View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20905_low_59 (Length: 207)
Name: NF20905_low_59
Description: NF20905
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20905_low_59 |
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Alignment Details
Target: chr3 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 15 - 192
Target Start/End: Original strand, 38716981 - 38717158
Alignment:
| Q |
15 |
gatatgaacccacattttattacgggtaaatatgaattttccctaatacacgacctactatactatataaacatcaatcagaagcccgatttccctcctc |
114 |
Q |
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| T |
38716981 |
gatatggacccacattttattacgggtaaatatgaattttccctaatacacgacctactatactatataaacatcaatcagaagcccgatttccctcctc |
38717080 |
T |
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| Q |
115 |
tgccttcatttctggtttctatcgaaaatcacggacacatttcattccttaaaaaaccaacactaaaacaacatagtt |
192 |
Q |
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| T |
38717081 |
tgccttcatttctggtttctatcgaaaatcacggacacatttcattccttaaaaaacaaacactaaaacaacatagtt |
38717158 |
T |
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