Target Start/End: Complemental strand, 616941 - 616796
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||||||   | ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  616941 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 616842  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| | ||||||| || | || |  |||||  ||||||||||||||    
T  616841 agtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 616796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 639 - 781
Target Start/End: Complemental strand, 623334 - 623189
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||||||   | ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  623334 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 623235  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| | ||||||| || | || |  |||||  ||||||||||||||    
T  623234 agtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 623189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 639 - 781
Target Start/End: Complemental strand, 40494542 - 40494397
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||||||   | ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  40494542 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 40494443  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| | ||||||| || | || |  |||||  ||||||||||||||    
T  40494442 agtcaagtgaatagtgcacattggaaaaattggacatgtattttga 40494397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 603 - 748
Target Start/End: Complemental strand, 41264005 - 41263856
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatt 698  Q
    ||||||||| |||| |||||||  |||||  ||| ||||| ||||||||||| ||||||||| || ||||||||||||||   | ||| ||||| | |||    
T  41264005 cgttaatatctttaattatctaaagtaaaaaattataaaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatt 41263906  T
Q  699 tgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaata 748  Q
    ||||||||||  |||| |||||||||| |||||||||||| | |||||||    
T  41263905 tgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaata 41263856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 604 - 748
Target Start/End: Complemental strand, 5878510 - 5878362
Alignment:
Q  604 gttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaac---attttatatgcttagattt 699  Q
    ||||||||||||| |||||||  |||||  ||| ||||| ||||||||||| ||||||||| |  |||||||||||||   || ||| ||||| | ||||    
T  5878510 gttaatatatttaattatctaaagtaaaaaattataaaaatttaatattttgaaaatatttgtggagacaaatcaaacgatatcttacatgctaatattt 5878411  T
Q  700 gtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaata 748  Q
    |||||||||  |||| |||||||||| |||||||||||| | |||||||    
T  5878410 gtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaata 5878362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 639 - 736
Target Start/End: Complemental strand, 38957328 - 38957228
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||||||   | ||| ||||| | ||||||||||||| ||||| |||||||||| |||||||||    
T  38957328 aaaatttaatatttttaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacgttagttaaaaaatatggtcaaagta 38957229  T
Q  736 a 736  Q
    |    
T  38957228 a 38957228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 597 - 781
Target Start/End: Original strand, 42587309 - 42587497
Alignment:
Q  597 ttttatcgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatca---aacattttatatgct 692  Q
    ||||| ||||||||| |||| |||||||  |||||  ||| ||||| ||||||||||| ||||||||| || ||||||||||   ||||| ||| |||||    
T  42587309 ttttaccgttaatatctttaattatctaaagtaaaaaattataaaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgct 42587408  T
Q  693 tagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
     | |||||||||||||  |||| |||||| ||| |||||||||||| | ||||||| || | || |  |||||  ||||||||||||||    
T  42587409 aatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 42587497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 603 - 748
Target Start/End: Complemental strand, 132212 - 132063
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatt 698  Q
    ||||||||| |||| |||||||  |||||  ||| ||||| ||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||    
T  132212 cgttaatatctttaattatctaaagtaaaaaattataaaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatt 132113  T
Q  699 tgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaata 748  Q
    ||||||||||  |||| ||||||||||  ||||||||||| | |||||||    
T  132112 tgtatttatacattagttaaaaaatatgatcaaagtaagtcaagtgaata 132063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 603 - 738
Target Start/End: Original strand, 2766115 - 2766254
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatt 698  Q
    |||||||||||||| |||||||  |||||  ||| ||||| ||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||    
T  2766115 cgttaatatatttaattatctaaagtaaaaaattataaaaatttaatattttgaaaatatttttcgagacaaatcaaacaacatcttacatgctaatatt 2766214  T
Q  699 tgtatttatatgttagctaaaaaatattgtcaaagtaagt 738  Q
    | ||||||||  |||| |||||| ||| ||||||||||||    
T  2766215 tatatttatacattagttaaaaagtatggtcaaagtaagt 2766254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 639 - 781
Target Start/End: Complemental strand, 8394504 - 8394359
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||||||||||||| || ||||||||||||||   | ||| || || | ||||||| |||||  |||| |||||||| | |||||||||    
T  8394504 aaaatttaatattttaaaaatatttgtcgagacaaatcaaacaacatcttaaatactaatatttgtacttatacattagttaaaaaatttggtcaaagta 8394405  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| | ||||||| || | || |  |||||  ||||||||||||||    
T  8394404 agtcaagtgaatagtgcacattgcaaaaattagacatgtattttga 8394359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 643 - 725
Target Start/End: Complemental strand, 18090482 - 18090397
Alignment:
Q  643 tttaatattttaaaaatatttatcaagacaaatc---aaacattttatatgcttagatttgtatttatatgttagctaaaaaatat 725  Q
    |||||||||||||||||||||||| |||||||||    ||||| ||||||||| | |||| ||||||||| |||| ||||||||||    
T  18090482 tttaatattttaaaaatatttatcgagacaaatcgaacaacatcttatatgctaacatttatatttatatattagttaaaaaatat 18090397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 653 - 735
Target Start/End: Original strand, 11162380 - 11162461
Alignment:
Q  653 taaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    |||||||||| ||| ||||||||||||||| || |||||| | |||||| ||||||| |||| |||||||||| |||||||||    
T  11162380 taaaaatattcatcgagacaaatcaaacatcttttatgctaacatttgtctttatatattag-taaaaaatatggtcaaagta 11162461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 639 - 746
Target Start/End: Original strand, 3370360 - 3370470
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaacatt---ttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || | |||||||||||| |   ||| ||  | | |||||||||||||| |||  |||||||||| |||||||||    
T  3370360 aaaatttaatattttgaaaatatttgtcgaaacaaatcaaacaatatcttacatattaacatttgtatttatatattaattaaaaaatatggtcaaagta 3370459  T
Q  736 agttatgtgaa 746  Q
    ||| |||||||    
T  3370460 agtcatgtgaa 3370470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 696 - 748
Target Start/End: Original strand, 33700237 - 33700289
Alignment:
Q  696 atttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaata 748  Q
    |||||||||||||| |||| |||||||||| ||||||||||| ||||||||||    
T  33700237 atttgtatttatatattagttaaaaaatatggtcaaagtaagctatgtgaata 33700289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 13216825 - 13216970
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||||||   | ||  ||||| | |||| ||||||||  |||| |||||| ||| |||||||||    
T  13216825 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatctttcatgctaatatttatatttatacattagttaaaaagtatggtcaaagta 13216924  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| | ||||||| || | || |  |||||  ||||||||||||||    
T  13216925 agtcaagtgaatagtgcacattgcaaaaattagacatgtattttga 13216970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 639 - 748
Target Start/End: Original strand, 36641962 - 36642075
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaat-attgtcaaagt 734  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||| | || |||||| | || ||||||||    
T  36641962 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatataagttaaaaagtaatggtcaaagt 36642061  T
Q  735 aagttatgtgaata 748  Q
    |||| | |||||||    
T  36642062 aagtcaagtgaata 36642075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 643 - 736
Target Start/End: Original strand, 3100603 - 3100699
Alignment:
Q  643 tttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaa 736  Q
    ||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||  |||| |||||| ||| ||||||||||    
T  3100603 tttaatattttgaaaatatttgtcgagacaaatcaatcaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaa 3100699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 639 - 681
Target Start/End: Original strand, 38958865 - 38958907
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    ||||||||||||||||||||||||| || ||||||||||||||    
T  38958865 aaaatttaatattttaaaaatatttgtcgagacaaatcaaaca 38958907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 647 - 688
Target Start/End: Original strand, 35303240 - 35303281
Alignment:
Q  647 atattttaaaaatatttatcaagacaaatcaaacattttata 688  Q
    |||||||||||||||| ||||||||||||||||||| |||||    
T  35303240 atattttaaaaatattcatcaagacaaatcaaacatcttata 35303281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 644 - 724
Target Start/End: Original strand, 40716632 - 40716715
Alignment:
Q  644 ttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaata 724  Q
    |||||||||| |||||||||||  ||||||||||   ||||| ||| ||||| | |||||||||||||| |||| |||||||||    
T  40716632 ttaatatttttaaaatatttattgagacaaatcaaacaacatcttacatgctaaaatttgtatttatatattagttaaaaaata 40716715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 653 - 748
Target Start/End: Original strand, 4270210 - 4270308
Alignment:
Q  653 taaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaata 748  Q
    ||||||||||| || ||||||||||   ||||| ||| ||| | | |||||||||||||  |||| |||||||||| |||||||||||| | |||||||    
T  4270210 taaaaatatttgtcgagacaaatcacacaacatattacatgttaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaata 4270308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 639 - 670
Target Start/End: Original strand, 3383513 - 3383544
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaaga 670  Q
    ||||||||||||||||||||||||||||||||    
T  3383513 aaaatttaatattttaaaaatatttatcaaga 3383544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 639 - 725
Target Start/End: Complemental strand, 9632313 - 9632224
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatat 725  Q
    ||||||| ||||||| |||||||| ||| ||||||||||   ||||| ||| ||||| | ||| |||||||||||||||  |||||||||    
T  9632313 aaaatttgatattttgaaaatattcatcgagacaaatcaaacaacatcttacatgctaacattagtatttatatgttagtgaaaaaatat 9632224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 639 - 682
Target Start/End: Complemental strand, 24524245 - 24524202
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaacat 682  Q
    ||||||||||||||| ||||||||| || |||||||||||||||    
T  24524245 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacat 24524202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 601 - 748
Target Start/End: Original strand, 32779997 - 32780144
Alignment:
Q  601 atcgttaatatatttagttatctatggtaaaggattgtaaaatttaatattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttg 700  Q
    ||||||||||| |||| || ||||| |||||  ||| ||||||||||  |||| |||||||||||| ||| ||||  | ||| ||| || || | ||||     
T  32779997 atcgttaatatttttaattgtctatagtaaaacattataaaatttaaccttttgaaaatatttatcgagataaattgagcatcttacatactaacattta 32780096  T
Q  701 tatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaata 748  Q
    |||||||||  ||| ||||| |||| || || |||||| |||||||||    
T  32780097 tatttatatactagttaaaatatatagttaaggtaagtcatgtgaata 32780144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 639 - 709
Target Start/End: Original strand, 32855566 - 32855639
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatat 709  Q
    ||||||| |||||||||||||||||||  ||||||||||   ||||| ||| ||||| | ||||||||||||||    
T  32855566 aaaatttgatattttaaaaatatttattgagacaaatcaaacaacatcttacatgctaacatttgtatttatat 32855639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 649 - 688
Target Start/End: Original strand, 35595530 - 35595569
Alignment:
Q  649 attttaaaaatatttatcaagacaaatcaaacattttata 688  Q
    ||||| |||||||||||||||||||||||||||| |||||    
T  35595530 attttgaaaatatttatcaagacaaatcaaacatattata 35595569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 639 - 681
Target Start/End: Complemental strand, 11637940 - 11637898
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    ||||||||||||||||||||||||| || ||| ||||||||||    
T  11637940 aaaatttaatattttaaaaatatttgtcgagataaatcaaaca 11637898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 639 - 681
Target Start/End: Original strand, 14522484 - 14522526
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    |||||||||||||||||||||||| |||||||| |||| ||||    
T  14522484 aaaatttaatattttaaaaatattcatcaagacgaatccaaca 14522526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 639 - 681
Target Start/End: Original strand, 22489377 - 22489419
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    ||||||||||||||| ||||||||| || ||||||||||||||    
T  22489377 aaaatttaatattttgaaaatatttgtcgagacaaatcaaaca 22489419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 731 - 772
Target Start/End: Complemental strand, 3448221 - 3448180
Alignment:
Q  731 aagtaagttatgtgaataatgtatatcgtgaaaatgtgacat 772  Q
    ||||| |||||||||||||||||||| || ||||||||||||    
T  3448221 aagtatgttatgtgaataatgtatattgtaaaaatgtgacat 3448180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 647 - 748
Target Start/End: Original strand, 43950322 - 43950422
Alignment:
Q  647 atattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaa 746  Q
    ||||||| |||||||| |||||||||||||  |||| |||||||||   |||||| | ||||| ||||   |||||| | ||||||||| ||||||||||    
T  43950322 atattttgaaaatattcatcaagacaaatc-gacatcttatatgctaccatttgtctatatatattagtagaaaaatttggtcaaagtatgttatgtgaa 43950420  T
Q  747 ta 748  Q
    ||    
T  43950421 ta 43950422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 4e-22; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 647 - 781
Target Start/End: Original strand, 41252878 - 41253012
Alignment:
Q  647 atattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaa 746  Q
    ||||||| |||||||| ||| ||||||||||||||| ||||||||| | |||||||||||||| |||| |||||||||| || |||||||| ||| ||||    
T  41252878 atattttgaaaatattcatcgagacaaatcaaacatcttatatgctaacatttgtatttatatattagttaaaaaatatggttaaagtaagctatatgaa 41252977  T
Q  747 taatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    || || | || || ||| || ||||| ||||||||    
T  41252978 tagtgcacattgtaaaattgcgacatatattttga 41253012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 639 - 741
Target Start/End: Original strand, 3430381 - 3430483
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagt 738  Q
    ||||||| ||||| | |||||||| ||| ||||||||||||||||||| ||||| | |||| |||| |||| |||| |||||||||| ||||||||||||    
T  3430381 aaaattttatattatgaaaatattaatcgagacaaatcaaacattttacatgctaatatttttattaatatattagttaaaaaatatggtcaaagtaagt 3430480  T
Q  739 tat 741  Q
    |||    
T  3430481 tat 3430483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 595 - 748
Target Start/End: Complemental strand, 25527604 - 25527450
Alignment:
Q  595 acttttatcgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaacattttatatgctt 693  Q
    ||||| ||||||||||| |||| |||||||  |||||  ||| ||||| |||||||||||  ||||||||||| | ||||||| ||||| ||| ||| |     
T  25527604 actttgatcgttaatatttttaattatctaaagtaaaaaattataaaaatttaatattttgtaaatatttatcgaaacaaatcgaacatcttacatgtta 25527505  T
Q  694 agatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaata 748  Q
    | |||||||||||||| | || |||||||||| ||| |||||||| |||||||||    
T  25527504 atatttgtatttatatatcagttaaaaaatatggtcgaagtaagtcatgtgaata 25527450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 604 - 738
Target Start/End: Complemental strand, 33415993 - 33415855
Alignment:
Q  604 gttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagattt 699  Q
    ||||||||||||| |||||||  |||||  ||| ||||| ||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | ||||    
T  33415993 gttaatatatttaattatctaaagtaaaaaattataaaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatattt 33415894  T
Q  700 gtatttatatgttagctaaaaaatattgtcaaagtaagt 738  Q
    |||||||||| |||| |||||| ||| ||||||||||||    
T  33415893 gtatttatatattagttaaaaagtatggtcaaagtaagt 33415855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 13499439 - 13499584
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  13499439 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 13499538  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| | ||||||| || | || |  |||||  ||||||||||||||    
T  13499539 agtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 13499584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 42490300 - 42490445
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  42490300 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 42490399  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| | ||||||| || | || |  |||||  ||||||||||||||    
T  42490400 agtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 42490445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 42761587 - 42761732
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || | ||||||||||||   | ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  42761587 aaaatttaatattttgaaaatatttgtcgaaacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 42761686  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| | ||||||| || | || || |||||  ||||||||||||||    
T  42761687 agtcaagtgaatagtgcacattgtaaaaattggacatgtattttga 42761732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 639 - 748
Target Start/End: Original strand, 27334835 - 27334947
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  27334835 aaaatttaatattttgaaaatatttttcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 27334934  T
Q  736 agttatgtgaata 748  Q
    ||| | |||||||    
T  27334935 agtcaagtgaata 27334947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 639 - 748
Target Start/End: Original strand, 39866245 - 39866357
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  39866245 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 39866344  T
Q  736 agttatgtgaata 748  Q
    ||| | |||||||    
T  39866345 agtcaagtgaata 39866357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 639 - 781
Target Start/End: Complemental strand, 6910492 - 6910347
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||||||   | ||| ||| | | |||||||||||||  |||| |||||||||| || ||||||    
T  6910492 aaaatttaatattttgaaaatatttttcgagacaaatcaaacaacatcttacatgttaatatttgtatttatacattagttaaaaaatatggttaaagta 6910393  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| | ||||||| |||| || || ||| |  ||||||||||||||    
T  6910392 agtcaagtgaatagtgtacattgtaaaagttggacatgtattttga 6910347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 27010578 - 27010723
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||| |||| |||||| | | |||||||||    
T  27010578 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtttggtcaaagta 27010677  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| | ||||||| || | || |  |||||  ||||||||||||||    
T  27010678 agtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 27010723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 639 - 748
Target Start/End: Complemental strand, 20765354 - 20765242
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||||||   | ||| ||| | | |||||||||||||| |||| |||||| ||| |||||||||    
T  20765354 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgttaatatttgtatttatatattagttaaaaagtatagtcaaagta 20765255  T
Q  736 agttatgtgaata 748  Q
    ||| | |||||||    
T  20765254 agtcaagtgaata 20765242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 639 - 748
Target Start/End: Complemental strand, 30213962 - 30213850
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||| |||| |||||| ||| |||||| ||    
T  30213962 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaaata 30213863  T
Q  736 agttatgtgaata 748  Q
    ||| | |||||||    
T  30213862 agtcaagtgaata 30213850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 639 - 779
Target Start/End: Original strand, 15332910 - 15333053
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||| ||||||| |||||||| ||| |||| |||||||||   | ||| ||||| | |||||||||||||| |||| |||||||| | ||||||| |    
T  15332910 aaaatttgatatttttaaaatattcatcgagaccaatcaaacaacatcttacatgctaacatttgtatttatatattagttaaaaaatttggtcaaagca 15333009  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtatttt 779  Q
    || |||||||||| || | || || ||| || ||||||||||||    
T  15333010 agctatgtgaatagtgcacattgtaaaattgcgacatgtatttt 15333053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 638 - 746
Target Start/End: Original strand, 23940468 - 23940576
Alignment:
Q  638 taaaatttaatattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaag 737  Q
    |||||||| |||||||||||||||| ||  ||||||||||||||| ||| ||| | | |||| ||||||||| |||| |||||||||  ||||| ||||     
T  23940468 taaaatttgatattttaaaaatattaattgagacaaatcaaacatcttacatgttaacatttttatttatatattagttaaaaaataaggtcaatgtaaa 23940567  T
Q  738 ttatgtgaa 746  Q
    |||| ||||    
T  23940568 ttatatgaa 23940576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 639 - 748
Target Start/End: Complemental strand, 21005451 - 21005339
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||| ||||||||| |||  |||||| ||| |||||||||    
T  21005451 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttatatttatatattaattaaaaagtatggtcaaagta 21005352  T
Q  736 agttatgtgaata 748  Q
    ||| | |||||||    
T  21005351 agtgaagtgaata 21005339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 639 - 744
Target Start/End: Complemental strand, 41943372 - 41943264
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||| |||||||||||||||| ||  ||||||||||||||   | ||||||  | | ||||||||||| || |||| ||||||||||||| ||| ||    
T  41943372 aaaatttgatattttaaaaatattcattgagacaaatcaaacaacatcttatatattaacatttgtatttaaatattagttaaaaaatattgttaaaata 41943273  T
Q  736 agttatgtg 744  Q
    |||||||||    
T  41943272 agttatgtg 41943264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 639 - 781
Target Start/End: Complemental strand, 33803680 - 33803534
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaa-tattgtcaaagt 734  Q
    ||||||||||||||| ||||||||| |||||||||||||   ||||| ||| | ||| | |||| ||||||||  |||| ||||||| ||| ||||||||    
T  33803680 aaaatttaatattttgaaaatatttgtcaagacaaatcaaacaacatcttacaagctaatatttatatttatacattagttaaaaaagtatggtcaaagt 33803581  T
Q  735 aagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    |||| | ||||||| || | || |  |||||  ||||||||||||||    
T  33803580 aagtcaagtgaatagtgcacattgcaaaaattagacatgtattttga 33803534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 639 - 738
Target Start/End: Complemental strand, 36227703 - 36227601
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||| ||||||||||||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||  |||  | |||||||| |||||||||    
T  36227703 aaaatataatattttaaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattaattgaaaaatatggtcaaagta 36227604  T
Q  736 agt 738  Q
    |||    
T  36227603 agt 36227601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 696 - 748
Target Start/End: Complemental strand, 44561882 - 44561830
Alignment:
Q  696 atttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaata 748  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| |||||||||    
T  44561882 atttgtatttatatgttagttaaaaagtatggtcaaagtaagtcatgtgaata 44561830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 639 - 781
Target Start/End: Complemental strand, 21797714 - 21797569
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||  |||| |||||| ||| |||||| ||    
T  21797714 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaaata 21797615  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    | | | ||||||| || | || |  |||||  ||||||||||||||    
T  21797614 aatcaagtgaatagtgcacattgcaaaaattggacatgtattttga 21797569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 641 - 751
Target Start/End: Complemental strand, 30057455 - 30057342
Alignment:
Q  641 aatttaatattttaaaaatatttatcaagacaaatcaaacatt---ttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaag 737  Q
    ||||| ||||||| |||||||| | | ||||||||| |||||    ||||||||| | |||||  ||||||| |||| |||||||||| || |||||| |    
T  30057455 aatttgatatttttaaaatattgaccgagacaaatcgaacatcatcttatatgctaacatttgcttttatatattagttaaaaaatatggttaaagtatg 30057356  T
Q  738 ttatgtgaataatg 751  Q
    ||||||||||||||    
T  30057355 ttatgtgaataatg 30057342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 603 - 681
Target Start/End: Complemental strand, 32221028 - 32220949
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    ||||||||| |||| |||||||  |||||  ||| ||||| ||||||||||||||||||||| || ||||||||||||||    
T  32221028 cgttaatatctttaattatctaaagtaaaaaattataaaaatttaatattttaaaaatatttgtcgagacaaatcaaaca 32220949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 639 - 779
Target Start/End: Original strand, 3020305 - 3020445
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||| |||||||||||||||||||| |||| |||||   ||||| ||||||||  | |||| ||||||||| || | ||||||  || || ||||||    
T  3020305 aaaatttgatattttaaaaatatttatcgagacgaatcaaacaacatattatatgcgaacatttatatttatatattggttaaaaa--atggttaaagta 3020402  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtatttt 779  Q
    | |||||||||||||  ||||| | ||| |||||| ||||||||    
T  3020403 aattatgtgaataatacatatcataaaattgtgac-tgtatttt 3020445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 639 - 721
Target Start/End: Complemental strand, 37766207 - 37766125
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaa 721  Q
    ||||| || |||||| ||||||||| |||||||||||||||||| ||| | ||| | | ||||||| ||||||||| ||||||    
T  37766207 aaaatgtagtattttgaaaatatttgtcaagacaaatcaaacatcttagaggctaatacttgtattcatatgttagttaaaaa 37766125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 639 - 748
Target Start/End: Original strand, 41751514 - 41751626
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||| ||||||| |||||||| ||| ||||| ||||||||   |  || ||||| | |||||||||||||| |||| ||||||||||  ||||||||    
T  41751514 aaaatttgatatttttaaaatattcatcgagacatatcaaacaacatcgtaaatgctaacatttgtatttatatattagttaaaaaatatgatcaaagta 41751613  T
Q  736 agttatgtgaata 748  Q
     ||||||| ||||    
T  41751614 tgttatgtaaata 41751626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 598 - 690
Target Start/End: Complemental strand, 20549096 - 20549003
Alignment:
Q  598 tttatcgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaacattttatatg 690  Q
    |||||| |||||||||||| ||||||||  ||||  ||| ||||| |||||||||||||||||||| ||| |||  |||| ||||| |||||||    
T  20549096 tttatctttaatatatttaattatctattttaaaaaattataaaaatttaatattttaaaaatattaatcgagaggaatctaacatcttatatg 20549003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 696 - 748
Target Start/End: Original strand, 27813452 - 27813504
Alignment:
Q  696 atttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaata 748  Q
    |||||||||||||| |||| |||||||||| |||||| |||| ||||||||||    
T  27813452 atttgtatttatatattagttaaaaaatatagtcaaaataagctatgtgaata 27813504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 748
Target Start/End: Original strand, 43581031 - 43581106
Alignment:
Q  672 aaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaata 748  Q
    |||||||||||||||||| |  | |||||| ||||||| |||| ||||||| ||| |||||||| ||||||||||||    
T  43581031 aaatcaaacattttatataccaacatttgtctttatatattag-taaaaaaaattatcaaagtaggttatgtgaata 43581106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 603 - 681
Target Start/End: Original strand, 43467809 - 43467888
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    ||||||||| |||| |||||||  |||||  ||| ||||| ||||||||||| ||||||||| || ||||||||||||||    
T  43467809 cgttaatatctttaattatctaaagtaaaaaattataaaagtttaatattttgaaaatatttgtcgagacaaatcaaaca 43467888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 684 - 778
Target Start/End: Complemental strand, 3017901 - 3017807
Alignment:
Q  684 ttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattt 778  Q
    ||||||||| | ||||||||||||||  ||| |||||||||| ||||||  ||||||||| |||| |  |||| || ||| | ||||||||||||    
T  3017901 ttatatgctaacatttgtatttatataatagttaaaaaatatggtcaaaacaagttatgttaatagttcatattgtcaaactatgacatgtattt 3017807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 639 - 681
Target Start/End: Original strand, 10437386 - 10437428
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||    
T  10437386 aaaatttaatattttaaaaatattcatcgagacaaatccaaca 10437428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 605 - 687
Target Start/End: Complemental strand, 20110564 - 20110482
Alignment:
Q  605 ttaatatatttagttatctatggtaaaggattgtaaaatttaatattttaaaaatatttatcaagacaaatcaaacattttat 687  Q
    |||||||||||| ||||||||    ||  ||| ||||| ||||||||||||||||||| || |||||||||| | ||||||||    
T  20110564 ttaatatatttaattatctataactaaaaattataaaaattaatattttaaaaatattgattaagacaaatcgatcattttat 20110482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 624 - 681
Target Start/End: Original strand, 20395635 - 20395693
Alignment:
Q  624 atggtaaaggattgtaaaattt-aatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    ||||||||  |||||||||||| ||||||||| ||||||||||  ||||||||||||||    
T  20395635 atggtaaaaaattgtaaaattttaatattttataaatatttattgagacaaatcaaaca 20395693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 639 - 677
Target Start/End: Original strand, 33128023 - 33128061
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca 677  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  33128023 aaaatttaatattttaaaaatatttatcgaaacaaatca 33128061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 639 - 681
Target Start/End: Original strand, 43181459 - 43181501
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    ||||||||||||||||||||||||| || |||||||| |||||    
T  43181459 aaaatttaatattttaaaaatatttgtcgagacaaattaaaca 43181501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 597 - 781
Target Start/End: Complemental strand, 54507842 - 54507654
Alignment:
Q  597 ttttatcgttaatatatttagttatctatggtaaaggattgtaaaat-ttaatattttaaaaatatttatcaagacaaatca---aacattttatatgct 692  Q
    ||||| ||||||||| |||| |||||||  |||||  ||| |||||  |||||||||||||||||||| |||| | ||||||   ||||| ||| |||||    
T  54507842 ttttaccgttaatatctttaattatctaaagtaaaaaattataaaaaattaatattttaaaaatatttgtcaacataaatcaaacaacatcttacatgct 54507743  T
Q  693 tagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
     | || ||||||||||  |||| |||||| |||  ||||| ||||| | ||||||| || |||| |  |||||  || |||||||||||    
T  54507742 aatatctgtatttatacattagttaaaaagtataatcaaaataagtcaagtgaatagtgcatattgcaaaaattggatatgtattttga 54507654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 668 - 748
Target Start/End: Original strand, 47164588 - 47164669
Alignment:
Q  668 agacaaatcaaacattttatatgcttagatttgtattt-atatgttagctaaaaaatattgtcaaagtaagttatgtgaata 748  Q
    ||||||||||||||| ||| || || | |||||||||| |||| |||| ||||||||||  | |||||||||||||| ||||    
T  47164588 agacaaatcaaacatcttacatactaacatttgtattttatatattagttaaaaaatatgattaaagtaagttatgtaaata 47164669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 6e-21; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 595 - 781
Target Start/End: Complemental strand, 3785723 - 3785533
Alignment:
Q  595 acttttatcgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatg 690  Q
    ||||| ||| ||||||| |||| |||| |||  |||| |||| ||||| ||| |||||||||||||||||||| ||||||||||||||   |  | |||     
T  3785723 actttgatcattaatatctttaattatatataataaaagattataaaaatttgatattttaaaaatatttatctagacaaatcaaacaacatcctgtata 3785624  T
Q  691 cttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    || | |||||||||||||| |||| |||||||||| ||||||||||  ||| |||||| || |||| |||||| | ||| |||||||||||    
T  3785623 ctaacatttgtatttatatattagttaaaaaatatggtcaaagtaaactatatgaatagtgcatattgtgaaattatgatatgtattttga 3785533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 603 - 781
Target Start/End: Complemental strand, 20885298 - 20885116
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatt 698  Q
    ||||||||| |||| |||||||  |||||  ||| ||||| ||||||||||| ||||||||| || ||||||||||||||   | ||| ||||| | |||    
T  20885298 cgttaatatctttaattatctaaagtaaaaaattataaaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatt 20885199  T
Q  699 tgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||||||||||  |||| |||||||||| |||||||||||| | ||||||| |  | || || |||||  ||||||||||||||    
T  20885198 tgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtccacattgtaaaaattggacatgtattttga 20885116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 639 - 781
Target Start/End: Complemental strand, 7439061 - 7438916
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||||||   | ||| ||||| | |||||||||||||  |||| |||||| ||| |||||| ||    
T  7439061 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaaata 7438962  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| | |||||||||| |||| |  |||||  ||||||||||||||    
T  7438961 agtcaagtgaataatgcatattgcaaaaattagacatgtattttga 7438916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 28061619 - 28061764
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  28061619 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 28061718  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| | ||||||| || | || |  |||||  ||||||||||||||    
T  28061719 agtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 28061764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 639 - 781
Target Start/End: Complemental strand, 36623466 - 36623321
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||||||   | ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  36623466 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 36623367  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| | ||||||| || | || |  |||||  ||||||||||||||    
T  36623366 agtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 36623321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 38851951 - 38852096
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaac---attttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || |||||||||||||   || ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  38851951 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaatatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 38852050  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| | ||||||| || | || |  |||||  ||||||||||||||    
T  38852051 agtcaagtgaatagtgcacattggaaaaattggacatgtattttga 38852096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 639 - 781
Target Start/End: Complemental strand, 47156185 - 47156040
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||||||   | ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  47156185 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 47156086  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| | ||||||| || | || |  |||||  ||||||||||||||    
T  47156085 agtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 47156040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 603 - 787
Target Start/End: Complemental strand, 41088782 - 41088594
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatt 698  Q
    |||||||||||||| |||||||  |||||  ||| ||||| ||||||||||||||||||||| || ||||||||||   ||||| ||| ||| | | |||    
T  41088782 cgttaatatatttaattatctaaagtaaaaaattataaaaatttaatattttaaaaatatttgtcgagacaaatcatgcaacatcttacatgttaatatt 41088683  T
Q  699 tgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttgagatgga 787  Q
    || |||||||  |||| |||||||||| |||||||||||| |  |||| | || |||| || ||| |  |||||||||||||| |||||    
T  41088682 tgcatttatacattagttaaaaaatatggtcaaagtaagtcagatgaacagtgcatattgtaaaatttggacatgtattttgaaatgga 41088594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 639 - 748
Target Start/End: Complemental strand, 7169281 - 7169172
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagt 738  Q
    ||||||||||||| | || || |||||| || ||||| |||||| ||||||| | | |||||||||||||| |||| |||||||||| |||||||||| |    
T  7169281 aaaatttaatattatgaatatctttatcgaggcaaattaaacatcttatatgttaatatttgtatttatatattagttaaaaaatatagtcaaagtaaat 7169182  T
Q  739 tatgtgaata 748  Q
     |||||||||    
T  7169181 catgtgaata 7169172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 6766653 - 6766799
Alignment:
Q  639 aaaatttaatattttaaa-aatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagt 734  Q
    ||||||| ||||||| || |||||| ||| ||||||||||||||   | ||| ||||| | ||||| |||||||  |||| |||||||||| |||||| |    
T  6766653 aaaatttgatattttgaataatattcatcgagacaaatcaaacaacatcttacatgctaacatttgcatttatacattagttaaaaaatatggtcaaaat 6766752  T
Q  735 aagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||||||||||||||||| | || || ||| || ||||||||||||||    
T  6766753 aagttatgtgaataatgcagattgtaaaattgcgacatgtattttga 6766799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 639 - 738
Target Start/End: Complemental strand, 48602594 - 48602492
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  48602594 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 48602495  T
Q  736 agt 738  Q
    |||    
T  48602494 agt 48602492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 32431462 - 32431607
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||| ||||| |||||||||||| ||||||||||||||   | ||| || || | |||||||||||||  |||| |||||| ||| |||||||||    
T  32431462 aaaatttaacattttgaaaatatttatcgagacaaatcaaacaacatcttacatactaatatttgtatttatacattagttaaaaagtatggtcaaagta 32431561  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| | |||||||||| | || |  ||||| |||||| ||||||||    
T  32431562 agtcaagtgaataatgcacattgcaaaaatttgacatatattttga 32431607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 639 - 748
Target Start/End: Original strand, 39130030 - 39130142
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||  |||| |||||||||| ||||||| |    
T  39130030 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagaa 39130129  T
Q  736 agttatgtgaata 748  Q
    ||| | |||||||    
T  39130130 agtcaagtgaata 39130142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 639 - 748
Target Start/End: Original strand, 40090022 - 40090134
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||| ||||||||||   | ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  40090022 aaaatttaatattttgaaaatatttgtcgagataaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 40090121  T
Q  736 agttatgtgaata 748  Q
    ||| | |||||||    
T  40090122 agtcaagtgaata 40090134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 639 - 751
Target Start/End: Complemental strand, 30342232 - 30342117
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaac---attttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| |||||||||||| |||||||||||||   || ||| || || | |||||||||||||  |||| |||||| ||| |||||||||    
T  30342232 aaaatttaatattttgaaaatatttatcgagacaaatcaaacgacatcttacatactaatatttgtatttatacattagttaaaaagtatagtcaaagta 30342133  T
Q  736 agttatgtgaataatg 751  Q
    | | | ||||||||||    
T  30342132 aatcaagtgaataatg 30342117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 639 - 791
Target Start/End: Original strand, 42890447 - 42890602
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||| |||| |||||| ||| |||||| ||    
T  42890447 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaaata 42890546  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttgagatggatgga 791  Q
    ||| |  |||||| || | || |  |||||  |||||||||||||| | |||||||    
T  42890547 agtcaaatgaatagtgcacattgcaaaaattggacatgtattttgaaacggatgga 42890602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 639 - 751
Target Start/End: Complemental strand, 8683973 - 8683861
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagt 738  Q
    |||||||| |||||| ||||||||| |  ||||||||||||||   | | |||| | |||||||||||||| |||| |||||| ||| ||||||||||||    
T  8683973 aaaatttactattttgaaaatatttgttgagacaaatcaaacaacatctttgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagt 8683874  T
Q  739 tatgtgaataatg 751  Q
     | ||||||||||    
T  8683873 caagtgaataatg 8683861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 603 - 737
Target Start/End: Complemental strand, 16778700 - 16778562
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatt 698  Q
    ||||||||| |||| |||||||  |||||  ||| ||||| ||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||    
T  16778700 cgttaatatctttaattatctaaagtaaaatattataaaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatt 16778601  T
Q  699 tgtatttatatgttagctaaaaaatattgtcaaagtaag 737  Q
    ||||||||||  |||| |||||| ||| |||||||||||    
T  16778600 tgtatttatacattagttaaaaattatggtcaaagtaag 16778562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 638 - 722
Target Start/End: Original strand, 24423697 - 24423781
Alignment:
Q  638 taaaatttaatattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaaa 722  Q
    |||||||| |||||||||||||||| |||| |||||||||||||| ||  ||| | |||||| ||||||||| |||| |||||||    
T  24423697 taaaatttgatattttaaaaatattcatcatgacaaatcaaacatcttgcatgataagatttatatttatattttagttaaaaaa 24423781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 639 - 779
Target Start/End: Original strand, 44594627 - 44594766
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagt 738  Q
    ||||||| || |||| |||||| | ||  |||||||| |||||| ||||||||| | ||| |||||||||| |||| ||||||||||  | ||| ||| |    
T  44594627 aaaatttgattttttgaaaatactcattgagacaaattaaacatcttatatgctaacatt-gtatttatatattagttaaaaaatatgattaaactaaat 44594725  T
Q  739 tatgtgaataatgtatatcgtgaaaatgtgacatgtatttt 779  Q
    ||||||||| ||| |||| || ||| |||||||||||||||    
T  44594726 tatgtgaatgatgcatattgtaaaattgtgacatgtatttt 44594766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 639 - 738
Target Start/End: Original strand, 46103474 - 46103576
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || | ||||||||||||   | ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  46103474 aaaatttaatattttgaaaatatttgtcgaaacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 46103573  T
Q  736 agt 738  Q
    |||    
T  46103574 agt 46103576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 604 - 738
Target Start/End: Complemental strand, 46480023 - 46479885
Alignment:
Q  604 gttaatatatttagttatctatggtaaaggattgt-aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagattt 699  Q
    ||||||||||||| |||||||  || ||  ||| | ||||||||||||||||||||||||| || ||||||||||   ||||| ||| ||||| | ||||    
T  46480023 gttaatatatttaattatctaaagtcaaaaattataaaaatttaatattttaaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatattt 46479924  T
Q  700 gtatttatatgttagctaaaaaatattgtcaaagtaagt 738  Q
    |||||||||  |||| |||||| | | ||||||||||||    
T  46479923 gtatttatacattagttaaaaattttggtcaaagtaagt 46479885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 27045512 - 27045657
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||| ||||||| |||||||| ||| || ||||| |||||   | ||||||||| | |||||||||||||| |||| |||||||||| |||||||||    
T  27045512 aaaatttgatattttgaaaatattcatcgaggcaaattaaacaacatcttatatgctaacatttgtatttatatattagttaaaaaatatggtcaaagta 27045611  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    |   ||||||||| | || || || ||| ||  |||||||||||||    
T  27045612 aaccatgtgaatagtatacattgtaaaattgcaacatgtattttga 27045657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 639 - 781
Target Start/End: Complemental strand, 41898146 - 41898001
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || |||||||| |||||   | ||| ||||| | |||||||||||||| |||| |||||| |||  ||||||||    
T  41898146 aaaatttaatattttgaaaatatttgtcgagacaaatgaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatgatcaaagta 41898047  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| | ||||||| || | || |  |||||  ||||||||||||||    
T  41898046 agtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 41898001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 603 - 751
Target Start/End: Original strand, 11502647 - 11502799
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaa---acattttatatgcttagatt 698  Q
    |||||||||||||| |||| ||  |||||  ||| ||||| ||||||||||| ||||||||| |  |||||||||||   |||| ||| ||||| | |||    
T  11502647 cgttaatatatttaattatataaagtaaaaaattataaaaatttaatattttgaaaatatttgtttagacaaatcaaacgacatcttacatgctaatatt 11502746  T
Q  699 tgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatg 751  Q
    ||||||||||  |||| |||||| |||  ||||||||||||| || |||||||    
T  11502747 tgtatttatacattagttaaaaagtatgatcaaagtaagttaagtcaataatg 11502799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 647 - 709
Target Start/End: Original strand, 28601583 - 28601645
Alignment:
Q  647 atattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatat 709  Q
    |||||||||||||||| ||| ||||||||||||||||||| ||||| | |||| |||||||||    
T  28601583 atattttaaaaatattcatcgagacaaatcaaacattttacatgctaacatttatatttatat 28601645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 603 - 681
Target Start/End: Complemental strand, 36585303 - 36585225
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    ||||||||| |||| |||||||  |||||  ||| |||||||||||||||| ||||||||| || ||||||||||||||    
T  36585303 cgttaatatctttaattatctaaagtaaaaaattttaaaatttaatattttgaaaatatttgtcgagacaaatcaaaca 36585225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 639 - 748
Target Start/End: Complemental strand, 40256215 - 40256103
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    |||||||| |||||| ||||||||| || ||||||||||||||   | ||| ||||| | |||||||||||||  |||| |||||| ||| |||||||||    
T  40256215 aaaatttactattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagta 40256116  T
Q  736 agttatgtgaata 748  Q
    ||| | |||||||    
T  40256115 agtcaagtgaata 40256103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 639 - 748
Target Start/End: Complemental strand, 44732170 - 44732058
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||  |||| |||||| |||  ||||||||    
T  44732170 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatgatcaaagta 44732071  T
Q  736 agttatgtgaata 748  Q
    ||| | |||||||    
T  44732070 agtcaagtgaata 44732058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 639 - 681
Target Start/End: Complemental strand, 45332075 - 45332033
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  45332075 aaaatttaatattttgaaaatatttatcaagacaaatcaaaca 45332033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 603 - 679
Target Start/End: Original strand, 46321219 - 46321296
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaa 679  Q
    ||||||||| |||| |||||||  |||||  ||| ||||| ||||||||||| |||||||||||||||||||||||||    
T  46321219 cgttaatatctttaattatctaaagtaaaaaattataaaaatttaatattttgaaaatatttatcaagacaaatcaaa 46321296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 697 - 781
Target Start/End: Original strand, 4131668 - 4131752
Alignment:
Q  697 tttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||||||||||||| |||| |||||||||| || ||||||||||||||||||| | || || || ||| || ||||| ||||||||    
T  4131668 tttgtatttatatattagttaaaaaatatggttaaagtaagttatgtgaatagtatacattgtaaaattgcgacatatattttga 4131752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 639 - 722
Target Start/End: Complemental strand, 21379902 - 21379816
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaa 722  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||  ||||||||||||    
T  21379902 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatacattagctaaaaaa 21379816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 603 - 781
Target Start/End: Original strand, 25566615 - 25566796
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatt 698  Q
    ||||||||| |||| |||||||  ||||| |||| ||||| ||||||||||||||||||||| |  ||||||||||||||   | | | ||||| | |||    
T  25566615 cgttaatatctttaattatctaaagtaaaagattataaaaatttaatattttaaaaatatttgttgagacaaatcaaacaacatctcacatgctaatatt 25566714  T
Q  699 tgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    |||||| |||  |||| || ||| ||| |||||||||||| | ||||||| || | || || |||||  ||||||||||||||    
T  25566715 tgtatt-atacattagttagaaagtatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaattggacatgtattttga 25566796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 35570153 - 35570303
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatc---aaacattttatatgcttagatttgtatttatatgttagct-----aaaaaatattgtca 730  Q
    ||||||| ||||||| |||||||||||| |||||||||    ||||| ||| ||||| | |||||||||| ||| |||| |     ||||||||| ||||    
T  35570153 aaaatttgatattttgaaaatatttatcgagacaaatcgtacaacatcttacatgctaaaatttgtatttgtatattagttaaaaaaaaaaatatggtca 35570252  T
Q  731 aagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||||||||| |||||||| || | || || ||| || ||||||||||||||    
T  35570253 aagtaagttttgtgaatagtgcacattgtaaaattgcgacatgtattttga 35570303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 678 - 742
Target Start/End: Original strand, 38767205 - 38767269
Alignment:
Q  678 aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatg 742  Q
    ||||| |||||| || | |||||||||||||| |||| |||||||||| ||||||||||||||||    
T  38767205 aacatcttatatactgacatttgtatttatatattagttaaaaaatatggtcaaagtaagttatg 38767269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 49101917 - 49102062
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||| |||| ||||||||||| ||| ||||||||||||||   | ||| ||||  | |||||||||||| | |||| ||||||||||    ||| ||    
T  49101917 aaaatttgatatcttaaaaatattcatcgagacaaatcaaacaacatcttacatgcaaaaatttgtatttatgtattagttaaaaaatatgacaaaaata 49102016  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    |||||| |||||| || |||| || ||| ||| |||||||||||||    
T  49102017 agttatatgaatagtgcatattgtaaaattgtaacatgtattttga 49102062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 639 - 681
Target Start/End: Complemental strand, 5084983 - 5084941
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    |||||||||||||||||||||||||||||| |||||| |||||    
T  5084983 aaaatttaatattttaaaaatatttatcaaaacaaattaaaca 5084941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 696 - 780
Target Start/End: Original strand, 16870644 - 16870728
Alignment:
Q  696 atttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttg 780  Q
    |||| ||||||||| |||| ||| |||||| ||||||||||||||| |||||| || |||| || |||  | |||||||||||||    
T  16870644 atttatatttatatattagttaacaaatatggtcaaagtaagttatttgaatagtgcatattgtaaaaccgcgacatgtattttg 16870728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 725
Target Start/End: Original strand, 39278437 - 39278524
Alignment:
Q  638 taaaatttaatattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaaatat 725  Q
    |||||||||||||||| |||||||||||  | | ||||  ||||||||| || || | |||| ||||||||| |||| ||||||||||    
T  39278437 taaaatttaatattttcaaaatatttattgaaataaattgaacattttacatactaacatttatatttatatattagttaaaaaatat 39278524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 639 - 681
Target Start/End: Original strand, 5788481 - 5788523
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    ||||||||||||||| ||||||||| || ||||||||||||||    
T  5788481 aaaatttaatattttgaaaatatttgtcgagacaaatcaaaca 5788523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 639 - 740
Target Start/End: Complemental strand, 42877544 - 42877440
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||   | ||| || || | |||| ||||||||  |||| |||||| ||| |||||||||    
T  42877544 aaaatttaatattttaaaaatctttgtagagacaaatcaaacaacatcttacattctaatatttttatttatacattagttaaaaagtatggtcaaagta 42877445  T
Q  736 agtta 740  Q
    |||||    
T  42877444 agtta 42877440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 651 - 751
Target Start/End: Original strand, 47525952 - 47526056
Alignment:
Q  651 tttaaaaatatttatcaagacaaatcaaac---attttatatgcttagatttgtatttatatgttagct-aaaaaatattgtcaaagtaagttatgtgaa 746  Q
    |||||||||||| ||||||||||||| |||   || ||| ||||| | |||||||||||||| |||| | |||||||||  |||||||||| || || ||    
T  47525952 tttaaaaatattcatcaagacaaatcgaacaagatcttaaatgctaacatttgtatttatatattagttaaaaaaatatgatcaaagtaagctaggtaaa 47526051  T
Q  747 taatg 751  Q
    |||||    
T  47526052 taatg 47526056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 669 - 738
Target Start/End: Complemental strand, 6174961 - 6174892
Alignment:
Q  669 gacaaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagt 738  Q
    |||||||||||||| ||| ||||| |  ||||||||||||  |||| |||||||||| |||| |||||||    
T  6174961 gacaaatcaaacatcttacatgctaatgtttgtatttatacattagttaaaaaatatggtcacagtaagt 6174892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 639 - 767
Target Start/End: Original strand, 24177073 - 24177202
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagct-aaaaaatattgtcaaagtaag 737  Q
    ||||| |||||||| |||||| |||||| | ||||||||||||| ||  ||||| | ||||   ||||||| | || | ||||||||  |||||| ||||    
T  24177073 aaaatataatatttcaaaaatgtttatcgatacaaatcaaacatctttcatgctaacatttacttttatatataagttaaaaaaatagagtcaaaataag 24177172  T
Q  738 ttatgtgaataatgtatatcgtgaaaatgt 767  Q
    ||||||||||| |||| || || |||||||    
T  24177173 ttatgtgaatagtgtacattgtaaaaatgt 24177202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 696 - 781
Target Start/End: Complemental strand, 36341718 - 36341633
Alignment:
Q  696 atttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    |||| |||||||||||||| |||||| ||| || ||| ||||| ||||||||| || | || |  |||||| ||||||||||||||    
T  36341718 atttatatttatatgttagttaaaaagtatcgttaaattaagtcatgtgaatagtgcacattgcaaaaatgcgacatgtattttga 36341633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 639 - 689
Target Start/End: Original strand, 40035469 - 40035521
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatc--aaacattttatat 689  Q
    |||||||||||||||||||||||  ||| |||||||||  |||||||||||||    
T  40035469 aaaatttaatattttaaaaatatccatcgagacaaatccaaaacattttatat 40035521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 597 - 681
Target Start/End: Original strand, 41796717 - 41796802
Alignment:
Q  597 ttttatcgttaatatatttagttatctatggtaaaggattgt-aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    ||||||| ||||||||||||| ||| ||| | |||  ||| | |||||||||||||||||||||||| ||| ||| ||||| ||||    
T  41796717 ttttatctttaatatatttagctatttattggaaaatattatgaaaatttaatattttaaaaatattcatcgagataaatctaaca 41796802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 2e-20; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 678 - 781
Target Start/End: Complemental strand, 11931807 - 11931704
Alignment:
Q  678 aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtatt 777  Q
    ||||| ||| ||||| | |||||||||||||| |||| |||||||||| ||||||||||||||| ||||||||| |||| || ||| || ||||||||||    
T  11931807 aacatcttaaatgctaacatttgtatttatatattagttaaaaaatatggtcaaagtaagttatatgaataatgcatattgtaaaattgcgacatgtatt 11931708  T
Q  778 ttga 781  Q
    ||||    
T  11931707 ttga 11931704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 2183064 - 2183206
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagt 738  Q
    ||||||||||||||| ||||||||| || ||||||||||||||| ||| ||||| | ||||||||| |||  |||| |||||| ||| ||||||||||||    
T  2183064 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacatcttacatgctaatatttgtattcatacattagttaaaaagtatggtcaaagtaagt 2183163  T
Q  739 tatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
     | ||||||| || | || |  |||||  ||||||||||||||    
T  2183164 caagtgaatagtgcacattgcaaaaattggacatgtattttga 2183206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 639 - 748
Target Start/End: Complemental strand, 6223224 - 6223112
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaacatt---ttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || |||||||||||||||    ||| ||||| | |||||||||||||| |||| |||||||||| |||||||||    
T  6223224 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacatcatcttacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagta 6223125  T
Q  736 agttatgtgaata 748  Q
    ||| | |||||||    
T  6223124 agtcaagtgaata 6223112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 639 - 748
Target Start/End: Original strand, 13125249 - 13125361
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaac---attttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    |||||||||||||||||||||||||||| |||||||||||||   || ||| ||||| | |||||||||||||  |||| |||||||||| || ||||||    
T  13125249 aaaatttaatattttaaaaatatttatcgagacaaatcaaacaatatcttagatgctaatatttgtatttatacattagttaaaaaatatggtgaaagta 13125348  T
Q  736 agttatgtgaata 748  Q
    ||| | |||||||    
T  13125349 agtcaagtgaata 13125361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 639 - 791
Target Start/End: Complemental strand, 7608207 - 7608052
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||||||   | ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  7608207 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 7608108  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttgagatggatgga 791  Q
    ||| | ||||||| || | || |  |||||  |||||||||||||| | |||||||    
T  7608107 agtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggatgga 7608052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 655 - 781
Target Start/End: Complemental strand, 24252101 - 24251973
Alignment:
Q  655 aaaatatttatcaagacaaatcaaacat--tttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgt 752  Q
    |||||||| ||  ||||||||||||||   |||| ||||| | |||||||||||||| |||| |||||||||| |||||| |||||||||||||||||      
T  24252101 aaaatattcattgagacaaatcaaacaacatttacatgctaacatttgtatttatatattagttaaaaaatatggtcaaaataagttatgtgaataatac 24252002  T
Q  753 atatcgtgaaaatgtgacatgtattttga 781  Q
    |||| || ||| ||||| |||||||||||    
T  24252001 atattgtaaaattgtgaaatgtattttga 24251973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 639 - 751
Target Start/End: Original strand, 36177684 - 36177797
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagct-aaaaaatattgtcaaagtaag 737  Q
    |||||||||||||||||||||||||||  ||||||||||||||| ||| ||| | | |||| ||||||||| |||| | ||||||||| |||||| |||     
T  36177684 aaaatttaatattttaaaaatatttatttagacaaatcaaacatcttagatgttaatatttttatttatatattagttaaaaaaatatggtcaaaataaa 36177783  T
Q  738 ttatgtgaataatg 751  Q
    | ||||||||||||    
T  36177784 tcatgtgaataatg 36177797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 603 - 781
Target Start/End: Complemental strand, 7800042 - 7799860
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatt 698  Q
    ||||||||| |||| |||||||  |||||  ||| ||||| ||||||||||| |||||||||  | ||||||||||||||   | ||| ||||| | |||    
T  7800042 cgttaatatctttaattatctaaagtaaaaaattataaaaatttaatattttgaaaatatttgccgagacaaatcaaacaacatcttacatgctaacatt 7799943  T
Q  699 tgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||||||||||| |||| |||||| ||  |||||||||||| ||||||||| || | || |  |||||| ||||||||||||||    
T  7799942 tgtatttatatattagttaaaaagtagggtcaaagtaagtcatgtgaatagtgcacattgcaaaaatgcgacatgtattttga 7799860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 603 - 781
Target Start/End: Complemental strand, 44365352 - 44365170
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgt-aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatt 698  Q
    ||||||||| |||| |||||||  |||||  ||| | ||||||||||||||| ||||||||| || ||||||||||||||   | ||| ||||| | |||    
T  44365352 cgttaatatctttaattatctaaagtaaaaaattatgaaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatt 44365253  T
Q  699 tgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||||||||||  |||| |||||| ||| |||||||||||| | ||||||| || |||| |  |||||  ||||||||||||||    
T  44365252 tgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcatattgcaaaaattggacatgtattttga 44365170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 639 - 781
Target Start/End: Complemental strand, 5405154 - 5405009
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||||||   | ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  5405154 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 5405055  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| | ||||||| || | || |  |||||  ||||||||||||||    
T  5405054 agtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 5405009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 8042126 - 8042271
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  8042126 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 8042225  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| | ||||||| || | || |  |||||  ||||||||||||||    
T  8042226 agtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 8042271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 639 - 791
Target Start/End: Original strand, 9006887 - 9007043
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaacattttatatgctt----agatttgtatttatatgttagctaaaaaatattgtcaaagt 734  Q
    ||||||| ||||||| |||||||| ||| |||||||| |||||| ||| |||| |    | |||||||||||||  |||| |||||||||| ||||||||    
T  9006887 aaaatttgatattttgaaaatattgatcgagacaaatgaaacatcttacatgcatgctaacatttgtatttataaattagttaaaaaatatggtcaaagt 9006986  T
Q  735 aagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttgagatggatgga 791  Q
    ||| ||  ||||||||| | || || ||| || |||||||||||||| |||||||||    
T  9006987 aagctacatgaataatgcacattgtaaaattgcgacatgtattttgaaatggatgga 9007043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 696 - 779
Target Start/End: Complemental strand, 16865152 - 16865069
Alignment:
Q  696 atttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtatttt 779  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| || |||||| ||||||| || |||||| ||||||||||||    
T  16865152 atttgtatttatatgttagttaaaaagtatcgtcaaagtaagtcatatgaatattgtatattgtaaaaatgcgacatgtatttt 16865069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 639 - 781
Target Start/End: Original strand, 19141170 - 19141315
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| || ||||||||||   ||||| ||| ||||| | |||||||||||||| |||| |||||| ||| |||||||||    
T  19141170 aaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagta 19141269  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttga 781  Q
    ||| | ||||||| || | || |  |||||  ||||||||||||||    
T  19141270 agtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 19141315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 639 - 748
Target Start/End: Original strand, 22839031 - 22839143
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||| ||||||| |||||||| ||| ||||||||||||||   | ||||||||| | ||||  ||||||||  ||| |||||||||| |||||||||    
T  22839031 aaaatttgatattttgaaaatattcatcgagacaaatcaaacaacatcttatatgctaacattttaatttatatactagttaaaaaatatggtcaaagta 22839130  T
Q  736 agttatgtgaata 748  Q
    |||||||||||||    
T  22839131 agttatgtgaata 22839143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 696 - 787
Target Start/End: Original strand, 43444704 - 43444795
Alignment:
Q  696 atttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttgagatgga 787  Q
    |||||||||||||| |||| |||||||||| ||||||| || |||||||||||||| | || || ||| || |||||||||||||| |||||    
T  43444704 atttgtatttatatattagttaaaaaatatggtcaaagaaaattatgtgaataatgcacattgtaaaattgcgacatgtattttgaaatgga 43444795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 603 - 738
Target Start/End: Original strand, 9172213 - 9172352
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatt 698  Q
    ||||||||| |||| |||||||  |||||  ||| ||||| ||||||||||| |||||||||||| || |||||||||||   | ||| ||||| |  ||    
T  9172213 cgttaatatctttaattatctaaagtaaaaaattataaaagtttaatattttgaaaatatttatcgaggcaaatcaaacaacatcttacatgctaacttt 9172312  T
Q  699 tgtatttatatgttagctaaaaaatattgtcaaagtaagt 738  Q
    ||||||||||  |||| |||||||||| ||||||||||||    
T  9172313 tgtatttatacattagttaaaaaatatggtcaaagtaagt 9172352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 603 - 738
Target Start/End: Original strand, 11841660 - 11841799
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatt 698  Q
    ||||||||| |||| |||||||  |||||  ||| ||||| ||||||||||||||| ||||| || ||||||||||   ||||| ||| ||||| | |||    
T  11841660 cgttaatatctttaattatctaaagtaaaaaattataaaaatttaatattttaaaagtatttgtcgagacaaatcaaacaacatcttacatgctaatatt 11841759  T
Q  699 tgtatttatatgttagctaaaaaatattgtcaaagtaagt 738  Q
    ||||||||||  |||| |||||| ||| ||||||||||||    
T  11841760 tgtatttatacattagttaaaaagtatggtcaaagtaagt 11841799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 639 - 751
Target Start/End: Complemental strand, 38292110 - 38291995
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||| ||||||| |||||||| ||  ||||||||||||||   | ||| ||| | | ||||||||||||||  ||| |||||||||| |||||||||    
T  38292110 aaaatttgatattttgaaaatattcattgagacaaatcaaacaacatcttacatgttaacatttgtatttatatactagttaaaaaatatggtcaaagta 38292011  T
Q  736 agttatgtgaataatg 751  Q
    |||||| |||||||||    
T  38292010 agttatctgaataatg 38291995  T

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Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 649 - 736
Target Start/End: Complemental strand, 42133897 - 42133810
Alignment:
Q  649 attttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaa 736  Q
    ||||| |||||||||||| ||| ||||||||||| ||  ||||| | |||||||||||||| |||| ||||||||||  |||||||||    
T  42133897 attttgaaaatatttatcgagataaatcaaacatctttcatgctaacatttgtatttatatattagttaaaaaatatgatcaaagtaa 42133810  T

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Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 639 - 737
Target Start/End: Complemental strand, 44645028 - 44644927
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| ||||||||||| |   ||||| ||||||| | | |||| ||||||||| |||| |||||| ||| |||||||||    
T  44645028 aaaatttaatattttgaaaatatttgtcaagacaaattaaacaacatcttatatgttaatatttatatttatatattagttaaaaagtatggtcaaagta 44644929  T
Q  736 ag 737  Q
    ||    
T  44644928 ag 44644927  T

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Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 639 - 681
Target Start/End: Complemental strand, 32774749 - 32774707
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  32774749 aaaatttaatattttaaaaatatttgtcaagacaaatcaaaca 32774707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 639 - 692
Target Start/End: Original strand, 13398903 - 13398956
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaacattttatatgct 692  Q
    ||||||| |||||||||||||||||| | ||||||||| |||||||||||||||    
T  13398903 aaaatttgatattttaaaaatatttaccgagacaaatccaacattttatatgct 13398956  T

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Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 647 - 709
Target Start/End: Complemental strand, 34248622 - 34248560
Alignment:
Q  647 atattttaaaaatatttatcaagacaaatcaaacattttatatgcttagatttgtatttatat 709  Q
    ||||||| |||||||| ||| ||||||||||||||| ||| ||||| | ||||||||||||||    
T  34248622 atattttgaaaatattcatcgagacaaatcaaacatcttacatgctaacatttgtatttatat 34248560  T

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Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 604 - 788
Target Start/End: Complemental strand, 36072368 - 36072180
Alignment:
Q  604 gttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaa---cattttatatgcttagattt 699  Q
    |||||||| ||||||||||||  |||||  ||| ||||| ||| ||| ||| |||||||||    ||||||||||||   ||| ||| ||||| | ||||    
T  36072368 gttaatatctttagttatctaaagtaaaaaattataaaaattttatactttcaaaatatttggtgagacaaatcaaataacatcttacatgctaatattt 36072269  T
Q  700 gtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttgagatggat 788  Q
     ||||||||  |||| ||||||||||  ||||||||||| |  |||||| || |||| || |||||  |||||||||||||| ||||||    
T  36072268 atatttatacattagttaaaaaatatgatcaaagtaagtcaaatgaatagtgcatattgtaaaaattggacatgtattttgaaatggat 36072180  T

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Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 638 - 731
Target Start/End: Complemental strand, 38839232 - 38839136
Alignment:
Q  638 taaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaa 731  Q
    |||||||| ||| ||| |||||||| ||| ||| ||||||   ||||| ||||||||| | |||||||||||||| |||| |||||||||| |||||    
T  38839232 taaaatttgatagtttgaaaatattcatcgagagaaatcatacaacatcttatatgctaacatttgtatttatatattagttaaaaaatatggtcaa 38839136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 647 - 689
Target Start/End: Original strand, 39989920 - 39989962
Alignment:
Q  647 atattttaaaaatatttatcaagacaaatcaaacattttatat 689  Q
    |||||||||||||||||||||||||||||| ||||| ||||||    
T  39989920 atattttaaaaatatttatcaagacaaatccaacatcttatat 39989962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 643 - 771
Target Start/End: Complemental strand, 32887060 - 32886929
Alignment:
Q  643 tttaatattttaaaaatatttatcaagacaaatcaaa---cattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagtt 739  Q
    ||||||||||| |||||||||||||||| ||||  ||   ||| |||  || | | |||| ||||| |||||||| || |||||||  | ||||||||||    
T  32887060 tttaatattttgaaaatatttatcaagataaattgaataacatcttacgtgttaatatttatatttgtatgttagttagaaaatatgattaaagtaagtt 32886961  T
Q  740 atgtgaataatgtatatcgtgaaaatgtgaca 771  Q
    ||||||||||||| |||  | |||||||||||    
T  32886960 atgtgaataatgtctattataaaaatgtgaca 32886929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 696 - 740
Target Start/End: Complemental strand, 19262778 - 19262734
Alignment:
Q  696 atttgtatttatatgttagctaaaaaatattgtcaaagtaagtta 740  Q
    |||||||||||||| |||| |||||||||| ||||||||||||||    
T  19262778 atttgtatttatatattagttaaaaaatatggtcaaagtaagtta 19262734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 711 - 783
Target Start/End: Complemental strand, 34248409 - 34248337
Alignment:
Q  711 ttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttgaga 783  Q
    |||| |||||||||| ||||||||||| |||||||||| || ||||  | ||| |||||| ||||||||||||    
T  34248409 ttagttaaaaaatatggtcaaagtaagctatgtgaatagtgcatatattaaaattgtgacgtgtattttgaga 34248337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 639 - 690
Target Start/End: Complemental strand, 5030438 - 5030387
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaacattttatatg 690  Q
    |||||||||||||||||||||||| ||| |||| |||| ||||| |||||||    
T  5030438 aaaatttaatattttaaaaatattcatcgagacgaatccaacatcttatatg 5030387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 639 - 682
Target Start/End: Complemental strand, 22701071 - 22701028
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaacat 682  Q
    |||||||||||||| |||||||||||| |||||||||| |||||    
T  22701071 aaaatttaatatttaaaaaatatttattaagacaaatccaacat 22701028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 595 - 681
Target Start/End: Original strand, 33228504 - 33228588
Alignment:
Q  595 acttttatcgttaatatatttagttatctatggtaaaggattgtaaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    ||||| |||||||||||||||| |||||||   ||||  ||   ||||||||||||||| |||||||||||| ||||||||| ||||    
T  33228504 actttgatcgttaatatatttaattatctagaataaaaaata--aaaatttaatattttgaaaatatttatcgagacaaatcgaaca 33228588  T

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Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 603 - 681
Target Start/End: Original strand, 36719391 - 36719470
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    ||||||||| |||| |||||||  |||||  ||| ||||| ||||||||||| ||||||||| || ||||||||||||||    
T  36719391 cgttaatatctttaattatctaaagtaaaaaattataaaaatttaatattttgaaaatatttgtcgagacaaatcaaaca 36719470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 639 - 681
Target Start/End: Complemental strand, 44283436 - 44283394
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    |||||||||||||||||||||||||||| |||| |||| ||||    
T  44283436 aaaatttaatattttaaaaatatttatcgagacgaatccaaca 44283394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 698 - 751
Target Start/End: Complemental strand, 7666186 - 7666133
Alignment:
Q  698 ttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatg 751  Q
    |||||||||||| |||| ||||| |||| |||||||||| |||| |||||||||    
T  7666186 ttgtatttatatattagataaaatatatggtcaaagtaaattatatgaataatg 7666133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 656 - 781
Target Start/End: Original strand, 9553842 - 9553965
Alignment:
Q  656 aaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgt 752  Q
    ||||||||||| ||||||||| ||||   ||||| ||| | | ||||| |||||||| |||| ||||||||   |||||||||||||||    |||||||    
T  9553842 aaatatttatcgagacaaatcgaacaacattttacatgttaatatttg-atttatatattagttaaaaaatgcggtcaaagtaagttat----ataatgt 9553936  T
Q  753 atatcgtgaaaatgtgacatgtattttga 781  Q
    | || || |||||| ||||||||||||||    
T  9553937 acattgtaaaaatgcgacatgtattttga 9553965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 644 - 681
Target Start/End: Original strand, 23886799 - 23886836
Alignment:
Q  644 ttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  23886799 ttaatattttaaaaatatttatcaagacgaatccaaca 23886836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 601 - 681
Target Start/End: Complemental strand, 33607569 - 33607488
Alignment:
Q  601 atcgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaaca 681  Q
    ||||||||||| |||| |||||||  |||||  ||| ||||| ||||||||||| ||||||||| || |||||||| |||||    
T  33607569 atcgttaatatctttaattatctaaagtaaaaaattataaaaatttaatattttgaaaatatttgtcgagacaaataaaaca 33607488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 657 - 781
Target Start/End: Complemental strand, 39358286 - 39358159
Alignment:
Q  657 aatatttatcaagacaaatcaaa---cattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgta 753  Q
    ||||||| || ||||||||||||   ||| ||| ||||| | |||||||||||||  |||| |||||| ||| |||||||||||| | ||||||| || |    
T  39358286 aatatttgtcgagacaaatcaaagaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgca 39358187  T
Q  754 tatcgtgaaaatgtgacatgtattttga 781  Q
     || |  |||||  ||||||||||||||    
T  39358186 cattgcaaaaattggacatgtattttga 39358159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 639 - 748
Target Start/End: Original strand, 44563102 - 44563214
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaa--acattttatatgcttagatttgtatttatatgttagct-aaaaaatattgtcaaagta 735  Q
    ||||||| ||||||| |||||||||||  ||| |||||||  ||||| || ||||| | || ||||||||||| |||  | |||||||||  ||||||||    
T  44563102 aaaatttgatattttgaaaatatttattgagaaaaatcaaacacattctacatgctaacatatgtatttatatattaattaaaaaaatatgatcaaagta 44563201  T
Q  736 agttatgtgaata 748  Q
    |||||| ||||||    
T  44563202 agttatatgaata 44563214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 678 - 777
Target Start/End: Original strand, 8979 - 9078
Alignment:
Q  678 aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtatt 777  Q
    ||||| ||| ||||| | |||||||||||||| |||| |||||||| | ||||||||||||||||||||||||| |||| || ||| ||||| |||||||    
T  8979 aacatcttacatgctaacatttgtatttatatattagttaaaaaatgtggtcaaagtaagttatgtgaataatgcatattgtaaaattgtgaaatgtatt 9078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 678 - 777
Target Start/End: Original strand, 138176 - 138275
Alignment:
Q  678 aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtatt 777  Q
    ||||| ||| ||||| | |||||||||||||| |||| |||||||| | ||||||||||||||||||||||||| |||| || ||| ||||| |||||||    
T  138176 aacatcttacatgctaacatttgtatttatatattagttaaaaaatgtggtcaaagtaagttatgtgaataatgcatattgtaaaattgtgaaatgtatt 138275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 46; Significance: 9e-17; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 638 - 748
Target Start/End: Complemental strand, 4108 - 3994
Alignment:
Q  638 taaaatttaatattttaaaaatatttatcaagacaaatcaaacatt----ttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaag 733  Q
    |||||| | ||||||| |||||||||||| |||||||||||| | |    ||| ||||| | |||||||||||||| |||| |||||||||| |||||||    
T  4108 taaaatgtgatattttgaaaatatttatcgagacaaatcaaaaaataatcttacatgctaacatttgtatttatatattagttaaaaaatatggtcaaag 4009  T
Q  734 taagttatgtgaata 748  Q
    |||| ||||||||||    
T  4008 taagctatgtgaata 3994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 676 - 748
Target Start/End: Original strand, 28796 - 28868
Alignment:
Q  676 caaacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaata 748  Q
    ||||||| ||||||||| | |||||||||||||  |||| |||||||||| ||||||||||| ||||||||||    
T  28796 caaacatcttatatgctaatatttgtatttataaattagttaaaaaatatggtcaaagtaagctatgtgaata 28868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 678 - 777
Target Start/End: Complemental strand, 22896 - 22797
Alignment:
Q  678 aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtatt 777  Q
    ||||| ||| ||||| | |||||||||||||| | || |||||||| | |||||| |||||||||||||||||| |||| || ||| ||||| |||||||    
T  22896 aacatcttacatgctaacatttgtatttatatatgagttaaaaaatgtggtcaaaataagttatgtgaataatgcatattgtaaaattgtgaaatgtatt 22797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 603 - 748
Target Start/End: Original strand, 100714 - 100863
Alignment:
Q  603 cgttaatatatttagttatctatggtaaaggattgtaaaa-tttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatt 698  Q
    ||||||||| |||| |||||||  |||||  ||| ||||| ||||||||||| ||||||||| || ||||||||||||||   | ||| | ||| | |||    
T  100714 cgttaatatctttaattatctaaagtaaaaaattataaaaatttaatattttgaaaatatttgtcgagacaaatcaaacaacatcttacacgctaatatt 100813  T
Q  699 tgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaata 748  Q
    ||||||||||  |||| |||||| ||| |||||||||||| | |||||||    
T  100814 tgtatttatacattagttaaaaattatggtcaaagtaagtcaagtgaata 100863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 639 - 787
Target Start/End: Complemental strand, 71118 - 70968
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    ||||||||||||||| ||||||||| |  ||||||||||   ||||| ||| ||||| | |||||||||||||  |||| | |||||||| |||||| ||    
T  71118 aaaatttaatattttgaaaatatttgttgagacaaatcaaacaacatcttaaatgctaatatttgtatttatacattag-ttaaaaatatggtcaaaata 71020  T
Q  736 agttatgtgaataatgtatatcgtgaaaatgtgacatgtattttgagatgga 787  Q
    ||| | ||||||| || |||| |  |||||  |||||||||||||| |||||    
T  71019 agtcaagtgaatagtgcatattgcaaaaattggacatgtattttgaaatgga 70968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 639 - 739
Target Start/End: Original strand, 53524 - 53627
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatca---aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    |||||||||||||||||||||||||||| | ||||||||   ||||| ||  ||||| | ||||||| |||||| |||| ||||||||||  |||||| |    
T  53524 aaaatttaatattttaaaaatatttatcgaaacaaatcaaacaacatcttgcatgctaaaatttgtaattatatattagttaaaaaatatgatcaaagca 53623  T
Q  736 agtt 739  Q
    ||||    
T  53624 agtt 53627  T

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Target: scaffold0018 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 639 - 738
Target Start/End: Original strand, 67873 - 67975
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatcaaaca---ttttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagta 735  Q
    |||||| |||||||||||||||||| || ||||||||||||||   | ||| ||| | | |||||||||||||  |||| |||||| ||| |||||||||    
T  67873 aaaattcaatattttaaaaatatttgtcgagacaaatcaaacaacatcttacatgttaatatttgtatttatacattagttaaaaagtatggtcaaagta 67972  T
Q  736 agt 738  Q
    |||    
T  67973 agt 67975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 639 - 676
Target Start/End: Complemental strand, 38517 - 38480
Alignment:
Q  639 aaaatttaatattttaaaaatatttatcaagacaaatc 676  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  38517 aaaatttaatattttaaaaatattcatcgagacaaatc 38480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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