View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20902_low_29 (Length: 238)
Name: NF20902_low_29
Description: NF20902
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20902_low_29 |
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Alignment Details
Target: chr1 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 48824299 - 48824519
Alignment:
| Q |
1 |
tgatgcaaagagaacgattgtatcatgtctttttactttctcatacatttactctatgaatggaaaacaacttaacaagtgcgtatgtattaaatcgata |
100 |
Q |
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| T |
48824299 |
tgatgcaaagagaacgattgtatcatgtctttttactttctcatacatttactctatgaatggaaaacaacttaacaagtgcgtatgtattaaatcgata |
48824398 |
T |
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| Q |
101 |
gagaaggttaataagtaaggataaggcagttgtattagaaaggaaggagtaacattaactaagatatatggtcagtgtgtgattagcttattaagttaag |
200 |
Q |
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| T |
48824399 |
gagaaggttaataagtaaggataagtcagttgtattagaaaggaaggagtaacattaactaagatatatggtcagtgtgtgattagcttattaagttaag |
48824498 |
T |
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| Q |
201 |
ccaagcgatacttgatcacac |
221 |
Q |
| |
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||||||||||||||||||||| |
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| T |
48824499 |
ccaagcgatacttgatcacac |
48824519 |
T |
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