View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20902_high_3 (Length: 617)

Name: NF20902_high_3
Description: NF20902
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20902_high_3
NF20902_high_3
[»] chr8 (32 HSPs)
chr8 (18-368)||(35853874-35854226)
chr8 (371-600)||(35866769-35866985)
chr8 (18-316)||(35858445-35858745)
chr8 (377-493)||(28562583-28562699)
chr8 (377-492)||(28568080-28568195)
chr8 (377-492)||(28575673-28575788)
chr8 (373-493)||(27035153-27035273)
chr8 (377-486)||(26628822-26628931)
chr8 (373-495)||(36068238-36068360)
chr8 (373-493)||(3585609-3585729)
chr8 (373-493)||(11174222-11174342)
chr8 (373-493)||(11646324-11646444)
chr8 (373-492)||(7147071-7147190)
chr8 (373-492)||(40058303-40058422)
chr8 (373-492)||(40918731-40918850)
chr8 (373-493)||(30999523-30999643)
chr8 (373-493)||(43275398-43275518)
chr8 (373-493)||(2539929-2540049)
chr8 (377-481)||(27563878-27563982)
chr8 (373-492)||(37345729-37345848)
chr8 (377-492)||(45400770-45400885)
chr8 (373-475)||(20546310-20546412)
chr8 (377-463)||(13880984-13881070)
chr8 (377-479)||(10180881-10180983)
chr8 (402-457)||(37510457-37510512)
chr8 (252-301)||(35727496-35727545)
chr8 (387-463)||(167632-167708)
chr8 (404-463)||(13327788-13327847)
chr8 (139-233)||(35748233-35748330)
chr8 (18-100)||(35727703-35727785)
chr8 (383-440)||(33751233-33751289)
chr8 (387-463)||(11993902-11993978)
[»] chr5 (34 HSPs)
chr5 (377-492)||(734339-734454)
chr5 (373-492)||(25683229-25683348)
chr5 (385-486)||(39071052-39071153)
chr5 (373-493)||(37900622-37900742)
chr5 (383-494)||(10285056-10285167)
chr5 (373-496)||(30720488-30720611)
chr5 (373-492)||(40886610-40886729)
chr5 (377-485)||(11319718-11319826)
chr5 (373-493)||(12806852-12806972)
chr5 (378-493)||(1056624-1056737)
chr5 (373-492)||(36561099-36561218)
chr5 (377-458)||(11795317-11795398)
chr5 (373-494)||(23097722-23097843)
chr5 (371-490)||(16983413-16983532)
chr5 (373-493)||(25773807-25773927)
chr5 (378-463)||(16054274-16054359)
chr5 (378-463)||(30402991-30403076)
chr5 (383-492)||(26168076-26168185)
chr5 (384-492)||(1055773-1055885)
chr5 (377-449)||(21638931-21639003)
chr5 (389-455)||(15629310-15629376)
chr5 (383-439)||(11797714-11797770)
chr5 (454-494)||(39070881-39070921)
chr5 (404-463)||(42174263-42174322)
chr5 (373-463)||(12723097-12723187)
chr5 (373-463)||(12784580-12784670)
chr5 (447-493)||(21639770-21639816)
chr5 (378-463)||(31802780-31802864)
chr5 (387-463)||(1297890-1297966)
chr5 (387-463)||(4175632-4175708)
chr5 (378-450)||(4985318-4985390)
chr5 (377-445)||(7408340-7408408)
chr5 (387-463)||(9076062-9076138)
chr5 (387-463)||(42911541-42911617)
[»] chr3 (36 HSPs)
chr3 (377-492)||(18355868-18355983)
chr3 (377-481)||(54086714-54086818)
chr3 (384-495)||(6901730-6901840)
chr3 (373-492)||(13365001-13365120)
chr3 (373-492)||(46694110-46694229)
chr3 (385-495)||(29375302-29375412)
chr3 (383-495)||(19241665-19241777)
chr3 (373-493)||(36881438-36881558)
chr3 (373-493)||(23087930-23088050)
chr3 (373-492)||(3383234-3383353)
chr3 (384-483)||(24064389-24064488)
chr3 (407-494)||(26783661-26783748)
chr3 (373-492)||(32834989-32835108)
chr3 (378-481)||(48436387-48436490)
chr3 (383-493)||(48820508-48820618)
chr3 (373-494)||(13703370-13703491)
chr3 (373-492)||(199013-199132)
chr3 (377-463)||(52805057-52805142)
chr3 (377-455)||(53559648-53559726)
chr3 (373-475)||(43750294-43750396)
chr3 (386-457)||(1455186-1455257)
chr3 (384-487)||(19896935-19897038)
chr3 (402-451)||(37293595-37293644)
chr3 (384-485)||(52009051-52009158)
chr3 (398-464)||(31873891-31873957)
chr3 (384-486)||(48963288-48963390)
chr3 (378-463)||(48151994-48152079)
chr3 (378-463)||(48214076-48214161)
chr3 (399-463)||(17755357-17755421)
chr3 (399-463)||(19056677-19056741)
chr3 (373-431)||(37781094-37781152)
chr3 (454-495)||(13364840-13364881)
chr3 (378-463)||(32980649-32980734)
chr3 (373-433)||(2154186-2154246)
chr3 (387-463)||(34266599-34266675)
chr3 (373-433)||(43159907-43159967)
[»] chr2 (33 HSPs)
chr2 (378-492)||(40756911-40757025)
chr2 (373-495)||(22388135-22388257)
chr2 (384-463)||(19976497-19976576)
chr2 (377-486)||(37284525-37284632)
chr2 (373-493)||(23366947-23367067)
chr2 (373-493)||(28110094-28110214)
chr2 (386-493)||(32838928-32839035)
chr2 (373-493)||(3519065-3519185)
chr2 (377-489)||(36447420-36447532)
chr2 (373-492)||(12969740-12969859)
chr2 (377-492)||(39561895-39562005)
chr2 (373-493)||(1102659-1102779)
chr2 (373-493)||(39938328-39938448)
chr2 (373-492)||(37673743-37673862)
chr2 (373-492)||(1646445-1646564)
chr2 (404-463)||(14779964-14780023)
chr2 (384-458)||(34242143-34242217)
chr2 (392-463)||(1002760-1002831)
chr2 (387-485)||(4917933-4918031)
chr2 (377-451)||(27900991-27901065)
chr2 (387-463)||(479131-479207)
chr2 (387-463)||(15677449-15677525)
chr2 (383-431)||(28401396-28401444)
chr2 (404-463)||(14541340-14541399)
chr2 (378-463)||(13753964-13754049)
chr2 (387-463)||(36375580-36375656)
chr2 (378-419)||(36917009-36917050)
chr2 (387-463)||(10812208-10812284)
chr2 (387-463)||(11560205-11560281)
chr2 (379-419)||(32901136-32901176)
chr2 (387-463)||(34357187-34357263)
chr2 (373-433)||(43077331-43077391)
chr2 (387-463)||(44360443-44360519)
[»] chr4 (38 HSPs)
chr4 (377-492)||(19692884-19692999)
chr4 (377-492)||(19703469-19703584)
chr4 (378-485)||(6128956-6129063)
chr4 (373-493)||(22321267-22321387)
chr4 (373-495)||(21310579-21310701)
chr4 (378-496)||(32543642-32543760)
chr4 (373-493)||(14261202-14261322)
chr4 (373-493)||(24706246-24706366)
chr4 (373-493)||(25704809-25704929)
chr4 (373-492)||(12071718-12071837)
chr4 (373-492)||(40122487-40122606)
chr4 (397-492)||(50839031-50839126)
chr4 (373-491)||(21064919-21065037)
chr4 (373-493)||(20249013-20249133)
chr4 (373-493)||(44568995-44569115)
chr4 (373-482)||(50768020-50768129)
chr4 (373-495)||(21661532-21661654)
chr4 (373-495)||(21670296-21670418)
chr4 (377-482)||(18507276-18507381)
chr4 (377-463)||(48652386-48652472)
chr4 (384-475)||(31892401-31892492)
chr4 (382-453)||(51777771-51777841)
chr4 (378-427)||(26676645-26676694)
chr4 (378-464)||(8735400-8735486)
chr4 (418-485)||(26676577-26676645)
chr4 (387-463)||(39683870-39683946)
chr4 (378-450)||(42629342-42629414)
chr4 (387-463)||(53599942-53600018)
chr4 (387-463)||(56576259-56576335)
chr4 (399-490)||(20714322-20714413)
chr4 (378-415)||(20714426-20714463)
chr4 (387-463)||(3436223-3436299)
chr4 (393-433)||(26906551-26906591)
chr4 (387-463)||(38542432-38542508)
chr4 (387-439)||(38617852-38617904)
chr4 (387-463)||(42513182-42513258)
chr4 (387-463)||(44069043-44069119)
chr4 (387-459)||(50623430-50623502)
[»] chr6 (22 HSPs)
chr6 (373-495)||(17942601-17942723)
chr6 (373-493)||(15064694-15064814)
chr6 (373-494)||(8235783-8235904)
chr6 (373-493)||(8626640-8626760)
chr6 (373-493)||(13757365-13757485)
chr6 (373-492)||(29260350-29260469)
chr6 (373-493)||(1605736-1605856)
chr6 (373-492)||(7761458-7761577)
chr6 (377-495)||(20398235-20398353)
chr6 (373-492)||(4129585-4129703)
chr6 (384-495)||(1814762-1814873)
chr6 (377-455)||(3798261-3798339)
chr6 (383-482)||(26860932-26861031)
chr6 (373-492)||(31559738-31559857)
chr6 (373-492)||(30734483-30734602)
chr6 (373-439)||(847829-847895)
chr6 (373-433)||(31244891-31244951)
chr6 (404-463)||(30236987-30237046)
chr6 (378-463)||(3849074-3849159)
chr6 (377-418)||(14287149-14287190)
chr6 (400-489)||(24120645-24120734)
chr6 (387-463)||(22050058-22050134)
[»] chr1 (34 HSPs)
chr1 (377-485)||(24876723-24876831)
chr1 (373-495)||(23526397-23526519)
chr1 (373-493)||(284491-284611)
chr1 (377-493)||(51064753-51064869)
chr1 (373-492)||(34458724-34458843)
chr1 (373-493)||(40783656-40783776)
chr1 (373-484)||(40261293-40261404)
chr1 (373-492)||(321784-321903)
chr1 (373-492)||(23045279-23045398)
chr1 (377-492)||(31003787-31003902)
chr1 (373-492)||(47037852-47037971)
chr1 (373-487)||(46771796-46771910)
chr1 (385-492)||(18396864-18396971)
chr1 (384-493)||(24771905-24772014)
chr1 (383-493)||(1837826-1837937)
chr1 (377-487)||(14925626-14925734)
chr1 (378-485)||(25929261-25929368)
chr1 (384-455)||(40052501-40052572)
chr1 (378-495)||(23166848-23166965)
chr1 (377-492)||(27143014-27143127)
chr1 (373-485)||(31061463-31061578)
chr1 (373-493)||(33082902-33083022)
chr1 (373-486)||(27210961-27211074)
chr1 (398-485)||(40562293-40562380)
chr1 (401-456)||(14350510-14350565)
chr1 (377-423)||(3657236-3657282)
chr1 (398-456)||(1749457-1749515)
chr1 (378-463)||(19455542-19455626)
chr1 (378-463)||(32347987-32348072)
chr1 (399-463)||(19093277-19093341)
chr1 (385-455)||(17581069-17581139)
chr1 (378-463)||(5597832-5597917)
chr1 (387-463)||(35531447-35531523)
chr1 (373-433)||(51613450-51613510)
[»] chr7 (21 HSPs)
chr7 (373-495)||(27813969-27814091)
chr7 (373-493)||(47110608-47110728)
chr7 (373-493)||(36453123-36453243)
chr7 (377-492)||(16662255-16662370)
chr7 (377-492)||(17636615-17636730)
chr7 (373-493)||(25614352-25614472)
chr7 (373-492)||(10981666-10981785)
chr7 (373-494)||(40349120-40349240)
chr7 (373-457)||(3091671-3091755)
chr7 (377-463)||(27941013-27941099)
chr7 (387-493)||(16360549-16360654)
chr7 (383-463)||(24456794-24456874)
chr7 (373-434)||(3498813-3498874)
chr7 (381-463)||(7743427-7743509)
chr7 (377-489)||(8380100-8380210)
chr7 (378-463)||(35112438-35112523)
chr7 (387-463)||(31399089-31399165)
chr7 (384-450)||(37983300-37983366)
chr7 (387-463)||(33257890-33257966)
chr7 (403-457)||(28200488-28200542)
chr7 (383-419)||(6737258-6737294)
[»] scaffold0939 (1 HSPs)
scaffold0939 (384-462)||(1110-1188)
[»] scaffold0168 (1 HSPs)
scaffold0168 (377-493)||(7830-7946)
[»] scaffold1770 (1 HSPs)
scaffold1770 (373-492)||(320-438)
[»] scaffold0054 (1 HSPs)
scaffold0054 (384-492)||(45622-45730)
[»] scaffold0025 (1 HSPs)
scaffold0025 (378-458)||(65199-65279)
[»] scaffold0343 (1 HSPs)
scaffold0343 (377-482)||(6911-7015)
[»] scaffold0076 (1 HSPs)
scaffold0076 (377-493)||(15322-15438)
[»] scaffold0056 (1 HSPs)
scaffold0056 (377-482)||(71245-71350)
[»] scaffold0062 (1 HSPs)
scaffold0062 (384-464)||(295-375)
[»] scaffold0060 (1 HSPs)
scaffold0060 (377-493)||(10904-11025)
[»] scaffold0001 (1 HSPs)
scaffold0001 (378-439)||(419639-419700)
[»] scaffold0172 (1 HSPs)
scaffold0172 (387-463)||(26283-26359)
[»] scaffold0129 (1 HSPs)
scaffold0129 (441-493)||(19007-19059)
[»] scaffold0009 (1 HSPs)
scaffold0009 (373-433)||(147270-147330)


Alignment Details
Target: chr8 (Bit Score: 330; Significance: 0; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 18 - 368
Target Start/End: Original strand, 35853874 - 35854226
Alignment:
Q  18 attggatcattgaactccaaaagcaagggaggataaattaagccaaattgagccatgaagttaagaatgatttcttattcagtggaacacttctgtttga 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35853874 attggatcattgaactccaaaagcaagggaggataaattaagccaaattgagccatgaagttaagaatgatttcttattcagtggaacacttctgtttga 35853973  T
Q  118 actaggcttgggatggatggctcaactcattcaaccctacccataatggtatttatttgaactagtatg--tttctgtcaaaaaacttttgatcgaagag 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  35853974 actaggcttgggatggatggctcaactcattcaaccctacccataatggtatttatttgaactagtatgtttttctgtcaaaaaacttttgatcgaagag 35854073  T
Q  216 ttcaagcaattttggctttaaagcatttttcaaatagcaaataaccataaacaaacatgaactaagatgaattatttcagtttattgctaacaagattat 315  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35854074 ttcaagcaattttggcttcaaagcatttttcaaatagcaaataaccataaacaaacatgaactaagatgaattatttcagtttattgctaacaagattat 35854173  T
Q  316 acatattccaagggaaaaagcaacatatcacagacagtacatagatcccaaca 368  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  35854174 acatattccaagggaaaaaacaacatatcacagacaatacatagatcccaaca 35854226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 371 - 600
Target Start/End: Original strand, 35866769 - 35866985
Alignment:
Q  371 agatatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaa 470  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  35866769 agatatgtaagagtattattgataaaccaataattaatgttgaattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaatagacaa 35866868  T
Q  471 gtattgtgaaacggagggagtatattatgagctgctaaataagaagttaattagcatggttaatcgcttgattaattgtcaaatgtacatgcatagaaca 570  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||             ||||||||||||||||||||||||||||||||||||||||||    
T  35866869 gtattgtgaaacggatggagtatattatgagctgccaaataagaa-------------gttaatcgcttgattaattgtcaaatgtacatgcatagaaca 35866955  T
Q  571 ctttgactagcctcttagttcaatgtacat 600  Q
    |||||||||||||||||||| |||||||||    
T  35866956 ctttgactagcctcttagtttaatgtacat 35866985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 18 - 316
Target Start/End: Original strand, 35858445 - 35858745
Alignment:
Q  18 attggatcattgaactccaaaagcaagggaggataaattaagccaaattgagccatgaagttaagaatgatttcttattcagtggaacacttctgtttga 117  Q
    ||||||||||||| ||||| |||| | |||||||||||||||  |||||||| ||||||||||||| |||||||| ||||||| ||| ||||| ||||||    
T  35858445 attggatcattgagctccacaagctacggaggataaattaagtaaaattgagtcatgaagttaagattgatttctaattcagttgaaaacttcagtttga 35858544  T
Q  118 actaggcttgggatggatggctcaactcattcaaccctacccataatggtatttatttgaactagtatg--tttctgtcaaaaaacttttgatcgaagag 215  Q
    | ||||| ||| |||||| | |||||||||||| ||| ||  | |||||||||||||||||||||||||  ||||||| ||||||||||  ||| |||||    
T  35858545 aataggcctggcatggatagttcaactcattcagcccaacagaaaatggtatttatttgaactagtatgtttttctgtgaaaaaactttcaatcaaagag 35858644  T
Q  216 ttcaagcaattttggctttaaagcatttttcaaatagcaaataaccataaacaaacatgaactaagatgaattatttcagtttattgctaacaagattat 315  Q
    ||||||||||||||| || ||||| ||||| ||||||||||||| || |||||||||||| || |||||||||||||||||||||||||| |||||||||    
T  35858645 ttcaagcaattttggattaaaagcgttttttaaatagcaaataatcagaaacaaacatgacctgagatgaattatttcagtttattgctatcaagattat 35858744  T
Q  316 a 316  Q
    |    
T  35858745 a 35858745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 377 - 493
Target Start/End: Original strand, 28562583 - 28562699
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 476  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||  | ||||||||    
T  28562583 gtaagagtaatattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaataattcttcaaaatggataagtattg 28562682  T
Q  477 tgaaacggagggagtat 493  Q
    ||| |||||||||||||    
T  28562683 tgagacggagggagtat 28562699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 377 - 492
Target Start/End: Original strand, 28568080 - 28568195
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 476  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  28568080 gtaagggtaatattgataaaccaataattaatgttgcattgaaacttcaaagtgacaagtaaaatgaaacaaaataattctccaaaatggacaagtattg 28568179  T
Q  477 tgaaacggagggagta 492  Q
    ||||| ||||||||||    
T  28568180 tgaaatggagggagta 28568195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 377 - 492
Target Start/End: Original strand, 28575673 - 28575788
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 476  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  28575673 gtaagggtaatattgataaaccaataattaatgttgcattgaaacttcaaagtgacaagtaaaatgaaacaaaataattctccaaaatggacaagtattg 28575772  T
Q  477 tgaaacggagggagta 492  Q
    ||||| ||||||||||    
T  28575773 tgaaatggagggagta 28575788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 373 - 493
Target Start/End: Original strand, 27035153 - 27035273
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||||||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||    
T  27035153 atatgtaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctccaaaatgaacaagt 27035252  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| ||||||||||| |||||    
T  27035253 attatgaaacggaggcagtat 27035273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 377 - 486
Target Start/End: Complemental strand, 26628931 - 26628822
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 476  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||  |||| ||||||    
T  26628931 gtaagggtattattgataaatcaataattaatgttgcattgaaacttgaaaatgacaaataaagtgaaacaaaattattctccaaaagcaacatgtattg 26628832  T
Q  477 tgaaacggag 486  Q
    ||||||||||    
T  26628831 tgaaacggag 26628822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 373 - 495
Target Start/End: Original strand, 36068238 - 36068360
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  36068238 atatgcaagggtattattgacaagtcaataattaatgttgcattgaaacttgaaagtgacaagtattttgaaacaaaattattctctaaaatggacaagt 36068337  T
Q  473 attgtgaaacggagggagtatat 495  Q
    ||| |||||||||||||||||||    
T  36068338 attatgaaacggagggagtatat 36068360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 373 - 493
Target Start/End: Original strand, 3585609 - 3585729
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||| ||||||    
T  3585609 atatgcaagggtattattgacaagtcaataattaatgttgcattgaaacttgaaagtgacaagtattttgaaacaaaattattctctaaaatagacaagt 3585708  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| ||||||||| |||||||    
T  3585709 attatgaaacggatggagtat 3585729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 11174342 - 11174222
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||  ||||| |||||||    
T  11174342 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctttaaaatgaacaagt 11174243  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| |||||||||||||||||    
T  11174242 attatgaaacggagggagtat 11174222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 11646444 - 11646324
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  11646444 atatgcaagggtattattgacaagtcaataattaatgttgcattgaaacttgaaagtgacaagtattttgaaacaaaattattctctaaaatggacaagt 11646345  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| |||||||||||||||||    
T  11646344 attatgaaacggagggagtat 11646324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 373 - 492
Target Start/End: Original strand, 7147071 - 7147190
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  7147071 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 7147170  T
Q  473 attgtgaaacggagggagta 492  Q
    ||| ||||||||||||||||    
T  7147171 attatgaaacggagggagta 7147190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 373 - 492
Target Start/End: Complemental strand, 40058422 - 40058303
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  40058422 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 40058323  T
Q  473 attgtgaaacggagggagta 492  Q
    ||| ||||||||||||||||    
T  40058322 attatgaaacggagggagta 40058303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 373 - 492
Target Start/End: Complemental strand, 40918850 - 40918731
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  40918850 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 40918751  T
Q  473 attgtgaaacggagggagta 492  Q
    ||| ||||||||||||||||    
T  40918750 attatgaaacggagggagta 40918731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 30999643 - 30999523
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  |||||||||||||||||||||||||||||||| |||||||   |||||||||||||||||| |||||  ||||||    
T  30999643 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtaacaagtattgtgaaacaaaattattctctaaaatggacaagt 30999544  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| |||||||||||||||||    
T  30999543 attatgaaacggagggagtat 30999523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 43275518 - 43275398
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||   |||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  43275518 atatgcaagggtattattgacaagataataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 43275419  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| |||||||||||||||||    
T  43275418 attatgaaacggagggagtat 43275398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 2540049 - 2539929
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||  |||||  ||||||    
T  2540049 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctttaaaatggacaagt 2539950  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| ||||||||| |||||||    
T  2539949 attatgaaacggaaggagtat 2539929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 377 - 481
Target Start/End: Complemental strand, 27563982 - 27563878
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 476  Q
    ||||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||   |||||||| |    
T  27563982 gtaagggtattattgacaagtcaataattaatgttgcattgaaacttgaaagtgacaagtaatatgaaacaaaattgttctccaaaagcgacaagtatcg 27563883  T
Q  477 tgaaa 481  Q
    |||||    
T  27563882 tgaaa 27563878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 373 - 492
Target Start/End: Original strand, 37345729 - 37345848
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  |||||||||||||||||||||||||||||| |||||||||   |||||||||||||||||| |||||  ||||||    
T  37345729 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaaatgacaagtattgtgaaacaaaattattctctaaaatggacaagt 37345828  T
Q  473 attgtgaaacggagggagta 492  Q
    ||| ||||||||| ||||||    
T  37345829 attatgaaacggaaggagta 37345848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 377 - 492
Target Start/End: Complemental strand, 45400885 - 45400770
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 476  Q
    |||||| |||||||||||||  |||||||||||||||||||||| || |||||||||| |||| |||||||||||||||||||||||   ||  |||||     
T  45400885 gtaagaatattattgataaattaataattaatgttgcattgaaatttaaaagtgacaaataaagtgaaacaaaattattctccaaaaacgacttgtatta 45400786  T
Q  477 tgaaacggagggagta 492  Q
    ||||||||||||||||    
T  45400785 tgaaacggagggagta 45400770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 20546412 - 20546310
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||||||| |||||||||| ||  |||||||||||||||||||||||| |||||||||||||||   ||||||||||||||||| ||||||  ||||||    
T  20546412 atatgtaagggtattattgacaagacaataattaatgttgcattgaaacctgaaagtgacaagtattgtgaaacaaaattattcttcaaaatggacaagt 20546313  T
Q  473 att 475  Q
    |||    
T  20546312 att 20546310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 377 - 463
Target Start/End: Complemental strand, 13881070 - 13880984
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    |||||| ||||||| | ||| ||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||| ||||||    
T  13881070 gtaagattattattaacaaatcaataattaatattgcattgaaacttgaaagtgacaagtaatttgaaacaaaattattcaccaaaa 13880984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 377 - 479
Target Start/End: Complemental strand, 10180983 - 10180881
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 476  Q
    ||||| |||||||||| |||   |||| ||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||   | ||||||||    
T  10180983 gtaagggtattattgacaaattcataactaatgttgcattgaaacttgaaagtgacaagtaatgtgaaacaaaattgttctccaaaagtgataagtattg 10180884  T
Q  477 tga 479  Q
    |||    
T  10180883 tga 10180881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 457
Target Start/End: Original strand, 37510457 - 37510512
Alignment:
Q  402 aattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattct 457  Q
    ||||||| || ||||||||||| ||||||| |||||||||||||||||||||||||    
T  37510457 aattaattttacattgaaacttaaaagtgataagtaaaatgaaacaaaattattct 37510512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 252 - 301
Target Start/End: Complemental strand, 35727545 - 35727496
Alignment:
Q  252 gcaaataaccataaacaaacatgaactaagatgaattatttcagtttatt 301  Q
    |||||||| || || |||||||||||||||||||| ||||||||||||||    
T  35727545 gcaaataatcaaaaccaaacatgaactaagatgaaatatttcagtttatt 35727496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 167632 - 167708
Alignment:
Q  387 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    ||||| |||| ||| | ||||||||||||||||  ||||||||||||  |||| | |||||||||| ||||||||||    
T  167632 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaattaaaacaaaatttttctccaaaa 167708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 463
Target Start/End: Complemental strand, 13327847 - 13327788
Alignment:
Q  404 ttaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    ||||||||||||||||  ||||||||||||  ||||  ||||||||||| ||||||||||    
T  13327847 ttaatgttgcattgaactttgaaagtgacagttaaatagaaacaaaatttttctccaaaa 13327788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 233
Target Start/End: Complemental strand, 35748330 - 35748233
Alignment:
Q  139 tcaactcattcaaccctacccataatggtatttatttgaactagta---tgtttctgtcaaaaaacttttgatcgaagagttcaagcaattttggctt 233  Q
    ||||||||||||||| ||| || |||||||||  ||||||||||||   | ||||| | ||||||||| | ||| || ||||| ||||||||||||||    
T  35748330 tcaactcattcaaccttacacaaaatggtattggtttgaactagtatattttttctattaaaaaacttctaatcaaatagttctagcaattttggctt 35748233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 35727785 - 35727703
Alignment:
Q  18 attggatcattgaactccaaaagcaagggaggataaattaagccaaattgagccatgaagttaagaatgatttcttattcagt 100  Q
    ||||| |||||||  ||||||||  |||||   |||||||||||||||||  ||||| | |||||| ||||||||||||||||    
T  35727785 attggctcattgagttccaaaagtcagggaacttaaattaagccaaattggaccatgcaattaagactgatttcttattcagt 35727703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 440
Target Start/End: Complemental strand, 33751289 - 33751233
Alignment:
Q  383 gtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaa 440  Q
    |||||||||||||| ||||||||||| ||||||||||  |||||| ||| ||||||||    
T  33751289 gtattattgataaaacaataattaatattgcattgaactttgaaaatga-aagtaaaa 33751233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 11993978 - 11993902
Alignment:
Q  387 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    ||||| |||| ||| | ||||||||||||| ||  ||||||||||||  ||||  ||||||||||| ||||||||||    
T  11993978 tattggtaaaacaacatttaatgttgcattaaactttgaaagtgacagttaaatagaaacaaaatttttctccaaaa 11993902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 9e-47; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 377 - 492
Target Start/End: Complemental strand, 734454 - 734339
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 476  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||    
T  734454 gtaagagtattattgataaaccaataattaatgttgtattgaaacttgaaagtgacaagtaaagtgaaacaaaattattctccaaaatggacaagtattg 734355  T
Q  477 tgaaacggagggagta 492  Q
    |||||||| |||||||    
T  734354 tgaaacggtgggagta 734339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 373 - 492
Target Start/End: Complemental strand, 25683348 - 25683229
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||  ||||||    
T  25683348 atatgtaagggtattattgacaaaacaataattaatgttgcattgaaacttgaaagtgacaagttttatgaaacaaaattattctccaaaatggacaagt 25683249  T
Q  473 attgtgaaacggagggagta 492  Q
    ||| ||||||||||||||||    
T  25683248 attatgaaacggagggagta 25683229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 385 - 486
Target Start/End: Original strand, 39071052 - 39071153
Alignment:
Q  385 attattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacgg 484  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||||||| |||    
T  39071052 attattgataaaccaataattaatgttgcattgatacttaaaagtgacaagtaaagtgaaacaaaattattctcaaaaatagacaagtattgtgaatcgg 39071151  T
Q  485 ag 486  Q
    ||    
T  39071152 ag 39071153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 37900742 - 37900622
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||| ||||||    
T  37900742 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtatcgtgaaacaaaattattcttcaaaatagacaagt 37900643  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| ||||||||| |||||||    
T  37900642 attatgaaacggaaggagtat 37900622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 383 - 494
Target Start/End: Complemental strand, 10285167 - 10285056
Alignment:
Q  383 gtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaac 482  Q
    |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||  |||||| ||||||||| ||||||    
T  10285167 gtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctttaaaatagacaagtattatgaaac 10285068  T
Q  483 ggagggagtata 494  Q
    ||||||||||||    
T  10285067 ggagggagtata 10285056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 373 - 496
Target Start/End: Complemental strand, 30720611 - 30720488
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  |||||| |||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  30720611 atatgcaagggtattattgacaagacaataactaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 30720512  T
Q  473 attgtgaaacggagggagtatatt 496  Q
    ||| ||||||||||||||||||||    
T  30720511 attatgaaacggagggagtatatt 30720488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 373 - 492
Target Start/End: Complemental strand, 40886729 - 40886610
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  40886729 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 40886630  T
Q  473 attgtgaaacggagggagta 492  Q
    ||| ||||||||||||||||    
T  40886629 attatgaaacggagggagta 40886610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 377 - 485
Target Start/End: Original strand, 11319718 - 11319826
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 476  Q
    |||||||||||||| ||||||||||||||||| ||||||| |||| ||||||||| || |||| |||||||||||||||||| |||||| |||||||||     
T  11319718 gtaagagtattattaataaaccaataattaatattgcattaaaacctgaaagtgataaataaagtgaaacaaaattattctctaaaatagacaagtatta 11319817  T
Q  477 tgaaacgga 485  Q
    |||||||||    
T  11319818 tgaaacgga 11319826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 12806972 - 12806852
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||| ||||||||   |||||||||||||||||| |||||  ||||||    
T  12806972 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagagacaagtattgtgaaacaaaattattctctaaaatggacaagt 12806873  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| |||||||||||||||||    
T  12806872 attatgaaacggagggagtat 12806852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 378 - 493
Target Start/End: Complemental strand, 1056737 - 1056624
Alignment:
Q  378 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgt 477  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||||  ||| || ||||| |||||||||||||||||   |||||||||||    
T  1056737 taagagtattattgacaaactaataattaatgttgcattgaaacttgaaagtga-tagt-aattgaaataaaattattctccaaaagtgacaagtattgt 1056640  T
Q  478 gaaacggagggagtat 493  Q
    ||||||||||||||||    
T  1056639 gaaacggagggagtat 1056624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 373 - 492
Target Start/End: Complemental strand, 36561218 - 36561099
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||| ||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  36561218 atatgcaagggtattattgacaagacaatacttaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 36561119  T
Q  473 attgtgaaacggagggagta 492  Q
    ||| ||||||||||||||||    
T  36561118 attatgaaacggagggagta 36561099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 377 - 458
Target Start/End: Complemental strand, 11795398 - 11795317
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctc 458  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||    
T  11795398 gtaagagtattattgataaacctataattaatgttgcattgaaacttgaaagtgataaataaagtgaaacaaaattattctc 11795317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 373 - 494
Target Start/End: Complemental strand, 23097843 - 23097722
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||||||| |||||||||| ||  ||||||||||| |||||||||||| ||||||| |||||||   ||||||||||||||||||||||||  ||||||    
T  23097843 atatgtaagggtattattgacaagacaataattaatattgcattgaaacatgaaagtaacaagtattgtgaaacaaaattattctccaaaatggacaagt 23097744  T
Q  473 attgtgaaacggagggagtata 494  Q
    ||| ||||||||| ||||||||    
T  23097743 attatgaaacggaaggagtata 23097722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 371 - 490
Target Start/End: Original strand, 16983413 - 16983532
Alignment:
Q  371 agatatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaa 470  Q
    ||||||| ||| |||||||||| ||  |||||||||||||||||||||||||| |||||||||||||   ||||||||||||||||| ||||||| ||||    
T  16983413 agatatgcaagggtattattgaaaagacaataattaatgttgcattgaaacttaaaagtgacaagtattgtgaaacaaaattattcttcaaaatagacaa 16983512  T
Q  471 gtattgtgaaacggagggag 490  Q
    ||||| | |||| |||||||    
T  16983513 gtattataaaacagagggag 16983532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 373 - 493
Target Start/End: Original strand, 25773807 - 25773927
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  |||||||||||||||||||||||||||||||||| |||||   ||||||||| |||||||| |||||  ||||||    
T  25773807 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgataagtattgtgaaacaaacttattctctaaaatggacaagt 25773906  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| |||||||||| ||||||    
T  25773907 attatgaaacggagagagtat 25773927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 378 - 463
Target Start/End: Original strand, 16054274 - 16054359
Alignment:
Q  378 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    |||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||  ||| |||| ||||||||||||||||||    
T  16054274 taagggtattattgacaaactaataattaatgttgcattgaaacttgaaagtgacaaccaaagtgaaccaaaattattctccaaaa 16054359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 378 - 463
Target Start/End: Complemental strand, 30403076 - 30402991
Alignment:
Q  378 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    |||| |||||||||| ||||||||||||||| ||| |||||||||| ||||||||||||||||||||| |||||||||||| ||||    
T  30403076 taagggtattattgacaaaccaataattaattttgtattgaaacttaaaagtgacaagtaaaatgaaataaaattattctctaaaa 30402991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 383 - 492
Target Start/End: Original strand, 26168076 - 26168185
Alignment:
Q  383 gtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaac 482  Q
    |||||||| | |||| ||| |||||| ||||||||||||||||||||||||| |||| |||||||||||||||||| ||||   ||| |||| |||||||    
T  26168076 gtattattaacaaacaaatcattaatcttgcattgaaacttgaaagtgacaattaaagtgaaacaaaattattctctaaaaacgacatgtatcgtgaaac 26168175  T
Q  483 ggagggagta 492  Q
    ||| ||||||    
T  26168176 ggaaggagta 26168185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 492
Target Start/End: Complemental strand, 1055885 - 1055773
Alignment:
Q  384 tattattgataaaccaataattaatgttgcattgaaacttgaaag----tgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtga 479  Q
    ||||||| | ||||||||| |||||||||||||||||||||| ||     |||||||||| |||| |||| |||||||||||||   |||| ||||| ||    
T  1055885 tattattaacaaaccaatatttaatgttgcattgaaacttgagagagacagacaagtaaagtgaagcaaatttattctccaaaaacgacaaatattggga 1055786  T
Q  480 aacggagggagta 492  Q
    |||||| ||||||    
T  1055785 aacggaaggagta 1055773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 449
Target Start/End: Original strand, 21638931 - 21639003
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaa 449  Q
    ||||||| |||||||| ||||||||| ||||||||||||| |||||| || ||||||||| || || ||||||    
T  21638931 gtaagagaattattgacaaaccaatatttaatgttgcatttaaacttaaatgtgacaagtcaagtggaacaaa 21639003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 455
Target Start/End: Original strand, 15629310 - 15629376
Alignment:
Q  389 ttgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattatt 455  Q
    ||||||||  ||||||||||| |||||||||| || ||| | ||||||||| |||||||||||||||    
T  15629310 ttgataaattaataattaatgctgcattgaaatttaaaaataacaagtaaagtgaaacaaaattatt 15629376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 383 - 439
Target Start/End: Original strand, 11797714 - 11797770
Alignment:
Q  383 gtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaa 439  Q
    |||| ||||| |||| |||||||||||||| ||||||| |||||| |||||||||||    
T  11797714 gtatcattgacaaactaataattaatgttgtattgaaatttgaaaatgacaagtaaa 11797770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 454 - 494
Target Start/End: Complemental strand, 39070921 - 39070881
Alignment:
Q  454 ttctccaaaataaacaagtattgtgaaacggagggagtata 494  Q
    |||| |||||| |||||||||||||||||||||||||||||    
T  39070921 ttcttcaaaatgaacaagtattgtgaaacggagggagtata 39070881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 463
Target Start/End: Complemental strand, 42174322 - 42174263
Alignment:
Q  404 ttaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    ||||| |||||||||||  | ||||||||| ||||| ||||||||||||||||| |||||    
T  42174322 ttaatattgcattgaaatataaaagtgacaggtaaattgaaacaaaattattcttcaaaa 42174263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 463
Target Start/End: Original strand, 12723097 - 12723187
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    |||| |||| ||| ||||| |||| ||| ||||| ||||||||||||  || |||||||||| ||||  | ||||||||| ||||||||||    
T  12723097 atatataagggtaatattggtaaaacaacaattagtgttgcattgaactttaaaagtgacaattaaataggaacaaaatttttctccaaaa 12723187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 463
Target Start/End: Original strand, 12784580 - 12784670
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    |||| |||| ||| ||||| |||| ||| ||||| ||||||||||||  ||||||||||||  ||||  | ||||||||| ||||||||||    
T  12784580 atatataagggtaatattggtaaaacaacaattagtgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaa 12784670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 447 - 493
Target Start/End: Original strand, 21639770 - 21639816
Alignment:
Q  447 aaaattattctccaaaataaacaagtattgtgaaacggagggagtat 493  Q
    |||||||||||||||||  |||||||||||||||| |||||| ||||    
T  21639770 aaaattattctccaaaagcaacaagtattgtgaaatggagggggtat 21639816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 463
Target Start/End: Complemental strand, 31802864 - 31802780
Alignment:
Q  378 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    |||| ||| ||||| |||| ||| | ||||||||||||||||  |||||| |||||  |||| |||||||||||| ||||||||||    
T  31802864 taagggtaatattggtaaaacaacatttaatgttgcattgaactttgaaaatgacagttaaattgaaacaaaatt-ttctccaaaa 31802780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 1297890 - 1297966
Alignment:
Q  387 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    ||||| |||| ||||| ||||||||||||||||  ||||||||||||  ||||  | ||||||| | ||||||||||    
T  1297890 tattggtaaaacaatatttaatgttgcattgaattttgaaagtgacagttaaataggaacaaaaattttctccaaaa 1297966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 4175632 - 4175708
Alignment:
Q  387 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    |||||||||| ||| | ||||||||||||||||  ||||||||||||  ||||  | ||||||| | ||||||||||    
T  4175632 tattgataaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaattttctccaaaa 4175708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 378 - 450
Target Start/End: Original strand, 4985318 - 4985390
Alignment:
Q  378 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaa 450  Q
    |||| ||| |||||||||| || || ||||||||||||||||  ||||||||||||  ||||  |||||||||    
T  4985318 taagggtaatattgataaaacattatttaatgttgcattgaactttgaaagtgacagttaaatagaaacaaaa 4985390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 445
Target Start/End: Complemental strand, 7408408 - 7408340
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaa 445  Q
    ||||||||| ||||| |||| ||||| ||||| |||| |||||  ||||||||||||| |||| |||||    
T  7408408 gtaagagtaatattggtaaaacaatatttaatattgctttgaactttgaaagtgacaattaaattgaaa 7408340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 9076138 - 9076062
Alignment:
Q  387 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    |||||||||| ||| | ||||||||||||||||  ||||||||||||  ||||  | ||||||||| || |||||||    
T  9076138 tattgataaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttatccaaaa 9076062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 42911617 - 42911541
Alignment:
Q  387 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    ||||| |||| ||||| ||||||||||||||||  ||||||||||||  ||||  | ||||||| | ||||||||||    
T  42911617 tattggtaaaacaatatttaatgttgcattgaactttgaaagtgacagttaaatagtaacaaaaattttctccaaaa 42911541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 2e-44; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 377 - 492
Target Start/End: Complemental strand, 18355983 - 18355868
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 476  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||    
T  18355983 gtaagggtattattgataaatcaataattaatgttgcattgaaacttgaaagtgacaagtaaagtgaaacaaaattattcttcaaaatggacaagtattg 18355884  T
Q  477 tgaaacggagggagta 492  Q
    ||||||||||||||||    
T  18355883 tgaaacggagggagta 18355868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 377 - 481
Target Start/End: Original strand, 54086714 - 54086818
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 476  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||  ||||||||||    
T  54086714 gtaagggtattattgataaatcaataattaatgttgtattgaaacttgaaagtgacaaataaaatgaaacaaaagtattctccaaaatggacaagtattg 54086813  T
Q  477 tgaaa 481  Q
    |||||    
T  54086814 tgaaa 54086818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 384 - 495
Target Start/End: Original strand, 6901730 - 6901840
Alignment:
Q  384 tattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacg 483  Q
    ||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||  |||| ||||||||||||    
T  6901730 tattattgataaatcaatgattaatgttgcattgaaacttaaaagtgacaagtaaagtgaaacaaaattattctccaaaatggacaa-tattgtgaaacg 6901828  T
Q  484 gagggagtatat 495  Q
    ||| || |||||    
T  6901829 gagcgactatat 6901840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 373 - 492
Target Start/End: Original strand, 13365001 - 13365120
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  13365001 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattttgaaacaaaattattctctaaaatggacaagt 13365100  T
Q  473 attgtgaaacggagggagta 492  Q
    ||| ||||||||||||||||    
T  13365101 attatgaaacggagggagta 13365120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 373 - 492
Target Start/End: Complemental strand, 46694229 - 46694110
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  46694229 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 46694130  T
Q  473 attgtgaaacggagggagta 492  Q
    ||| ||||||||||||||||    
T  46694129 attatgaaacggagggagta 46694110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 385 - 495
Target Start/End: Original strand, 29375302 - 29375412
Alignment:
Q  385 attattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacgg 484  Q
    |||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||||| ||||||||    
T  29375302 attattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacgg 29375401  T
Q  485 agggagtatat 495  Q
    |||||||||||    
T  29375402 agggagtatat 29375412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 383 - 495
Target Start/End: Complemental strand, 19241777 - 19241665
Alignment:
Q  383 gtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaac 482  Q
    |||||||||| ||  |||||||||||||||||||||||||| |||||||||||||   |||||||||||||||||| |||||  ||||||||| ||||||    
T  19241777 gtattattgacaagtcaataattaatgttgcattgaaacttaaaagtgacaagtattttgaaacaaaattattctctaaaatggacaagtattatgaaac 19241678  T
Q  483 ggagggagtatat 495  Q
    |||||||||||||    
T  19241677 ggagggagtatat 19241665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 373 - 493
Target Start/End: Original strand, 36881438 - 36881558
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||| ||||||||   |||||||||||||||||| |||||  ||||||    
T  36881438 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagggacaagtattgtgaaacaaaattattctctaaaatggacaagt 36881537  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| |||||||||||||||||    
T  36881538 attatgaaacggagggagtat 36881558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 23088050 - 23087930
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||  |||||  ||||||    
T  23088050 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctttaaaatcgacaagt 23087951  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| ||||||||||| |||||    
T  23087950 attatgaaacggaggaagtat 23087930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 373 - 492
Target Start/End: Original strand, 3383234 - 3383353
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| |||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  3383234 atatgcaagagtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 3383333  T
Q  473 attgtgaaacggagggagta 492  Q
    ||| | ||||| | ||||||    
T  3383334 attataaaacgaaaggagta 3383353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 384 - 483
Target Start/End: Original strand, 24064389 - 24064488
Alignment:
Q  384 tattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacg 483  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||| ||||| ||||| |||||||||||||||||   ||| |||||||||||||    
T  24064389 tattattgataaaccaataattaatgttacattaaaacttgaaagtgacatgtaaagtgaaataaaattattctccaaaaacgacatgtattgtgaaacg 24064488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 407 - 494
Target Start/End: Original strand, 26783661 - 26783748
Alignment:
Q  407 atgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacggagggagtata 494  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||| ||||||||||| ||||||||| ||||||    
T  26783661 atgttgcattgaaacttgaaagtgacaagtaaagtgaaacaaaattattctttaaaatagacaagtattgtaaaacggaggaagtata 26783748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 373 - 492
Target Start/End: Complemental strand, 32835108 - 32834989
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    |||| |||| |||||||||| ||| ||||| |||||||||||||||||||||||| |||||||||  ||||||| ||||||||||| | |||  ||||||    
T  32835108 atatttaagggtattattgacaaaacaatacttaatgttgcattgaaacttgaaaatgacaagtactatgaaacgaaattattctctacaatggacaagt 32835009  T
Q  473 attgtgaaacggagggagta 492  Q
    ||| ||||||||||||||||    
T  32835008 attatgaaacggagggagta 32834989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 378 - 481
Target Start/End: Original strand, 48436387 - 48436490
Alignment:
Q  378 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgt 477  Q
    |||| |||||||||| || | ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||   |||| ||||||    
T  48436387 taagtgtattattgacaagctaataattaatgttgcattgaaacttgaaagtgacaagtaatgtgaaacaaaattattctccaaaagtgacaaatattgt 48436486  T
Q  478 gaaa 481  Q
    ||||    
T  48436487 gaaa 48436490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 383 - 493
Target Start/End: Original strand, 48820508 - 48820618
Alignment:
Q  383 gtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaac 482  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||||||| |  |||||  ||||||||| ||||||    
T  48820508 gtattattgacaaaacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattttttaaaatggacaagtattatgaaac 48820607  T
Q  483 ggagggagtat 493  Q
    ||||| |||||    
T  48820608 ggaggaagtat 48820618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 373 - 494
Target Start/End: Original strand, 13703370 - 13703491
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   | ||||||| ||||||| || |||  ||||||    
T  13703370 atatgcaagggtattattgacaacacaataattaatgttgcattgaaacttgaaagtgacaagtattgtaaaacaaatttattcttcagaatggacaagt 13703469  T
Q  473 attgtgaaacggagggagtata 494  Q
    ||| ||||||||| ||||||||    
T  13703470 attatgaaacggatggagtata 13703491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 373 - 492
Target Start/End: Original strand, 199013 - 199132
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||| |||||||||||||||||||||||||||||| |||||| ||   ||||||||||||||| || |||||  |||| |    
T  199013 atatgcaagggtattattgacaaaacaataattaatgttgcattgaaacttgaaaatgacaaatattgtgaaacaaaattattttctaaaatggacaact 199112  T
Q  473 attgtgaaacggagggagta 492  Q
    ||| ||||| ||||||||||    
T  199113 attatgaaatggagggagta 199132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 377 - 463
Target Start/End: Complemental strand, 52805142 - 52805057
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    ||||| || ||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||    
T  52805142 gtaagggtgttattgataaatcaataataaatgttgcatcgaaacttgaaagtgacaagtaaaataaaac-aaattattctccaaaa 52805057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 377 - 455
Target Start/End: Complemental strand, 53559726 - 53559648
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattatt 455  Q
    |||| ||||||||| ||||| |||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  53559726 gtaacagtattattaataaatcaatgattaatgttgcattgaaacttgagagtgacaagtaaattgaaacaaaattatt 53559648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 43750294 - 43750396
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| |||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||    ||||| ||||||||||  |||||  ||||||    
T  43750294 atatgcaagagtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgagaaaccaaattattctaaaaaatggacaagt 43750393  T
Q  473 att 475  Q
    |||    
T  43750394 att 43750396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 386 - 457
Target Start/End: Complemental strand, 1455257 - 1455186
Alignment:
Q  386 ttattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattct 457  Q
    ||||||| ||||||||||||||||||||||||||| | |||||||||||||||| | ||||||| |||||||    
T  1455257 ttattgacaaaccaataattaatgttgcattgaaattggaaagtgacaagtaaagtaaaacaaatttattct 1455186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 384 - 487
Target Start/End: Complemental strand, 19897038 - 19896935
Alignment:
Q  384 tattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacg 483  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||  | |||| || | ||||||||||||| | |||||  |||| |||| ||||||||    
T  19897038 tattattgataaaccaataattaatgttgtattaaaacttgaaagaaagaagtgaagtaaaacaaaattatttttcaaaagcaacatgtatggtgaaacg 19896939  T
Q  484 gagg 487  Q
    ||||    
T  19896938 gagg 19896935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 402 - 451
Target Start/End: Original strand, 37293595 - 37293644
Alignment:
Q  402 aattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaat 451  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37293595 aattaatgttgcattgaaacttgaaagggacaagtaaaatgaaacaaaat 37293644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 384 - 485
Target Start/End: Complemental strand, 52009158 - 52009051
Alignment:
Q  384 tattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatg------aaacaaaattattctccaaaataaacaagtattgt 477  Q
    ||||||||| ||  |||||||||||||||||| |||||||||||||||||||||| |||      |||||||||||||  ||||||   |||||||||||    
T  52009158 tattattgacaagacaataattaatgttgcatcgaaacttgaaagtgacaagtaatatgattattaaacaaaattatttcccaaaagcgacaagtattgt 52009059  T
Q  478 gaaacgga 485  Q
    ||||||||    
T  52009058 gaaacgga 52009051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 398 - 464
Target Start/End: Complemental strand, 31873957 - 31873891
Alignment:
Q  398 caataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaat 464  Q
    ||||||||||||||||||||||||||||||| ||||||||   ||||| |||||||||||| |||||    
T  31873957 caataattaatgttgcattgaaacttgaaagggacaagtattgtgaaataaaattattctctaaaat 31873891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 384 - 486
Target Start/End: Original strand, 48963288 - 48963390
Alignment:
Q  384 tattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacg 483  Q
    ||||||||| ||  |||||||||||||||||||||||||| ||| ||| || ||  |||||| |||||||||||| |||||| | ||||| | |||| ||    
T  48963288 tattattgacaagacaataattaatgttgcattgaaacttaaaaatgataaatattatgaaataaaattattctctaaaatagataagtaatatgaatcg 48963387  T
Q  484 gag 486  Q
    |||    
T  48963388 gag 48963390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 378 - 463
Target Start/End: Complemental strand, 48152079 - 48151994
Alignment:
Q  378 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    |||| ||| ||||| |||| ||| | ||||||||||||||||  ||||||||||||  |||| ||||||||| || ||||||||||    
T  48152079 taagggtaatattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaattgaaacaaattttttctccaaaa 48151994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 378 - 463
Target Start/End: Complemental strand, 48214161 - 48214076
Alignment:
Q  378 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    |||| ||| ||||| |||| ||| | ||||||||||||||||  ||||||||||||  |||| ||||||||| || ||||||||||    
T  48214161 taagggtaatattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaattgaaacaaattttttctccaaaa 48214076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 399 - 463
Target Start/End: Original strand, 17755357 - 17755421
Alignment:
Q  399 aataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    |||||||| | ||||||||||||||  || | ||||||||||| ||| |||||||||||||||||    
T  17755357 aataattattattgcattgaaactttgaaataacaagtaaaataaaataaaattattctccaaaa 17755421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 399 - 463
Target Start/End: Original strand, 19056677 - 19056741
Alignment:
Q  399 aataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    |||||||| | ||||||||||||||  || | ||||||||||| ||| |||||||||||||||||    
T  19056677 aataattattattgcattgaaactttgaaataacaagtaaaataaaataaaattattctccaaaa 19056741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 431
Target Start/End: Original strand, 37781094 - 37781152
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtga 431  Q
    |||| |||| |||||||||| ||||||||||||||  ||| ||||||| ||||||||||    
T  37781094 atatttaagggtattattgacaaaccaataattaactttggattgaaatttgaaagtga 37781152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 495
Target Start/End: Complemental strand, 13364881 - 13364840
Alignment:
Q  454 ttctccaaaataaacaagtattgtgaaacggagggagtatat 495  Q
    ||||||||||| |||| ||||| |||||||||||||||||||    
T  13364881 ttctccaaaatgaacatgtattttgaaacggagggagtatat 13364840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 463
Target Start/End: Complemental strand, 32980734 - 32980649
Alignment:
Q  378 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    |||| ||| |||||||||| || || ||||||||| ||||||  ||||||||||||  ||||  |||||||||  |||||||||||    
T  32980734 taagggtaatattgataaaacattatttaatgttgtattgaattttgaaagtgacagttaaatagaaacaaaaaaattctccaaaa 32980649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 373 - 433
Target Start/End: Original strand, 2154186 - 2154246
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgaca 433  Q
    |||| |||||||| |||||||||  ||| | ||||||||||||||||  ||||||||||||    
T  2154186 atatctaagagtaatattgataagacaacatttaatgttgcattgaactttgaaagtgaca 2154246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 34266599 - 34266675
Alignment:
Q  387 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    |||||||||| ||| | ||||||||||||||||  |||||| |||||  ||||  ||||||||| | ||||||||||    
T  34266599 tattgataaaacaacatttaatgttgcattgaactttgaaaatgacagttaaatagaaacaaaaattttctccaaaa 34266675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 373 - 433
Target Start/End: Original strand, 43159907 - 43159967
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgaca 433  Q
    |||| |||| ||| |||||||||| ||| | ||||||||||||||||  ||||||||||||    
T  43159907 atatttaagggtaatattgataaatcaacatttaatgttgcattgaattttgaaagtgaca 43159967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 9e-44; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 378 - 492
Target Start/End: Complemental strand, 40757025 - 40756911
Alignment:
Q  378 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgt 477  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||  ||||||||| |    
T  40757025 taagggtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaactaaagtgaaacaaaattattctccaaaatggacaagtattat 40756926  T
Q  478 gaaacggagggagta 492  Q
    |||||||||||||||    
T  40756925 gaaacggagggagta 40756911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 373 - 495
Target Start/End: Complemental strand, 22388257 - 22388135
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  22388257 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 22388158  T
Q  473 attgtgaaacggagggagtatat 495  Q
    ||| |||||||||||||||||||    
T  22388157 attatgaaacggagggagtatat 22388135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 384 - 463
Target Start/End: Original strand, 19976497 - 19976576
Alignment:
Q  384 tattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19976497 tattattgataaactaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattttccaaaa 19976576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 377 - 486
Target Start/End: Complemental strand, 37284632 - 37284525
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 476  Q
    |||||||||||| ||||||| ||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| | | ||||||||    
T  37284632 gtaagagtattagtgataaatcaataat-aatgttgcattgaaacttgaaaatgacaagtaaagtgaaacaaaattattctccaaaagaga-aagtattg 37284535  T
Q  477 tgaaacggag 486  Q
    ||||||||||    
T  37284534 tgaaacggag 37284525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 373 - 493
Target Start/End: Original strand, 23366947 - 23367067
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  23366947 atatgcaagggtattattgacaagacaataattaatgttgtattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 23367046  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| |||||||||||||||||    
T  23367047 attatgaaacggagggagtat 23367067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 28110214 - 28110094
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||  || ||||||||||   | || |    
T  28110214 atatgtaagggtattattgataaaccaataattaatgttgcattgaaacttgaaaatgacaagtaatgtgaaacaagttttttctccaaaaacgataaat 28110115  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||||||||||||||| |||||    
T  28110114 attgtgaaacggaggaagtat 28110094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 386 - 493
Target Start/End: Complemental strand, 32839035 - 32838928
Alignment:
Q  386 ttattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacgga 485  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||   ||| |||||||||| | ||    
T  32839035 ttattgataaacaaataattaatattgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattcttcaaaaacgacatgtattgtgaagcaga 32838936  T
Q  486 gggagtat 493  Q
     |||||||    
T  32838935 tggagtat 32838928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 373 - 493
Target Start/End: Original strand, 3519065 - 3519185
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  |||||||||||||| |||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  3519065 atatgcaagggtattattgacaagacaataattaatgttacattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 3519164  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| ||||||||||| |||||    
T  3519165 attatgaaacggaggaagtat 3519185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 377 - 489
Target Start/End: Original strand, 36447420 - 36447532
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 476  Q
    ||||| |||||||||||||||||||||||||  ||||||||||| ||||||||||| | |||| |||||||||||||||||| ||||   ||| ||||||    
T  36447420 gtaagtgtattattgataaaccaataattaacattgcattgaaatttgaaagtgacgaataaagtgaaacaaaattattctctaaaagcgacatgtattg 36447519  T
Q  477 tgaaacggaggga 489  Q
    |||||||||||||    
T  36447520 tgaaacggaggga 36447532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 373 - 492
Target Start/End: Complemental strand, 12969859 - 12969740
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    |||| |||| |||||||||| ||  ||||||||||| ||||||||||||||||||| |||| |||   ||||||||||||||||||||||||  ||||||    
T  12969859 atatttaagggtattattgagaagacaataattaatattgcattgaaacttgaaagagacatgtattgtgaaacaaaattattctccaaaatggacaagt 12969760  T
Q  473 attgtgaaacggagggagta 492  Q
    ||| ||||||||||||||||    
T  12969759 attatgaaacggagggagta 12969740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 377 - 492
Target Start/End: Complemental strand, 39562005 - 39561895
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 476  Q
    ||||| |||||||||| ||||||||||||||||||||||||||| || |||||||||||     |||||||||||||||||||||||   ||| ||||||    
T  39562005 gtaagggtattattgacaaaccaataattaatgttgcattgaaatttaaaagtgacaag-----tgaaacaaaattattctccaaaaacgacatgtattg 39561911  T
Q  477 tgaaacggagggagta 492  Q
    ||||||||||||||||    
T  39561910 tgaaacggagggagta 39561895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 373 - 493
Target Start/End: Original strand, 1102659 - 1102779
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| || ||||||| ||  ||||||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||  ||||  ||||||    
T  1102659 atatgcaagggtgttattgacaagacaataattaatgttgcattgaaacttgaaagtgacgagtattgtgaaacaaaattattctctcaaatggacaagt 1102758  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| |||||||||||||||||    
T  1102759 attatgaaacggagggagtat 1102779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 373 - 493
Target Start/End: Original strand, 39938328 - 39938448
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||| |||||| |||||||||||||   |||||||||||||||||| |||||  ||||||    
T  39938328 atatgcaagggtattattgacaagacaataattaatgttgcattaaaacttaaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 39938427  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| | |||||||||||||||    
T  39938428 attataaaacggagggagtat 39938448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 373 - 492
Target Start/End: Complemental strand, 37673862 - 37673743
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||| ||||||||||||   ||||||||| |||||||| |||||  ||||||    
T  37673862 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttggaagtgacaagtattttgaaacaaagttattctctaaaatggacaagt 37673763  T
Q  473 attgtgaaacggagggagta 492  Q
    ||| ||||||||| ||||||    
T  37673762 attatgaaacggaaggagta 37673743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 373 - 492
Target Start/End: Original strand, 1646445 - 1646564
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||   |||| |||||||||||||||||||||||||||| |||||   |||||||||||||||||| |||||  ||| ||    
T  1646445 atatgcaagggtattattgacaagataatacttaatgttgcattgaaacttgaaagtgataagtattgtgaaacaaaattattctctaaaatggacaggt 1646544  T
Q  473 attgtgaaacggagggagta 492  Q
    ||| ||||||||||||||||    
T  1646545 attatgaaacggagggagta 1646564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 404 - 463
Target Start/End: Original strand, 14779964 - 14780023
Alignment:
Q  404 ttaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14779964 ttaatcttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 14780023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 384 - 458
Target Start/End: Original strand, 34242143 - 34242217
Alignment:
Q  384 tattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctc 458  Q
    ||||||||||||||||||| ||||| ||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  34242143 tattattgataaaccaatatttaatattgcattaaaacttaaaagtgaccagtaaaatgaaacaaaattattctc 34242217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 392 - 463
Target Start/End: Complemental strand, 1002831 - 1002760
Alignment:
Q  392 ataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    ||||||||||||||||||||||||||| | |||||| ||||||||||||| ||| ||||| |||||||||||    
T  1002831 ataaaccaataattaatgttgcattgagatttgaaaatgacaagtaaaataaaataaaataattctccaaaa 1002760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 485
Target Start/End: Original strand, 4917933 - 4918031
Alignment:
Q  387 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacgga 485  Q
    |||||| || |||||||||||||||| ||| ||| | |||||||||||||||  |||| ||||||| || | |||||   |||| ||||||||||||||    
T  4917933 tattgacaagccaataattaatgttgaattaaaattcgaaagtgacaagtaatgtgaagcaaaattgtttttcaaaaatgacaaatattgtgaaacgga 4918031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 451
Target Start/End: Complemental strand, 27901065 - 27900991
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaat 451  Q
    ||||| |||||||||| |||  ||| |||||| || ||| ||||||||||||||| ||||||||||||| |||||    
T  27901065 gtaagggtattattgacaaattaattattaatattacatcgaaacttgaaagtgaaaagtaaaatgaaataaaat 27900991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 479131 - 479207
Alignment:
Q  387 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    |||||||||| ||| | ||||||||||||||||  ||||||||||||  ||||  | ||||||||| ||||||||||    
T  479131 tattgataaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaa 479207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 15677449 - 15677525
Alignment:
Q  387 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    ||||||||||  |||| ||||||||||||||||  ||||||||||||  ||||  | ||||||||| ||||||||||    
T  15677449 tattgataaaataatatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaa 15677525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 383 - 431
Target Start/End: Complemental strand, 28401444 - 28401396
Alignment:
Q  383 gtattattgataaaccaataattaatgttgcattgaaacttgaaagtga 431  Q
    |||||||||| ||| ||||||||||||| || |||||||||||||||||    
T  28401444 gtattattgacaaatcaataattaatgtggccttgaaacttgaaagtga 28401396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 463
Target Start/End: Complemental strand, 14541399 - 14541340
Alignment:
Q  404 ttaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    ||||||||||||||||  ||||||||||||  |||| |||||||| ||| ||||||||||    
T  14541399 ttaatgttgcattgaactttgaaagtgacagttaaattgaaacaatatttttctccaaaa 14541340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 463
Target Start/End: Complemental strand, 13754049 - 13753964
Alignment:
Q  378 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    |||| ||| |||||||||| ||| | ||||||||| ||||||  ||||||||||||  |||| || ||||||| | ||||||||||    
T  13754049 taagggtaatattgataaaacaacatttaatgttgtattgaactttgaaagtgacagttaaattggaacaaaaatgttctccaaaa 13753964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 36375656 - 36375580
Alignment:
Q  387 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaat-gaaacaaaattattctccaaaa 463  Q
    |||||||||| ||| | ||||||||||||||||  ||||||||||| ||| |||| | ||||||||| ||||||||||    
T  36375656 tattgataaaacaacatttaatgttgcattgaactttgaaagtgac-agtcaaataggaacaaaatttttctccaaaa 36375580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 36917009 - 36917050
Alignment:
Q  378 taagagtattattgataaaccaataattaatgttgcattgaa 419  Q
    ||||| ||||||||||||| | ||||||||||||||||||||    
T  36917009 taagactattattgataaaactataattaatgttgcattgaa 36917050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 10812284 - 10812208
Alignment:
Q  387 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    ||||| |||| ||| | ||||||||||||||||  ||||||||||||  ||||  | ||||||||| ||||||||||    
T  10812284 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaa 10812208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 11560205 - 11560281
Alignment:
Q  387 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    ||||| |||| ||| | ||||||||||||||||  ||||||||||||  ||||  ||||||||| | ||||||||||    
T  11560205 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaatagaaacaaaaattttctccaaaa 11560281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 379 - 419
Target Start/End: Complemental strand, 32901176 - 32901136
Alignment:
Q  379 aagagtattattgataaaccaataattaatgttgcattgaa 419  Q
    |||||||||||||||||| ||  ||||||||||||||||||    
T  32901176 aagagtattattgataaatcatcaattaatgttgcattgaa 32901136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 34357263 - 34357187
Alignment:
Q  387 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    ||||| |||| ||| | ||||||||||||||||  ||||||||||||| ||||  | |||||| || ||||||||||    
T  34357263 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacaattaaataggaacaaattttttctccaaaa 34357187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 373 - 433
Target Start/End: Complemental strand, 43077391 - 43077331
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgaca 433  Q
    |||| |||| ||| ||||| |||| ||||| ||||||||||||||||  ||||||||||||    
T  43077391 atatctaagggtaatattggtaaaacaatatttaatgttgcattgaactttgaaagtgaca 43077331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 44360519 - 44360443
Alignment:
Q  387 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    |||||||||| ||  | ||||||||||||||||  ||||||||||||  ||||  |||||||||  |||||||||||    
T  44360519 tattgataaaacatcatttaatgttgcattgaactttgaaagtgacagttaaatagaaacaaaaaaattctccaaaa 44360443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 5e-42; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 377 - 492
Target Start/End: Original strand, 19692884 - 19692999
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 476  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||    
T  19692884 gtaagggtgttattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaagtgaaacaaaattattctctaaaatagacaagtattg 19692983  T
Q  477 tgaaacggagggagta 492  Q
    ||| ||||| ||||||    
T  19692984 tgatacggatggagta 19692999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 377 - 492
Target Start/End: Original strand, 19703469 - 19703584
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 476  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||    
T  19703469 gtaagggtgttattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaagtgaaacaaaattattctctaaaatagacaagtattg 19703568  T
Q  477 tgaaacggagggagta 492  Q
    ||| ||||| ||||||    
T  19703569 tgatacggatggagta 19703584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 378 - 485
Target Start/End: Complemental strand, 6129063 - 6128956
Alignment:
Q  378 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgt 477  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||   ||| |||||||    
T  6129063 taagggtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattcttcaaaagcgacatgtattgt 6128964  T
Q  478 gaaacgga 485  Q
    ||||||||    
T  6128963 gaaacgga 6128956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 22321387 - 22321267
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||| ||||||    
T  22321387 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatagacaagt 22321288  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| |||||||||||||||||    
T  22321287 attatgaaacggagggagtat 22321267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 373 - 495
Target Start/End: Original strand, 21310579 - 21310701
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  21310579 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 21310678  T
Q  473 attgtgaaacggagggagtatat 495  Q
    ||| |||||||||||||||||||    
T  21310679 attatgaaacggagggagtatat 21310701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 378 - 496
Target Start/End: Original strand, 32543642 - 32543760
Alignment:
Q  378 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgt 477  Q
    |||| |||||| ||| ||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||| ||||   |||||||||||    
T  32543642 taagggtattaatgacaaaccaataattaatgtcgcattaaaacttgaaagtaacaagtaaaatgaaacaaaattattctctaaaagcgacaagtattgt 32543741  T
Q  478 gaaacggagggagtatatt 496  Q
    ||||| || ||||||||||    
T  32543742 gaaacagaaggagtatatt 32543760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 373 - 493
Target Start/End: Original strand, 14261202 - 14261322
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||| ||||||||   |||||||||||||||||| |||||  ||||||    
T  14261202 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagggacaagtattgtgaaacaaaattattctctaaaatggacaagt 14261301  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| |||||||||||||||||    
T  14261302 attatgaaacggagggagtat 14261322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 24706366 - 24706246
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||| ||||||||   |||||||||||||||||| |||||  ||||||    
T  24706366 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagggacaagtattgtgaaacaaaattattctctaaaatggacaagt 24706267  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| |||||||||||||||||    
T  24706266 attatgaaacggagggagtat 24706246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 373 - 493
Target Start/End: Original strand, 25704809 - 25704929
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||| ||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  25704809 atatgcaagggtattattgacaagacaataattaatgttgcactgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 25704908  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| |||||||||||||||||    
T  25704909 attatgaaacggagggagtat 25704929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 373 - 492
Target Start/End: Original strand, 12071718 - 12071837
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  12071718 atatgcaagggtattattgacaagacaagaattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 12071817  T
Q  473 attgtgaaacggagggagta 492  Q
    ||| ||||||||||||||||    
T  12071818 attatgaaacggagggagta 12071837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 373 - 492
Target Start/End: Complemental strand, 40122606 - 40122487
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  40122606 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 40122507  T
Q  473 attgtgaaacggagggagta 492  Q
    ||| |||||||||| |||||    
T  40122506 attatgaaacggagagagta 40122487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 397 - 492
Target Start/End: Complemental strand, 50839126 - 50839031
Alignment:
Q  397 ccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacggagggagta 492  Q
    ||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||   ||||||||||||||| ||||||||||    
T  50839126 ccaataattaatgttgcattgaaacttgaaaatgacaagtaatgtgaaacaaaattattctccaaaagcgacaagtattgtgaaatggagggagta 50839031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 373 - 491
Target Start/End: Original strand, 21064919 - 21065037
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    |||||||||||||||||||  ||  ||||||||||||||||||||||| ||||||| || |||||   |||||||||||||||||| ||||| |||||||    
T  21064919 atatgtaagagtattattgtcaagacaataattaatgttgcattgaaatttgaaagcgataagtattgtgaaacaaaattattctctaaaatgaacaagt 21065018  T
Q  473 attgtgaaacggagggagt 491  Q
    ||| |||||||||||||||    
T  21065019 attatgaaacggagggagt 21065037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 20249133 - 20249013
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||||||| |||||||||| ||  ||||||||||| ||||||||||||||||||| |||| |||   ||||||||||||||||||||||||  ||||||    
T  20249133 atatgtaagggtattattgacaagacaataattaatattgcattgaaacttgaaagagacaggtattgtgaaacaaaattattctccaaaatggacaagt 20249034  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| |||||||||| ||||||    
T  20249033 attatgaaacggagtgagtat 20249013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 373 - 493
Target Start/End: Original strand, 44568995 - 44569115
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  |||||||||||||||||||||||| |||||| ||||||||   |||||||||||||||||| |||||  ||||||    
T  44568995 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacatgaaagggacaagtattgtgaaacaaaattattctctaaaatggacaagt 44569094  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| |||||||||||||||||    
T  44569095 attatgaaacggagggagtat 44569115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 373 - 482
Target Start/End: Original strand, 50768020 - 50768129
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||||||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||| ||   |||||||||||||||||| |||||  ||||||    
T  50768020 atatgtaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattctctaaaatggacaagt 50768119  T
Q  473 attgtgaaac 482  Q
    ||| ||||||    
T  50768120 attatgaaac 50768129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 373 - 495
Target Start/End: Complemental strand, 21661654 - 21661532
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||| |||||||||||||||||||||||||||| || ||   |||||||||||||||||| |||||  ||||||    
T  21661654 atatgcaagggtattattgacaagacaatacttaatgttgcattgaaacttgaaagtgataaatattgtgaaacaaaattattctctaaaatggacaagt 21661555  T
Q  473 attgtgaaacggagggagtatat 495  Q
    ||| |||||||||||||| ||||    
T  21661554 attatgaaacggagggagcatat 21661532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 373 - 495
Target Start/End: Complemental strand, 21670418 - 21670296
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||| |||||||||||||||||||||||||||| || ||   |||||||||||||||||| |||||  ||||||    
T  21670418 atatgcaagggtattattgacaagacaatacttaatgttgcattgaaacttgaaagtgataaatattgtgaaacaaaattattctctaaaatggacaagt 21670319  T
Q  473 attgtgaaacggagggagtatat 495  Q
    ||| |||||||||||||| ||||    
T  21670318 attatgaaacggagggagcatat 21670296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 377 - 482
Target Start/End: Complemental strand, 18507381 - 18507276
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 476  Q
    |||||| ||||||||| ||  |||||||||||||||||||||||||||||||||||||| ||  |||||||||||||| ||| ||||   ||||||||||    
T  18507381 gtaagaatattattgacaagtcaataattaatgttgcattgaaacttgaaagtgacaagaaatgtgaaacaaaattatgctctaaaagcgacaagtattg 18507282  T
Q  477 tgaaac 482  Q
    ||||||    
T  18507281 tgaaac 18507276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 377 - 463
Target Start/End: Original strand, 48652386 - 48652472
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    ||||| |||||||| ||||| ||||||||||||| ||||| |||||| ||||| ||||||||| |||||||||||||||||||||||    
T  48652386 gtaagggtattattaataaatcaataattaatgtcgcattaaaactttaaagtaacaagtaaagtgaaacaaaattattctccaaaa 48652472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 384 - 475
Target Start/End: Original strand, 31892401 - 31892492
Alignment:
Q  384 tattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtatt 475  Q
    ||||||||| ||  |||||||||||||| |||| |||||| |||||||||||||   | ||||||||||||||||||| ||| |||||||||    
T  31892401 tattattgacaagacaataattaatgttacattaaaacttaaaagtgacaagtattgtaaaacaaaattattctccaagatagacaagtatt 31892492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 453
Target Start/End: Original strand, 51777771 - 51777841
Alignment:
Q  382 agtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaatta 453  Q
    ||||||||||| ||||||||||||||||||||| |  ||||| ||||||||||||||| | |||||||||||    
T  51777771 agtattattgacaaaccaataattaatgttgcact-taacttaaaagtgacaagtaaagtaaaacaaaatta 51777841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 378 - 427
Target Start/End: Complemental strand, 26676694 - 26676645
Alignment:
Q  378 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaa 427  Q
    ||||||||||||||||||| ||||||||| ||||||||| ||||||||||    
T  26676694 taagagtattattgataaatcaataattattgttgcattaaaacttgaaa 26676645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 464
Target Start/End: Complemental strand, 8735486 - 8735400
Alignment:
Q  378 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaat 464  Q
    ||||| || ||||| |||| ||||| ||||| ||||||||||  ||||||||||||| ||||  ||||||||||| ||||| |||||    
T  8735486 taagaataatattggtaaaacaatatttaatattgcattgaactttgaaagtgacaattaaatagaaacaaaatttttctctaaaat 8735400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 418 - 485
Target Start/End: Complemental strand, 26676645 - 26676577
Alignment:
Q  418 aaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaata-aacaagtattgtgaaacgga 485  Q
    |||||||||||||||||||||| | |||||||||||||||  |||| |   ||||||||||||||||||    
T  26676645 aaacttgaaagtgacaagtaaagtaaaacaaaattattcttaaaaaaatggcaagtattgtgaaacgga 26676577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 39683870 - 39683946
Alignment:
Q  387 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    |||||||||| ||||| ||||||||||||||||  || |||||||||  ||||  ||||||||||| |||| |||||    
T  39683870 tattgataaaacaatatttaatgttgcattgaactttaaaagtgacagttaaatagaaacaaaatttttctacaaaa 39683946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 378 - 450
Target Start/End: Complemental strand, 42629414 - 42629342
Alignment:
Q  378 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaa 450  Q
    |||| ||| |||||||||| ||| | ||||||||||||||||  ||||||||||||| |||| ||||| ||||    
T  42629414 taagggtaatattgataaaacaaaatttaatgttgcattgaactttgaaagtgacaattaaattgaaataaaa 42629342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 53599942 - 53600018
Alignment:
Q  387 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    ||||| |||| ||||| ||||||||||||||||  ||||||||||||  ||||  | ||||||||| ||||||||||    
T  53599942 tattggtaaaacaatatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaa 53600018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 56576259 - 56576335
Alignment:
Q  387 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    ||||| |||| ||||| ||||||||||||||||  ||||||||||||  ||||  | ||||||||| ||||||||||    
T  56576259 tattggtaaaacaatatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaa 56576335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 490
Target Start/End: Complemental strand, 20714413 - 20714322
Alignment:
Q  399 aataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacggagggag 490  Q
    |||||||||||||||||||||| || ||| ||| || ||| |||||| ||| |||||||| ||||   |||  |||||||||||| ||||||    
T  20714413 aataattaatgttgcattgaaatttaaaaatgataaataatatgaaataaatttattctctaaaagtgacagatattgtgaaacgtagggag 20714322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 415
Target Start/End: Complemental strand, 20714463 - 20714426
Alignment:
Q  378 taagagtattattgataaaccaataattaatgttgcat 415  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  20714463 taagggtattattgacaaaccaataattaatgttgcat 20714426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 3436223 - 3436299
Alignment:
Q  387 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    ||||| |||| ||| | ||||||||||||||||  ||||||||||||  ||||  | ||||||||| ||||||||||    
T  3436223 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaa 3436299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 433
Target Start/End: Original strand, 26906551 - 26906591
Alignment:
Q  393 taaaccaataattaatgttgcattgaaacttgaaagtgaca 433  Q
    |||| ||||| |||||||||||||||| |||||||||||||    
T  26906551 taaaacaatatttaatgttgcattgaaccttgaaagtgaca 26906591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 38542432 - 38542508
Alignment:
Q  387 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    ||||| |||| ||||| ||||||||||| ||||  ||||||||||||  ||||  | ||||||||| ||||||||||    
T  38542432 tattggtaaaacaatatttaatgttgcactgaattttgaaagtgacatttaaataggaacaaaatttttctccaaaa 38542508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 38617904 - 38617852
Alignment:
Q  387 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaa 439  Q
    |||||||||| ||||| ||||||||||||| ||  ||||||||||||| ||||    
T  38617904 tattgataaaacaatatttaatgttgcattaaactttgaaagtgacaattaaa 38617852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 42513182 - 42513258
Alignment:
Q  387 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    ||||| |||| ||| | ||||||||||||||||  ||||||||||||  ||||  | ||||||||| ||||||||||    
T  42513182 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacacttaaatagtaacaaaatttttctccaaaa 42513258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 44069119 - 44069043
Alignment:
Q  387 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    |||||||||| ||| | ||||||||||||||||  ||||||||||||  ||||  | ||||||||| |||| |||||    
T  44069119 tattgataaaacaacatttaatgttgcattgaactttgaaagtgacacttaaataggaacaaaatttttctacaaaa 44069043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 459
Target Start/End: Complemental strand, 50623502 - 50623430
Alignment:
Q  387 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctcc 459  Q
    ||||| |||| ||| | ||||||||||||||||  ||||||||||||| ||||  |||||||| || ||||||    
T  50623502 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacaattaaatagaaacaaattttttctcc 50623430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 2e-41; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 373 - 495
Target Start/End: Original strand, 17942601 - 17942723
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||    
T  17942601 atatgtaagggtattattgacaaaacaataattaatgttgcattgaaacttgaaagtgacaagtattataaaacaaaattattctccaaaatggacaagt 17942700  T
Q  473 attgtgaaacggagggagtatat 495  Q
    ||| |||||||||||||||||||    
T  17942701 attatgaaacggagggagtatat 17942723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 15064814 - 15064694
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||  ||||||    
T  15064814 atatgcaagggtattattgacaagacaataattaatgttgtattgaaacttgaaagtgacaagtattatgaaacaaaattattctccaaaatggacaagt 15064715  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| |||||||||||||||||    
T  15064714 attatgaaacggagggagtat 15064694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 373 - 494
Target Start/End: Original strand, 8235783 - 8235904
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||||||| |||||||||||||  ||||||||||| ||||||||||||||||||||||||||||   |||||||||||||||||| |||||| ||||||    
T  8235783 atatgtaagggtattattgataagacaataattaatattgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatagacaagt 8235882  T
Q  473 attgtgaaacggagggagtata 494  Q
    ||| ||||||||| | ||||||    
T  8235883 attatgaaacggatgaagtata 8235904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 373 - 493
Target Start/End: Original strand, 8626640 - 8626760
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||| ||||||||   |||||||||||||||||| |||||  ||||||    
T  8626640 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagggacaagtattgtgaaacaaaattattctctaaaatggacaagt 8626739  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| |||||||||||||||||    
T  8626740 attatgaaacggagggagtat 8626760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 373 - 493
Target Start/End: Original strand, 13757365 - 13757485
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  13757365 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 13757464  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| ||||||||| |||||||    
T  13757465 attatgaaacggatggagtat 13757485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 373 - 492
Target Start/End: Original strand, 29260350 - 29260469
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||||||| |||||||||| ||  || ||||||||||||||||||||||||||| |||||||||   |||||||||||||||||| |||||  ||||||    
T  29260350 atatgtaagggtattattgacaagacagtaattaatgttgcattgaaacttgaaaatgacaagtattttgaaacaaaattattctctaaaatggacaagt 29260449  T
Q  473 attgtgaaacggagggagta 492  Q
    ||| ||||||||||||||||    
T  29260450 attatgaaacggagggagta 29260469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 373 - 493
Target Start/End: Original strand, 1605736 - 1605856
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||| ||||||| ||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  1605736 atatgcaagggtattattgacaagacaataattaatgttgtattgaaatttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 1605835  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| |||||||||||||||||    
T  1605836 attatgaaacggagggagtat 1605856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 373 - 492
Target Start/End: Original strand, 7761458 - 7761577
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| |||  |||||||||| ||||||||||||||||||||||||| ||   |||||||||||||||||| |||||  ||||||    
T  7761458 atatgcaagggtattattgacaaaataataattaatattgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattctctaaaatggacaagt 7761557  T
Q  473 attgtgaaacggagggagta 492  Q
    ||| ||||||||||||||||    
T  7761558 attatgaaacggagggagta 7761577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 377 - 495
Target Start/End: Complemental strand, 20398353 - 20398235
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 476  Q
    ||||| |||||||||| ||   |||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||| |||||||   ||| ||||||    
T  20398353 gtaagggtattattgacaatttaataattaatgttgcattaaaacttgaaagtggcaagtaaagtgaaacaaaattattttccaaaagtgacatgtattg 20398254  T
Q  477 tgaaacggagggagtatat 495  Q
    ||||||| |||||||||||    
T  20398253 tgaaacgaagggagtatat 20398235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 373 - 492
Target Start/End: Original strand, 4129585 - 4129703
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||| ||||||||||||||||||||||||||||||||||   ||||||||||||||| || |||||  ||||||    
T  4129585 atatgcaagggtattattgacaagacaata-ttaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattttctaaaatggacaagt 4129683  T
Q  473 attgtgaaacggagggagta 492  Q
    ||| ||||||||||||||||    
T  4129684 attatgaaacggagggagta 4129703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 384 - 495
Target Start/End: Original strand, 1814762 - 1814873
Alignment:
Q  384 tattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacg 483  Q
    ||||||||| ||||||||||| |||||||||||| || || ||||||||||||||| ||||| ||||||||||| |||||   ||| |||||||||||||    
T  1814762 tattattgacaaaccaataatcaatgttgcattggaaattaaaagtgacaagtaaagtgaaataaaattattcttcaaaagtgacatgtattgtgaaacg 1814861  T
Q  484 gagggagtatat 495  Q
     ||| |||||||    
T  1814862 aaggaagtatat 1814873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 377 - 455
Target Start/End: Original strand, 3798261 - 3798339
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattatt 455  Q
    ||||| |||||||||||||||  ||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||    
T  3798261 gtaagggtattattgataaactcataattaatgttgcattaaaacttgaaagtgacaagtaaagtgaaacaaaactatt 3798339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 383 - 482
Target Start/End: Original strand, 26860932 - 26861031
Alignment:
Q  383 gtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaac 482  Q
    |||||||||| ||| ||||||| ||||||| |||||||| ||||| ||||||||||| ||||||||| |||||||||||||   ||| ||||||||||||    
T  26860932 gtattattgacaaatcaataatcaatgttgtattgaaacatgaaaatgacaagtaaagtgaaacaaacttattctccaaaaatgacatgtattgtgaaac 26861031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 373 - 492
Target Start/End: Complemental strand, 31559857 - 31559738
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||| | ||  |||||||||||||||||||||||||||||||| |||||||   | ||| |||||||||||| |||||  | ||||    
T  31559857 atatgcaagggtattattaacaagacaataattaatgttgcattgaaacttgaaagtaacaagtattgtaaaataaaattattctctaaaatggagaagt 31559758  T
Q  473 attgtgaaacggagggagta 492  Q
    ||| ||||||||||||||||    
T  31559757 attatgaaacggagggagta 31559738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 373 - 492
Target Start/End: Complemental strand, 30734602 - 30734483
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||||||   |||||||||||||||||||||| |||||| |||||| ||   | ||||||||||||| ||||||||  ||||||    
T  30734602 atatgcaagggtattattgataagataataattaatgttgcattgaaatttgaaaatgacaactattgtaaaacaaaattattttccaaaatggacaagt 30734503  T
Q  473 attgtgaaacggagggagta 492  Q
    ||| ||||| ||||| ||||    
T  30734502 attatgaaaaggaggaagta 30734483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 373 - 439
Target Start/End: Complemental strand, 847895 - 847829
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaa 439  Q
    |||| ||||||||||||||| ||| ||||||||||||||||||||||  |||||| |||||||||||    
T  847895 atatttaagagtattattgacaaagcaataattaatgttgcattgaactttgaaaatgacaagtaaa 847829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 373 - 433
Target Start/End: Original strand, 31244891 - 31244951
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgaca 433  Q
    |||| ||||| || |||||||||| ||| ||||||||||||||||||  ||||||||||||    
T  31244891 atatctaagaataatattgataaaacaagaattaatgttgcattgaactttgaaagtgaca 31244951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 463
Target Start/End: Complemental strand, 30237046 - 30236987
Alignment:
Q  404 ttaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    ||||||||||||||||  ||||||||||||  |||| ||||||||| || ||||||||||    
T  30237046 ttaatgttgcattgaattttgaaagtgacagttaaattgaaacaaattttttctccaaaa 30236987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 463
Target Start/End: Complemental strand, 3849159 - 3849074
Alignment:
Q  378 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    ||||| || ||||| |||| ||| | ||||||||||||||||  ||||||||||||  ||||  | ||||||||| ||||||||||    
T  3849159 taagaataatattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaa 3849074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 418
Target Start/End: Original strand, 14287149 - 14287190
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattga 418  Q
    ||||||||||||| |||||| ||||||||| |||||||||||    
T  14287149 gtaagagtattatggataaatcaataattagtgttgcattga 14287190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 489
Target Start/End: Original strand, 24120645 - 24120734
Alignment:
Q  400 ataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacggaggga 489  Q
    ||||||| ||||||||| |||||  ||||||||||||||  ||||||| || | ||||||||||   |||||| || ||||| |||||||    
T  24120645 ataattagtgttgcattaaaactaaaaagtgacaagtaatgtgaaacacaaattttctccaaaaacgacaagttttttgaaatggaggga 24120734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 22050134 - 22050058
Alignment:
Q  387 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    |||||||||| ||  | ||||||||||||||||  ||||||||||||  ||||  |||||||||  |||||||||||    
T  22050134 tattgataaaacatcatttaatgttgcattgaactttgaaagtgacagttaaatagaaacaaaaaaattctccaaaa 22050058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 8e-38; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 377 - 485
Target Start/End: Original strand, 24876723 - 24876831
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 476  Q
    |||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||   ||||||||||    
T  24876723 gtaagagtattattgacaaaccaataattaatgtcgcattgacacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaaacgacaagtattg 24876822  T
Q  477 tgaaacgga 485  Q
    ||| |||||    
T  24876823 tgagacgga 24876831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 373 - 495
Target Start/End: Original strand, 23526397 - 23526519
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||||||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||  ||||||    
T  23526397 atatgtaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattcttcaaaatggacaagt 23526496  T
Q  473 attgtgaaacggagggagtatat 495  Q
    ||| |||||||||||||||||||    
T  23526497 attatgaaacggagggagtatat 23526519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 373 - 493
Target Start/End: Original strand, 284491 - 284611
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  284491 atatgcaagggtattattgataagtcaataattaatgttgcattgaaacttgaaagtgacaagtattttgaaacaaaattattctctaaaatggacaagt 284590  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| |||||||||||||||||    
T  284591 attatgaaacggagggagtat 284611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 377 - 493
Target Start/End: Complemental strand, 51064869 - 51064753
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 476  Q
    ||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||| |||||  ||||||||||    
T  51064869 gtaagggtattattgataaactaataattaacgttgcattgaaacttgaaagtgacaaataaagtgaaacaaaattattctctaaaatggacaagtattg 51064770  T
Q  477 tgaaacggagggagtat 493  Q
    |||||| || |||||||    
T  51064769 tgaaacagacggagtat 51064753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 373 - 492
Target Start/End: Complemental strand, 34458843 - 34458724
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||||||| ||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||   |||  |    
T  34458843 atatgtaagggtattatcggtaaaccaataattaatgttgcatcgaaacttgaaagtgacaagtaaagtgaaacaaaattattctccaaaagcgacatat 34458744  T
Q  473 attgtgaaacggagggagta 492  Q
    ||||||||||||| ||||||    
T  34458743 attgtgaaacggaaggagta 34458724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 40783776 - 40783656
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  40783776 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 40783677  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| |||||||||||||||||    
T  40783676 attatgaaacggagggagtat 40783656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 373 - 484
Target Start/End: Complemental strand, 40261404 - 40261293
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||   |||  |    
T  40261404 atatgtaagggtattattgacaaaccaataattaatgttgcattgaaacttgaaagtgacaagtaatgtgaaacaaaattattcttcaaaagcgacatat 40261305  T
Q  473 attgtgaaacgg 484  Q
    ||||||||||||    
T  40261304 attgtgaaacgg 40261293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 373 - 492
Target Start/End: Original strand, 321784 - 321903
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||| ||||||| |||||  ||||||    
T  321784 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaaatattctctaaaatggacaagt 321883  T
Q  473 attgtgaaacggagggagta 492  Q
    ||| ||||||||||||||||    
T  321884 attatgaaacggagggagta 321903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 373 - 492
Target Start/End: Complemental strand, 23045398 - 23045279
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||| ||||||||   |||||||||||||||||| |||||  ||||||    
T  23045398 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagggacaagtattgtgaaacaaaattattctctaaaatggacaagt 23045299  T
Q  473 attgtgaaacggagggagta 492  Q
    ||| ||||||||||||||||    
T  23045298 attatgaaacggagggagta 23045279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 377 - 492
Target Start/End: Complemental strand, 31003902 - 31003787
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 476  Q
    ||||| ||||||| || ||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||   | ||||||||    
T  31003902 gtaagggtattatggacaaaccaacaattaatgttgcattgaaacttgaaagtggcaagtaatgtgaaacaaaattattctccaaaagcgataagtattg 31003803  T
Q  477 tgaaacggagggagta 492  Q
    |||||| |||||||||    
T  31003802 tgaaacagagggagta 31003787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 373 - 492
Target Start/End: Complemental strand, 47037971 - 47037852
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   | |||||||||||||||  |||||| ||||||    
T  47037971 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtaaaacaaaattattctttaaaatagacaagt 47037872  T
Q  473 attgtgaaacggagggagta 492  Q
    ||| ||||||||||||||||    
T  47037871 attatgaaacggagggagta 47037852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 373 - 487
Target Start/End: Original strand, 46771796 - 46771910
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    |||||||||||||||||||| ||   ||||||||||||| ||||||||||||||||||| |||||   ||||||||||||||||| |||||| |||||||    
T  46771796 atatgtaagagtattattgacaagaaaataattaatgttacattgaaacttgaaagtgataagtattgtgaaacaaaattattcttcaaaatgaacaagt 46771895  T
Q  473 attgtgaaacggagg 487  Q
    ||| |||||||||||    
T  46771896 attatgaaacggagg 46771910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 385 - 492
Target Start/End: Original strand, 18396864 - 18396971
Alignment:
Q  385 attattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacgg 484  Q
    |||||||| ||  ||||||||||||||||||||||||||||||||||||| | |  | |||||||||||||||||||||  |||||||||||||||| ||    
T  18396864 attattgaaaagtcaataattaatgttgcattgaaacttgaaagtgacaaattatgtaaaacaaaattattctccaaaagcaacaagtattgtgaaatgg 18396963  T
Q  485 agggagta 492  Q
    ||||||||    
T  18396964 agggagta 18396971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 384 - 493
Target Start/End: Complemental strand, 24772014 - 24771905
Alignment:
Q  384 tattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacg 483  Q
    ||||||||| ||| ||||||||||| ||||||||||||||||||| |||| |||   |||||||||||||||||| |||||  ||||||||| |||||||    
T  24772014 tattattgaaaaaacaataattaatattgcattgaaacttgaaagagacatgtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacg 24771915  T
Q  484 gagggagtat 493  Q
    ||||||||||    
T  24771914 gagggagtat 24771905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 383 - 493
Target Start/End: Complemental strand, 1837937 - 1837826
Alignment:
Q  383 gtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaa---aatgaaacaaaattattctccaaaataaacaagtattgtga 479  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||   | ||||||||||||||||| ||||  ||||| ||||| |||    
T  1837937 gtattattgataaatcaataattaatgttgcattgaaacttaaaagtgacaagtaaattattgaaacaaaattattcttcaaa--aaacatgtattatga 1837840  T
Q  480 aacggagggagtat 493  Q
    |||||| |||||||    
T  1837839 aacggatggagtat 1837826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 377 - 487
Target Start/End: Original strand, 14925626 - 14925734
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 476  Q
    |||||||||||||||| |||||||||  ||| |||||||||||||||||||  |||||||||| |||||||||||||| ||| ||||   ||||||||||    
T  14925626 gtaagagtattattgacaaaccaata--taaggttgcattgaaacttgaaaacgacaagtaaagtgaaacaaaattatgctctaaaaacgacaagtattg 14925723  T
Q  477 tgaaacggagg 487  Q
    |||||||||||    
T  14925724 tgaaacggagg 14925734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 25929261 - 25929368
Alignment:
Q  378 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgt 477  Q
    |||| |||||||||||||| ||||| |||||||||| |||||||||||||| | ||||| ||||||||||||||||||||  ||||   |||||||||||    
T  25929261 taagggtattattgataaatcaatatttaatgttgcgttgaaacttgaaaggggcaagtgaaatgaaacaaaattattctttaaaagcgacaagtattgt 25929360  T
Q  478 gaaacgga 485  Q
    ||||||||    
T  25929361 gaaacgga 25929368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 384 - 455
Target Start/End: Complemental strand, 40052572 - 40052501
Alignment:
Q  384 tattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattatt 455  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  40052572 tattattgacaaaccaataattaatgttgcattgaaacttgaaagtgacaagtaatgtgaaacaaaattatt 40052501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 378 - 495
Target Start/End: Complemental strand, 23166965 - 23166848
Alignment:
Q  378 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgt 477  Q
    ||||||||||||||| ||| ||||||||||||||| |||||||||||||||| | || |||  |||||||||||||||||| ||||   || ||||||||    
T  23166965 taagagtattattgacaaatcaataattaatgttgtattgaaacttgaaagtaataaataatgtgaaacaaaattattctctaaaagcgacgagtattgt 23166866  T
Q  478 gaaacggagggagtatat 495  Q
    ||||||||  ||||||||    
T  23166865 gaaacggatagagtatat 23166848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 377 - 492
Target Start/End: Complemental strand, 27143127 - 27143014
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 476  Q
    ||||| |||||||||| ||||||||||||||||||| |||||||||||  ||||||||||||  |||||||||||||||||||||||   |||| ||||     
T  27143127 gtaagggtattattgacaaaccaataattaatgttgtattgaaacttg--agtgacaagtaatgtgaaacaaaattattctccaaaagcgacaattatta 27143030  T
Q  477 tgaaacggagggagta 492  Q
    |||| |||| ||||||    
T  27143029 tgaagcggatggagta 27143014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 373 - 485
Target Start/End: Complemental strand, 31061578 - 31061463
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgaca---agtaaaatgaaacaaaattattctccaaaataaaca 469  Q
    |||||| || |||||||||  |||||||||||||||||||||||||||||||| |||||||   |||||  ||||| ||||||||| |||||||   |||    
T  31061578 atatgtgagggtattattgtcaaaccaataattaatgttgcattgaaacttgagagtgacaagtagtaatgtgaaataaaattattttccaaaagtgaca 31061479  T
Q  470 agtattgtgaaacgga 485  Q
    ||||||||||||||||    
T  31061478 agtattgtgaaacgga 31061463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 373 - 493
Target Start/End: Original strand, 33082902 - 33083022
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    |||| |||| |||||||||| ||  ||||||||||| ||||||||||| ||||||| |||| |||   |||||||||||||||||  |||||  ||||||    
T  33082902 atatttaagggtattattgagaagacaataattaatattgcattgaaatttgaaagagacatgtattgtgaaacaaaattattctttaaaatggacaagt 33083001  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| |||||||||||||||||    
T  33083002 attatgaaacggagggagtat 33083022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 373 - 486
Target Start/End: Complemental strand, 27211074 - 27210961
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  |||||||||||||||||||||||||| || ||||||||||   |||||||||||||||||  |||||  |||| |    
T  27211074 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttaaatgtgacaagtattgtgaaacaaaattattcttaaaaatggacaaat 27210975  T
Q  473 attgtgaaacggag 486  Q
    ||| ||||||||||    
T  27210974 attatgaaacggag 27210961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 398 - 485
Target Start/End: Complemental strand, 40562380 - 40562293
Alignment:
Q  398 caataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacgga 485  Q
    ||||||||||||||||||||||||||||||||||||||||   | ||||||||| ||||| ||||||  ||||||||| | |||||||    
T  40562380 caataattaatgttgcattgaaacttgaaagtgacaagtattgtaaaacaaaatcattcttcaaaatggacaagtattataaaacgga 40562293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 401 - 456
Target Start/End: Complemental strand, 14350565 - 14350510
Alignment:
Q  401 taattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattc 456  Q
    ||||||||||||||||||||||| |||||||||||||| || ||||||||||||||    
T  14350565 taattaatgttgcattgaaactttaaagtgacaagtaatataaaacaaaattattc 14350510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 377 - 423
Target Start/End: Original strand, 3657236 - 3657282
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaactt 423  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||    
T  3657236 gtaaaagtattattgacaaaccaataattaatgttgcattgaaactt 3657282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 456
Target Start/End: Original strand, 1749457 - 1749515
Alignment:
Q  398 caataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattc 456  Q
    |||||| ||||||||||||||||||| ||||| |||||||   ||||||||||||||||    
T  1749457 caataactaatgttgcattgaaacttaaaagtaacaagtattgtgaaacaaaattattc 1749515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 378 - 463
Target Start/End: Original strand, 19455542 - 19455626
Alignment:
Q  378 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    |||| ||| ||||| |||| ||| | ||||||||||||||||  ||||||||||||| |||| |||||||||| | ||||||||||    
T  19455542 taagggtaatattggtaaaacaacatttaatgttgcattgaactttgaaagtgacaattaaattgaaacaaaaat-ttctccaaaa 19455626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 378 - 463
Target Start/End: Complemental strand, 32348072 - 32347987
Alignment:
Q  378 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    |||| ||| ||||| |||| ||| | ||||||||||||||||  ||||||||| ||  |||| |||||||||||| ||||||||||    
T  32348072 taagggtaatattggtaaaacaacatttaatgttgcattgaactttgaaagtggcagttaaattgaaacaaaatttttctccaaaa 32347987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 399 - 463
Target Start/End: Complemental strand, 19093341 - 19093277
Alignment:
Q  399 aataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    |||| ||||||||||||||||  |||||||||||| |||||  | ||||||||| ||||||||||    
T  19093341 aatatttaatgttgcattgaactttgaaagtgacaggtaaataggaacaaaatttttctccaaaa 19093277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 385 - 455
Target Start/End: Complemental strand, 17581139 - 17581069
Alignment:
Q  385 attattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattatt 455  Q
    |||||||| |||| || |||||| |||| ||||||| |||||| |||||| |||| | |||||||||||||    
T  17581139 attattgacaaacaaaaaattaacgttggattgaaatttgaaaatgacaaataaagtaaaacaaaattatt 17581069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 463
Target Start/End: Complemental strand, 5597917 - 5597832
Alignment:
Q  378 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    |||| ||| |||||||||| || || ||||||||||||||||  ||| ||||||||  ||||  |||||||||  |||||||||||    
T  5597917 taagggtaatattgataaaacattatttaatgttgcattgaactttggaagtgacagttaaatagaaacaaaaaaattctccaaaa 5597832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 35531447 - 35531523
Alignment:
Q  387 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    ||||| |||| ||| | ||||||||||||||||  ||||||||||||  ||||  | ||||||||| ||||||||||    
T  35531447 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaa 35531523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 373 - 433
Target Start/End: Complemental strand, 51613510 - 51613450
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgaca 433  Q
    |||| |||||||| |||||||||| ||| | |||||| |||||||||  ||||||||||||    
T  51613510 atatctaagagtaatattgataaaacaacatttaatgatgcattgaactttgaaagtgaca 51613450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 3e-34; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 373 - 495
Target Start/End: Original strand, 27813969 - 27814091
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  27813969 atatgcaagggtattattgacaacacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 27814068  T
Q  473 attgtgaaacggagggagtatat 495  Q
    ||| |||||||||||||||||||    
T  27814069 attatgaaacggagggagtatat 27814091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 373 - 493
Target Start/End: Original strand, 47110608 - 47110728
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| ||||| || ||||    
T  47110608 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatgaataagt 47110707  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| |||||||||||||||||    
T  47110708 attatgaaacggagggagtat 47110728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 36453243 - 36453123
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  36453243 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 36453144  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| |||||||||| ||||||    
T  36453143 attatgaaacggagagagtat 36453123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 377 - 492
Target Start/End: Original strand, 16662255 - 16662370
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 476  Q
    ||||| |||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||| |||||   ||||||||||    
T  16662255 gtaagggtattaatgacaaatcaataattaatgttgcattgaaacttgaaagtgacaagtaatttaaaacaaaattattcttcaaaagtgacaagtattg 16662354  T
Q  477 tgaaacggagggagta 492  Q
    ||||| ||||||||||    
T  16662355 tgaaatggagggagta 16662370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 377 - 492
Target Start/End: Original strand, 17636615 - 17636730
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 476  Q
    ||||| |||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||| |||||   ||||||||||    
T  17636615 gtaagggtattaatgacaaatcaataattaatgttgcattgaaacttgaaagtgacaagtaatttaaaacaaaattattcttcaaaagtgacaagtattg 17636714  T
Q  477 tgaaacggagggagta 492  Q
    ||||| ||||||||||    
T  17636715 tgaaatggagggagta 17636730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 25614472 - 25614352
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  |||||||||||||||||||||||||| |||||||||||||   |||||||||||||||||| |||||  |||| |    
T  25614472 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttaaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaatt 25614373  T
Q  473 attgtgaaacggagggagtat 493  Q
    ||| |||||||||||||||||    
T  25614372 attatgaaacggagggagtat 25614352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 373 - 492
Target Start/End: Original strand, 10981666 - 10981785
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  |||| |    
T  10981666 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaaat 10981765  T
Q  473 attgtgaaacggagggagta 492  Q
    ||| ||||| ||||||||||    
T  10981766 attatgaaatggagggagta 10981785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 373 - 494
Target Start/End: Original strand, 40349120 - 40349240
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| ||||||||||  || |||||||||||||||||||||||||| |||||||||||||   |||||| ||||||||||| |||||  ||||||    
T  40349120 atatgcaagggtattattgaccaaacaataattaatgttgcattgaaacttaaaagtgacaagtattgtgaaac-aaattattctctaaaatggacaagt 40349218  T
Q  473 attgtgaaacggagggagtata 494  Q
    ||| ||||||||||||||||||    
T  40349219 attatgaaacggagggagtata 40349240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 373 - 457
Target Start/End: Original strand, 3091671 - 3091755
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattct 457  Q
    ||||||||| |||||||||| ||||||||| |||||||||||||||||||| ||| ||||||||||| |||||||||||||||||    
T  3091671 atatgtaagggtattattgacaaaccaatatttaatgttgcattgaaacttaaaaatgacaagtaaagtgaaacaaaattattct 3091755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 377 - 463
Target Start/End: Complemental strand, 27941099 - 27941013
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    ||||| |||||||||| || |||||||||||||||||| |||||||||||||||||||||||  |||||||||||| ||||||||||    
T  27941099 gtaagggtattattgacaagccaataattaatgttgcaatgaaacttgaaagtgacaagtaatgtgaaacaaaattgttctccaaaa 27941013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 387 - 493
Target Start/End: Original strand, 16360549 - 16360654
Alignment:
Q  387 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacggag 486  Q
    |||||| ||||||||| ||||||||| |||||||||||||||||||||||||| |||| | ||||||||||||||||   |||| ||||||||||| ||     
T  16360549 tattgacaaaccaatatttaatgttgtattgaaacttgaaagtgacaagtaaagtgaagc-aaattattctccaaaaacgacaaatattgtgaaacagaa 16360647  T
Q  487 ggagtat 493  Q
    |||||||    
T  16360648 ggagtat 16360654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 383 - 463
Target Start/End: Complemental strand, 24456874 - 24456794
Alignment:
Q  383 gtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    ||||||||||||||  | || |||||||||||||||||||||| ||||||||||||| | ||||||||||||||| |||||    
T  24456874 gtattattgataaattagtagttaatgttgcattgaaacttgagagtgacaagtaaagttaaacaaaattattcttcaaaa 24456794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 373 - 434
Target Start/End: Complemental strand, 3498874 - 3498813
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaa 434  Q
    ||||||||||||||||| |||||| ||||||||||| ||||||||||| ||||| |||||||    
T  3498874 atatgtaagagtattatcgataaatcaataattaattttgcattgaaagttgaatgtgacaa 3498813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 381 - 463
Target Start/End: Complemental strand, 7743509 - 7743427
Alignment:
Q  381 gagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    |||||||| ||| || |||||||||||  |||||||||||||| ||| |||||| |||| ||||| ||||||||||| |||||    
T  7743509 gagtattactgagaatccaataattaacattgcattgaaacttaaaaatgacaaataaagtgaaataaaattattcttcaaaa 7743427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 377 - 489
Target Start/End: Original strand, 8380100 - 8380210
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 476  Q
    ||||| ||||| || | |||||||||| |||||||| |||||||||| ||||||||||  ||| |||||||   |||||||||||||   ||| ||||||    
T  8380100 gtaagggtatttttaacaaaccaataactaatgttgtattgaaacttaaaagtgacaaaaaaagtgaaacag--ttattctccaaaaacgacatgtattg 8380197  T
Q  477 tgaaacggaggga 489  Q
    | |||||||||||    
T  8380198 taaaacggaggga 8380210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 378 - 463
Target Start/End: Complemental strand, 35112523 - 35112438
Alignment:
Q  378 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    |||| ||| ||||| |||| ||||| ||||||||||| ||||  ||||||||||||  |||| |||||||||||| ||||||||||    
T  35112523 taagggtaatattggtaaaacaatatttaatgttgcaatgaactttgaaagtgacagttaaattgaaacaaaatttttctccaaaa 35112438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 31399089 - 31399165
Alignment:
Q  387 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    ||||| |||| ||| | ||||||||||||||||  ||||||||||||| ||||| |||||||| || ||||||||||    
T  31399089 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacaattaaaaagaaacaaattttttctccaaaa 31399165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 450
Target Start/End: Original strand, 37983300 - 37983366
Alignment:
Q  384 tattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaa 450  Q
    ||||||||| |||| ||||||||||||| |||||| | || |||||||||| |||||||||| ||||    
T  37983300 tattattgacaaactaataattaatgttacattgatatttaaaagtgacaaataaaatgaaataaaa 37983366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 33257966 - 33257890
Alignment:
Q  387 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    ||||| |||| ||| | ||||||||||||||||  |||||||||| |  |||| |||||||||||| ||||||||||    
T  33257966 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgatagttaaattgaaacaaaatttttctccaaaa 33257890  T

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Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 403 - 457
Target Start/End: Original strand, 28200488 - 28200542
Alignment:
Q  403 attaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattct 457  Q
    ||||||| || ||| |||||| ||||||||||||||| |||||||||||| ||||    
T  28200488 attaatgctgtattaaaacttaaaagtgacaagtaaagtgaaacaaaattgttct 28200542  T

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Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 383 - 419
Target Start/End: Original strand, 6737258 - 6737294
Alignment:
Q  383 gtattattgataaaccaataattaatgttgcattgaa 419  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  6737258 gtattattgataaaacaataattaatattgcattgaa 6737294  T

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Target: scaffold0939 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0939
Description:

Target: scaffold0939; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 384 - 462
Target Start/End: Original strand, 1110 - 1188
Alignment:
Q  384 tattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaa 462  Q
    |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||| ||||||||||||||||||||    
T  1110 tattattgataaaccaataattaatgttgcatcgaaacttaaaaatgacaagtaaaataaaacaaaattattctccaaa 1188  T

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Target: scaffold0168 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 377 - 493
Target Start/End: Original strand, 7830 - 7946
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 476  Q
    |||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||  ||||  |||||||||||  ||||   ||||||||||    
T  7830 gtaagagtattattgacaaaccgataattaatgttgcattaaaacttgaaagtgacaagtaatgtgaattaaaattattctttaaaaacgacaagtattg 7929  T
Q  477 tgaaacggagggagtat 493  Q
    |||||| || |||||||    
T  7930 tgaaacagatggagtat 7946  T

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Target: scaffold1770 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold1770
Description:

Target: scaffold1770; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 373 - 492
Target Start/End: Original strand, 320 - 438
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 472  Q
    ||||| ||| |||||||||| ||  ||||| ||||||||||||||||||||||||||||||||||   ||||||||||||||| || |||||  ||||||    
T  320 atatgcaagggtattattgacaagacaata-ttaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattttctaaaatggacaagt 418  T
Q  473 attgtgaaacggagggagta 492  Q
    ||| ||||||||||||||||    
T  419 attatgaaacggagggagta 438  T

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Target: scaffold0054 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 384 - 492
Target Start/End: Original strand, 45622 - 45730
Alignment:
Q  384 tattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacg 483  Q
    ||||||||||||  ||||||||||| ||||||||||| ||||||| |||| |||   |||||||||||||||||| |||||  ||||||||| |||||||    
T  45622 tattattgataatacaataattaatattgcattgaaatttgaaagagacatgtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacg 45721  T
Q  484 gagggagta 492  Q
    |||||||||    
T  45722 gagggagta 45730  T

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Target: scaffold0025 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 378 - 458
Target Start/End: Complemental strand, 65279 - 65199
Alignment:
Q  378 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctc 458  Q
    |||| |||||||||| ||||||||||||||| ||||||||||| || |||||||||||||| |||||||||||||||||||    
T  65279 taagggtattattgacaaaccaataattaatattgcattgaaatttaaaagtgacaagtaatatgaaacaaaattattctc 65199  T

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Target: scaffold0343 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 377 - 482
Target Start/End: Complemental strand, 7015 - 6911
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 476  Q
    |||||||||||||||| |   |||||||||||||||||||||||||| || | ||||| ||| ||||||||||||||||||||||||   ||||||||||    
T  7015 gtaagagtattattgacacgtcaataattaatgttgcattgaaacttaaacg-gacaaataatatgaaacaaaattattctccaaaaacgacaagtattg 6917  T
Q  477 tgaaac 482  Q
    ||||||    
T  6916 tgaaac 6911  T

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Target: scaffold0076 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 377 - 493
Target Start/End: Complemental strand, 15438 - 15322
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 476  Q
    ||||| |||||||||| ||||| |||||||||||||||||||||||| ||||| ||| ||||| |||||||| ||| ||| | ||||| | ||| |||||    
T  15438 gtaagcgtattattgacaaaccgataattaatgttgcattgaaacttaaaagttacatgtaaagtgaaacaatattgttcactaaaattatcaaatattg 15339  T
Q  477 tgaaacggagggagtat 493  Q
    |||||| ||| ||||||    
T  15338 tgaaacagagtgagtat 15322  T

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Target: scaffold0056 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 377 - 482
Target Start/End: Original strand, 71245 - 71350
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 476  Q
    ||||| |||| ||| | ||||||||||||||| ||||||| |||||| ||||||||||||||  ||||| ||||||||||| |||||   ||||||||||    
T  71245 gtaagggtataattaacaaaccaataattaattttgcattcaaacttaaaagtgacaagtaatgtgaaataaaattattcttcaaaaacgacaagtattg 71344  T
Q  477 tgaaac 482  Q
    ||||||    
T  71345 tgaaac 71350  T

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Target: scaffold0062 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 384 - 464
Target Start/End: Complemental strand, 375 - 295
Alignment:
Q  384 tattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaat 464  Q
    ||||||||| ||  ||||||||||||||||||| ||| || |||||||||||||   |||||||||||||||||| |||||    
T  375 tattattgacaagacaataattaatgttgcattaaaatttaaaagtgacaagtattgtgaaacaaaattattctctaaaat 295  T

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Target: scaffold0060 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 377 - 493
Target Start/End: Original strand, 10904 - 11025
Alignment:
Q  377 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaac-----aaaattattctccaaaataaacaag 471  Q
    |||||| ||||||||| ||| ||||| ||||||||||||  |||||| || ||||||||||||  | |||     ||||| |||||||||||  ||||||    
T  10904 gtaagaatattattgacaaatcaatatttaatgttgcatataaacttaaatgtgacaagtaaagcggaacaaattaaaataattctccaaaagcaacaag 11003  T
Q  472 tattgtgaaacggagggagtat 493  Q
    |||||||||| | |||||||||    
T  11004 tattgtgaaatgaagggagtat 11025  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 439
Target Start/End: Original strand, 419639 - 419700
Alignment:
Q  378 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaa 439  Q
    |||||||| |||||||||| ||| | |||| |||||||||||  ||||||||||||| ||||    
T  419639 taagagtaatattgataaaacaacatttaaagttgcattgaattttgaaagtgacaaataaa 419700  T

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Target: scaffold0172 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 26283 - 26359
Alignment:
Q  387 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 463  Q
    ||||| |||| ||| | ||||||||||||||||  || |||||||||| ||||  |||||||| || ||||||||||    
T  26283 tattggtaaaacaacatttaatgttgcattgaactttaaaagtgacaattaaatagaaacaaattttttctccaaaa 26359  T

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Target: scaffold0129 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 441 - 493
Target Start/End: Complemental strand, 19059 - 19007
Alignment:
Q  441 tgaaacaaaattattctccaaaataaacaagtattgtgaaacggagggagtat 493  Q
    |||||||||||||||||||||||   ||||||||||| ||| |||| ||||||    
T  19059 tgaaacaaaattattctccaaaaacgacaagtattgtaaaaaggagagagtat 19007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 373 - 433
Target Start/End: Original strand, 147270 - 147330
Alignment:
Q  373 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgaca 433  Q
    |||| |||| ||| |||||||||| ||| | ||||||||||||||||  ||||||||||||    
T  147270 atatctaagggtaatattgataaaacaacatttaatgttgcattgaactttgaaagtgaca 147330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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