View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20905_high_32 (Length: 300)
Name: NF20905_high_32
Description: NF20905
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20905_high_32 |
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Alignment Details
Target: chr4 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 14 - 284
Target Start/End: Original strand, 52070959 - 52071229
Alignment:
| Q |
14 |
aagaagtgaaataatgaaggttgttagtcacatttttctcatcaacaaagctacattctgtccagttcttgagaatctcatccgaaaacataggagtctg |
113 |
Q |
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| T |
52070959 |
aagaagtaaaataatgaaggttgttagtcacatttttctcatcaacaaaactacattctgtccagttcttgagaatctcatccgaaaacataggagtctg |
52071058 |
T |
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| Q |
114 |
gtcagaacaaggtgacaataactcattgtaatcaaaattgcatgcagttgaaaaatccgagttcaaaagttcggataagctaatatcatgatctcccatg |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52071059 |
gtcagaacaaggtgacaataactcattgtaatcaaaattgcatgcagttgaaaaatccgagttcaaaagttcggataagctaatatcatgatctcccatg |
52071158 |
T |
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| Q |
214 |
ttaaaatcaactagcaaatctgtggatagtccttttttcgcatctgaaaatgacaaaaattcattaccatt |
284 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52071159 |
ttaaaatcaactagcaaatctgtggatagtccttttttcgcatctgaaaatgacaaaaattcattaccatt |
52071229 |
T |
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