View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20903_high_9 (Length: 301)
Name: NF20903_high_9
Description: NF20903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20903_high_9 |
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Alignment Details
Target: chr3 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 27 - 264
Target Start/End: Original strand, 34899738 - 34899975
Alignment:
| Q |
27 |
atcatattgtcagtgatatcatctgcacaaattcacataaaattttgtagttggaagatacatacctttcatgtttggtgagaatggaaggaaaattttg |
126 |
Q |
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| T |
34899738 |
atcatattgtcagtgatatcatctgcacaaattcacataaaattttgtagttggaagatacatacctttcatgtttggtgagaatggaaggaaaattttg |
34899837 |
T |
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| Q |
127 |
agactataaggttgcatacacgcaggggaagacacaatttagcttttgttgacatcaaatagcgagagatgaactaaagagagatgtgtttatatgcata |
226 |
Q |
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| T |
34899838 |
agactataaggttgcatacacgcaggggaagacacaatttagcttttgttgacatcaaatagcgagagaagaactaaagagagatgtgtttatatgcata |
34899937 |
T |
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| Q |
227 |
taggtaaagtttggtagtttcaactttcaagttgagat |
264 |
Q |
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| T |
34899938 |
taggtaaagtttggtagtttcaactttcaagttgagat |
34899975 |
T |
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