View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20902_high_16 (Length: 292)

Name: NF20902_high_16
Description: NF20902
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20902_high_16
NF20902_high_16
[»] chr6 (26 HSPs)
chr6 (10-169)||(18155885-18156044)
chr6 (10-169)||(18155311-18155470)
chr6 (10-169)||(23002095-23002252)
chr6 (10-169)||(23786138-23786295)
chr6 (10-169)||(23001523-23001678)
chr6 (10-169)||(23786712-23786867)
chr6 (10-169)||(21039876-21040034)
chr6 (10-169)||(21084927-21085085)
chr6 (10-143)||(21062994-21063125)
chr6 (178-291)||(19872024-19872137)
chr6 (178-291)||(18404268-18404381)
chr6 (178-291)||(21765648-21765761)
chr6 (178-291)||(22437705-22437812)
chr6 (178-291)||(23082259-23082372)
chr6 (221-291)||(2871137-2871207)
chr6 (221-291)||(25116436-25116506)
chr6 (182-291)||(5835563-5835672)
chr6 (227-291)||(24292116-24292180)
chr6 (221-291)||(28259532-28259602)
chr6 (221-291)||(28286314-28286384)
chr6 (221-291)||(28313506-28313576)
chr6 (221-291)||(28338281-28338351)
chr6 (182-262)||(25755971-25756051)
chr6 (180-260)||(25958116-25958196)
chr6 (211-291)||(27206488-27206568)
chr6 (211-291)||(27242660-27242740)
[»] scaffold0490 (1 HSPs)
scaffold0490 (178-292)||(892-1006)
[»] scaffold0501 (1 HSPs)
scaffold0501 (178-291)||(843-956)
[»] scaffold0411 (1 HSPs)
scaffold0411 (178-291)||(9412-9525)
[»] scaffold0540 (1 HSPs)
scaffold0540 (178-291)||(10070-10183)
[»] scaffold0358 (1 HSPs)
scaffold0358 (178-291)||(9948-10061)
[»] scaffold0218 (1 HSPs)
scaffold0218 (178-291)||(23916-24029)
[»] scaffold0090 (1 HSPs)
scaffold0090 (178-291)||(30189-30302)
[»] chr2 (21 HSPs)
chr2 (178-291)||(23039347-23039460)
chr2 (178-291)||(22741693-22741806)
chr2 (178-291)||(23030364-23030477)
chr2 (178-291)||(24679090-24679203)
chr2 (178-291)||(22732501-22732614)
chr2 (178-291)||(23028189-23028302)
chr2 (178-291)||(20321584-20321703)
chr2 (220-291)||(23104459-23104530)
chr2 (178-291)||(23065978-23066091)
chr2 (178-291)||(23075428-23075541)
chr2 (182-291)||(21319730-21319839)
chr2 (211-262)||(23115815-23115866)
chr2 (178-266)||(24816591-24816679)
chr2 (211-291)||(24873481-24873560)
chr2 (182-291)||(22462208-22462317)
chr2 (178-232)||(24704268-24704322)
chr2 (227-291)||(22322072-22322136)
chr2 (221-291)||(16932150-16932220)
chr2 (221-291)||(41605813-41605883)
chr2 (211-291)||(24656385-24656465)
chr2 (227-291)||(24713683-24713747)
[»] scaffold0423 (1 HSPs)
scaffold0423 (178-291)||(822-935)
[»] scaffold0403 (1 HSPs)
scaffold0403 (178-291)||(15912-16025)
[»] scaffold0114 (1 HSPs)
scaffold0114 (178-291)||(16539-16652)
[»] scaffold0081 (2 HSPs)
scaffold0081 (178-291)||(22606-22719)
scaffold0081 (178-291)||(38030-38143)
[»] scaffold0042 (1 HSPs)
scaffold0042 (178-291)||(36010-36123)
[»] scaffold0309 (1 HSPs)
scaffold0309 (178-273)||(20097-20192)
[»] chr8 (18 HSPs)
chr8 (178-289)||(19982005-19982116)
chr8 (178-291)||(18880287-18880400)
chr8 (178-291)||(21163160-21163273)
chr8 (178-291)||(21390522-21390635)
chr8 (178-291)||(21779848-21779961)
chr8 (181-291)||(6518411-6518521)
chr8 (180-291)||(21672555-21672666)
chr8 (178-240)||(17354579-17354641)
chr8 (178-291)||(22420523-22420636)
chr8 (211-291)||(17829600-17829680)
chr8 (221-291)||(22116808-22116878)
chr8 (182-291)||(15537425-15537534)
chr8 (182-291)||(32604187-32604296)
chr8 (221-291)||(22125592-22125662)
chr8 (182-291)||(30309774-30309883)
chr8 (227-291)||(17670655-17670719)
chr8 (221-260)||(18860655-18860694)
chr8 (182-262)||(22043860-22043940)
[»] scaffold0718 (1 HSPs)
scaffold0718 (178-291)||(6192-6305)
[»] scaffold0273 (1 HSPs)
scaffold0273 (178-291)||(9425-9538)
[»] scaffold0064 (1 HSPs)
scaffold0064 (178-291)||(65720-65833)
[»] chr4 (11 HSPs)
chr4 (178-291)||(16241037-16241150)
chr4 (178-289)||(15143878-15143989)
chr4 (178-291)||(14964-15077)
chr4 (179-291)||(16349729-16349841)
chr4 (179-291)||(14163443-14163555)
chr4 (221-291)||(14299909-14299979)
chr4 (182-291)||(18223401-18223510)
chr4 (221-291)||(12480612-12480682)
chr4 (182-291)||(16247603-16247712)
chr4 (221-262)||(40477052-40477093)
chr4 (227-291)||(23959765-23959829)
[»] chr1 (11 HSPs)
chr1 (178-291)||(22459339-22459452)
chr1 (178-291)||(22469768-22469881)
chr1 (178-291)||(22832418-22832531)
chr1 (178-262)||(22435031-22435115)
chr1 (178-259)||(21753004-21753085)
chr1 (218-291)||(24784121-24784194)
chr1 (180-291)||(20247207-20247318)
chr1 (221-291)||(16346856-16346926)
chr1 (221-291)||(16353505-16353575)
chr1 (227-291)||(33387291-33387355)
chr1 (227-291)||(51329754-51329818)
[»] scaffold0198 (1 HSPs)
scaffold0198 (178-291)||(31288-31401)
[»] scaffold0120 (2 HSPs)
scaffold0120 (178-291)||(12264-12377)
scaffold0120 (178-291)||(15085-15198)
[»] chr5 (17 HSPs)
chr5 (178-291)||(21883681-21883794)
chr5 (178-291)||(25430324-25430437)
chr5 (180-291)||(20804503-20804614)
chr5 (211-291)||(22351853-22351933)
chr5 (182-291)||(23536584-23536693)
chr5 (221-291)||(29472445-29472515)
chr5 (211-291)||(18783051-18783131)
chr5 (221-291)||(22138612-22138682)
chr5 (221-291)||(22329259-22329329)
chr5 (221-291)||(27681772-27681842)
chr5 (221-262)||(14996140-14996181)
chr5 (227-291)||(41774793-41774857)
chr5 (182-240)||(23461812-23461870)
chr5 (221-291)||(27614300-27614370)
chr5 (221-263)||(37287896-37287938)
chr5 (242-291)||(21560397-21560446)
chr5 (178-291)||(26733863-26733976)
[»] chr3 (20 HSPs)
chr3 (178-291)||(11861943-11862056)
chr3 (178-291)||(23078436-23078549)
chr3 (178-291)||(17498282-17498395)
chr3 (178-283)||(14873020-14873124)
chr3 (178-291)||(15458852-15458965)
chr3 (183-291)||(14577847-14577955)
chr3 (221-291)||(12890340-12890410)
chr3 (183-289)||(16695760-16695866)
chr3 (182-291)||(23414216-23414325)
chr3 (221-291)||(3689574-3689644)
chr3 (178-240)||(12502488-12502550)
chr3 (179-240)||(15066660-15066721)
chr3 (227-291)||(10009237-10009301)
chr3 (227-291)||(15344674-15344738)
chr3 (211-291)||(24186774-24186854)
chr3 (221-291)||(6604366-6604436)
chr3 (221-291)||(15359681-15359751)
chr3 (221-291)||(15398948-15399018)
chr3 (221-291)||(16753130-16753200)
chr3 (221-291)||(20058483-20058553)
[»] scaffold0393 (1 HSPs)
scaffold0393 (179-291)||(433-545)
[»] scaffold0034 (1 HSPs)
scaffold0034 (178-291)||(121358-121471)
[»] scaffold0080 (3 HSPs)
scaffold0080 (179-291)||(32881-32993)
scaffold0080 (178-291)||(20912-21025)
scaffold0080 (178-260)||(55639-55721)
[»] scaffold0029 (2 HSPs)
scaffold0029 (178-289)||(9215-9326)
scaffold0029 (221-291)||(106967-107037)
[»] scaffold0022 (3 HSPs)
scaffold0022 (178-289)||(33964-34075)
scaffold0022 (178-262)||(42633-42717)
scaffold0022 (178-262)||(76353-76437)
[»] scaffold0261 (1 HSPs)
scaffold0261 (178-291)||(240-353)
[»] scaffold0023 (1 HSPs)
scaffold0023 (178-291)||(41201-41314)
[»] scaffold0280 (1 HSPs)
scaffold0280 (179-291)||(23416-23528)
[»] scaffold0017 (3 HSPs)
scaffold0017 (180-291)||(194058-194169)
scaffold0017 (182-291)||(20778-20887)
scaffold0017 (218-291)||(16256-16329)
[»] scaffold0621 (2 HSPs)
scaffold0621 (178-291)||(1018-1131)
scaffold0621 (178-291)||(5435-5548)
[»] scaffold0102 (1 HSPs)
scaffold0102 (182-291)||(49535-49644)
[»] scaffold0412 (1 HSPs)
scaffold0412 (180-291)||(14778-14889)
[»] scaffold0075 (1 HSPs)
scaffold0075 (178-291)||(54662-54775)
[»] scaffold0071 (1 HSPs)
scaffold0071 (178-291)||(3226-3339)
[»] scaffold1459 (1 HSPs)
scaffold1459 (179-291)||(282-394)
[»] scaffold1220 (1 HSPs)
scaffold1220 (179-291)||(738-850)
[»] scaffold0278 (1 HSPs)
scaffold0278 (178-291)||(4552-4665)
[»] scaffold0207 (1 HSPs)
scaffold0207 (178-291)||(3737-3850)
[»] chr7 (9 HSPs)
chr7 (178-291)||(14043656-14043769)
chr7 (178-291)||(14353686-14353799)
chr7 (180-291)||(15145119-15145230)
chr7 (221-291)||(13690042-13690112)
chr7 (211-291)||(11549301-11549381)
chr7 (221-291)||(11233412-11233482)
chr7 (221-291)||(15157256-15157326)
chr7 (178-270)||(11526574-11526666)
chr7 (211-291)||(14958499-14958579)
[»] scaffold0079 (1 HSPs)
scaffold0079 (179-291)||(37440-37552)
[»] scaffold0420 (1 HSPs)
scaffold0420 (178-288)||(7345-7455)
[»] scaffold0324 (1 HSPs)
scaffold0324 (178-291)||(2713-2826)
[»] scaffold0008 (3 HSPs)
scaffold0008 (178-291)||(15802-15915)
scaffold0008 (182-291)||(854-963)
scaffold0008 (218-291)||(138789-138862)
[»] scaffold0028 (3 HSPs)
scaffold0028 (219-291)||(12491-12563)
scaffold0028 (219-291)||(22019-22091)
scaffold0028 (211-291)||(56035-56115)
[»] scaffold0122 (1 HSPs)
scaffold0122 (178-291)||(39787-39900)
[»] scaffold0447 (1 HSPs)
scaffold0447 (178-291)||(1203-1316)
[»] scaffold0383 (1 HSPs)
scaffold0383 (178-291)||(4067-4180)
[»] scaffold0431 (1 HSPs)
scaffold0431 (219-291)||(11406-11478)
[»] scaffold0018 (1 HSPs)
scaffold0018 (178-266)||(8565-8653)
[»] scaffold0413 (1 HSPs)
scaffold0413 (184-291)||(4549-4656)
[»] scaffold0357 (1 HSPs)
scaffold0357 (180-291)||(17168-17278)
[»] scaffold0084 (1 HSPs)
scaffold0084 (178-289)||(9224-9335)
[»] scaffold0297 (1 HSPs)
scaffold0297 (178-240)||(11665-11727)
[»] scaffold0040 (2 HSPs)
scaffold0040 (221-291)||(104750-104820)
scaffold0040 (221-262)||(21177-21218)
[»] scaffold0010 (2 HSPs)
scaffold0010 (182-291)||(22193-22302)
scaffold0010 (182-291)||(15429-15538)
[»] scaffold0007 (1 HSPs)
scaffold0007 (211-291)||(49696-49776)
[»] scaffold0003 (2 HSPs)
scaffold0003 (211-291)||(425333-425413)
scaffold0003 (182-291)||(138691-138800)
[»] scaffold0109 (1 HSPs)
scaffold0109 (218-291)||(42193-42266)
[»] scaffold0009 (1 HSPs)
scaffold0009 (182-291)||(229042-229151)
[»] scaffold0556 (1 HSPs)
scaffold0556 (190-262)||(5758-5830)
[»] scaffold0044 (1 HSPs)
scaffold0044 (182-262)||(18165-18245)
[»] scaffold0001 (1 HSPs)
scaffold0001 (178-262)||(442653-442737)
[»] scaffold0395 (1 HSPs)
scaffold0395 (178-237)||(15767-15826)
[»] scaffold0289 (1 HSPs)
scaffold0289 (178-240)||(789-851)
[»] scaffold0180 (1 HSPs)
scaffold0180 (225-291)||(30250-30316)
[»] scaffold0819 (1 HSPs)
scaffold0819 (179-240)||(1105-1166)
[»] scaffold0451 (1 HSPs)
scaffold0451 (182-291)||(13220-13329)
[»] scaffold0282 (1 HSPs)
scaffold0282 (221-262)||(12817-12858)
[»] scaffold0243 (1 HSPs)
scaffold0243 (195-291)||(23386-23481)
[»] scaffold0046 (1 HSPs)
scaffold0046 (181-265)||(933-1017)


Alignment Details
Target: chr6 (Bit Score: 140; Significance: 2e-73; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 10 - 169
Target Start/End: Complemental strand, 18156044 - 18155885
Alignment:
Q  10 aagaatatcagcaagaatcattgagaaggccaagacagctcctctagtagagcatcaaagtgagccccctaagaaacagggcaaaaagtcagcagcttat 109  Q
    ||||| |||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18156044 aagaagatcaacaagaatcattgacaaggccaaggcagctcctctagtagagcatcaaagtgagccccctaagaaacagggcaaaaagtcagcaacttat 18155945  T
Q  110 ttaaaagcgcatcaaaacggaagattgatgacaaggagttgaagggtctgaagttgtcca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18155944 ttaaaagcgcatcaaaacggaagattgatgacaaggagttgaagggtctgaagttgtcca 18155885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 10 - 169
Target Start/End: Original strand, 18155311 - 18155470
Alignment:
Q  10 aagaatatcagcaagaatcattgagaaggccaagacagctcctctagtagagcatcaaagtgagccccctaagaaacagggcaaaaagtcagcagcttat 109  Q
    ||||| |||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  18155311 aagaagatcaacaagaatcattgagaaggccaaggcagctgctctagtagagcatcaaagtgagccccctaagaaacaacgcaaaaagtcatcagcttat 18155410  T
Q  110 ttaaaagcgcatcaaaacggaagattgatgacaaggagttgaagggtctgaagttgtcca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18155411 ttaaaagcgcatcaaaacggaagattgatgacaaggagttgaagggtctgaagttgtcca 18155470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 10 - 169
Target Start/End: Complemental strand, 23002252 - 23002095
Alignment:
Q  10 aagaatatcagcaagaatcattgagaaggccaagacagctcctctagtagagcatcaaagtgagccccctaagaaacagggcaaaaagtcagcagcttat 109  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| | |||    
T  23002252 aagaagatcagcaagaatcattgagaaggccaaggcagctcctctagtagagcatcaaagtgagccccctaagaaatggggcaaaaagtcagcaacgtat 23002153  T
Q  110 ttaaaagcgcatcaaaacggaagattgatgacaaggagttgaagggtctgaagttgtcca 169  Q
    ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23002152 ttaaaa--gcatcaaaacggaagattgatgacaaggagttgaagggtctgaagttgtcca 23002095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 10 - 169
Target Start/End: Original strand, 23786138 - 23786295
Alignment:
Q  10 aagaatatcagcaagaatcattgagaaggccaagacagctcctctagtagagcatcaaagtgagccccctaagaaacagggcaaaaagtcagcagcttat 109  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| | |||    
T  23786138 aagaagatcagcaagaatcattgagaaggccaaggcagctcctctagtagagcatcaaagtgagccccctaagaaatggggcaaaaagtcagcaacgtat 23786237  T
Q  110 ttaaaagcgcatcaaaacggaagattgatgacaaggagttgaagggtctgaagttgtcca 169  Q
    ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23786238 ttaaaa--gcatcaaaacggaagattgatgacaaggagttgaagggtctgaagttgtcca 23786295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 10 - 169
Target Start/End: Original strand, 23001523 - 23001678
Alignment:
Q  10 aagaatatcagcaagaatcattgagaaggccaagacagctcctctagtagagcatcaaagtgagccccctaagaaacagggcaaaaagtcagcagcttat 109  Q
    ||||| |||| |||||||||||||||||||||  ||   |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  23001523 aagaagatcaacaagaatcattgagaaggccacaact--tcctctagtagagcatcaaagtgagccccctaagaaacggggcaaaaagtcagcaggttat 23001620  T
Q  110 ttaaaagcgcatcaaaacggaagattgatgacaaggagttgaagggtctgaagttgtcca 169  Q
    ||||||  ||||||||||||||||||||||||| |||  |||||||||||||||||||||    
T  23001621 ttaaaa--gcatcaaaacggaagattgatgacatggacctgaagggtctgaagttgtcca 23001678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 10 - 169
Target Start/End: Complemental strand, 23786867 - 23786712
Alignment:
Q  10 aagaatatcagcaagaatcattgagaaggccaagacagctcctctagtagagcatcaaagtgagccccctaagaaacagggcaaaaagtcagcagcttat 109  Q
    ||||| |||| |||||||||||||||||||||  ||   |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  23786867 aagaagatcaacaagaatcattgagaaggccacaact--tcctctagtagagcatcaaagtgagccccctaagaaacggggcaaaaagtcagcaggttat 23786770  T
Q  110 ttaaaagcgcatcaaaacggaagattgatgacaaggagttgaagggtctgaagttgtcca 169  Q
    ||||||  ||||||||||||||||||||||||| |||  |||||||||||||||||||||    
T  23786769 ttaaaa--gcatcaaaacggaagattgatgacatggacctgaagggtctgaagttgtcca 23786712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 10 - 169
Target Start/End: Complemental strand, 21040034 - 21039876
Alignment:
Q  10 aagaatatcagcaagaatcattgagaaggccaagacagctcctctagtagagcatcaaagtgagccccctaagaaacagggcaaaaagtcagcagcttat 109  Q
    ||||| ||| ||||| ||||| |||||||||||| ||||||||||||| |||||| ||||||| ||||||||||||| |||||||||||||||| |  ||    
T  21040034 aagaagatcggcaaggatcatcgagaaggccaaggcagctcctctagtggagcatgaaagtgaaccccctaagaaacggggcaaaaagtcagcatcaaat 21039935  T
Q  110 ttaaaagcgcatcaaaacggaagattgatgac-aaggagttgaagggtctgaagttgtcca 169  Q
    ||||||  ||||||||| | |||||||||||| ||| || ||| |||||||||||||||||    
T  21039934 ttaaaa--gcatcaaaaggaaagattgatgacaaagcagctgaggggtctgaagttgtcca 21039876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 10 - 169
Target Start/End: Complemental strand, 21085085 - 21084927
Alignment:
Q  10 aagaatatcagcaagaatcattgagaaggccaagacagctcctctagtagagcatcaaagtgagccccctaagaaacagggcaaaaagtcagcagcttat 109  Q
    ||||| ||| ||||| ||||| |||||||||||| ||||||||||||| |||||| ||||||| ||||||||||||| |||||||||||||||| |  ||    
T  21085085 aagaagatcggcaaggatcatcgagaaggccaaggcagctcctctagtggagcatgaaagtgaaccccctaagaaacggggcaaaaagtcagcatcaaat 21084986  T
Q  110 ttaaaagcgcatcaaaacggaagattgatgac-aaggagttgaagggtctgaagttgtcca 169  Q
    ||||||  ||||||||| | |||||||||||| ||| || ||| |||||||||||||||||    
T  21084985 ttaaaa--gcatcaaaaggaaagattgatgacaaagcagctgaggggtctgaagttgtcca 21084927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 10 - 143
Target Start/End: Complemental strand, 21063125 - 21062994
Alignment:
Q  10 aagaatatcagcaagaatcattgagaaggccaagacagctcctctagtagagcatcaaagtgagccccctaagaaacagggcaaaaagtcagcagcttat 109  Q
    ||||| ||| ||||| ||||| |||||||||||| ||||||||||||| |||||| ||||||| ||||||||||||| |||||||||||||||| |  ||    
T  21063125 aagaagatcggcaaggatcatcgagaaggccaaggcagctcctctagtggagcatgaaagtgaaccccctaagaaacggggcaaaaagtcagcatcagat 21063026  T
Q  110 ttaaaagcgcatcaaaacggaagattgatgacaa 143  Q
    ||||||  ||||| ||| ||||||||||||||||    
T  21063025 ttaaaa--gcatctaaagggaagattgatgacaa 21062994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 19872024 - 19872137
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    ||||||||||||||||||||  ||||| |  |||||||||| |||| ||||||||||| ||||||||||||||||||| |||||| ||| |||||||| |    
T  19872024 agtaggaggatgattcctcaagaaggtctcaagcatcctcgactcaacattcgcaccaacatttgcattaggctgttgccccacagcttgagctacggtt 19872123  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  19872124 tgtagtgcagcagc 19872137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 18404381 - 18404268
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||||| |||||| | |||||||||||  |||||| | ||||||||||| ||||||||||| ||||| ||| ||| ||||||  ||    
T  18404381 agtaggaggatgattcctcataaaggtctctagcatcctcgcttcagcacttgcaccagcattcgcattaggctgatgtccaacagcttgagctacaact 18404282  T
Q  278 tgtagtgcagcagc 291  Q
    | ||||||||||||    
T  18404281 tctagtgcagcagc 18404268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 21765648 - 21765761
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    ||||||||||||||||||||  ||||| |  |||||||| | |||| ||||| |||||||||| |||||||| ||||| | || | ||| ||||||||||    
T  21765648 agtaggaggatgattcctcatgaaggtctcaagcatcctagactcaacattcacaccagcattcgcattaggttgttgcctcatagcttgagctacggct 21765747  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  21765748 tgtagtgcagcagc 21765761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 22437705 - 22437812
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||||| |||||| |  |||||||||| ||||||||||||||||      ||||||||||||||||  ||||||| ||||||||||    
T  22437705 agtaggaggatgattcctcataaaggtctcaagcatcctcgactcagcattcgcacca------gcattaggctgttgtcaaacaacttgagctacggct 22437798  T
Q  278 tgtagtgcagcagc 291  Q
    | || || ||||||    
T  22437799 tatattgtagcagc 22437812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 23082259 - 23082372
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    ||||||||||||||||||||||||||| |  | |||||||   |||| ||| |||||| |||||||||||||||| || |||||||||| ||| || |||    
T  23082259 agtaggaggatgattcctcagaaaggtctccaacatcctcacttcagaattagcaccaacatttgcattaggctgatgccccacaacttgagccacagct 23082358  T
Q  278 tgtagtgcagcagc 291  Q
    |  |||||||||||    
T  23082359 tccagtgcagcagc 23082372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 2871207 - 2871137
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||| ||||||||||||||||||||||| |||||||||||| |||  || ||  ||||||| ||||||||    
T  2871207 tcagcgttcgcaccagcatttgcattaggttgttgtcccacagcttgggcaacaacttgtagagcagcagc 2871137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 291
Target Start/End: Original strand, 25116436 - 25116506
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||   | || |||||||| ||||||||    
T  25116436 tcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttggacaacagcttgtagagcagcagc 25116506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 5835672 - 5835563
Alignment:
Q  182 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 281  Q
    ||||||||||||||||  || || |  | ||||||||||||||| ||| |||||||||| || ||||| |||||||||||| |||  || || |||||||    
T  5835672 ggaggatgattcctcatgaaagtctccaacatcctcgtctcagcgttcacaccagcattcgcgttaggttgttgtcccacagcttgggcaacagcttgta 5835573  T
Q  282 gtgcagcagc 291  Q
      ||||||||    
T  5835572 aagcagcagc 5835563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 291
Target Start/End: Complemental strand, 24292180 - 24292116
Alignment:
Q  227 ttcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  24292180 ttcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 24292116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 28259602 - 28259532
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||||||  | ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  28259602 tcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 28259532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 291
Target Start/End: Original strand, 28286314 - 28286384
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||||||  | ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  28286314 tcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 28286384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 291
Target Start/End: Original strand, 28313506 - 28313576
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||||||  | ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  28313506 tcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 28313576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 28338351 - 28338281
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||||||  | ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  28338351 tcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 28338281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 262
Target Start/End: Complemental strand, 25756051 - 25755971
Alignment:
Q  182 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccaca 262  Q
    ||||||||||||||||  ||||| | || ||| ||||||||||||||| ||||| ||||    ||||| ||||||||||||    
T  25756051 ggaggatgattcctcatgaaggtctctaacattctcgtctcagcattcacaccatcattcatgttaggttgttgtcccaca 25755971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 260
Target Start/End: Complemental strand, 25958196 - 25958116
Alignment:
Q  180 taggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtccca 260  Q
    |||| ||||||||||||| ||| ||||  | |||||||   ||||||||  |||||||| | |||||||||||||||||||    
T  25958196 taggcggatgattcctcataaaagtttccaacatcctcacttcagcattaacaccagcactagcattaggctgttgtccca 25958116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 291
Target Start/End: Original strand, 27206488 - 27206568
Alignment:
Q  211 catcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    |||||| | ||||||||| |||||||||||  | ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  27206488 catcctagcctcagcatttgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 27206568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 291
Target Start/End: Complemental strand, 27242740 - 27242660
Alignment:
Q  211 catcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    |||||| | ||||||||| |||||||||||  | ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  27242740 catcctagcctcagcatttgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 27242660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 178 - 292
Target Start/End: Original strand, 892 - 1006
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    ||||||||||||||||||||| ||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  892 agtaggaggatgattcctcaggaaggtctctagcatcctcatctcagcattcgcaccagcatttgcattaggctgttgtcccacagcttgagctacggct 991  T
Q  278 tgtagtgcagcagcc 292  Q
    |||||||||||||||    
T  992 tgtagtgcagcagcc 1006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 843 - 956
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    ||||||||||||||||||||||||||| |  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  843 agtaggaggatgattcctcagaaaggtctcaagcatcctcgactcagcattcgcaccagcatttgcattaggctgttgtcccacaacttgagctacggct 942  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||| ||||    
T  943 tgtagtgcaacagc 956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 9412 - 9525
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||| ||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  9412 agtaagaggatgattcctcagaaaagtctctagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacagcttaagctacgact 9511  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  9512 tgtagtgcagcagc 9525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 10183 - 10070
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||||||||| || | ||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||| ||||||||||    
T  10183 agtaggaggatgattcctcagaaaagtctctagcatcctcgtctcagcattcgtaccagcatttgcattaggttgttgtcccacagcttgagctacggct 10084  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  10083 tgtagtgcagcagc 10070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 9948 - 10061
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||| ||||||||||||||||||| || | |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||    
T  9948 agtatgaggatgattcctcagaaaagtctctagcatcctcgtctcagcattcgcacgagcatttgcattaggctgttgtcccacagcttgagctacggct 10047  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  10048 tgtagtgcagcagc 10061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 24029 - 23916
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||||| ||| || | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||    
T  24029 agtaggaggatgattcctcaaaaaagtctctagcatcctcgtctcagcattcgcaccagcatttgcattaggctattgtcccacaacttgagctacgact 23930  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  23929 tgtagtgcagcagc 23916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 30302 - 30189
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    ||||||||||||||||||||| ||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||| ||    
T  30302 agtaggaggatgattcctcaggaaggtctctagcatcctcgtctcagcattcacaccagcatttgcattaggctgttgtcccacagcttgagctacgtct 30203  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  30202 tgtagtgcagcagc 30189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 4e-41; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 23039460 - 23039347
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||  |||||| ||    
T  23039460 agtaggaggatgattcctcagaaaggtctatagcatcctcctctcagcattcgcaccatcatttgcattaggctgttgtcccacagcttgtgctacgact 23039361  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  23039360 tgtagtgcagcagc 23039347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 22741806 - 22741693
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    ||||||||||||||||||||| ||||| |  |||||||||| |||||||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||    
T  22741806 agtaggaggatgattcctcaggaaggtctcaagcatcctcgactcagcattcgcaccagcatttgcattaggttgttgccccacagcttgagctacggct 22741707  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  22741706 tgtagtgcagcagc 22741693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 23030364 - 23030477
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||||| |||||| |  |||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||| ||    
T  23030364 agtaggaggatgattcctcaaaaaggtatcaagcatcctcgactcagcattcgcaccagcatttgcattaggctgttgtccaacagcttgagctacgact 23030463  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  23030464 tgtagtgcagcagc 23030477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 24679090 - 24679203
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||| | |||||| |  ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||  |||||||||    
T  24679090 agtaggaggatgattcctaataaaggtctcaagcatcctcgtctcagcattcacaccagcatttgcattaggctgttgtcccacagcttgtgctacggct 24679189  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  24679190 tgtagtgcagcagc 24679203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 22732614 - 22732501
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    ||||||||||||||||||||||||||| | ||||||||||   ||||||||||||||||||||||||| ||| |||||||||||| ||||||||||| ||    
T  22732614 agtaggaggatgattcctcagaaaggtctctagcatcctcacttcagcattcgcaccagcatttgcatcaggttgttgtcccacagcttaagctacgact 22732515  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||| ||||    
T  22732514 tgtagtgcatcagc 22732501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 23028302 - 23028189
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    ||||| ||||||||||||||  ||||| |  ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||| |||    
T  23028302 agtagcaggatgattcctcatgaaggtctcaagcatcctcgtctcagcattcacaccagcatttgcattaggctgttgtcccacagcttgagctacagct 23028203  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  23028202 tgtagtgcagcagc 23028189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 20321584 - 20321703
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcacca------gcatttgcattaggctgttgtcccacaacttaagct 271  Q
    ||||||||||||||||||||| ||||| |  |||||||||| ||||||||||||||||      |||||||||||||| |||||||||||| ||||||||    
T  20321584 agtaggaggatgattcctcaggaaggtctcaagcatcctcgactcagcattcgcaccagcatttgcatttgcattaggttgttgtcccacagcttaagct 20321683  T
Q  272 acggcttgtagtgcagcagc 291  Q
    || |||||||||||||||||    
T  20321684 actgcttgtagtgcagcagc 20321703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 220 - 291
Target Start/End: Complemental strand, 23104530 - 23104459
Alignment:
Q  220 ctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  23104530 ctcagcattcgcaccagcatttgcatttggctgttgtcccacaacttgagctacggcttgtagtgcagcagc 23104459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 23065978 - 23066091
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||| |||||||||||||||||||||| | ||||||||||   ||| || | ||||||||||| |||||||| |||||||||||| ||| ||||||||||    
T  23065978 agtaagaggatgattcctcagaaaggtctctagcatcctcacttcaacacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacggct 23066077  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  23066078 tgtagtgcagcagc 23066091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 23075428 - 23075541
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||| |||||||||||||||||||||| | ||||||||||   ||| || | ||||||||||| |||||||| |||||||||||| ||| ||||||||||    
T  23075428 agtaagaggatgattcctcagaaaggtctctagcatcctcacttcaacacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacggct 23075527  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  23075528 tgtagtgcagcagc 23075541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 21319839 - 21319730
Alignment:
Q  182 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 281  Q
    ||||||||||||||||  || || | |||||||||||||||||||||| | ||| |||| | ||| ||||||||||||||| ||| |||||  ||||| |    
T  21319839 ggaggatgattcctcatgaaagtctctagcatcctcgtctcagcattcactccaacattcgtattcggctgttgtcccacagcttgagctatagcttgaa 21319740  T
Q  282 gtgcagcagc 291  Q
    ||||||||||    
T  21319739 gtgcagcagc 21319730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 211 - 262
Target Start/End: Complemental strand, 23115866 - 23115815
Alignment:
Q  211 catcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccaca 262  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  23115866 catcctcgtctcagcattcgcaccagcatctgcattaggttgttgtcccaca 23115815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 24816679 - 24816591
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaactt 266  Q
    |||||||||||||||||||||||| ||||  | ||||||    || ||||| ||||||||||| |||||||||||||| ||||||||||    
T  24816679 agtaggaggatgattcctcagaaaagtttccaacatcctaacttcggcattagcaccagcattagcattaggctgttgccccacaactt 24816591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 291
Target Start/End: Complemental strand, 24873560 - 24873481
Alignment:
Q  211 catcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    |||||| |||||||||||||||||||||||||| ||||| |||||||||||| |||  |  || |||||||||||||||||    
T  24873560 catcctagtctcagcattcgcaccagcatttgcgttaggttgttgtcccacagctt-gggaacagcttgtagtgcagcagc 24873481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 22462317 - 22462208
Alignment:
Q  182 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 281  Q
    ||||||||||| ||||  ||||| |  | |||||| |||||||||||| | ||||||||||| ||||| |||||||||||| |||  || || |||||||    
T  22462317 ggaggatgatttctcatgaaggtctccaacatcctagtctcagcattcactccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgta 22462218  T
Q  282 gtgcagcagc 291  Q
    | ||||||||    
T  22462217 gagcagcagc 22462208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 232
Target Start/End: Complemental strand, 24704322 - 24704268
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgca 232  Q
    ||||||||||||||||||||  || || | |||||||||||||||||||||||||    
T  24704322 agtaggaggatgattcctcatgaaagtctctagcatcctcgtctcagcattcgca 24704268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 291
Target Start/End: Complemental strand, 22322136 - 22322072
Alignment:
Q  227 ttcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  22322136 ttcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 22322072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 291
Target Start/End: Original strand, 16932150 - 16932220
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||||||  | ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  16932150 tcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 16932220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 41605883 - 41605813
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    |||||||||||||| |||||||| ||||| |||||||||||| |||  || ||  ||||||| ||||||||    
T  41605883 tcagcattcgcacccgcatttgcgttaggttgttgtcccacagcttgggcaacaacttgtagagcagcagc 41605813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 291
Target Start/End: Complemental strand, 24656465 - 24656385
Alignment:
Q  211 catcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    |||||| |||||||||||| || ||| ||| || ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  24656465 catcctagtctcagcattcacaacagtattcgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 24656385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 24713683 - 24713747
Alignment:
Q  227 ttcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||| ||||| |||||||| ||| |||  || || |||||||| ||||||||    
T  24713683 ttcgcaccagcatttgcgttaggttgttgtccgacagcttgggcaacagcttgtagagcagcagc 24713747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 82; Significance: 9e-39; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 935 - 822
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||||||||| || | |||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||| ||||||||||    
T  935 agtaggaggatgattcctcagaaaagtctctagcatcctcatctcaacattcgcatcagcatttgcattaggctgttgtcccacagcttgagctacggct 836  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  835 tgtagtgcagcagc 822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 82; Significance: 9e-39; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 15912 - 16025
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||| ||||||||||||||||||| || | |||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||| ||||||||||    
T  15912 agtaagaggatgattcctcagaaaagtctctagcatcctcgtctcagcattcgcaccaacatttgcattaggctgttatcccacagcttgagctacggct 16011  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  16012 tgtagtgcagcagc 16025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 82; Significance: 9e-39; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 16652 - 16539
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||||||||| || | ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||| ||||||| ||    
T  16652 agtaggaggatgattcctcagaaaagtctctagcatcctcgtctcagtattcgcagcagcatttgcattaggctgttgtcccacagcttgagctacgact 16553  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  16552 tgtagtgcagcagc 16539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 82; Significance: 9e-39; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 22606 - 22719
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||||| |||||| |  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||| |||    
T  22606 agtaggaggatgattcctcataaaggtctcaagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgccccacagcttgagctacagct 22705  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  22706 tgtagtgcagcagc 22719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 38030 - 38143
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||||| |||||| |  |||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||| |||||| |||    
T  38030 agtaggaggatgattcctcataaaggtctcaagcatcctcgtctccgcattcgcaccagcatttgcattaggctgttgccccacagcttgagctacagct 38129  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  38130 tgtagtgcagcagc 38143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 82; Significance: 9e-39; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 36123 - 36010
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||||| | |||| |  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||    
T  36123 agtaggaggatgattcctcatacaggtctcaagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgccccacagcttgagctacggct 36024  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  36023 tgtagtgcagcagc 36010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 178 - 273
Target Start/End: Original strand, 20097 - 20192
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctac 273  Q
    ||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20097 agtaggaggatgattcctcaggaaggtctctagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttgagctac 20192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 1e-37; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 178 - 289
Target Start/End: Original strand, 19982005 - 19982116
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||| ||| |||||| ||| ||||||||||    
T  19982005 agtaggaggatgattcctcagaaaggtttccagcatcctcgactcagcattcgcaccagcatttgcattaggctattgccccacagcttgagctacggct 19982104  T
Q  278 tgtagtgcagca 289  Q
     |||||||||||    
T  19982105 ggtagtgcagca 19982116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 18880400 - 18880287
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||| |||||||||||||||||||||| | |||||||||||  |||||| | ||||||||||||||||||||||||||||||||||||| |||||| |||    
T  18880400 agtatgaggatgattcctcagaaaggtctctagcatcctcgcttcagcacttgcaccagcatttgcattaggctgttgtcccacaacttgagctacagct 18880301  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  18880300 tgtagtgcagcagc 18880287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 21163273 - 21163160
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||| ||||||||||| |||||| |  ||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||| ||||||||||    
T  21163273 agtaggagaatgattcctcataaaggtctcaagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgccccatagcttgagctacggct 21163174  T
Q  278 tgtagtgcagcagc 291  Q
    || |||||||||||    
T  21163173 tgcagtgcagcagc 21163160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 21390635 - 21390522
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||| |||| ||||||||||| ||||| |  |||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  21390635 agtaagagggtgattcctcaggaaggtctcaagcatcctcgactcagcattcgcaccatcatttgcattaggctgttgtcccacagcttgagctacggct 21390536  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  21390535 tgtagtgcagcagc 21390522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 21779961 - 21779848
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||| |||| ||||||||||| ||||| |  |||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  21779961 agtaagagggtgattcctcaggaaggtctcaagcatcctcgactcagcattcgcaccatcatttgcattaggctgttgtcccacagcttgagctacggct 21779862  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  21779861 tgtagtgcagcagc 21779848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 181 - 291
Target Start/End: Original strand, 6518411 - 6518521
Alignment:
Q  181 aggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgt 280  Q
    ||||||||||||||||||||| || | |||||||||||  |||||||| ||||||||||| ||||||||||| ||||||||| ||| ||| |||||||||    
T  6518411 aggaggatgattcctcagaaaagtctctagcatcctcgcttcagcatttgcaccagcattcgcattaggctgctgtcccacagcttgagccacggcttgt 6518510  T
Q  281 agtgcagcagc 291  Q
    |||||||||||    
T  6518511 agtgcagcagc 6518521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 180 - 291
Target Start/End: Original strand, 21672555 - 21672666
Alignment:
Q  180 taggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttg 279  Q
    |||||||||||||||||| ||| || | ||||||||||   ||| |||||||||||||||||||||||||||||||||||||| ||| ||| ||  ||||    
T  21672555 taggaggatgattcctcataaaagtctctagcatcctcacttcatcattcgcaccagcatttgcattaggctgttgtcccacagcttgagccacaacttg 21672654  T
Q  280 tagtgcagcagc 291  Q
    ||||||||||||    
T  21672655 tagtgcagcagc 21672666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 17354641 - 17354579
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatt 240  Q
    |||||||||||||||||||| |||||| |  |||||||||| |||||||||||||||||||||    
T  17354641 agtaggaggatgattcctcataaaggtcttaagcatcctcgactcagcattcgcaccagcatt 17354579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 22420636 - 22420523
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||||||||| || |  | |||||||  ||||||||| ||||||||||| ||||||||||| || |||||| ||| ||| ||  ||    
T  22420636 agtaggaggatgattcctcagaaaagtctccaacatcctcacctcagcattagcaccagcattagcattaggctgatgccccacagcttgagccacaact 22420537  T
Q  278 tgtagtgcagcagc 291  Q
    | ||||||| ||||    
T  22420536 tctagtgcaacagc 22420523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 291
Target Start/End: Complemental strand, 17829680 - 17829600
Alignment:
Q  211 catcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    |||||| ||||||||| || ||||||||||||||||||| |||||||||||| |||  || || |||||||| ||||||||    
T  17829680 catcctagtctcagcagtcacaccagcatttgcattaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 17829600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 22116878 - 22116808
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  22116878 tcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 22116808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 15537425 - 15537534
Alignment:
Q  182 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 281  Q
    ||||||||||| ||||  ||||| |  | |||||| |||||||||||| | ||| ||||||||||||| |||||||||||| |||  || || |||||||    
T  15537425 ggaggatgatttctcatgaaggtctccaacatcctagtctcagcattcactccaacatttgcattaggttgttgtcccacagcttgggcaacagcttgta 15537524  T
Q  282 gtgcagcagc 291  Q
    | ||||||||    
T  15537525 gagcagcagc 15537534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 32604187 - 32604296
Alignment:
Q  182 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 281  Q
    ||||||||||| ||||  ||||| |  | |||||| ||||||||| || ||||| ||||||||||||| |||||||||||| |||  || || |||||||    
T  32604187 ggaggatgatttctcatgaaggtctccaacatcctagtctcagcagtcacaccaacatttgcattaggttgttgtcccacagcttgggcaacagcttgta 32604286  T
Q  282 gtgcagcagc 291  Q
    | ||||||||    
T  32604287 gagcagcagc 32604296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 22125662 - 22125592
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||  || ||  ||||||| ||||||||    
T  22125662 tcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacaacttgtagagcagcagc 22125592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 30309883 - 30309774
Alignment:
Q  182 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 281  Q
    ||||||||||| ||||  ||||| |  | |||||| |||||||||||| |||||||||| || ||||| |||||||||||| |||  || ||  ||||||    
T  30309883 ggaggatgatttctcatgaaggtctccaacatcctggtctcagcattcacaccagcattcgcgttaggttgttgtcccacagcttgggcaacaacttgta 30309784  T
Q  282 gtgcagcagc 291  Q
    | ||||||||    
T  30309783 gagcagcagc 30309774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 291
Target Start/End: Complemental strand, 17670719 - 17670655
Alignment:
Q  227 ttcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  17670719 ttcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 17670655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 260
Target Start/End: Original strand, 18860655 - 18860694
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtccca 260  Q
    ||||||||||||||||||||||| ||||| ||||||||||    
T  18860655 tcagcattcgcaccagcatttgcgttaggttgttgtccca 18860694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 22043860 - 22043940
Alignment:
Q  182 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccaca 262  Q
    ||||||||||||||||  ||||| | || ||| || |||||| | ||| ||||| ||||||| ||||| ||||||||||||    
T  22043860 ggaggatgattcctcatgaaggtctctaacattctagtctcaacgttcacaccaacatttgcgttaggttgttgtcccaca 22043940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 6305 - 6192
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    ||||||||||||||||||||| ||||| |  |||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||| |||||| |||    
T  6305 agtaggaggatgattcctcaggaaggtctcaagcatcctcgactcagcattcgcaccagcatttgcattaggttgttgtcccacagcttgagctacagct 6206  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  6205 tgtagtgcagcagc 6192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 9425 - 9538
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    ||||||||||||||||||||| |||||||  |||||||||| |||||||||| ||||||||||||||||||||||||| |||||| ||| ||||||||||    
T  9425 agtaggaggatgattcctcaggaaggtttccagcatcctcgactcagcattcccaccagcatttgcattaggctgttgccccacagcttgagctacggct 9524  T
Q  278 tgtagtgcagcagc 291  Q
    |||| |||||||||    
T  9525 tgtaatgcagcagc 9538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 65833 - 65720
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||| ||||||||||||||| |||||| |  ||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||| ||||||||||    
T  65833 agtaagaggatgattcctcataaaggtctcaagcatcctcgtctcagcattcacaccagcatttgcattaggctgttgccccacagcttgagctacggct 65734  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  65733 tgtagtgcagcagc 65720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 16241150 - 16241037
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    ||||||||||||||||||||||||||| | |||||||||||  |||||| | |||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  16241150 agtaggaggatgattcctcagaaaggtctctagcatcctcgcttcagcacttgcaccagcatttgcatcaggctgttgtcccacagcttgagctacggct 16241051  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  16241050 tgtagtgcagcagc 16241037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 178 - 289
Target Start/End: Complemental strand, 15143989 - 15143878
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    ||||||||||||||||||||| ||||| |  |||||||||| |||||||||| ||||||||||||||||||||||||| |||||| ||| | |||| |||    
T  15143989 agtaggaggatgattcctcaggaaggtctcaagcatcctcgactcagcattcacaccagcatttgcattaggctgttgccccacagcttgatctacagct 15143890  T
Q  278 tgtagtgcagca 289  Q
    ||||||||||||    
T  15143889 tgtagtgcagca 15143878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 15077 - 14964
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||||||||| |||| ||||||||||   |||||||| |||||||||||||||  |||||| ||||||||||||| ||||||  ||    
T  15077 agtaggaggatgattcctcagaaaagtttctagcatcctcacttcagcattagcaccagcatttgcagcaggctgatgtcccacaacttgagctacaact 14978  T
Q  278 tgtagtgcagcagc 291  Q
    | ||||||| ||||    
T  14977 tctagtgcaacagc 14964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 291
Target Start/End: Complemental strand, 16349841 - 16349729
Alignment:
Q  179 gtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggctt 278  Q
    |||||||||||||||||||  || || |  ||||||||||||||||||||| ||||| |||| |||||||| | ||| |||||| ||| |||||||||||    
T  16349841 gtaggaggatgattcctcatgaaagtctcgagcatcctcgtctcagcattcacaccaacattcgcattaggttattgccccacagcttgagctacggctt 16349742  T
Q  279 gtagtgcagcagc 291  Q
    ||||| |||||||    
T  16349741 gtagttcagcagc 16349729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 291
Target Start/End: Original strand, 14163443 - 14163555
Alignment:
Q  179 gtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggctt 278  Q
    ||||||||||||||||||||||| ||||  |||||||||   |||||||| |||||  |||| |||||||| ||||| |||||| ||| ||| || ||||    
T  14163443 gtaggaggatgattcctcagaaaagtttccagcatcctcacttcagcattagcacccacattcgcattaggttgttgccccacagcttgagcaacagctt 14163542  T
Q  279 gtagtgcagcagc 291  Q
    | |||||||||||    
T  14163543 gcagtgcagcagc 14163555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 14299979 - 14299909
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  14299979 tcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 14299909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 18223510 - 18223401
Alignment:
Q  182 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 281  Q
    ||||||||||| ||||  ||||| |  | |||||| |||||||||||  ||||||||||||| ||||| |||||||||||| |||  || || |||||||    
T  18223510 ggaggatgatttctcatgaaggtctccaacatcctggtctcagcatttacaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgta 18223411  T
Q  282 gtgcagcagc 291  Q
    | ||||||||    
T  18223410 gagcagcagc 18223401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 291
Target Start/End: Original strand, 12480612 - 12480682
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    |||||||| |||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  12480612 tcagcatttgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 12480682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 16247712 - 16247603
Alignment:
Q  182 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 281  Q
    ||||||||||| ||||  ||||| |  | |||||| ||| |||||||  ||||||||||||| ||||| |||||||||||| |||  || || |||||||    
T  16247712 ggaggatgatttctcatgaaggtctccaacatcctagtcccagcatttacaccagcatttgcgttagggtgttgtcccacagcttgggcaacagcttgta 16247613  T
Q  282 gtgcagcagc 291  Q
    | ||||||||    
T  16247612 gagcagcagc 16247603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 262
Target Start/End: Original strand, 40477052 - 40477093
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccaca 262  Q
    ||||||||||||||||||||||| ||||| ||||||||||||    
T  40477052 tcagcattcgcaccagcatttgcgttaggttgttgtcccaca 40477093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 23959765 - 23959829
Alignment:
Q  227 ttcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  23959765 ttcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 23959829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 22459452 - 22459339
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    ||||||||||||||||||||  ||||| |  |||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||    
T  22459452 agtaggaggatgattcctcaagaaggtctcaagcatcctcgactcagcattcgcaccagcatttgcattaggctgttgccccacagcttgagctacggct 22459353  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  22459352 tgtagtgcagcagc 22459339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 22469881 - 22469768
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    ||||||||||||||||||||  ||||| |  |||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||    
T  22469881 agtaggaggatgattcctcaagaaggtctcaagcatcctcgactcagcattcgcaccagcatttgcattaggctgttgccccacagcttgagctacggct 22469782  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  22469781 tgtagtgcagcagc 22469768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 22832531 - 22832418
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||||| ||| || |  ||||||||||||||||||||| ||||||||||||||||||| ||||| |||||| ||| ||||||||||    
T  22832531 agtaggaggatgattcctcataaaagtctcaagcatcctcgtctcagcattcacaccagcatttgcattaggttgttgccccacagcttgagctacggct 22832432  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  22832431 tgtagtgcagcagc 22832418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 22435115 - 22435031
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccaca 262  Q
    |||||||||||||||||| | ||| || |   |||||||||||||||||||| |||||||||||||||| |||||||| ||||||    
T  22435115 agtaggaggatgattcctaataaaagtctcgcgcatcctcgtctcagcattcacaccagcatttgcattgggctgttgccccaca 22435031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 21753004 - 21753085
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtccc 259  Q
    |||||||||||||||||||||||| || | |||||||||||  ||| || | || |||||||| ||||||||||||||||||    
T  21753004 agtaggaggatgattcctcagaaaagtctctagcatcctcgcttcaacacttgctccagcattcgcattaggctgttgtccc 21753085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 291
Target Start/End: Complemental strand, 24784194 - 24784121
Alignment:
Q  218 gtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||| |||| ||||||||||||| ||||| |||||||||||| |||| || || |||||||| ||||||||    
T  24784194 gtctcagtattcacaccagcatttgcgttaggttgttgtcccacagcttaggcaacagcttgtagagcagcagc 24784121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 291
Target Start/End: Original strand, 20247207 - 20247318
Alignment:
Q  180 taggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttg 279  Q
    |||||||||||||||||| |||  | |  | ||||||||  |||||| | || |||||||| ||||||||||||||||||||| ||| ||| ||  | ||    
T  20247207 taggaggatgattcctcacaaaactctccaacatcctcgcttcagcacttgctccagcattcgcattaggctgttgtcccacagcttgagccacaacatg 20247306  T
Q  280 tagtgcagcagc 291  Q
    ||||||||||||    
T  20247307 tagtgcagcagc 20247318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 16346926 - 16346856
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    |||||||| |||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  16346926 tcagcatttgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 16346856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 16353575 - 16353505
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    |||||||| |||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  16353575 tcagcatttgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 16353505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 291
Target Start/End: Complemental strand, 33387355 - 33387291
Alignment:
Q  227 ttcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  33387355 ttcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 33387291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 291
Target Start/End: Complemental strand, 51329818 - 51329754
Alignment:
Q  227 ttcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||| ||||| |||||||||||| |||  || || |||||||  ||||||||    
T  51329818 ttcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtatagcagcagc 51329754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 31288 - 31401
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    ||||||||||||||||||||  |||||||  |||||| ||| || ||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||    
T  31288 agtaggaggatgattcctcaagaaggtttccagcatcttcgacttagcattcgcactagcatttgcattaggctgttgtcccacagcttgagctacggct 31387  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  31388 tgtagtgcagcagc 31401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 74; Significance: 6e-34; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 12264 - 12377
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    ||||||||||||||||||||||||||| | |||||||||||  |||||| | ||||||||||| |||||||||| |||||||||| ||| ||||||||||    
T  12264 agtaggaggatgattcctcagaaaggtctctagcatcctcgcttcagcacttgcaccagcattcgcattaggctattgtcccacagcttgagctacggct 12363  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  12364 tgtagtgcagcagc 12377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 15085 - 15198
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||| |||||||||||||| | |||||||||||  |||||| | ||||||| ||| |||||||| |||||||||||| ||| | ||||||||    
T  15085 agtaggaggatggttcctcagaaaggtctctagcatcctcgcttcagcacttgcaccagaattcgcattaggttgttgtcccacagcttgacctacggct 15184  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  15185 tgtagtgcagcagc 15198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 6e-34; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 21883681 - 21883794
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    ||||||||||||||||||||  |||||||  |||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||  ||||||||     
T  21883681 agtaggaggatgattcctcatgaaggtttccagcatcctcgactcagcattcgcaccagcatttgcattaggctgttgccccacagcttgtgctacggcc 21883780  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  21883781 tgtagtgcagcagc 21883794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 25430324 - 25430437
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||||||||||||   |||||||||||  |||||| | ||||||||||| |||||||| |||||||||||| ||| |||||| |||    
T  25430324 agtaggaggatgattcctcagaaaggtccctagcatcctcgcttcagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagct 25430423  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  25430424 tgtagtgcagcagc 25430437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 180 - 291
Target Start/End: Original strand, 20804503 - 20804614
Alignment:
Q  180 taggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttg 279  Q
    ||||||||||||||||||  ||||| |   |||||||||||||||||||| | |||||||| ||||||||||||||||||| |  || |||||| |||||    
T  20804503 taggaggatgattcctcatgaaggtctcgtgcatcctcgtctcagcattcactccagcattcgcattaggctgttgtcccataggttgagctacagcttg 20804602  T
Q  280 tagtgcagcagc 291  Q
    || |||||||||    
T  20804603 tactgcagcagc 20804614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 211 - 291
Target Start/End: Original strand, 22351853 - 22351933
Alignment:
Q  211 catcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    |||||| |||||||||||||||||||||||||| ||||| |||||||||||| |||  || || |||||||||||||||||    
T  22351853 catcctagtctcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagtgcagcagc 22351933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 23536693 - 23536584
Alignment:
Q  182 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 281  Q
    ||||||||||||||||  ||||| |  | |||||| |||||||||||| |||||||||| || ||||| |||||||||||| |||  || || |||||||    
T  23536693 ggaggatgattcctcatgaaggtctccaacatcctggtctcagcattcacaccagcattcgcgttaggttgttgtcccacagcttgggcaacagcttgta 23536594  T
Q  282 gtgcagcagc 291  Q
    | ||||||||    
T  23536593 gagcagcagc 23536584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 29472515 - 29472445
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||| || || |||||||  ||||||||    
T  29472515 tcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttaggcaacagcttgtaaagcagcagc 29472445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 211 - 291
Target Start/End: Original strand, 18783051 - 18783131
Alignment:
Q  211 catcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    |||||| |||||||| ||| ||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  18783051 catcctagtctcagcgttcacaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 18783131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 291
Target Start/End: Original strand, 22138612 - 22138682
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||  || ||  ||||||| ||||||||    
T  22138612 tcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacaacttgtagagcagcagc 22138682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 22329329 - 22329259
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||||||||  ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  22329329 tcagcattcgcaccagcatttgtgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 22329259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 27681842 - 27681772
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||  || ||  ||||||| ||||||||    
T  27681842 tcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacaacttgtagagcagcagc 27681772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 262
Target Start/End: Complemental strand, 14996181 - 14996140
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccaca 262  Q
    ||||||||||||||||||||||| ||||| ||||||||||||    
T  14996181 tcagcattcgcaccagcatttgcgttaggttgttgtcccaca 14996140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 41774793 - 41774857
Alignment:
Q  227 ttcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  41774793 ttcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 41774857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 23461812 - 23461870
Alignment:
Q  182 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatt 240  Q
    ||||||||||||||||  ||||| |  ||||||||||||||||||||| | ||||||||    
T  23461812 ggaggatgattcctcatgaaggtctcaagcatcctcgtctcagcattcactccagcatt 23461870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 291
Target Start/End: Original strand, 27614300 - 27614370
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||||||  | ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  27614300 tcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 27614370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 263
Target Start/End: Complemental strand, 37287938 - 37287896
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaa 263  Q
    ||||| ||||||||||||||||| ||||| |||||||||||||    
T  37287938 tcagcgttcgcaccagcatttgcgttaggttgttgtcccacaa 37287896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 291
Target Start/End: Complemental strand, 21560446 - 21560397
Alignment:
Q  242 gcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||| ||||||||||||||||||| |||||| ||||  |||||||||||    
T  21560446 gcattcggctgttgtcccacaacttgagctacagcttcaagtgcagcagc 21560397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 26733976 - 26733863
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    ||||||||| |||||||||| ||| || |  | |||||||   |||||||| ||||||||||| ||||||||||| ||||| ||| ||| ||| |   ||    
T  26733976 agtaggaggttgattcctcataaaagtctccaacatcctcacttcagcatttgcaccagcattagcattaggctgatgtcctacagcttgagccaaaact 26733877  T
Q  278 tgtagtgcagcagc 291  Q
    | ||||||||||||    
T  26733876 tctagtgcagcagc 26733863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 6e-34; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 11861943 - 11862056
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    ||||||||||||||||||||  ||||| |  ||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||  |||||||||    
T  11861943 agtaggaggatgattcctcatgaaggtctcaagcatcctcgtctcagcattcactccagcatttgcattaggctgttgtcccacagcttgggctacggct 11862042  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  11862043 tgtagtgcagcagc 11862056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 23078549 - 23078436
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||||| ||| || |  ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||  |||||||||    
T  23078549 agtaggaggatgattcctcataaaagtctcaagcatcctcgtctcagcattcacaccagcatttgcattaggctgttgtcccacgacttgtgctacggct 23078450  T
Q  278 tgtagtgcagcagc 291  Q
    | ||||||||||||    
T  23078449 tatagtgcagcagc 23078436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 17498282 - 17498395
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||| |||||||||||| | ||||||||||   ||| || |  |||||||||| |||||||||||| |||||||||||| ||||||||||    
T  17498282 agtaggaggatgatccctcagaaaggtctctagcatcctcccttcaacacttccaccagcattcgcattaggctgtcgtcccacaacttgagctacggct 17498381  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  17498382 tgtagtgcagcagc 17498395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 178 - 283
Target Start/End: Complemental strand, 14873124 - 14873020
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||||  ||||  | | ||||||||||||||||||||| ||||||||||||||||||| ||||| |||||| ||| ||||||||||    
T  14873124 agtaggaggatgattcctcgtaaagtctca-agcatcctcgtctcagcattcacaccagcatttgcattaggttgttgccccacagcttgagctacggct 14873026  T
Q  278 tgtagt 283  Q
    ||||||    
T  14873025 tgtagt 14873020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 15458965 - 15458852
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    ||||||||||||||||||| ||||||| | |||||||||||  |||||| | ||||||||||| ||||||||||| ||||| ||| ||| |||||| |||    
T  15458965 agtaggaggatgattcctccgaaaggtctctagcatcctcgcttcagcacttgcaccagcattcgcattaggctgatgtccaacagcttgagctacagct 15458866  T
Q  278 tgtagtgcagcagc 291  Q
    | ||||||||||||    
T  15458865 tctagtgcagcagc 15458852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 291
Target Start/End: Complemental strand, 14577955 - 14577847
Alignment:
Q  183 gaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtag 282  Q
    ||||||||||||||| ||| || | ||||||||||   |||||||| ||||| ||||| ||||||||||||||||||||| ||| ||| || ||||  ||    
T  14577955 gaggatgattcctcaaaaaagtctctagcatcctcacatcagcatttgcacccgcattagcattaggctgttgtcccacagcttgagcaacagcttccag 14577856  T
Q  283 tgcagcagc 291  Q
    |||||||||    
T  14577855 tgcagcagc 14577847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 291
Target Start/End: Original strand, 12890340 - 12890410
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||  || || |||||||||||||||||    
T  12890340 tcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagtgcagcagc 12890410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 289
Target Start/End: Original strand, 16695760 - 16695866
Alignment:
Q  183 gaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtag 282  Q
    |||||||||||||||  ||||| |  | |||||| |||||||||||| ||||||||||||| ||||| |||||||||||| |||  || || ||||||||    
T  16695760 gaggatgattcctcatgaaggtctccaacatcctggtctcagcattcacaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtag 16695859  T
Q  283 tgcagca 289  Q
     ||||||    
T  16695860 agcagca 16695866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 23414325 - 23414216
Alignment:
Q  182 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 281  Q
    ||||||||||||||||  ||||| |  | |||||| |||||||||||| ||||||||||||| ||||| |||||||||||| | |  || || |||||||    
T  23414325 ggaggatgattcctcatgaaggtctccaacatcctggtctcagcattcacaccagcatttgcgttaggttgttgtcccacagcatgggcaacagcttgta 23414226  T
Q  282 gtgcagcagc 291  Q
    | ||||||||    
T  23414225 gagcagcagc 23414216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 291
Target Start/End: Original strand, 3689574 - 3689644
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    |||||||| |||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  3689574 tcagcatttgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 3689644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 12502488 - 12502550
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatt 240  Q
    ||||||||||||||||||||  || || |  ||||||||||||||||||||| ||||||||||    
T  12502488 agtaggaggatgattcctcatgaaagtctcaagcatcctcgtctcagcattcacaccagcatt 12502550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 15066660 - 15066721
Alignment:
Q  179 gtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatt 240  Q
    |||||||||||||||||||  || || |  ||||||||||||||||||||| ||||||||||    
T  15066660 gtaggaggatgattcctcatgaaagtctcaagcatcctcgtctcagcattcacaccagcatt 15066721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 10009237 - 10009301
Alignment:
Q  227 ttcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  10009237 ttcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 10009301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 291
Target Start/End: Complemental strand, 15344738 - 15344674
Alignment:
Q  227 ttcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  15344738 ttcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 15344674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 291
Target Start/End: Original strand, 24186774 - 24186854
Alignment:
Q  211 catcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||||  |||||||||| || ||||| |||||| ||||| |||  || || |||||||| ||||||||    
T  24186774 catcctcgtctcagcattaacaccagcattcgcgttaggttgttgttccacagcttgggcaacagcttgtagagcagcagc 24186854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 291
Target Start/End: Original strand, 6604366 - 6604436
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    |||||||| |||||||||||  | ||||| ||||||||||||||||  || || |||||||| ||||||||    
T  6604366 tcagcatttgcaccagcattcacgttaggttgttgtcccacaacttgggcaacagcttgtagagcagcagc 6604436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 291
Target Start/End: Original strand, 15359681 - 15359751
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||||||  | ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  15359681 tcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 15359751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 15399018 - 15398948
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||||||  | ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  15399018 tcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 15398948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 16753200 - 16753130
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||||||  | ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  16753200 tcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 16753130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 20058553 - 20058483
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||||||  | ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  20058553 tcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 20058483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 179 - 291
Target Start/End: Original strand, 433 - 545
Alignment:
Q  179 gtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggctt 278  Q
    |||||||||||||||||||  ||||| |  ||||||||||||||||||||| |||||||||| |||||||||||||| |||||| ||| |||||||||||    
T  433 gtaggaggatgattcctcatgaaggtctcaagcatcctcgtctcagcattcacaccagcattcgcattaggctgttgccccacagcttgagctacggctt 532  T
Q  279 gtagtgcagcagc 291  Q
    |||||||||||||    
T  533 gtagtgcagcagc 545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 121471 - 121358
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    ||||||||||||||||||||  || || |  ||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||| |||||| |||    
T  121471 agtaggaggatgattcctcatgaaagtctcaagcatcctcgtctcagcattcacaccagcattcgcattaggctgttgtcccacagcttgagctacagct 121372  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  121371 tgtagtgcagcagc 121358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 69; Significance: 5e-31; HSPs: 3)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 179 - 291
Target Start/End: Original strand, 32881 - 32993
Alignment:
Q  179 gtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggctt 278  Q
    ||||||||||||||||| | ||| || |  ||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||| |||||||||||    
T  32881 gtaggaggatgattccttaaaaaagtctcaagcatcctcgtctcagcattcacaccagcatttgcattaggctgttgccccacagcttgagctacggctt 32980  T
Q  279 gtagtgcagcagc 291  Q
    || ||||||||||    
T  32981 gtcgtgcagcagc 32993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 21025 - 20912
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||| ||||| || | ||||||||||   |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||  ||    
T  21025 agtaggaggatgattcctaagaaaagtctctagcatcctcacttcagcatttgcaccagcatttgcattaggctgatgtcccacaacttgagctacaact 20926  T
Q  278 tgtagtgcagcagc 291  Q
    | ||||||| ||||    
T  20925 tttagtgcaacagc 20912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 260
Target Start/End: Original strand, 55639 - 55721
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtccca 260  Q
    |||||||||||||||||| || |||||||  |||||||||| |  ||||||||||||||||||||||||||| ||||||||||    
T  55639 agtaggaggatgattccttaggaaggtttcaagcatcctcgacaaagcattcgcaccagcatttgcattaggttgttgtccca 55721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 178 - 289
Target Start/End: Original strand, 9215 - 9326
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    ||||||||||||| |||||| |||||| | |||||||||| |||||||| || ||||||||||||||||||||  |||||||||| ||| ||||||||||    
T  9215 agtaggaggatgagtcctcataaaggtctctagcatcctcatctcagcagtcacaccagcatttgcattaggccattgtcccacagcttgagctacggct 9314  T
Q  278 tgtagtgcagca 289  Q
    ||||||||||||    
T  9315 tgtagtgcagca 9326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 107037 - 106967
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  107037 tcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 106967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 178 - 289
Target Start/End: Complemental strand, 34075 - 33964
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    ||||||||||||||||||||| ||||| |  |||||||||| |||||||||| ||||||||||||||||||||||||| |||||| ||| | |||| |||    
T  34075 agtaggaggatgattcctcaggaaggtctcaagcatcctcgactcagcattcacaccagcatttgcattaggctgttgccccacagcttgatctacagct 33976  T
Q  278 tgtagtgcagca 289  Q
    ||||||||||||    
T  33975 tgtagtgcagca 33964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 42633 - 42717
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccaca 262  Q
    |||||||||||| ||||||||||| || | ||||||||||   |||||||| |||||| |||||||||||||||| ||| |||||    
T  42633 agtaggaggatggttcctcagaaaagtctctagcatcctcacttcagcattagcaccaacatttgcattaggctgatgtaccaca 42717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 76353 - 76437
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccaca 262  Q
    |||||||||||| ||||||||||| || | ||||||||||   |||||||| |||||| |||||||||||||||| ||| |||||    
T  76353 agtaggaggatggttcctcagaaaagtctctagcatcctcacttcagcattagcaccaacatttgcattaggctgatgtaccaca 76437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 240 - 353
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    ||||||||||||||||||||| ||||| |  |||||||||| |||| ||||| ||||||||||||||||||| ||||| |||||| ||| ||||||| ||    
T  240 agtaggaggatgattcctcaggaaggtctcaagcatcctcgactcatcattcacaccagcatttgcattaggttgttgccccacagcttgagctacgact 339  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  340 tgtagtgcagcagc 353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 41314 - 41201
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||||||||| || | |||||||||||  |||||| | ||||||||||| |||||||||||||| |||||| ||| ||| ||||||    
T  41314 agtaggaggatgattcctcagaaaagtctctagcatcctcgcttcagcacttgcaccagcattcgcattaggctgttgccccacagcttgagcgacggct 41215  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  41214 tgtagtgcagcagc 41201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 179 - 291
Target Start/End: Complemental strand, 23528 - 23416
Alignment:
Q  179 gtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggctt 278  Q
    |||||||||||||||||||  || || | |||||||||||||||||||||| |||||||||| |||||||| ||||| |||||| ||| |||||| ||||    
T  23528 gtaggaggatgattcctcatgaaagtctctagcatcctcgtctcagcattcacaccagcattcgcattaggttgttgccccacatctttagctacagctt 23429  T
Q  279 gtagtgcagcagc 291  Q
    |||||||||||||    
T  23428 gtagtgcagcagc 23416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 64; Significance: 5e-28; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 180 - 291
Target Start/End: Complemental strand, 194169 - 194058
Alignment:
Q  180 taggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttg 279  Q
    |||||||||||||||||||||| || |  |||||||||| ||  |||||||| |||||||| ||||||||||||||||| ||||||| ||||| ||||||    
T  194169 taggaggatgattcctcagaaaagtctcaagcatcctcgacttggcattcgctccagcattcgcattaggctgttgtcctacaacttgagctatggcttg 194070  T
Q  280 tagtgcagcagc 291  Q
    ||||||||||||    
T  194069 tagtgcagcagc 194058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 20887 - 20778
Alignment:
Q  182 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 281  Q
    ||||||||||||||||  || || || | ||| || |||||||||||| ||||||||||||| ||||| ||||| |||||| ||| |||||| |||||||    
T  20887 ggaggatgattcctcatgaaagtctacaacattcttgtctcagcattcacaccagcatttgcgttaggttgttgccccacagcttgagctacagcttgta 20788  T
Q  282 gtgcagcagc 291  Q
    ||||||||||    
T  20787 gtgcagcagc 20778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 291
Target Start/End: Complemental strand, 16329 - 16256
Alignment:
Q  218 gtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    |||||||||||| ||||||||||||| ||||| ||||| |||||| ||| |||||| |||||||||||||||||    
T  16329 gtctcagcattcacaccagcatttgcgttaggttgttgccccacagcttgagctacagcttgtagtgcagcagc 16256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 1018 - 1131
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||| | | ||||||||| |||||||||||||| |||||| ||| ||| |||||     
T  1018 agtaggaggatgattcctcagaaaagtctatagcatcctcgcttcagcacttgaaccagcattcgcattaggctgttgccccacagcttgagccacggcc 1117  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  1118 tgtagtgcagcagc 1131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 5435 - 5548
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||| | | ||||||||| |||||||||||||| |||||| ||| ||| |||||     
T  5435 agtaggaggatgattcctcagaaaagtctatagcatcctcgcttcagcacttgaaccagcattcgcattaggctgttgccccacagcttgagccacggcc 5534  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  5535 tgtagtgcagcagc 5548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 49644 - 49535
Alignment:
Q  182 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 281  Q
    ||||||||||||||||||||||| |  |||||||||   ||||||||||||||||||||  ||||||||||||| |||||| ||| ||||||||||||||    
T  49644 ggaggatgattcctcagaaaggtctccagcatcctcacttcagcattcgcaccagcattcacattaggctgttgccccacagcttgagctacggcttgta 49545  T
Q  282 gtgcagcagc 291  Q
     |||||||||    
T  49544 atgcagcagc 49535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 180 - 291
Target Start/End: Complemental strand, 14889 - 14778
Alignment:
Q  180 taggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttg 279  Q
    ||||||||||||||||||  ||||| |  || |||| ||||||||||||| |||||||||| |||||||||||||| |||||| ||| ||||||| ||||    
T  14889 taggaggatgattcctcatgaaggtctcaagaatccacgtctcagcattcacaccagcattcgcattaggctgttgccccacagcttgagctacgacttg 14790  T
Q  280 tagtgcagcagc 291  Q
    ||||||||||||    
T  14789 tagtgcagcagc 14778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 54775 - 54662
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||||||||| |||| ||||||||||   |||||||| |||||||||||||||  |||||| ||||||||||||| ||||||  ||    
T  54775 agtaggaggatgattcctcagaaaagtttctagcatcctcacttcagcattagcaccagcatttgcagcaggctgatgtcccacaacttgagctacaact 54676  T
Q  278 tgtagtgcagcagc 291  Q
    | ||||||| ||||    
T  54675 tctagtgcaacagc 54662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 3226 - 3339
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    ||||||||||||||||||| ||||||| | |||||||||||  |||||| | ||||||||||| ||||||||||| ||||| ||| ||| |||||| |||    
T  3226 agtaggaggatgattcctccgaaaggtctctagcatcctcgcttcagcacttgcaccagcattcgcattaggctgatgtccaacagcttgagctacagct 3325  T
Q  278 tgtagtgcagcagc 291  Q
    | ||||||||||||    
T  3326 tctagtgcagcagc 3339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1459 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold1459
Description:

Target: scaffold1459; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 179 - 291
Target Start/End: Complemental strand, 394 - 282
Alignment:
Q  179 gtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggctt 278  Q
    |||||||||||||||||||  || || | |||||||||||||||||||||| | |||||||| |||||||| ||||| |||| | ||| |||||| ||||    
T  394 gtaggaggatgattcctcatgaaagtctctagcatcctcgtctcagcattcactccagcattcgcattaggttgttgccccatagcttgagctacagctt 295  T
Q  279 gtagtgcagcagc 291  Q
    |||||||||||||    
T  294 gtagtgcagcagc 282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 179 - 291
Target Start/End: Original strand, 738 - 850
Alignment:
Q  179 gtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggctt 278  Q
    |||||||||||||||||||  || || |  | ||||||||||||||||||| |||||||||| |||||||| ||||| |||||| ||| |||||| ||||    
T  738 gtaggaggatgattcctcatgaaagtctccaacatcctcgtctcagcattcacaccagcattcgcattaggttgttgccccacagcttgagctacagctt 837  T
Q  279 gtagtgcagcagc 291  Q
    |||||||||||||    
T  838 gtagtgcagcagc 850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 4552 - 4665
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||||||||| |  | |||||||||||  |||| | | ||||||||||| |||||||||||||| |||||| ||| ||| |||||     
T  4552 agtaggaggatgattcctcagaaaagactgtagcatcctcgcttcagtacttgcaccagcattcgcattaggctgttgccccacagcttgagccacggcc 4651  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  4652 tgtagtgcagcagc 4665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 3850 - 3737
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||||||||| || | |||||||||||  ||| || | ||||||||||| |||||||| ||||| |||||| ||| ||| |||||     
T  3850 agtaggaggatgattcctcagaaaagtctctagcatcctcgcttcaacacttgcaccagcattcgcattaggttgttgccccacagcttgagccacggcc 3751  T
Q  278 tgtagtgcagcagc 291  Q
    ||||||||||||||    
T  3750 tgtagtgcagcagc 3737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 5e-22; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 14043656 - 14043769
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||||||||| ||||||| |||||||   |||||||| ||| ||||||||||||||||||| ||||||||| ||| ||| ||  ||    
T  14043656 agtaggaggatgattcctcagaaaagtttataacatcctcacatcagcatttgcatcagcatttgcattaggctgatgtcccacagcttgagccacaact 14043755  T
Q  278 tgtagtgcagcagc 291  Q
    | | ||||||||||    
T  14043756 tctcgtgcagcagc 14043769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 14353686 - 14353799
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||||||||| ||||||| |||||||   |||||||| ||| ||||||||||||||||||| ||||||||| ||| ||| ||  ||    
T  14353686 agtaggaggatgattcctcagaaaagtttataacatcctcacatcagcatttgcatcagcatttgcattaggctgatgtcccacagcttgagccacaact 14353785  T
Q  278 tgtagtgcagcagc 291  Q
    | | ||||||||||    
T  14353786 tctcgtgcagcagc 14353799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 291
Target Start/End: Complemental strand, 15145230 - 15145119
Alignment:
Q  180 taggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttg 279  Q
    |||||||||||||||||||||| || | ||||||||||   ||||||||  ||||||||||  ||  |||||| ||||| ||| ||| |||||| ||||     
T  15145230 taggaggatgattcctcagaaacgtctctagcatcctcacttcagcatttacaccagcattcccaacaggctgatgtcctacagcttgagctacagcttc 15145131  T
Q  280 tagtgcagcagc 291  Q
    ||||||||||||    
T  15145130 tagtgcagcagc 15145119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 291
Target Start/End: Original strand, 13690042 - 13690112
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  13690042 tcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 13690112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 211 - 291
Target Start/End: Complemental strand, 11549381 - 11549301
Alignment:
Q  211 catcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||||  |||||||||| || ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  11549381 catcctcgtctcagcattaacaccagcattcgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 11549301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 11233482 - 11233412
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    |||| |||||||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  11233482 tcagtattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 11233412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 15157326 - 15157256
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||| ||||||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  15157326 tcagcgttcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 15157256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 270
Target Start/End: Complemental strand, 11526666 - 11526574
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagc 270  Q
    |||||||||||||||||||||||| || |  | |||||||   |||||||| |||||| | || ||||||||||| || |||||| |||||||    
T  11526666 agtaggaggatgattcctcagaaaagtctccaacatcctcacttcagcattagcaccaacgttagcattaggctgatgccccacagcttaagc 11526574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 291
Target Start/End: Original strand, 14958499 - 14958579
Alignment:
Q  211 catcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||||  ||||||||||  | ||||| |||||||||||| |||  || || |||||||| | ||||||    
T  14958499 catcctcgtctcagcattaacaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagtagcagc 14958579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 291
Target Start/End: Original strand, 37440 - 37552
Alignment:
Q  179 gtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggctt 278  Q
    |||||||||||||||||||  || || |  ||||||||||||||||||||| ||||| |||| |||||||| | ||| |||||| ||| |||||||||||    
T  37440 gtaggaggatgattcctcatgaaagtctcgagcatcctcgtctcagcattcacaccaacattcgcattaggttattgccccacagcttgagctacggctt 37539  T
Q  279 gtagtgcagcagc 291  Q
    ||||| |||||||    
T  37540 gtagttcagcagc 37552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 288
Target Start/End: Complemental strand, 7455 - 7345
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||||||||| ||||  | |||||||   |||||||| |||||| ||||| |||||||||| ||||||||| ||| |||||| |||    
T  7455 agtaggaggatgattcctcagaaaagtttccaacatcctcacttcagcattagcaccaacattttcattaggctgatgtcccacagcttgagctacagct 7356  T
Q  278 tgtagtgcagc 288  Q
    | |||||||||    
T  7355 tctagtgcagc 7345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 2713 - 2826
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    ||||||||||||||| |||||||| || |  |||||||||   |||||||| |||||||||||||||  |||||| ||||||||| ||| |||||| |||    
T  2713 agtaggaggatgatttctcagaaaagtctcaagcatcctcacttcagcattagcaccagcatttgcagcaggctgatgtcccacagcttgagctacagct 2812  T
Q  278 tgtagtgcagcagc 291  Q
    | ||||||||||||    
T  2813 tctagtgcagcagc 2826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 15915 - 15802
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||||||||| || | |||||||||||  |||||| | ||||||||||| |||||||| ||||| |||||| ||| ||| ||| |     
T  15915 agtaggaggatgattcctcagaaaagtctctagcatcctcgcttcagcacttgcaccagcattcgcattaggttgttgccccacagcttgagccacgacc 15816  T
Q  278 tgtagtgcagcagc 291  Q
    ||| ||||||||||    
T  15815 tgttgtgcagcagc 15802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 854 - 963
Alignment:
Q  182 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 281  Q
    ||||||||||||||||  ||||| |  | |||||| ||||||||| || |||| |||||||||||||| |||||| ||||| |||  || || |||||||    
T  854 ggaggatgattcctcatgaaggtctccaacatcctagtctcagcagtcacacccgcatttgcattaggttgttgttccacagcttgggcaacagcttgta 953  T
Q  282 gtgcagcagc 291  Q
    | ||||||||    
T  954 gagcagcagc 963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 291
Target Start/End: Complemental strand, 138862 - 138789
Alignment:
Q  218 gtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||| || ||||||||||||||||||  |||||||||||| |||  || || |||||||| ||||||||    
T  138862 gtctcagcagtcacaccagcatttgcattagattgttgtcccacagcttgggcaacagcttgtagagcagcagc 138789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 49; Significance: 5e-19; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 12491 - 12563
Alignment:
Q  219 tctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||||||||||| ||||| |||||||||||| |||| || || |||||||||||||||||    
T  12491 tctcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttaggcaacagcttgtagtgcagcagc 12563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 22019 - 22091
Alignment:
Q  219 tctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||||||||||| ||||| |||||||||||| |||  || ||  ||||||||||||||||    
T  22019 tctcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacaacttgtagtgcagcagc 22091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 291
Target Start/End: Original strand, 56035 - 56115
Alignment:
Q  211 catcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||| |||||||||| ||||||||||| || || || |||||||||||| |||  || || |||||||  ||||||||    
T  56035 catcctcatctcagcatttgcaccagcattcgcgttgggttgttgtcccacagcttgggcaacagcttgtaaagcagcagc 56115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 39900 - 39787
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||| |||||||| | |||||||||||  |||||| | ||||||||||||| |  |||||| ||||| ||| ||| |||||| |||    
T  39900 agtaggaggatgattccttagaaaggtctctagcatcctcgcttcagcacttgcaccagcatttgaaccaggctgatgtccaacagcttgagctacagct 39801  T
Q  278 tgtagtgcagcagc 291  Q
    | ||||||| ||||    
T  39800 tctagtgcatcagc 39787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 1316 - 1203
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||||||||| || |  | |||||||   |||||||| ||||||||||||||||||||||| || || ||| ||| ||| || |||    
T  1316 agtaggaggatgattcctcagaaaagtatccaacatcctcacttcagcattagcaccagcatttgcattaggctgatgccctacagcttgagccacagct 1217  T
Q  278 tgtagtgcagcagc 291  Q
    | | ||||||||||    
T  1216 tctggtgcagcagc 1203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 4180 - 4067
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    |||||||||||||||||||||||| || |  | |||||||   |||||||| ||||||||||||||||||||||| || || ||| ||| ||| || |||    
T  4180 agtaggaggatgattcctcagaaaagtatccaacatcctcacttcagcattagcaccagcatttgcattaggctgatgccctacagcttgagccacagct 4081  T
Q  278 tgtagtgcagcagc 291  Q
    | | ||||||||||    
T  4080 tctggtgcagcagc 4067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 11406 - 11478
Alignment:
Q  219 tctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||||||||||||| ||||| | |||||||||| |||  || || |||||||||||||||||    
T  11406 tctcagcattcgcaccagcatttgcgttaggttattgtcccacagcttgggcaacagcttgtagtgcagcagc 11478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 8653 - 8565
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaactt 266  Q
    |||||||||||||||||||||||| ||||  | ||||||    || ||||| ||||||||||| |||||||||||||| ||||||||||    
T  8653 agtaggaggatgattcctcagaaaagtttccaacatcctaacttcggcattagcaccagcattagcattaggctgttgccccacaactt 8565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 291
Target Start/End: Original strand, 4549 - 4656
Alignment:
Q  184 aggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagt 283  Q
    |||||||||||||||||| |||| ||||||||||   ||||||||  ||||||||||||||  |||||| ||||||||| ||| ||| ||  |||  |||    
T  4549 aggatgattcctcagaaaagtttctagcatcctcacttcagcattaccaccagcatttgcagcaggctgatgtcccacagcttgagcaacaacttcaagt 4648  T
Q  284 gcagcagc 291  Q
    ||||||||    
T  4649 gcagcagc 4656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 291
Target Start/End: Complemental strand, 17278 - 17168
Alignment:
Q  180 taggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttg 279  Q
    ||||||||||||||| |||||| |||| ||||||||||   ||| |||| |||||||||||||||  | |||| ||||||||| ||| ||||||  |||     
T  17278 taggaggatgattcc-cagaaaagtttctagcatcctcacttcaacattagcaccagcatttgcagcatgctgatgtcccacagcttgagctacaacttc 17180  T
Q  280 tagtgcagcagc 291  Q
    ||||||||||||    
T  17179 tagtgcagcagc 17168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 289
Target Start/End: Original strand, 9224 - 9335
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 277  Q
    ||||||||||||||||||||||||||| | ||||||||| |  |||||| |  |||||| |||||||  |||||| ||||| ||| ||| ||||||  ||    
T  9224 agtaggaggatgattcctcagaaaggtctctagcatccttgcttcagcacttacaccagtatttgcagcaggctgatgtccaacagctttagctacaact 9323  T
Q  278 tgtagtgcagca 289  Q
    | ||||||||||    
T  9324 tctagtgcagca 9335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 11727 - 11665
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatt 240  Q
    ||||| |||||||||||||| |||||| |  |||||||||| |||||||||||||||||||||    
T  11727 agtagcaggatgattcctcataaaggtctcaagcatcctcgactcagcattcgcaccagcatt 11665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 104820 - 104750
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    |||||||| ||||||||| ||||||||||||| ||||||||| ||| |||||| |||| |||| |||||||    
T  104820 tcagcatttgcaccagcacttgcattaggctgatgtcccacagcttgagctacagcttctagtacagcagc 104750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 262
Target Start/End: Original strand, 21177 - 21218
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccaca 262  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  21177 tcagcattagcaccagcattcgcattaggctgttgtcccaca 21218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 22193 - 22302
Alignment:
Q  182 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 281  Q
    ||||||||||| ||||  ||||| |  | |||||| |||||||||||| |||||||||| || ||||| |||||||||||| |||  || || |||||||    
T  22193 ggaggatgatttctcatgaaggtctccaacatcctggtctcagcattcacaccagcattagcgttaggttgttgtcccacagcttgggcaacagcttgta 22292  T
Q  282 gtgcagcagc 291  Q
    | ||||||||    
T  22293 gagcagcagc 22302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 15429 - 15538
Alignment:
Q  182 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 281  Q
    ||||||||||| ||||  ||||| |  | |||||| |||||||||||  |||||||||| || ||||| |||||||||||| |||  || || |||||||    
T  15429 ggaggatgatttctcatgaaggtctccaacatcctggtctcagcattaacaccagcattagcgttaggttgttgtcccacagcttgggcaacagcttgta 15528  T
Q  282 gtgcagcagc 291  Q
    | ||||||||    
T  15529 gagcagcagc 15538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 211 - 291
Target Start/End: Original strand, 49696 - 49776
Alignment:
Q  211 catcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    |||||||||||||||||| ||||||||||| || ||||| |||||||||||| |||  || || |||||| | ||||||||    
T  49696 catcctcgtctcagcatttgcaccagcattcgctttaggttgttgtcccacagcttgggcaacagcttgtcgagcagcagc 49776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 211 - 291
Target Start/End: Original strand, 425333 - 425413
Alignment:
Q  211 catcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    |||||| ||||||||||||||||||||||| || ||||| |||||||||||| |||  || ||  ||||||| ||||||||    
T  425333 catcctagtctcagcattcgcaccagcattcgcgttaggttgttgtcccacagcttgggcaacaacttgtagagcagcagc 425413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 138691 - 138800
Alignment:
Q  182 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 281  Q
    ||||||||||| ||||  ||||| |  | |||||| |||||| || || ||||| ||||||||||||| |||||||||||| |||  || || |||||||    
T  138691 ggaggatgatttctcatgaaggtctccaacatcctagtctcaacaatcacaccaacatttgcattaggttgttgtcccacagcttgggcaacagcttgta 138790  T
Q  282 gtgcagcagc 291  Q
    | ||||||||    
T  138791 gagcagcagc 138800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 291
Target Start/End: Original strand, 42193 - 42266
Alignment:
Q  218 gtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    |||||||||||||||||||||||||| ||||| |||| ||||||| |||  || ||  ||||||| ||||||||    
T  42193 gtctcagcattcgcaccagcatttgcgttaggttgttatcccacagcttgggcaacaacttgtagagcagcagc 42266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 229151 - 229042
Alignment:
Q  182 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 281  Q
    ||||||||||||||||  ||||| |  | |||||| |||| ||||||| |||||||||| || ||||| |||||||||||| |||  || ||  ||||||    
T  229151 ggaggatgattcctcatgaaggtctccaacatcctggtcttagcattcacaccagcattcgcgttaggttgttgtcccacagcttgggcaacaacttgta 229052  T
Q  282 gtgcagcagc 291  Q
    | ||||||||    
T  229051 gagcagcagc 229042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 262
Target Start/End: Original strand, 5758 - 5830
Alignment:
Q  190 attcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccaca 262  Q
    |||||||||||| || | |||||||||||  |||||| | |||||| |||| |||||||||||||| ||||||    
T  5758 attcctcagaaaagtctctagcatcctcgcttcagcacttgcaccatcattcgcattaggctgttgccccaca 5830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 18165 - 18245
Alignment:
Q  182 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccaca 262  Q
    ||||||||||||||||  || || |  | |||||| |||||||||||| |||||||||| || ||||| ||||||||||||    
T  18165 ggaggatgattcctcatgaatgtctccaacatcctggtctcagcattcacaccagcattcgcgttaggttgttgtcccaca 18245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 442653 - 442737
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccaca 262  Q
    |||||| ||||||||||||||||| ||||  | ||||||    |||||||| |||||| |||| |||||||||||||| ||||||    
T  442653 agtaggtggatgattcctcagaaaagtttccaacatcctaacttcagcattagcaccaacattagcattaggctgttgccccaca 442737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 237
Target Start/End: Complemental strand, 15826 - 15767
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagc 237  Q
    |||||||||||||||||||||||| |||| |||||| |||   |||||||| ||||||||    
T  15826 agtaggaggatgattcctcagaaaagtttctagcattctcacttcagcattagcaccagc 15767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 789 - 851
Alignment:
Q  178 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatt 240  Q
    ||||||||||||||||||||  || || |  | ||||||||||||||||||| ||||||||||    
T  789 agtaggaggatgattcctcatgaaagtctcaaccatcctcgtctcagcattcacaccagcatt 851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 30316 - 30250
Alignment:
Q  225 cattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||||||||||   ||||| || |||||||||||| ||| |||||||||||  |||||||||||    
T  30316 cattcgcaccagcaccagcattcggttgttgtcccacagcttgagctacggcttcaagtgcagcagc 30250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 1105 - 1166
Alignment:
Q  179 gtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatt 240  Q
    |||||||||||||||||||  || || |  ||||||||||||||||||||| | ||||||||    
T  1105 gtaggaggatgattcctcatgaatgtctcaagcatcctcgtctcagcattcaccccagcatt 1166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 13329 - 13220
Alignment:
Q  182 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 281  Q
    ||||||||||||||||  || || |  | |||||| |||||| ||||| |||||||||| || ||||| |||||||||||| |||  || ||  ||||||    
T  13329 ggaggatgattcctcatgaacgtctccaacatcctggtctcatcattcacaccagcattcgcgttaggttgttgtcccacagcttgggcaacaacttgta 13230  T
Q  282 gtgcagcagc 291  Q
    | ||||||||    
T  13229 gagcagcagc 13220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 262
Target Start/End: Complemental strand, 12858 - 12817
Alignment:
Q  221 tcagcattcgcaccagcatttgcattaggctgttgtcccaca 262  Q
    |||||||| |||||||| || |||||||||||||||||||||    
T  12858 tcagcattagcaccagcgttagcattaggctgttgtcccaca 12817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 291
Target Start/End: Complemental strand, 23481 - 23386
Alignment:
Q  195 tcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 291  Q
    ||||||| || | |||| ||||| | |||||||| |  ||| |||||||||| || |||||||||||| ||| ||| ||| ||||||||||||||||    
T  23481 tcagaaaagtctctagcttcctcatttcagcattagtcccaacatttgcatt-ggttgttgtcccacagcttgagccacgacttgtagtgcagcagc 23386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 933 - 1017
Alignment:
Q  181 aggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaact 265  Q
    ||||||||| ||||||||||| || | || ||| ||   |||||||||||||||| |||| |||||  |||||||||| ||||||    
T  933 aggaggatggttcctcagaaaagtctctaacattctgacctcagcattcgcaccaacattagcattttgctgttgtcctacaact 1017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University