View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20905_high_36 (Length: 273)
Name: NF20905_high_36
Description: NF20905
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20905_high_36 |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 17 - 254
Target Start/End: Original strand, 19301887 - 19302124
Alignment:
| Q |
17 |
aggagcagagaccaagtgaaaacccaactattctgaagtcatgaatctctcacaagtttttcacgaagaagtttagacacatgtcctttgaatttctcaa |
116 |
Q |
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| T |
19301887 |
aggagcagaaaccaagtgaaaacccacctattctgaagtcatgaatctctcacaagtttttcatgaagaagtttagacacatgtcctttgactttctcaa |
19301986 |
T |
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| Q |
117 |
tcttccaataattttgtttaacgtaggtcggtcacccttttacttcccaacccaggtaagtagaacaggattatacatttttcggctcactgacgaactt |
216 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
19301987 |
tctttcaataattttgtttaacgtaggtcggtcacccttttacttcccaacccaggtaagtagaacaggattatccatttttcggctcactgacgaactt |
19302086 |
T |
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| Q |
217 |
actcattttaagctcaaactacagtttggggcctattt |
254 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
19302087 |
actcattttaagctcaaactacagtttggggcctattt |
19302124 |
T |
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