View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20909_high_15 (Length: 357)

Name: NF20909_high_15
Description: NF20909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20909_high_15
NF20909_high_15
[»] chr6 (15 HSPs)
chr6 (218-357)||(3827475-3827614)
chr6 (31-122)||(28636551-28636642)
chr6 (31-122)||(5114568-5114659)
chr6 (31-122)||(31073497-31073588)
chr6 (1-122)||(25468921-25469042)
chr6 (1-122)||(31574080-31574199)
chr6 (31-122)||(24640540-24640631)
chr6 (31-122)||(25472367-25472458)
chr6 (31-122)||(31573825-31573916)
chr6 (33-122)||(30251046-30251135)
chr6 (31-122)||(29891435-29891526)
chr6 (45-122)||(29891194-29891271)
chr6 (1-88)||(5120858-5120943)
chr6 (46-122)||(30250806-30250882)
chr6 (52-123)||(11523806-11523876)
[»] chr5 (22 HSPs)
chr5 (218-357)||(30764073-30764212)
chr5 (218-357)||(30761250-30761391)
chr5 (31-122)||(5161683-5161774)
chr5 (32-122)||(28289785-28289875)
chr5 (31-122)||(18150078-18150169)
chr5 (31-122)||(19291457-19291548)
chr5 (1-122)||(21371051-21371170)
chr5 (31-122)||(28289999-28290090)
chr5 (31-123)||(22651445-22651537)
chr5 (31-122)||(38900744-38900833)
chr5 (31-122)||(8418976-8419067)
chr5 (31-122)||(15115450-15115541)
chr5 (31-114)||(15029672-15029755)
chr5 (64-123)||(22651699-22651758)
chr5 (31-122)||(14340480-14340571)
chr5 (31-122)||(32697578-32697669)
chr5 (31-122)||(39083460-39083551)
chr5 (33-122)||(14340762-14340851)
chr5 (31-88)||(27307161-27307217)
chr5 (218-270)||(1811212-1811264)
chr5 (50-122)||(27307413-27307485)
chr5 (31-122)||(38900997-38901086)
[»] chr7 (36 HSPs)
chr7 (218-357)||(5827417-5827556)
chr7 (31-122)||(26026418-26026509)
chr7 (31-122)||(786883-786974)
chr7 (31-122)||(7732588-7732679)
chr7 (31-122)||(48247946-48248037)
chr7 (31-122)||(5745739-5745830)
chr7 (31-122)||(11973757-11973848)
chr7 (31-122)||(14311642-14311733)
chr7 (31-122)||(16081654-16081745)
chr7 (31-122)||(25637553-25637644)
chr7 (31-122)||(26026673-26026764)
chr7 (31-122)||(26048302-26048393)
chr7 (31-122)||(48247691-48247782)
chr7 (32-122)||(9181764-9181854)
chr7 (31-120)||(24929660-24929749)
chr7 (1-122)||(28687854-28687973)
chr7 (35-122)||(5745994-5746081)
chr7 (31-110)||(9181632-9181711)
chr7 (31-122)||(27245304-27245395)
chr7 (48-122)||(26048065-26048139)
chr7 (31-122)||(39388621-39388713)
chr7 (35-122)||(7732842-7732929)
chr7 (31-122)||(16081399-16081490)
chr7 (35-122)||(27245559-27245646)
chr7 (52-122)||(34595127-34595197)
chr7 (33-122)||(787137-787226)
chr7 (33-122)||(15712467-15712556)
chr7 (33-122)||(25637300-25637389)
chr7 (32-112)||(14311417-14311497)
chr7 (1-122)||(35161156-35161276)
chr7 (31-122)||(33880940-33881030)
chr7 (35-122)||(35160906-35160992)
chr7 (32-122)||(11971439-11971529)
chr7 (49-122)||(34594700-34594773)
chr7 (35-83)||(5184498-5184546)
chr7 (74-122)||(5334013-5334061)
[»] chr3 (52 HSPs)
chr3 (218-357)||(44508069-44508208)
chr3 (1-122)||(34105003-34105124)
chr3 (31-122)||(51472955-51473046)
chr3 (31-122)||(51828895-51828986)
chr3 (33-122)||(55389952-55390041)
chr3 (31-122)||(41998330-41998421)
chr3 (31-122)||(49951901-49951992)
chr3 (31-122)||(50662767-50662858)
chr3 (1-122)||(330191-330310)
chr3 (31-123)||(46013522-46013614)
chr3 (1-122)||(51828029-51828148)
chr3 (1-122)||(52236888-52237007)
chr3 (31-122)||(25534991-25535082)
chr3 (31-122)||(46013777-46013868)
chr3 (31-122)||(47431797-47431888)
chr3 (31-122)||(51473210-51473301)
chr3 (31-105)||(55389705-55389779)
chr3 (1-122)||(38535650-38535769)
chr3 (31-122)||(14654546-14654637)
chr3 (31-122)||(32730744-32730835)
chr3 (31-122)||(39010175-39010265)
chr3 (31-122)||(40275449-40275540)
chr3 (31-122)||(43678395-43678486)
chr3 (31-122)||(51828640-51828731)
chr3 (31-120)||(51828314-51828403)
chr3 (1-122)||(22370668-22370788)
chr3 (1-122)||(32730461-32730580)
chr3 (1-122)||(40839007-40839126)
chr3 (31-123)||(52375685-52375777)
chr3 (31-122)||(40275195-40275286)
chr3 (31-122)||(40838752-40838843)
chr3 (31-122)||(49720471-49720562)
chr3 (35-122)||(49951650-49951737)
chr3 (31-122)||(52237172-52237263)
chr3 (31-113)||(30513822-30513904)
chr3 (33-122)||(2044373-2044462)
chr3 (54-122)||(43222744-43222812)
chr3 (35-122)||(44676827-44676914)
chr3 (31-123)||(2051399-2051491)
chr3 (50-122)||(14654310-14654382)
chr3 (31-99)||(38535409-38535477)
chr3 (54-122)||(43222513-43222581)
chr3 (1-122)||(52375399-52375518)
chr3 (31-122)||(16701144-16701235)
chr3 (31-122)||(34104738-34104828)
chr3 (31-114)||(43678647-43678730)
chr3 (31-122)||(44676572-44676663)
chr3 (31-88)||(8873791-8873847)
chr3 (50-122)||(50900883-50900955)
chr3 (50-122)||(55192236-55192308)
chr3 (66-122)||(20840695-20840751)
chr3 (74-122)||(49720726-49720774)
[»] chr8 (28 HSPs)
chr8 (31-122)||(9796826-9796917)
chr8 (31-122)||(35427167-35427258)
chr8 (34-122)||(35694225-35694313)
chr8 (31-122)||(7910971-7911062)
chr8 (1-122)||(41260616-41260735)
chr8 (31-122)||(5731167-5731258)
chr8 (31-122)||(18049691-18049782)
chr8 (31-114)||(28254789-28254872)
chr8 (31-122)||(34799180-34799271)
chr8 (31-122)||(34799438-34799529)
chr8 (31-122)||(9797081-9797172)
chr8 (31-122)||(28254526-28254617)
chr8 (32-122)||(35693971-35694061)
chr8 (45-122)||(18049946-18050023)
chr8 (45-122)||(35426927-35427004)
chr8 (31-122)||(16578451-16578542)
chr8 (31-122)||(18428116-18428207)
chr8 (35-122)||(42035876-42035963)
chr8 (48-122)||(35163815-35163889)
chr8 (34-122)||(5730920-5731007)
chr8 (1-122)||(26252881-26253000)
chr8 (31-122)||(599632-599723)
chr8 (31-122)||(599853-599944)
chr8 (35-122)||(2208819-2208906)
chr8 (45-122)||(6115465-6115542)
chr8 (31-102)||(15256203-15256274)
chr8 (71-122)||(7910757-7910808)
chr8 (52-122)||(42036126-42036196)
[»] chr2 (40 HSPs)
chr2 (1-122)||(4355827-4355946)
chr2 (31-122)||(6949552-6949643)
chr2 (31-122)||(5560905-5560996)
chr2 (31-122)||(43160110-43160201)
chr2 (31-122)||(43215809-43215900)
chr2 (1-122)||(33920684-33920803)
chr2 (31-122)||(11539738-11539829)
chr2 (31-122)||(13399775-13399866)
chr2 (31-122)||(16175704-16175795)
chr2 (31-122)||(16953289-16953380)
chr2 (31-122)||(38008306-38008397)
chr2 (31-122)||(42192597-42192688)
chr2 (1-128)||(15550745-15550871)
chr2 (33-122)||(4808981-4809070)
chr2 (1-122)||(38008022-38008142)
chr2 (31-122)||(63057-63148)
chr2 (31-122)||(4809234-4809325)
chr2 (31-122)||(11539993-11540084)
chr2 (35-122)||(20128092-20128179)
chr2 (31-122)||(32418257-32418348)
chr2 (31-122)||(43160365-43160456)
chr2 (32-122)||(22445741-22445831)
chr2 (1-122)||(16953007-16953128)
chr2 (1-122)||(17060978-17061099)
chr2 (31-112)||(33920976-33921057)
chr2 (31-122)||(13315596-13315688)
chr2 (31-122)||(63313-63404)
chr2 (31-122)||(9330149-9330240)
chr2 (31-122)||(43216064-43216155)
chr2 (31-114)||(44219744-44219827)
chr2 (48-122)||(4356111-4356185)
chr2 (1-122)||(42192312-42192431)
chr2 (35-122)||(9329985-9330071)
chr2 (31-122)||(15551029-15551120)
chr2 (31-122)||(20127837-20127928)
chr2 (1-88)||(13399494-13399579)
chr2 (49-122)||(44219998-44220071)
chr2 (46-122)||(649642-649717)
chr2 (74-122)||(6949807-6949855)
chr2 (50-122)||(28143385-28143457)
[»] chr4 (42 HSPs)
chr4 (31-122)||(35643667-35643758)
chr4 (31-122)||(54440669-54440760)
chr4 (32-122)||(26974385-26974475)
chr4 (45-122)||(46736769-46736846)
chr4 (1-122)||(14439900-14440019)
chr4 (31-122)||(24851565-24851656)
chr4 (31-122)||(28166104-28166195)
chr4 (31-122)||(28465181-28465272)
chr4 (31-122)||(41608475-41608566)
chr4 (32-122)||(21034337-21034427)
chr4 (31-123)||(12593377-12593469)
chr4 (34-122)||(36168686-36168774)
chr4 (31-122)||(14440183-14440274)
chr4 (31-122)||(34789737-34789828)
chr4 (31-122)||(34807494-34807585)
chr4 (1-122)||(45838619-45838738)
chr4 (35-122)||(55677312-55677399)
chr4 (45-111)||(12593138-12593204)
chr4 (31-120)||(34807217-34807306)
chr4 (31-123)||(19529047-19529139)
chr4 (1-122)||(24851820-24851940)
chr4 (1-122)||(46737010-46737129)
chr4 (52-123)||(229282-229353)
chr4 (35-122)||(28465436-28465523)
chr4 (31-122)||(33689928-33690019)
chr4 (31-122)||(34789482-34789573)
chr4 (31-122)||(36168432-36168523)
chr4 (31-114)||(41114259-41114342)
chr4 (31-122)||(45838902-45838993)
chr4 (31-122)||(56077679-56077770)
chr4 (49-123)||(18965490-18965564)
chr4 (47-123)||(229513-229589)
chr4 (31-119)||(21034594-21034682)
chr4 (1-122)||(35193380-35193498)
chr4 (31-122)||(54440924-54441015)
chr4 (45-122)||(16214850-16214927)
chr4 (51-122)||(6616793-6616864)
chr4 (1-88)||(19528941-19529027)
chr4 (74-122)||(6617027-6617075)
chr4 (77-122)||(33777768-33777813)
chr4 (218-270)||(10246979-10247031)
chr4 (50-122)||(17504092-17504164)
[»] chr1 (41 HSPs)
chr1 (31-122)||(21938663-21938754)
chr1 (1-122)||(34555735-34555856)
chr1 (31-122)||(1837605-1837696)
chr1 (31-122)||(37505423-37505514)
chr1 (31-121)||(17641720-17641810)
chr1 (45-122)||(17641479-17641556)
chr1 (1-122)||(37421232-37421353)
chr1 (1-122)||(8229996-8230115)
chr1 (1-122)||(30786844-30786963)
chr1 (31-122)||(1744427-1744518)
chr1 (1-122)||(34555451-34555572)
chr1 (31-122)||(44582412-44582504)
chr1 (31-122)||(9992255-9992346)
chr1 (31-122)||(16299037-16299128)
chr1 (31-122)||(23340283-23340374)
chr1 (31-114)||(44954589-44954672)
chr1 (31-122)||(52335865-52335956)
chr1 (32-122)||(4080122-4080212)
chr1 (31-122)||(8229740-8229831)
chr1 (31-122)||(29021219-29021309)
chr1 (35-122)||(30787127-30787214)
chr1 (31-122)||(50305137-50305228)
chr1 (32-114)||(6224800-6224882)
chr1 (32-122)||(10278905-10278995)
chr1 (31-121)||(23526758-23526847)
chr1 (31-110)||(443918-443997)
chr1 (31-122)||(9992510-9992601)
chr1 (1-121)||(10278620-10278739)
chr1 (31-114)||(44954326-44954409)
chr1 (74-123)||(29439285-29439334)
chr1 (49-122)||(50926596-50926669)
chr1 (31-119)||(44582157-44582245)
chr1 (31-122)||(29439031-29439122)
chr1 (31-122)||(37505168-37505259)
chr1 (31-122)||(50304882-50304973)
chr1 (49-122)||(9833507-9833580)
chr1 (1-122)||(16298754-16298873)
chr1 (31-106)||(2868079-2868154)
chr1 (61-122)||(4636102-4636163)
chr1 (50-122)||(17088269-17088341)
chr1 (50-122)||(50926351-50926423)
[»] scaffold0712 (2 HSPs)
scaffold0712 (31-122)||(6492-6583)
scaffold0712 (45-122)||(6746-6823)
[»] scaffold0709 (2 HSPs)
scaffold0709 (31-122)||(6510-6601)
scaffold0709 (45-122)||(6764-6841)
[»] scaffold0097 (2 HSPs)
scaffold0097 (31-122)||(46367-46458)
scaffold0097 (49-122)||(46622-46695)
[»] scaffold0025 (1 HSPs)
scaffold0025 (31-120)||(78417-78506)
[»] scaffold0108 (1 HSPs)
scaffold0108 (50-80)||(15231-15261)
[»] scaffold0007 (1 HSPs)
scaffold0007 (50-122)||(205723-205795)


Alignment Details
Target: chr6 (Bit Score: 132; Significance: 2e-68; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 218 - 357
Target Start/End: Complemental strand, 3827614 - 3827475
Alignment:
Q  218 ataaattgtcgttttcttattattgagtcaaaaagagtgttattattattattttcattgagagacttgttagtaagaaatattggtgattggactaaaa 317  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3827614 ataaattgtcgttttcttattattgagtcaaaaagagtattattattattattttcattgagagacttgttagtaagaaatattggtgagtggactaaaa 3827515  T
Q  318 aagagtagtgggcttgagcaaaggaaaataaaaacgtaac 357  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  3827514 aagagtagtgggcttgagcaaaggaaaataaaaacgtaac 3827475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 28636642 - 28636551
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||| |||||||||||| ||||| || |||||||||||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  28636642 gcagttttagtcttatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 28636551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 5114568 - 5114659
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || |||| ||||||||||||||||| |||||||||||||||| |||||||| |||||||    
T  5114568 gcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttagttcaaccacctatgctcaaccatgaaataaa 5114659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 31073588 - 31073497
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || |||||||||||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  31073588 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 31073497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 25468921 - 25469042
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        ||||||||||||  ||||||||||||| || | || |||||||||||||||||||||| | | |||||||    
T  25468921 aaaatcgtccctaaactatatgtttttcttgcagttttagtcctatctccctattttaaattccagaaacgcacagaaatgacagttttattccaaccac 25469020  T
Q  101 ctatgttcaaccataaaataaa 122  Q
    ||||| |||||||| |||||||    
T  25469021 ctatgctcaaccatgaaataaa 25469042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 31574199 - 31574080
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        ||||||||||||  |||||||||||||||||| || ||||||||| |||||||| ||| ||| |||||||    
T  31574199 aaaatcgtccctaaactatatgtttttt--gcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacaattttagtccaaccac 31574102  T
Q  101 ctatgttcaaccataaaataaa 122  Q
    ||||| |||||||| |||||||    
T  31574101 ctatgctcaaccatgaaataaa 31574080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 24640631 - 24640540
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||| |||||||||||| ||||| |  |||||||||||||||||||||  ||| |||||||||||| |||||||| |||||||    
T  24640631 gcagttttagtcttatctccctatttccaactccgaaaacgcacagaaatgacagttctagtccaaccacctatgctcaaccatgaaataaa 24640540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 25472458 - 25472367
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| || || || |||||||||||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  25472458 gcagttttagtcctatctccctatttccagctccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 25472367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 31573825 - 31573916
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || ||||||| |||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  31573825 gcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 31573916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 122
Target Start/End: Complemental strand, 30251135 - 30251046
Alignment:
Q  33 agttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||| |||||||||||| ||||| || ||||||||||||||||||| || ||| |||||||||||  |||||||| |||||||    
T  30251135 agttttagtcttatctccctatttccaactccagaaacgcacagaaatgacagatttagtccaaccacctatcctcaaccatgaaataaa 30251046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 29891526 - 29891435
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || |||||||||||||||| ||||| ||| |||||||||||  |||||||| |||||||    
T  29891526 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgatagttttagtccaaccacctatactcaaccatgaaataaa 29891435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 29891194 - 29891271
Alignment:
Q  45 atctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||||| ||||| || ||||||||| |||||||||||| ||| |||||||||||| |||||||| |||||||    
T  29891194 atctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 29891271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 5120943 - 5120858
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagttt 88  Q
    ||||||||||||||||||||||        ||||||||||||  |||||||||||| ||||| |||||||||||||||||||||||||    
T  5120943 aaaatcgtccctaaactatatgtttttt--gcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttt 5120858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 122
Target Start/End: Original strand, 30250806 - 30250882
Alignment:
Q  46 tctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||| ||||| || |||||||||||||||||||||| ||| ||| ||| |||| |||| ||| |||||||    
T  30250806 tctccctatttccaactacagaaacgcacagaaatgacagttttagtccaatcacttatgctcaatcatgaaataaa 30250882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 123
Target Start/End: Original strand, 11523806 - 11523876
Alignment:
Q  52 tattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaat 123  Q
    ||||||||||| |||||||||||| ||||  |||||  ||| |||||| |||||||||||||| ||||||||    
T  11523806 tattttcaactccataaacgcacaaaaattgcagttctagtccaacca-ctatgttcaaccatgaaataaat 11523876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 4e-66; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 218 - 357
Target Start/End: Original strand, 30764073 - 30764212
Alignment:
Q  218 ataaattgtcgttttcttattattgagtcaaaaagagtgttattattattattttcattgagagacttgttagtaagaaatattggtgattggactaaaa 317  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30764073 ataaattgtcgttttcttattattgagtcaaaaagagtattattattattattttcattgagagacttgttagtaagaaatattggtgagtggactaaaa 30764172  T
Q  318 aagagtagtgggcttgagcaaaggaaaataaaaacgtaac 357  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  30764173 aagagtggtgggcttgagcaaaggaaaataaaaacgtaac 30764212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 218 - 357
Target Start/End: Original strand, 30761250 - 30761391
Alignment:
Q  218 ataaattgtcgttttcttattattgagtcaaaaagagtgttat---tattattattttcattgagagacttgttagtaagaaatattggtgattggacta 314  Q
    |||||||||||||||||||||||||||||||||||||| ||||   |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  30761250 ataaattgtcgttttcttattattgagtcaaaaagagtattattattattattattttcattgagagacttgttagtaagaaatattggtgagtggacta 30761349  T
Q  315 aaaaagagtagtgggcttgagcaaaggaaaataaaaacgtaac 357  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  30761350 aaaaagagtagt-ggcttgagcaaaggaaaataaaaacgtaac 30761391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 5161683 - 5161774
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||| |||| ||||||| |||||||| ||||||| |||||||||||||| |||||||||||||||| |||||||| |||||||    
T  5161683 gcagttttagtcttatcttcctatttccaacttcaaaaacgcatagaaatgacagttttagttcaaccacctatgctcaaccatgaaataaa 5161774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 28289785 - 28289875
Alignment:
Q  32 cagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||||  |||||||||||| ||||| || |||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||    
T  28289785 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgttcaaccatgaaataaa 28289875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 18150169 - 18150078
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || ||||||||| ||||||| |||| |||||||||||||||| ||||||||||||||||    
T  18150169 gcagttttagtcctatctccctatttccaactccagaaacgcacataaatgaccgttttagttcaaccacctatgctcaaccataaaataaa 18150078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 19291457 - 19291548
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||| |||||| ||||| ||||| ||||||||||||||||||||||||| ||| |||||||||||| |||| ||| |||||||    
T  19291457 gcagttttagtcttatctccttatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgctcaatcatgaaataaa 19291548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 21371170 - 21371051
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        ||| ||||||||  |||||||||||| ||||| || ||||||||| |||||||||||| |||||||||||    
T  21371170 aaaatcgtccctaaactatatgtttttt--gcaattttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagttcaaccac 21371073  T
Q  101 ctatgttcaaccataaaataaa 122  Q
    ||||| |||||||| |||||||    
T  21371072 ctatgctcaaccatgaaataaa 21371051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 28290090 - 28289999
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || |||||||||||||||||||||| ||| |||||| ||||| |||||||| |||||||    
T  28290090 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccatctatgctcaaccatgaaataaa 28289999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 123
Target Start/End: Original strand, 22651445 - 22651537
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaat 123  Q
    ||||||||||||  | |||| ||||||||||| || ||||||||| ||||| |||||| ||| |||||||||||| |||||||| ||||||||    
T  22651445 gcagttttagtcctacctccttattttcaactccagaaacgcacaaaaatggcagttttagtccaaccacctatgctcaaccatgaaataaat 22651537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 38900744 - 38900833
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| |||||||| ||| |||||||||||  ||| |||||||||||| |||||||| |||||||    
T  38900744 gcagttttagtcctatctccctatttccaactccataaacgtacataaatgacagtt--agtccaaccacctatgctcaaccatgaaataaa 38900833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 8419067 - 8418976
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || |||||||||||||||||| ||| | | ||| |||||||| |||||||| |||||||    
T  8419067 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttaatccaaacacctatgctcaaccatgaaataaa 8418976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 15115541 - 15115450
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  ||| |||||||| |||||  | ||||||||| |||||||||||| ||||||||||| |||| |||||||| |||||||    
T  15115541 gcagttttagtcatatcgccctatttccaactcaaaaaacgcacataaatgacagttttagttcaaccacatatgctcaaccatgaaataaa 15115450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 15029755 - 15029672
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccat 114  Q
    |||||||||||   ||||||||||||  |||| || ||||||||| |||||||||||| ||| |||||||||||| ||||||||    
T  15029755 gcagttttagttcgatctccctatttcaaactccagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccat 15029672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 22651758 - 22651699
Alignment:
Q  64 cataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaat 123  Q
    |||||||||||| |||||||||||| ||| |||||||||||| |||||||| ||||||||    
T  22651758 cataaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaat 22651699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 14340480 - 14340571
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||| ||  ||||| |||||| |||||  | ||||  |||||||||||||||| ||| ||||||| ||||||||||||| |||||||    
T  14340480 gcagttttaatcctatctctctatttccaactctagaaacctacagaaatgacagttttagtccaaccacttatgttcaaccatgaaataaa 14340571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 32697669 - 32697578
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||||   | |||||||||| ||||| || |||| |||||||||||||  || ||| |||||||||||| |||||||| |||||||    
T  32697669 gcagttttagtgatacctccctatttccaactccagaaacacacagaaatgacaaatttagtccaaccacctatgctcaaccatgaaataaa 32697578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 39083460 - 39083551
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||| ||||| ||||| || |||| ||||||||||||||||| ||| ||| ||| |||| |||| ||| |||||||    
T  39083460 gcagttttagtcatatctccatatttccaactccagaaacacacagaaatgacagttttagtccaatcacatatgctcaatcatgaaataaa 39083551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 122
Target Start/End: Complemental strand, 14340851 - 14340762
Alignment:
Q  33 agttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||  |||||| ||||| ||||| || ||||| | |||||||||||||| |||  |||||  |||| |||||||| |||||||    
T  14340851 agttttagtcctatctccttatttccaactccaaaaacgtagagaaatgacagttttagtcaaaccatttatgctcaaccatgaaataaa 14340762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 27307161 - 27307217
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagttt 88  Q
    ||||||||||||| | |||| ||||||||||| || ||||||| ||||||||||||||    
T  27307161 gcagttttagtcttacctcc-tattttcaactccagaaacgcatagaaatgacagttt 27307217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 1811264 - 1811212
Alignment:
Q  218 ataaattgtcgttttcttattattgagtcaaaaagagtgttattattattatt 270  Q
    |||||||||| ||||||||||||||||||||  || || |||||| |||||||    
T  1811264 ataaattgtcattttcttattattgagtcaattagtgtattattactattatt 1811212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 27307485 - 27307413
Alignment:
Q  50 cctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||| || ||| ||| |||||||||| ||| || || ||| |||||| |||||||| |||||||    
T  27307485 cctattttcaactccagaaatgcagagaaatgacatttttagatccaccccctatgctcaaccatgaaataaa 27307413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 38901086 - 38900997
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||||   |||||| ||||| ||||  || ||||||||| |||||||||||| ||| |||||| |||  ||||||||| |||||||    
T  38901086 gcagttttagttatatctccttatttccaac--cagaaacgcacataaatgacagttttagtccaaccatctaatttcaaccatgaaataaa 38900997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 120; Significance: 2e-61; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 218 - 357
Target Start/End: Complemental strand, 5827556 - 5827417
Alignment:
Q  218 ataaattgtcgttttcttattattgagtcaaaaagagtgttattattattattttcattgagagacttgttagtaagaaatattggtgattggactaaaa 317  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||    
T  5827556 ataaattgtcgttttcttgttattgagtcaaaaagagtattattattattattttcattgagagacttgctagtaagaaacattggtgagtggactaaaa 5827457  T
Q  318 aagagtagtgggcttgagcaaaggaaaataaaaacgtaac 357  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5827456 aagagtagtgggcttgagcaaaggaaaataaaaacgtaac 5827417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 26026418 - 26026509
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||| |||||||||||||||||| || |||||||||||||||||||||| ||||||||||| |||| |||||||| |||||||    
T  26026418 gcagttttagtcttatctccctattttcaactccagaaacgcacagaaatgacagttttagttcaaccacatatgctcaaccatgaaataaa 26026509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 786883 - 786974
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| ||||||||||||||| ||||||||| |||||||||||||||| |||||||| |||||||    
T  786883 gcagttttagtcctatctccctatttccaactccataaacgcacagaagtgacagttttagttcaaccacctatggtcaaccatgaaataaa 786974  T

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Target: chr7; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 7732588 - 7732679
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||||||||| |||||||||||| |||||||||||| ||| |||||||||||| |||||||| |||||||    
T  7732588 gcagttttagtcctatctccctattttcaactccataaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 7732679  T

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Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 48248037 - 48247946
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||||| ||||||||||||| ||||| || |||||||||||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  48248037 gcagttttagtcccatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 48247946  T

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Target: chr7; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 5745739 - 5745830
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||| |||||||||||| | ||| || ||||||||| |||||||||||| ||| |||||||||||| |||||||| |||||||    
T  5745739 gcagttttagtcttatctccctatttcctactccagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 5745830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 11973848 - 11973757
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||||   |||| ||||||| |||||||| |||||||||||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  11973848 gcagttttagttctatcttcctatttccaacttcagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 11973757  T

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Target: chr7; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 14311733 - 14311642
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||| |||||||||||| |||||  | |||||||||||||||||| ||| ||| |||||||||||||| |||||| |||||||    
T  14311733 gcagttttagtcttatctccctatttccaactctagaaacgcacagaaatgacaattttagtccaaccacctatgtttaaccatgaaataaa 14311642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 16081745 - 16081654
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || ||||||||| |||||||||||| ||| ||||||| ||||||||||||| |||||||    
T  16081745 gcagttttagtcctatctccctatttccaactccaaaaacgcacaaaaatgacagttttagtccaaccacttatgttcaaccatgaaataaa 16081654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 25637644 - 25637553
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || |||| ||||||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  25637644 gcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 25637553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 26026764 - 26026673
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||| | |||||||||||| ||||| || ||||||| |||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  26026764 gcagttttagttttatctccctatttccaactccaaaaacgcatagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 26026673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 26048393 - 26048302
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || ||| ||||| |||||||||||| ||| ||||||||||||||||||||| |||||||    
T  26048393 gcagttttagtcatatctccctatttccaactccaaaaatgcacataaatgacagttttagtccaaccacctatgttcaaccatgaaataaa 26048302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 48247691 - 48247782
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || |||||||||||||||||||||| ||| |||||||||||| ||| |||| |||||||    
T  48247691 gcagttttagtcatatctccctatttccaactccaaaaacgcacagaaatgacagttttagtccaaccacctatgctcatccatgaaataaa 48247782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 9181854 - 9181764
Alignment:
Q  32 cagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||||  |||||||||||| ||||| || ||||||||| |||||||||||| ||| |||||||||||| |||||||| |||||||    
T  9181854 cagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 9181764  T

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Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 120
Target Start/End: Complemental strand, 24929749 - 24929660
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaata 120  Q
    ||||||||||||  |||||||||||| ||||| || |||||||||||||||||||||| ||| |||| ||||||| |||||||| |||||    
T  24929749 gcagttttagtcctatctccctatttccaactccaaaaacgcacagaaatgacagttttagtccaacgacctatgctcaaccatgaaata 24929660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 28687973 - 28687854
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        ||| ||||||||  |||| ||||||| ||||| || |||||||||||||||||||||| ||| |||||||    
T  28687973 aaaatcgtccctaaactatatgtttttt--gcacttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagttttagtccaaccac 28687876  T
Q  101 ctatgttcaaccataaaataaa 122  Q
    ||||| |||||||| |||||||    
T  28687875 ctatgctcaaccatgaaataaa 28687854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 5746081 - 5745994
Alignment:
Q  35 ttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||| |||||||||||| ||||| |||||||||||| |||||||||||| ||| ||| |||||||| | |||||| |||||||    
T  5746081 ttttagtcttatctccctatttccaactccataaacgcacataaatgacagttttagtccaatcacctatgcttaaccatgaaataaa 5745994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 9181632 - 9181711
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaa 110  Q
    ||||||||||||  |||||||||||| ||||| || |||||||||||||||||||||| ||| |||||||||||| ||||    
T  9181632 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaa 9181711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 27245304 - 27245395
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||| ||||| ||||| || |||||||||||||||| ||||| ||| |||||||||||| |||||||| |||||||    
T  27245304 gcagttttagtcctatctccttatttccaactccagaaacgcacagaaatgatagttttagtccaaccacctatgctcaaccatgaaataaa 27245395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 48 - 122
Target Start/End: Original strand, 26048065 - 26048139
Alignment:
Q  48 tccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||| ||||| || |||||||||||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  26048065 tccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 26048139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 39388713 - 39388621
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcac-agaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||||||||| || |||||||| | |||||||||||| ||| ||||||| |||| |||||||| |||||||    
T  39388713 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaaatgacagttttagtccaaccacatatgctcaaccatgaaataaa 39388621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 7732929 - 7732842
Alignment:
Q  35 ttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||  |||||||||||||||||| |||||| |||||||||| ||| ||  ||| |||||||||||| |||||||| |||||||    
T  7732929 ttttagtcctatctccctattttcaactccataaatgcacagaaataacaattctagtccaaccacctatgctcaaccatgaaataaa 7732842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 16081399 - 16081490
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||| ||||||| ||||| || |||| ||||||||||||||||| ||| ||||||| |||| |||||||| |||||||    
T  16081399 gcagttttagtcctatctacctatttccaactccaaaaacacacagaaatgacagttttagtccaaccacatatgctcaaccatgaaataaa 16081490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 27245646 - 27245559
Alignment:
Q  35 ttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||  |||||||||||| ||||| || |||||||||||||| | ||||| ||| |||||||||||| |||||||| |||||||    
T  27245646 ttttagtcatatctccctatttccaactccagaaacgcacagaaatcatagttttagtccaaccacctatgctcaaccatgaaataaa 27245559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 122
Target Start/End: Complemental strand, 34595197 - 34595127
Alignment:
Q  52 tattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||| || |||||||||||||||||||||| ||| |||||||| ||| |||||||| |||||||    
T  34595197 tattttcaactccagaaacgcacagaaatgacagttttagtccaaccacccatgctcaaccatgaaataaa 34595127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 33 - 122
Target Start/End: Complemental strand, 787226 - 787137
Alignment:
Q  33 agttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||| |||| | ||||||||||| || ||||||||| |||||| ||||| ||| ||||||| |||| |||||||| |||||||    
T  787226 agttttagtcttatcttcatattttcaactccagaaacgcacataaatgatagttttagtccaaccacatatgctcaaccatgaaataaa 787137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 33 - 122
Target Start/End: Original strand, 15712467 - 15712556
Alignment:
Q  33 agttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||  |||||||||||| |||||  | ||||||||| |||||||||||| ||| ||||||| |||| |||||||| |||||||    
T  15712467 agttttagtcctatctccctatttccaactctagaaacgcacataaatgacagttttagtccaaccacatatgctcaaccatgaaataaa 15712556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 33 - 122
Target Start/End: Original strand, 25637300 - 25637389
Alignment:
Q  33 agttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||  |||||||||||| ||||| || ||||||||| |||||||||||| |   |||||||||||| |||||||| |||||||    
T  25637300 agttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttaagccaaccacctatgctcaaccatgaaataaa 25637389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 14311417 - 14311497
Alignment:
Q  32 cagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaacc 112  Q
    |||||||| ||  |||||||||||| ||||| ||||||| |||| |||||||||||| ||| |||||||||||| ||||||    
T  14311417 cagttttaatcctatctccctatttccaactccataaacacacataaatgacagttttagtccaaccacctatgctcaacc 14311497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 35161276 - 35161156
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        ||||||||||||  |||||||||||| ||||| |||||||||||| |||||| |||||  |  | |||||    
T  35161276 aaaatcgtccctaaactatatgttttttt-gcagttttagtcatatctccctatttccaactccataaacgcacataaatgatagttttgggccgaccac 35161178  T
Q  101 ctatgttcaaccataaaataaa 122  Q
    ||||| |||||||| |||||||    
T  35161177 ctatgctcaaccatgaaataaa 35161156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 33881030 - 33880940
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||| ||| |||||||||||||| || ||||||||| |||||||||||| |||   | | |||||| |||||||| |||||||    
T  33881030 gcagttttagtcttatc-ccctattttcaactccagaaacgcacataaatgacagttttagtcatatcccctatgctcaaccatgaaataaa 33880940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 122
Target Start/End: Original strand, 35160906 - 35160992
Alignment:
Q  35 ttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||  |||||||||||||||||| || |  ||||||||||||| ||||| ||| ||||||||||||  ||||||| |||||||    
T  35160906 ttttagtcctatctccctattttcaactccagag-cgcacagaaatgatagttttagtccaaccacctatgcccaaccatgaaataaa 35160992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 11971439 - 11971529
Alignment:
Q  32 cagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||||  |||||||||||| ||| |  | |||| |||| |||||||||||| ||| |||||||||||| ||||| || |||||||    
T  11971439 cagttttagtcctatctccctatttccaattctagaaacacacataaatgacagttttagtccaaccacctatgctcaacaatgaaataaa 11971529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 122
Target Start/End: Original strand, 34594700 - 34594773
Alignment:
Q  49 ccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||||  | ||||  ||| |||||| ||||| ||| |||||||||||| ||||||||||||||||    
T  34594700 ccctattttcaactcgagaaacaaacataaatgatagttttagtccaaccacctatgctcaaccataaaataaa 34594773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 5184498 - 5184546
Alignment:
Q  35 ttttagtctcatctccctattttcaacttcataaacgcacagaaatgac 83  Q
    ||||||||| |||||||||||| ||||| || ||| |||||||||||||    
T  5184498 ttttagtcttatctccctatttccaactccaaaaatgcacagaaatgac 5184546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 5334013 - 5334061
Alignment:
Q  74 cagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||||| ||| |||| ||||||| |||||||| |||||||    
T  5334013 cagaaatgacagttttagtccaactacctatgctcaaccatgaaataaa 5334061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 2e-61; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 218 - 357
Target Start/End: Original strand, 44508069 - 44508208
Alignment:
Q  218 ataaattgtcgttttcttattattgagtcaaaaagagtgttattattattattttcattgagagacttgttagtaagaaatattggtgattggactaaaa 317  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||    
T  44508069 ataaattgtcgtttttttattattgagtcaaaaagagtattattattattattttcattgagagacttgctagtaagaaacattggtgagtggactaaaa 44508168  T
Q  318 aagagtagtgggcttgagcaaaggaaaataaaaacgtaac 357  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  44508169 aagagtagtgggcttgagcaaaggaaaataaaaacgtaac 44508208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 34105124 - 34105003
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        |||||||||||| ||||||| ||||| |||||||| |||||||||||||||||||||| ||| |||||||    
T  34105124 aaaatcgtccctaaactatatgttttttttgcagttttagtcccatctccttatttccaacttcagaaacgcacagaaatgacagttttagtccaaccac 34105025  T
Q  101 ctatgttcaaccataaaataaa 122  Q
    ||||| |||||||| |||||||    
T  34105024 ctatgctcaaccatgaaataaa 34105003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 51472955 - 51473046
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||    
T  51472955 gcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgttcaaccatgaaataaa 51473046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 51828986 - 51828895
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| |||||||||||||||||| |||||||||||| ||| |||||||||||| |||||||| |||||||    
T  51828986 gcagttttagtcctatctccctatttccaacttcataaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 51828895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 122
Target Start/End: Complemental strand, 55390041 - 55389952
Alignment:
Q  33 agttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||  | |||||||||| ||||| ||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||    
T  55390041 agttttagtcctacctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgctcaaccataaaataaa 55389952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 41998330 - 41998421
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| |||||||| |||||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  41998330 gcagttttagtcatatctccctatttccaactccataaacgaacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 41998421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 49951992 - 49951901
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||||||||| || ||||||||| |||||||||||| ||| |||||||||||| |||||||| |||||||    
T  49951992 gcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 49951901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 50662858 - 50662767
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  | |||||||||||||||| || |||||||||||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  50662858 gcagttttagtcctagctccctattttcaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 50662767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 330310 - 330191
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        ||||||||||||  |||||||||||| |||||  | |||||||||||||||||||||| | | |||||||    
T  330310 aaaatcgtccctaaactatatgtttttt--gcagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttaatccaaccac 330213  T
Q  101 ctatgttcaaccataaaataaa 122  Q
    ||||| ||||||||||||||||    
T  330212 ctatgctcaaccataaaataaa 330191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 123
Target Start/End: Original strand, 46013522 - 46013614
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaat 123  Q
    ||||||||||||  |||||||||||||||||| || ||||||||| ||||||| |||| ||| |||||||||||| |||||||| ||||||||    
T  46013522 gcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacggttttagtccaaccacctatgctcaaccatgaaataaat 46013614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 51828029 - 51828148
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        ||| ||||||||  |||||||||||||||||| || ||||||||| |||||||||||| ||| |||||||    
T  51828029 aaaatcgtccctaaactatatgtttttt--gcatttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccac 51828126  T
Q  101 ctatgttcaaccataaaataaa 122  Q
    ||||| |||||||| |||||||    
T  51828127 ctatgctcaaccatgaaataaa 51828148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 52236888 - 52237007
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        ||||||||||||  ||| |||||||||||||| || |||||||||||||||||||||| ||| ||| |||    
T  52236888 aaaatcgtccctaaactatatgtttttt--gcagttttagtcatatccccctattttcaactccagaaacgcacagaaatgacagttttagtccaatcac 52236985  T
Q  101 ctatgttcaaccataaaataaa 122  Q
    ||||| |||||||| |||||||    
T  52236986 ctatgctcaaccatgaaataaa 52237007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 25534991 - 25535082
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || ||||||||| |||||||||||| ||| |||||||||||| |||||||| |||||||    
T  25534991 gcagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 25535082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 46013868 - 46013777
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || ||||||||| |||||||||||| ||| |||||||||||| |||||||| |||||||    
T  46013868 gcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 46013777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 47431797 - 47431888
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  ||||||||||||  |||| || |||||||||||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  47431797 gcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 47431888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 51473301 - 51473210
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || ||||||||| |||||||||||| ||| |||||||||||| |||||||| |||||||    
T  51473301 gcagttttagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 51473210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 55389705 - 55389779
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatg 105  Q
    ||||||||||||  |||||||||||| ||||| || |||||||||||||||||||||| ||||||||||||||||    
T  55389705 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagttcaaccacctatg 55389779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 38535769 - 38535650
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        ||||||||||||  |||||||||||| ||||| || ||||||||| |||| ||||||| ||| |||||||    
T  38535769 aaaatcgtccctaaactatatgtttttt--gcagttttagtcctatctccctatttccaactccagaaacgcacataaattacagttttagtccaaccac 38535672  T
Q  101 ctatgttcaaccataaaataaa 122  Q
     ||||||||||||| |||||||    
T  38535671 atatgttcaaccatgaaataaa 38535650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 14654637 - 14654546
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||| ||||| ||||| || ||||||||| |||||||||||| |||||||||| ||||| |||||||| |||||||    
T  14654637 gcagttttagtcctatctccttatttccaactccagaaacgcacataaatgacagttttagttcaaccatctatgctcaaccatgaaataaa 14654546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 32730835 - 32730744
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||| ||  ||||||||||||  |||| || |||||||||||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  32730835 gcagttttaatcctatctccctatttcaaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 32730744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 39010175 - 39010265
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||||| ||||||||||||||||||| |||||| ||||| |||||| ||||| ||| ||||||| |||| |||||||| |||||||    
T  39010175 gcagttttagtcacatctccctattttcaactccataaa-gcacataaatgatagttttagtccaaccacatatgctcaaccatgaaataaa 39010265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 40275540 - 40275449
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  ||| |||||||| ||||| || ||||||||| |||||||||||| ||| |||||||||||| |||||||| |||||||    
T  40275540 gcagttttagtcatatccccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 40275449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 43678395 - 43678486
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||| |||||||||||| ||||| || || |||||| |||||||||||| ||| |||||||||||| ||||| || |||||||    
T  43678395 gcagttttagtcttatctccctatttccaactccagaagcgcacataaatgacagttttagtccaaccacctatgctcaactatgaaataaa 43678486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 51828640 - 51828731
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || ||||||||| |||||||||||| ||| |||||| ||||| |||||||| |||||||    
T  51828640 gcagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccatctatgctcaaccatgaaataaa 51828731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 31 - 120
Target Start/End: Complemental strand, 51828403 - 51828314
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaata 120  Q
    ||||||||||||  |||||||||||| ||||| || ||||||| |||||||||||||| ||| |||| ||||||| |||||||| |||||    
T  51828403 gcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagttttagtccaactacctatgctcaaccatgaaata 51828314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 22370668 - 22370788
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        ||||||||||||  |||||| ||| | ||||| || |||||||||||||| ||||||| ||||||| | |    
T  22370668 aaaatcgtccctaaactatatgttttttt-gcagttttagtcctatctccttatctccaactccagaaacgcacagaaataacagttttagttcaatcgc 22370766  T
Q  101 ctatgttcaaccataaaataaa 122  Q
     |||||||||||||||||||||    
T  22370767 ttatgttcaaccataaaataaa 22370788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 32730461 - 32730580
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        ||||||||| ||  |||||||||||| |||||  | ||||||||| |||||||||||| ||||||| |||    
T  32730461 aaaatcgtccctaaactatatgtttttt--gcagttttaatcgtatctccctatttccaactctagaaacgcacataaatgacagttttagttcaatcac 32730558  T
Q  101 ctatgttcaaccataaaataaa 122  Q
    ||||| |||||||| |||||||    
T  32730559 ctatgctcaaccatgaaataaa 32730580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 40839126 - 40839007
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        ||||||||||||  ||||||||||||  |||| || |||||||||||||||||||||| ||| |||| ||    
T  40839126 aaaatcgtccctaaactatatgtttttt--gcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttagtccaactac 40839029  T
Q  101 ctatgttcaaccataaaataaa 122  Q
     |||| |||||||| |||||||    
T  40839028 atatgctcaaccatgaaataaa 40839007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 123
Target Start/End: Complemental strand, 52375777 - 52375685
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaat 123  Q
    ||||||||||||  ||  |||||||| ||||| || |||||||||||||||||||||| ||| ||||||| |||| |||||||| ||||||||    
T  52375777 gcagttttagtcatattcccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacttatgctcaaccatgaaataaat 52375685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 40275195 - 40275286
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||| |||||  |||| || |||||||||||||||||||||| ||| ||||||| |||| |||||||| |||||||    
T  40275195 gcagttttagtcctatctccatatttctaactccagaaacgcacagaaatgacagttttagtccaaccacatatgctcaaccatgaaataaa 40275286  T

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Target: chr3; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 40838752 - 40838843
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  ||| |||||||| ||||| || |||||||||||||||||||||| ||| |||||||||||  |||| ||| |||||||    
T  40838752 gcagttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctataatcaaacatgaaataaa 40838843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 49720471 - 49720562
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||| |||||  |||| || ||||||||| |||||||||||| ||| |||||||||||| |||||||| |||||||    
T  49720471 gcagttttagtcctatctccttatttctaactccagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 49720562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 122
Target Start/End: Original strand, 49951650 - 49951737
Alignment:
Q  35 ttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||  |||||||||||| ||||| |||||||||||| |||| ||||||| ||| ||||||| |||| |||||||| |||||||    
T  49951650 ttttagtcctatctccctatttccaactccataaacgcacataaataacagttttagtccaaccacatatgctcaaccatgaaataaa 49951737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 52237263 - 52237172
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  ||||||||||||  |||| |  |||||||||||||||||||||| |||  |||||| ||||||||||||| |||||||    
T  52237263 gcagttttagtcctatctccctatttctaactccggaaacgcacagaaatgacagttttagtcaaaccacatatgttcaaccatgaaataaa 52237172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 30513822 - 30513904
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaacca 113  Q
    ||||||||||||  |||||| |||||  ||||||| |||||||||||||||||||||| ||| || ||||||||| |||||||    
T  30513822 gcagttttagtcatatctccatatttcgaacttcagaaacgcacagaaatgacagttttagtccagccacctatgctcaacca 30513904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 33 - 122
Target Start/End: Original strand, 2044373 - 2044462
Alignment:
Q  33 agttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||  |||||||||||| |||||  | ||||||||| |||| ||||||| ||| |||||||||||||||||| || |||||||    
T  2044373 agttttagtcatatctccctatttccaactcaagaaacgcacataaataacagttttagtccaaccacctatgttcaactatgaaataaa 2044462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 43222812 - 43222744
Alignment:
Q  54 ttttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||| || ||||||||| |||||||||||| ||| |||||||| |||||||||||| |||||||    
T  43222812 ttttcaactccagaaacgcacaaaaatgacagttttagtccaaccacccatgttcaaccatgaaataaa 43222744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 44676914 - 44676827
Alignment:
Q  35 ttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||  ||||| |||||||||||| || ||||||||| |||||||||||| |||  ||||||||||| ||||| || |||||||    
T  44676914 ttttagtcctatctctctattttcaactccagaaacgcacataaatgacagttttagtctaaccacctatgctcaactatgaaataaa 44676827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 31 - 123
Target Start/End: Original strand, 2051399 - 2051491
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaat 123  Q
    ||||||||| ||  || |||||||||  |||| || ||||||||| |||||||||||| ||| |||||||||||| | |||||| ||||||||    
T  2051399 gcagttttattcctatttccctatttctaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgcttaaccatgaaataaat 2051491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 14654310 - 14654382
Alignment:
Q  50 cctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||| ||||| | ||||||||||||||||||||||| ||| |||||||| ||  |||||||| |||||||    
T  14654310 cctatttccaactccgtaaacgcacagaaatgacagttttagtccaaccaccaatactcaaccatgaaataaa 14654382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 38535409 - 38535477
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaacca 99  Q
    ||||||| ||||  |||||||||||| ||||| || ||||||||| |||||||||||| ||||||||||    
T  38535409 gcagtttcagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttagttcaacca 38535477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 43222513 - 43222581
Alignment:
Q  54 ttttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||| || ||||| ||| |||||||||||| ||| |||||||||||| |||||||| |||||||    
T  43222513 ttttcaactccagaaacgtacaaaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 43222581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 52375399 - 52375518
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        |||||||||||   ||||||||||||  |||| || ||||||| |||||||||||||| |||  ||||||    
T  52375399 aaaatcgtccctaaactatatgtttttt--gcagttttagttctatctccctatttctaactccagaaacgcatagaaatgacagttttagtctaaccac 52375496  T
Q  101 ctatgttcaaccataaaataaa 122  Q
     |||| |||||||| |||||||    
T  52375497 atatgctcaaccatgaaataaa 52375518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 16701235 - 16701144
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| ||||||||||  ||||| ||||||| ||| ||||| | ||||  ||||||| |||||||    
T  16701235 gcagttttagtcatatctccctatttccaactccataaacgcatcgaaattacagttttagtccaaccccttatgcccaaccatgaaataaa 16701144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 34104738 - 34104828
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||| ||||| || || || ||||||||| |||||||| ||| ||| |||||||||||| |||||||| |||||||    
T  34104738 gcagttttagtcatatctcc-tatttccagctccagaaacgcacaaaaatgacatttttagtccaaccacctatgctcaaccatgaaataaa 34104828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 43678730 - 43678647
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccat 114  Q
    ||||||| ||||  |||| ||||||| |||||  | ||||||||| |||||||||||| |||||||||||||||  ||||||||    
T  43678730 gcagtttcagtcatatcttcctatttccaactctagaaacgcacataaatgacagttttagttcaaccacctatactcaaccat 43678647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 44676572 - 44676663
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||| |||||||  |||||||||||| |||||  | |||||||||||||||||||||| ||| || ||  ||||| |||||||| |||||||    
T  44676572 gcagctttagtcctatctccctatttccaactcaagaaacgcacagaaatgacagttttagtccagccttctatgctcaaccatgaaataaa 44676663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 8873791 - 8873847
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagttt 88  Q
    ||||||||||||| | |||| |||||||||||||| ||||||| ||||||||||||||    
T  8873791 gcagttttagtcttacctcc-tattttcaacttcagaaacgcagagaaatgacagttt 8873847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 50900955 - 50900883
Alignment:
Q  50 cctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||| |||||||||| ||||||  |||||| || || ||| |||||| |||||||| |||||||    
T  50900955 cctattttcaactccataaacgcaaagaaattgcagttttagatctaccccctatgctcaaccatgaaataaa 50900883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 55192236 - 55192308
Alignment:
Q  50 cctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||| || ||||||| |||||||||||||| ||  | ||| |||||| |||||||| |||||||    
T  55192236 cctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaa 55192308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 20840695 - 20840751
Alignment:
Q  66 taaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||| |||||||||||||| ||  | ||| ||||||||||||||| |||||||    
T  20840695 taaacgcagagaaatgacagttttagacctaccccctatgttcaaccatgaaataaa 20840751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 49720774 - 49720726
Alignment:
Q  74 cagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||||||||  || |||||||||||| |||||||| |||||||    
T  49720774 cagaaatgacagttttggtccaaccacctatgctcaaccatgaaataaa 49720726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 6e-28; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 9796826 - 9796917
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| ||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||    
T  9796826 gcagttttagtcatatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgctcaaccataaaataaa 9796917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 35427258 - 35427167
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  35427258 gcagttttagtcccatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 35427167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 35694313 - 35694225
Alignment:
Q  34 gttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||| |||||||||||| ||||| || ||||||||| |||||||||||| ||| ||||||||||||||||||||| |||||||    
T  35694313 gttttagtcttatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgttcaaccatgaaataaa 35694225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 7911062 - 7910971
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  ||| | |||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  7911062 gcagttttagtcatatccctctattttcaactccataaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 7910971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 41260735 - 41260616
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        ||||||||||||  |||||||||||||||||| || ||||||||| |||||||||||| ||| |||||||    
T  41260735 aaaatcgtccctaaactatatgtttttt--gcagttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccac 41260638  T
Q  101 ctatgttcaaccataaaataaa 122  Q
     |||| |||||||| |||||||    
T  41260637 ttatgctcaaccatgaaataaa 41260616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 5731258 - 5731167
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||||   |||||||||||||||||| || ||||||||| |||||||||||| ||| |||||||||||| |||||||| |||||||    
T  5731258 gcagttttagttctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 5731167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 18049691 - 18049782
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || |||||||||||||||||||||| | | |||||||||||| |||||||| |||||||    
T  18049691 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttaatccaaccacctatgctcaaccatgaaataaa 18049782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 28254872 - 28254789
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccat 114  Q
    ||||||||||||  |||||||||||| ||||| || |||||||||||||||||||||| ||| |||||||||||| ||||||||    
T  28254872 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccat 28254789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 34799180 - 34799271
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| |||||||||||| |||||||| ||| ||| |||||||||||| |||||||| |||||||    
T  34799180 gcagttttagtcctatctccctatttccaactccataaacgcacataaatgacaattttagtccaaccacctatgctcaaccatgaaataaa 34799271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 34799529 - 34799438
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||| ||||||| ||||| |||||||||||| |||||| ||||| |||||||||||||||| |||||||| |||||||    
T  34799529 gcagttttagtcctatcttcctatttccaactccataaacgcacataaatgatagttttagttcaaccacctatgctcaaccatgaaataaa 34799438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 9797172 - 9797081
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||||   |||| ||||||| ||||| ||||||||||||||||||||||||| |||  ||||||||||| |||||||| |||||||    
T  9797172 gcagttttagttctatctacctatttccaactccataaacgcacagaaatgacagttttagtctaaccacctatgctcaaccatgaaataaa 9797081  T

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Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 28254526 - 28254617
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || ||||||| |||||||||| ||| ||| |||||||||||| |||||||| |||||||    
T  28254526 gcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacatttttagtccaaccacctatgctcaaccatgaaataaa 28254617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 35693971 - 35694061
Alignment:
Q  32 cagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||||  |||||||||||| ||||| || ||||||||| |||||||||||| ||| ||||||||| || |||||||| |||||||    
T  35693971 cagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctttgctcaaccatgaaataaa 35694061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 18050023 - 18049946
Alignment:
Q  45 atctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||||||||||| || |||||||||||||| ||||||| | | |||||||||||| |||||||| |||||||    
T  18050023 atctccctattttcaactccagaaacgcacagaaataacagttttactccaaccacctatgctcaaccatgaaataaa 18049946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 35426927 - 35427004
Alignment:
Q  45 atctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| |||  |||||| |||| |||||||| |||||||    
T  35426927 atctccctatttccaactccataaacgcacagaaatgacagttttagtctaaccacatatgctcaaccatgaaataaa 35427004  T

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Target: chr8; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 16578542 - 16578451
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||   | |||||||||||||||||||||| ||| |||||||||||| |||||| | |||||||    
T  16578542 gcagttttagtcctatctccctatttccaacactagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccgtgaaataaa 16578451  T

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Target: chr8; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 18428207 - 18428116
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||| ||  |||||||||||| ||||| || ||||||||| |||||||||||| ||| |||||| ||||| |||||||| |||||||    
T  18428207 gcagttttactcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccatctatgctcaaccatgaaataaa 18428116  T

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Target: chr8; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 122
Target Start/End: Original strand, 42035876 - 42035963
Alignment:
Q  35 ttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||  ||||||||||||  |||| |||||||||||| |||||||||||| ||| ||||||| |||| |||||||| |||||||    
T  42035876 ttttagtcctatctccctatttctaactccataaacgcacaaaaatgacagttttagtccaaccacatatgctcaaccatgaaataaa 42035963  T

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Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 122
Target Start/End: Original strand, 35163815 - 35163889
Alignment:
Q  48 tccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||| |||||  | |||||||||||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  35163815 tccctatttccaactcgagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 35163889  T

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Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 5730920 - 5731007
Alignment:
Q  34 gttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||  | ||||||||||| |||| || ||||| |||||||||||||||| || |||| ||||||||||||||||| |||||||    
T  5730920 gttttagtcctacctccctatttttaactccagaaacgtacagaaatgacagttttag-tcaatcacctatgttcaaccatgaaataaa 5731007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 26252881 - 26253000
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        ||||||||||||  |||||||||||| ||||| || |||||| |||||||||||| || ||| |||||||    
T  26252881 aaaatcgtccctaaactatatgttttgt--gcagttttagtcctatctccctatttccaactccagaaacgctcagaaatgacagatttagtccaaccac 26252978  T
Q  101 ctatgttcaaccataaaataaa 122  Q
    ||||  ||||| || |||||||    
T  26252979 ctatactcaacaatgaaataaa 26253000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 599632 - 599723
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || ||||||||| |||||||||||| ||| || ||||||| |  ||||||| |||||||    
T  599632 gcagttttagtcatatctccctatttccaactccagaaacgcacacaaatgacagttttagtccagccacctacgcgcaaccatgaaataaa 599723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 599944 - 599853
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||| ||||| |||||| ||| | || ||||||| |||||||||||||| ||| ||||||| |||| | |||||| |||||||    
T  599944 gcagttttagtcttatctctctatttccaattccagaaacgcatagaaatgacagttttagtccaaccacttatgctaaaccatgaaataaa 599853  T

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Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 122
Target Start/End: Original strand, 2208819 - 2208906
Alignment:
Q  35 ttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||  |||||||||||||||| | || ||||| |||||||| | ||||| ||| |||||||||||| |||||||| |||||||    
T  2208819 ttttagtcatatctccctattttcaattccagaaacgtacagaaataatagttttagtccaaccacctatgctcaaccatgaaataaa 2208906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 6115542 - 6115465
Alignment:
Q  45 atctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||| |||||||||||  | |||||||||||||||||||||| ||| ||||||| ||||  ||||||| |||||||    
T  6115542 atctccttattttcaactcaagaaacgcacagaaatgacagttttagtccaaccacttatgcccaaccatgaaataaa 6115465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 15256274 - 15256203
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacct 102  Q
    |||||| |||||  |||||||||||| ||||| || |||||||||||||||||| ||| ||| |||||||||    
T  15256274 gcagttctagtcatatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacct 15256203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 7910757 - 7910808
Alignment:
Q  71 gcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||||||||||| |||  |||||| ||||||||||||| |||||||    
T  7910757 gcacagaaatgacagttttagtcaaaccacatatgttcaaccatgaaataaa 7910808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 122
Target Start/End: Complemental strand, 42036196 - 42036126
Alignment:
Q  52 tattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||| ||||| || ||| ||||| |||||||||||| ||| |||||||||||  |||||||| |||||||    
T  42036196 tatttccaactccagaaatgcacaaaaatgacagttttagtccaaccacctatactcaaccatgaaataaa 42036126  T

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Target: chr2 (Bit Score: 61; Significance: 4e-26; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 4355827 - 4355946
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        ||||||||||||  |||||||||||||||||| || ||||||||| |||||||||||| ||| |||||||    
T  4355827 aaaatcgtccctaaactatatgtttttt--gcagttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccac 4355924  T
Q  101 ctatgttcaaccataaaataaa 122  Q
    |||||||||||||| |||||||    
T  4355925 ctatgttcaaccatgaaataaa 4355946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 6949552 - 6949643
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| ||||||||||||||||||||||||| ||| ||||||||||| ||||||||| |||||||    
T  6949552 gcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatattcaaccatgaaataaa 6949643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 5560996 - 5560905
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || |||||||||||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  5560996 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 5560905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 43160110 - 43160201
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||||||||| || ||||||||| |||||||||||| |||  |||||||||||||||||||| |||||||    
T  43160110 gcagttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtctaaccacctatgttcaaccatgaaataaa 43160201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 43215809 - 43215900
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||||||||| || ||||| | |||||||||||||| ||| ||||||||||||||||||||| |||||||    
T  43215809 gcagttttagtcatatctccctattttcaactccaaaaacgaatagaaatgacagttttagtccaaccacctatgttcaaccatgaaataaa 43215900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 33920684 - 33920803
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        ||||||||||||  |||||||||||||||||| || ||||||| |||||||||||||| ||| || ||||    
T  33920684 aaaatcgtccctaaactatatgattttt--gcagttttagtcctatctccctattttcaactccagaaacgcatagaaatgacagttttagtccagccac 33920781  T
Q  101 ctatgttcaaccataaaataaa 122  Q
    ||||| |||||||| |||||||    
T  33920782 ctatgctcaaccatgaaataaa 33920803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 11539738 - 11539829
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || ||||||||| |||||||||||| ||| |||||||||||| |||||||| |||||||    
T  11539738 gcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 11539829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 13399866 - 13399775
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| |||||||||| |||||||||||||| | | |||||||||||| |||||||| |||||||    
T  13399866 gcagttttagtcatatctccctatttccaactccataaacgcatagaaatgacagttttaatccaaccacctatgctcaaccatgaaataaa 13399775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 16175795 - 16175704
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || ||||||||| |||||||||||| ||| |||||||||||| |||||||| |||||||    
T  16175795 gcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 16175704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 16953380 - 16953289
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || |||||||||||||||||||||| ||| |||||| ||||| |||||||| |||||||    
T  16953380 gcagttttagtcctatctccctatttccaactccaaaaacgcacagaaatgacagttttagtccaaccaactatgctcaaccatgaaataaa 16953289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 38008397 - 38008306
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| |||||||||||| |||||| ||||| ||| |||||||||||| |||||||| |||||||    
T  38008397 gcagttttagtcctatctccctatttccaactccataaacgcacataaatgatagttttagtccaaccacctatgctcaaccatgaaataaa 38008306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 42192688 - 42192597
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  ||| |||||||| ||||| || |||||||||||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  42192688 gcagttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 42192597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 15550745 - 15550871
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        ||||||||||||  || ||||||||||||||| || |||||||||||||||||||||| ||||||||||     
T  15550745 aaaatcgtccctaaactatatgttttttt-gcagttttagtcctatttccctattttcaactccagaaacgcacagaaatgacagttttagttcaaccat 15550843  T
Q  101 ctatgttcaaccataaaataaatgatga 128  Q
     |||| ||||| || |||||||| ||||    
T  15550844 atatgctcaactatgaaataaataatga 15550871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 122
Target Start/End: Original strand, 4808981 - 4809070
Alignment:
Q  33 agttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||  |||| ||||||| ||||| || |||||||||||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  4808981 agttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 4809070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 38008022 - 38008142
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        ||||||||||||  |||||||||||| ||||| || |||||||||||||||||||||| | | ||||| |    
T  38008022 aaaatcgtccctaaactatatgttttttt-gcagttttagtcatatctccctatttccaactccaaaaacgcacagaaatgacagttttaatccaaccgc 38008120  T
Q  101 ctatgttcaaccataaaataaa 122  Q
    ||||| |||||||| |||||||    
T  38008121 ctatgctcaaccatgaaataaa 38008142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 63057 - 63148
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| |||||  | ||||||||| |||||||||||| ||| |||||||||||| |||||||| |||||||    
T  63057 gcagttttagtcctatctccctatttccaactcaagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 63148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 4809325 - 4809234
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || ||| ||||| |||||||||||| ||| |||||||||||| |||||||| |||||||    
T  4809325 gcagttttagtcctatctccctatttccaactacaaaaaagcacaaaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 4809234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 11540084 - 11539993
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  || ||||||||| ||||| || |||||||||||||||||||||| ||| |||||||||||| ||||| || |||||||    
T  11540084 gcagttttagtcatatatccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaacaatgaaataaa 11539993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 20128179 - 20128092
Alignment:
Q  35 ttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||  |||||||||||| ||||| || ||||||||| |||||||||||| ||| |||||||||||| |||||||| |||||||    
T  20128179 ttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 20128092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 32418257 - 32418348
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||| ||||| ||||| || |||||||||||||||||| ||| ||| |||||||||||| |||||||| |||||||    
T  32418257 gcagttttagtcatatctccttatttccaactccagaaacgcacagaaatgacatttttagtccaaccacctatgctcaaccatgaaataaa 32418348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 43160456 - 43160365
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || |||||||||||||||||||||| | | |||||| ||||| |||||||| |||||||    
T  43160456 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttaatccaaccatctatgatcaaccatgaaataaa 43160365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 22445741 - 22445831
Alignment:
Q  32 cagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||   ||||||||||||||||||||| |||| |||| |||||||||||| |||  ||||||||||| |||||||| |||||||    
T  22445741 cagttttagtactatctccctattttcaacttcagaaacacacataaatgacagttttagtcaaaccacctatgctcaaccatgaaataaa 22445831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 16953007 - 16953128
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    |||||||||| |||||||||||        || |||||||||  |||||||||||| |||||  | |||||||||||||||||||||| ||| |||| ||    
T  16953007 aaaatcgtccttaaactatatgttttttttgcggttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaactac 16953106  T
Q  101 ctatgttcaaccataaaataaa 122  Q
    ||||| |||||||| |||||||    
T  16953107 ctatgctcaaccatgaaataaa 16953128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 17060978 - 17061099
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    |||||||||| |||||||||||        || |||||||||  |||||||||||| |||||  | |||||||||||||||||||||| ||| |||| ||    
T  17060978 aaaatcgtccttaaactatatgttttttttgcggttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaactac 17061077  T
Q  101 ctatgttcaaccataaaataaa 122  Q
    ||||| |||||||| |||||||    
T  17061078 ctatgctcaaccatgaaataaa 17061099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 33921057 - 33920976
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaacc 112  Q
    ||||||||||||  |||||||||||| |||||  | |||||||||||||||||||||| ||| |||||||||||| ||||||    
T  33921057 gcagttttagtcctatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaaccacctatgctcaacc 33920976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 13315596 - 13315688
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaac-gcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || |||  |||||||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  13315596 gcagttttagtcctatctccctatttccaactccagaaaatgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 13315688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 63404 - 63313
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||| ||||||| |||||  | ||||||||| |||||||||||| ||| |||||||||||| |||||||| |||||||    
T  63404 gcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 63313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 9330240 - 9330149
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||| |||||||||||||  | |||| || |||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  9330240 gcagttttagtcctatctacctattttcaactatagaaacacatagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 9330149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 43216155 - 43216064
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  ||||| |||||| ||||| || ||| |||||||||||||| ||| ||| |||||||||||| |||||||| |||||||    
T  43216155 gcagttttagtcctatctctctatttccaactccagaaatgcacagaaatgacaattttagtccaaccacctatgctcaaccatgaaataaa 43216064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 44219744 - 44219827
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccat 114  Q
    ||||||||||||  |||||||| ||| ||||| || |||||||||||||||||||||| ||| ||| |||||||| ||||||||    
T  44219744 gcagttttagtcctatctccctgtttccaactccagaaacgcacagaaatgacagttttagtccaatcacctatgctcaaccat 44219827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 122
Target Start/End: Complemental strand, 4356185 - 4356111
Alignment:
Q  48 tccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||| ||||| || |||||||||||||||||||||| ||| |||||||||||| |||| ||| |||||||    
T  4356185 tccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaagcatgaaataaa 4356111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 42192312 - 42192431
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        ||||||||||||  ||||||||||||  |||| || ||||||||| |||||||||||| ||| |||||||    
T  42192312 aaaatcgtccctaaactatatgtttttt--gcagttttagtcctatctccctatttctaactccagaaacgcacataaatgacagttttagtccaaccac 42192409  T
Q  101 ctatgttcaaccataaaataaa 122  Q
     |||| |||| ||| |||||||    
T  42192410 atatgctcaatcatgaaataaa 42192431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 122
Target Start/End: Original strand, 9329985 - 9330071
Alignment:
Q  35 ttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||  |||||| ||||| |||||  | ||||||||||||||||||||||||| |||||||| |||| |||||||| |||||||    
T  9329985 ttttagtcctatctccttatttccaactctagaaacgcacagaaatgacagtttcag-tcaaccacttatgctcaaccatgaaataaa 9330071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 15551120 - 15551029
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || ||||||||| |||| | ||||| ||| ||||||| |||| |||||||| |||||||    
T  15551120 gcagttttagtcctatctccctatttccaactccagaaacgcacataaataatagttttagtccaaccacatatgctcaaccatgaaataaa 15551029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 20127837 - 20127928
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||  || ||||||||| |||||||| ||| ||| |||||||||||  |||||||| |||||||    
T  20127837 gcagttttagtcctatctccctatttccaaccccagaaacgcacaaaaatgacaattttagtccaaccacctatactcaaccatgaaataaa 20127928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 13399494 - 13399579
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagttt 88  Q
    ||||||||||||||||||||||        ||||||||||||  |||||||||||| ||||| || ||||||||||||||||||||||    
T  13399494 aaaatcgtccctaaactatatgtttttt--gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttt 13399579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 44220071 - 44219998
Alignment:
Q  49 ccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||| ||||| || ||||| ||| |||||| | ||| ||| |||||||||||| ||||||||||||||||    
T  44220071 ccctatttccaactccagaaacgtacaaaaatgataattttagtccaaccacctatgctcaaccataaaataaa 44219998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 122
Target Start/End: Original strand, 649642 - 649717
Alignment:
Q  46 tctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||| ||||| || ||||||||| ||||||| |||| ||| || ||||||||| |||||||| |||||||    
T  649642 tctccctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaa 649717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 6949855 - 6949807
Alignment:
Q  74 cagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  6949855 cagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 6949807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 28143457 - 28143385
Alignment:
Q  50 cctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||| || ||||||| |||||||||||||| ||  | ||| |||||| |||||||| |||||||    
T  28143457 cctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaa 28143385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 35643667 - 35643758
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| ||||||||||||||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  35643667 gcagttttagtcctatctccctatttacaactccataaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 35643758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 54440669 - 54440760
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  ||||||||||||||||||||| ||| |||||||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  54440669 gcagttttagtcctatctccctattttcaacttcagaaatgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 54440760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 26974385 - 26974475
Alignment:
Q  32 cagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||||  |||||||||||| ||||| || |||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  26974385 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagttcaaccaactatgctcaaccataaaataaa 26974475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 46736769 - 46736846
Alignment:
Q  45 atctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||||||||||| || |||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||    
T  46736769 atctccctattttcaactccagaaacgcacagaaatgacagttttagttcaaccacttatgttcaaccatgaaataaa 46736846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 14439900 - 14440019
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        ||||||||||||  |||||||||||| ||||| || |||||||||||||||||||||| ||| |||||||    
T  14439900 aaaatcgtccctaaactatatgtttttt--gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccac 14439997  T
Q  101 ctatgttcaaccataaaataaa 122  Q
    ||||| |||||||| |||||||    
T  14439998 ctatgctcaaccatgaaataaa 14440019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 24851565 - 24851656
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||| |||||||||||| ||||| || ||||||||| |||||||||||| ||| |||||||||||||||| |||| |||||||    
T  24851565 gcagttttagtcttatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgttcagccatgaaataaa 24851656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 28166104 - 28166195
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||||||||| || |||||||||||||||| ||||| | |||||||||||||| |||||||| |||||||    
T  28166104 gcagttttagtcctatctccctattttcaactacaaaaacgcacagaaatgatagttttaattcaaccacctatgctcaaccatgaaataaa 28166195  T

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Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 28465181 - 28465272
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||||||||| || ||||||||| |||||||||||| ||| |||||||||||| |||||||| |||||||    
T  28465181 gcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 28465272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 41608475 - 41608566
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||| ||||| |||||||| |||||||||||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  41608475 gcagttttagtcctatctccatatttccaacttcaaaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 41608566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 21034337 - 21034427
Alignment:
Q  32 cagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||||  |||||||||||| ||||| |||||||||||| |||||||||||| ||| |||||||||| |||||||||| |||||||    
T  21034337 cagttttagtcatatctccctatttccaactccataaacgcacataaatgacagttttagtccaaccacctacgttcaaccatcaaataaa 21034427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 123
Target Start/End: Complemental strand, 12593469 - 12593377
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaat 123  Q
    ||||||||||||  |||||||||||||||||| || |||||||||| ||||||||||| ||| ||||||| |||| |||||||| ||||||||    
T  12593469 gcagttttagtcctatctccctattttcaactccagaaacgcacaggaatgacagttttagtccaaccacatatgctcaaccatgaaataaat 12593377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 36168774 - 36168686
Alignment:
Q  34 gttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||  |||||||||||||||||| |||||| ||||| |||| ||||||| ||| |||||||||||| ||||||||||||||||    
T  36168774 gttttagtcctatctccctattttcaactccataaatgcacataaatcacagttttagtccaaccacctatgctcaaccataaaataaa 36168686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 14440274 - 14440183
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| |||||  | |||||||||||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  14440274 gcagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 14440183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 34789828 - 34789737
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || ||||||||| |||||||||||| ||| |||||||||||| |||||||| |||||||    
T  34789828 gcagttttagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 34789737  T

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Target: chr4; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 34807585 - 34807494
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| |||||||||| |||||||||||||| ||| ||||||| |||| |||||||| |||||||    
T  34807585 gcagttttagtcctatctccctatttccaactccataaacgcatagaaatgacagttttagtccaaccacatatgctcaaccatgaaataaa 34807494  T

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Target: chr4; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 45838619 - 45838738
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        ||||||||||||  |||||||||||| | |||||| |||||||||||||||| |||||  || |||||||    
T  45838619 aaaatcgtccctaaactatatgtttttt--gcagttttagtcctatctccctatttcctacttcaaaaacgcacagaaatgatagtttttgtccaaccac 45838716  T
Q  101 ctatgttcaaccataaaataaa 122  Q
    ||||| |||||||| |||||||    
T  45838717 ctatgctcaaccatgaaataaa 45838738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 55677399 - 55677312
Alignment:
Q  35 ttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||  |||||||||||| ||||| |||||||||||| |||||||||||| ||| ||| |||||||| |||||||| |||||||    
T  55677399 ttttagtcctatctccctatttccaactccataaacgcacataaatgacagttttagtccaatcacctatgctcaaccatgaaataaa 55677312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 45 - 111
Target Start/End: Original strand, 12593138 - 12593204
Alignment:
Q  45 atctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaac 111  Q
    |||||||||||||||||| || |||||||||||||||||||||| ||| |||| |||||||||||||    
T  12593138 atctccctattttcaactccagaaacgcacagaaatgacagttttagtccaacaacctatgttcaac 12593204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 31 - 120
Target Start/End: Original strand, 34807217 - 34807306
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaata 120  Q
    ||||||||||||  |||||| ||||| ||||| || ||||||||| |||||||||||| ||| |||||||||||| |||||||| |||||    
T  34807217 gcagttttagtcctatctccatatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaata 34807306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 123
Target Start/End: Complemental strand, 19529139 - 19529047
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaat 123  Q
    |||||||||||   |||||| ||||| |||||| | |||||||||||||||||||||| ||| |||||| ||||| |||||||| ||||||||    
T  19529139 gcagttttagttctatctccatatttccaacttaaaaaacgcacagaaatgacagttttagtccaaccatctatgctcaaccatgaaataaat 19529047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 24851940 - 24851820
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        ||||||||||||  ||||  |||||| ||||| || |||||||||||||||| ||||| ||| |||||||    
T  24851940 aaaatcgtccctaaactatatgttttttt-gcagttttagtcctatctttctatttccaactccagaaacgcacagaaatgaaagttttagtacaaccac 24851842  T
Q  101 ctatgttcaaccataaaataaa 122  Q
    ||||| |||||||| |||||||    
T  24851841 ctatgctcaaccatgaaataaa 24851820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 46737129 - 46737010
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        ||||||||||||  |||| ||||| | ||||| || |||||||||||||||||||||| ||| |||||||    
T  46737129 aaaatcgtccctaaactatatgtttttt--gcagttttagtcatatcttcctatctccaactccagaaacgcacagaaatgacagttttagtccaaccac 46737032  T
Q  101 ctatgttcaaccataaaataaa 122  Q
    ||||| | |||||| |||||||    
T  46737031 ctatgctaaaccatgaaataaa 46737010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 52 - 123
Target Start/End: Original strand, 229282 - 229353
Alignment:
Q  52 tattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaat 123  Q
    ||||||||||| |||||||||||| || ||||||||| ||| |||||||||||| |||||||| ||||||||    
T  229282 tattttcaactccataaacgcacaaaagtgacagttttagtccaaccacctatgctcaaccatgaaataaat 229353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 28465523 - 28465436
Alignment:
Q  35 ttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||  |||||||||||| ||||| |||||||||||| ||||  |||||| ||| |||||||||||| |||||||| |||||||    
T  28465523 ttttagtcctatctccctatttccaactccataaacgcacataaatagcagttttagtccaaccacctatgctcaaccatgaaataaa 28465436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 33689928 - 33690019
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || ||||||||| |||||||||| | ||| |||||||||||  |||||||| |||||||    
T  33689928 gcagttttagtcatatctccctatttacaactccagaaacgcacataaatgacagtgttagtccaaccacctatactcaaccatgaaataaa 33690019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 34789482 - 34789573
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  ||||||||||||  |||| || ||||||||| |||||||| ||| ||| |||||||||||| |||||||| |||||||    
T  34789482 gcagttttagtcctatctccctatttcaaactccagaaacgcacataaatgacaattttagtccaaccacctatgctcaaccatgaaataaa 34789573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 36168432 - 36168523
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||| ||||||||||||  |||| || ||||||| | |||||||||||  ||| ||||||||||||||||| ||| |||||||    
T  36168432 gcagttttagtcttatctccctatttctaactccagaaacgcatataaatgacagttatagtccaaccacctatgttcaatcatgaaataaa 36168523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 41114259 - 41114342
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccat 114  Q
    ||||||||||||  |||||||||||| |||||  | |||||||||||||||||| ||| ||| |||||||||||| ||||||||    
T  41114259 gcagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacaattttagtccaaccacctatgctcaaccat 41114342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 45838993 - 45838902
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||| ||||||| ||||| || |||||||||||||||||||||| ||| ||||||| |||| ||| |||| |||||||    
T  45838993 gcagttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacatatgctcagccatgaaataaa 45838902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 56077770 - 56077679
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| |||||  | ||||||||| |||||||||||| ||| ||||||||||||  ||||||| |||||||    
T  56077770 gcagttttagtcctatctccctatttccaactctagaaacgcacaaaaatgacagttttagtccaaccacctatgcccaaccatgaaataaa 56077679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 18965564 - 18965490
Alignment:
Q  49 ccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaat 123  Q
    |||||||||||||| |||||||||||| |||||||||||| ||| ||||||| | || |||||||| ||||||||    
T  18965564 ccctattttcaactccataaacgcacataaatgacagttttagtccaaccacatctgctcaaccatgaaataaat 18965490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 123
Target Start/End: Complemental strand, 229589 - 229513
Alignment:
Q  47 ctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaat 123  Q
    |||| ||||||||||| || |||||||||||| ||||| ||| ||| |||||||||||| |||||||| ||||||||    
T  229589 ctccttattttcaactccagaaacgcacagaagtgacaattttagtacaaccacctatgctcaaccatgaaataaat 229513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 21034682 - 21034594
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaat 119  Q
    |||||||||||   |||||||||||| ||||| || |||| |||| |||||||||||| ||| |||||||||||| |||||||| ||||    
T  21034682 gcagttttagttctatctccctatttccaactccagaaacacacaaaaatgacagttttagtccaaccacctatgctcaaccatgaaat 21034594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 35193380 - 35193498
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        ||||||||||||  |||||| |||||||||||||| ||||||| |||||||||||||| ||  | ||| |    
T  35193380 aaaatcgtccctaaactatatgtttttt--gcagttttagtcctatctcc-tattttcaacttcagaaacgcagagaaatgacagttttagacctacccc 35193476  T
Q  101 ctatgttcaaccataaaataaa 122  Q
    ||||| |||||||| |||||||    
T  35193477 ctatgctcaaccatgaaataaa 35193498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 54441015 - 54440924
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || ||||||||   ||||||||||| ||| |||||||||||| ||||| || |||||||    
T  54441015 gcagttttagtcctatctccctatttccaactccagaaacgcacgtcaatgacagttttagtccaaccacctatgctcaactatgaaataaa 54440924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 16214927 - 16214850
Alignment:
Q  45 atctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||| ||||||||||||| || |||| |||| |||||| ||||| ||| |||||||||||| |||||||| |||||||    
T  16214927 atcttcctattttcaactccagaaacacacataaatgatagttttagtccaaccacctatgctcaaccatgaaataaa 16214850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 6616793 - 6616864
Alignment:
Q  51 ctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||| ||||| || ||||||||| |||||||||||| ||| |||||||||||| || ||||| |||||||    
T  6616793 ctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgctctaccatgaaataaa 6616864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 19528941 - 19529027
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagttt 88  Q
    ||||||||||||||||||||||        ||||||||||||  |||||||||||| ||||| |  ||||||||||||||||||||||    
T  19528941 aaaatcgtccctaaactatatgttttttt-gcagttttagtcctatctccctatttccaactccggaaacgcacagaaatgacagttt 19529027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 6617075 - 6617027
Alignment:
Q  74 cagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||||| ||| ||||| ||||||||||||||| |||||||    
T  6617075 cagaaatgacagttttagtccaaccgcctatgttcaaccatgaaataaa 6617027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 33777768 - 33777813
Alignment:
Q  77 aaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||| ||||| ||| ||||||||||||||||||||| |||||||    
T  33777768 aaatgagagttttagtccaaccacctatgttcaaccatgaaataaa 33777813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 10246979 - 10247031
Alignment:
Q  218 ataaattgtcgttttcttattattgagtcaaaaagagtgttattattattatt 270  Q
    |||||||||| ||||||||||||||||||||  || || |||||| |||||||    
T  10246979 ataaattgtcattttcttattattgagtcaactagtgtattattactattatt 10247031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 17504092 - 17504164
Alignment:
Q  50 cctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||| || ||||| | |||||||||||||| ||  | ||| |||||| |||||||| |||||||    
T  17504092 cctattttcaactccagaaacgtagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaa 17504164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 21938663 - 21938754
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| ||||||||||||||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  21938663 gcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 21938754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 34555856 - 34555735
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    |||||||||| |||||||||||        ||||||||||||  |||||||||||| ||||| || |||||||||||||||||||||| ||| |||||||    
T  34555856 aaaatcgtccttaaactatatgttttttttgcagttttagtcatatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccac 34555757  T
Q  101 ctatgttcaaccataaaataaa 122  Q
    ||||| |||||||| |||||||    
T  34555756 ctatgctcaaccatgaaataaa 34555735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 1837605 - 1837696
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||||||||| || ||||||||| |||||||||||| ||| |||||||||||| |||||||| |||||||    
T  1837605 gcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 1837696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 37505514 - 37505423
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||||||||| || ||||||||| |||||||||||| ||| |||||||||||| |||||||| |||||||    
T  37505514 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 37505423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 17641810 - 17641720
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataa 121  Q
    ||||||||||||  |||||||||||| ||||| || |||||||||||||||||||||| |||||||||||||||| |||| ||| ||||||    
T  17641810 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagttcaaccacctatgctcaatcatgaaataa 17641720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 17641479 - 17641556
Alignment:
Q  45 atctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||||| ||||| || ||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||    
T  17641479 atctccctatttccaactccagaaacgcacataaatgacagttttagttcaaccacctatgttcaaccatgaaataaa 17641556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 37421232 - 37421353
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        ||||||||||||  || ||||||||| ||||| || |||||||||||||||||||||| |||  ||||||    
T  37421232 aaaatcgtccctaaactatatgttttttttgcagttttagtcatatttccctatttccaactccaaaaacgcacagaaatgacagttttagtctaaccac 37421331  T
Q  101 ctatgttcaaccataaaataaa 122  Q
    ||||| |||||||| |||||||    
T  37421332 ctatgctcaaccatgaaataaa 37421353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 8230115 - 8229996
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        ||||||||||||  ||| |||||||| ||||| || |||||||||||||||||||||| ||| |||||||    
T  8230115 aaaatcgtccctaaactatatgtttttt--gcagttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccac 8230018  T
Q  101 ctatgttcaaccataaaataaa 122  Q
    |||||||||| ||| |||||||    
T  8230017 ctatgttcaatcatgaaataaa 8229996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 30786844 - 30786963
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        ||||||||||||  |||||||||||| ||||| |||||||||||||||||||| |||| ||| |||||||    
T  30786844 aaaatcgtccctaaactatatgtttttt--gcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacggttttagtccaaccac 30786941  T
Q  101 ctatgttcaaccataaaataaa 122  Q
     |||| |||||||| |||||||    
T  30786942 ttatgctcaaccatgaaataaa 30786963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 1744427 - 1744518
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || ||||||||| |||||||||||| ||| |||||||||||  ||||||||||||||||    
T  1744427 gcagttttagtcatatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatactcaaccataaaataaa 1744518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 34555451 - 34555572
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||         |||||||||||  |||||||||||| ||||| || |||||||||||||||| ||||| |||||||||||    
T  34555451 aaaatcgtccctaaactatatgttttttttacagttttagtcctatctccctatttccaactccagaaacgcacagaaatgatagttttagttcaaccac 34555550  T
Q  101 ctatgttcaaccataaaataaa 122  Q
     |||| | |||||| |||||||    
T  34555551 atatgcttaaccatgaaataaa 34555572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 44582504 - 44582412
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaa-cgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||||||  |||||||||||||| || || ||| ||||||||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  44582504 gcagttttagtcttgtctccctattttcagctccaaaaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 44582412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 9992255 - 9992346
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || |||| ||||||||||||||||| ||| | |||||||||| |||||||| |||||||    
T  9992255 gcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttagtccgaccacctatgctcaaccatgaaataaa 9992346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 16299128 - 16299037
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||| ||||| ||||| || |||||||||||||||||| ||| |||||||||||||||  |||||||| |||||||    
T  16299128 gcagttttagtcctatctccatatttccaactccagaaacgcacagaaatgacaattttagttcaaccacctatactcaaccatgaaataaa 16299037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 23340283 - 23340374
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||| ||||| ||||| || |||||| ||||||||||||||| ||||||||||| |||| |||||||| |||||||    
T  23340283 gcagttttagtcatatctccttatttccaactccagaaacgctcagaaatgacagttttagttcaaccacatatgctcaaccatgaaataaa 23340374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 44954672 - 44954589
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccat 114  Q
    ||||||||||||  |||||||||||| ||||| || |||||||||||||||||||||| |||  ||||||||||| ||||||||    
T  44954672 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtcaaaccacctatgctcaaccat 44954589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 52335956 - 52335865
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||||| || ||||||||| |||||||||||| ||| ||||||| |||| |||||||| |||||||    
T  52335956 gcagttttagtcatatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacatatgctcaaccatgaaataaa 52335865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 4080122 - 4080212
Alignment:
Q  32 cagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||||  |||||||||||| |||||  | ||||||||| |||||||||||| ||| |||||| |||||||||||||| |||||||    
T  4080122 cagttttagtcatatctccctatttccaactctagaaacgcacaaaaatgacagttttagtccaaccatctatgttcaaccatgaaataaa 4080212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 8229740 - 8229831
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  ||||||||||||  |||| || |||||||||||||||||||||| ||| |||| || |||| |||||||| |||||||    
T  8229740 gcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttagtccaactacatatgctcaaccatgaaataaa 8229831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 29021309 - 29021219
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||| | | |||||||||||||| || ||||||||| ||||||||||||  || |||||||||||| |||||||| |||||||    
T  29021309 gcagttttagtcttacc-ccctattttcaactccagaaacgcacataaatgacagtttttgtccaaccacctatgctcaaccatgaaataaa 29021219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 30787214 - 30787127
Alignment:
Q  35 ttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||  || ||||||||||||||| |||||| ||| |||||||||||||| ||| |||| ||||||| |||||||| |||||||    
T  30787214 ttttagtcctatttccctattttcaactccataaatgcagagaaatgacagttttagtccaactacctatgctcaaccatgaaataaa 30787127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 50305228 - 50305137
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||||||||| ||||||| |||| |||||||||||| | | |||| || |||| |||||||| |||||||    
T  50305228 gcagttttagtcatatctccctattttcaactccataaacacacataaatgacagttttaatccaactacttatgctcaaccatgaaataaa 50305137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 6224800 - 6224882
Alignment:
Q  32 cagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccat 114  Q
    |||||||||||| ||||| |||||| ||||| || ||||||||| |||||||||||| |||  ||||||||||| ||||||||    
T  6224800 cagttttagtcttatctctctatttccaactccagaaacgcacataaatgacagttttagtcaaaccacctatgctcaaccat 6224882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 10278995 - 10278905
Alignment:
Q  32 cagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||||  |||||| ||| | ||||| || |||| ||||||||||||||||| ||| ||||||| ||||||||||||| |||||||    
T  10278995 cagttttagtcctatctccatatatccaactccagaaacacacagaaatgacagttttagtccaaccacatatgttcaaccatgaaataaa 10278905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 23526758 - 23526847
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataa 121  Q
    |||||||||||| |  | |||||||||||||| || |||||||||||||||||||||| ||| |||||| ||||| |||||||| ||||||    
T  23526758 gcagttttagtccctgccccctattttcaactccaaaaacgcacagaaatgacagttt-agtacaaccatctatgctcaaccatgaaataa 23526847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 443997 - 443918
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaa 110  Q
    ||||||||||||  |||||||||||| ||| | ||||||||| || |||||||||||| ||| |||||||||||| ||||    
T  443997 gcagttttagtcctatctccctatttccaattccataaacgcgcataaatgacagttttagtccaaccacctatgctcaa 443918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 9992601 - 9992510
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||| ||||||  |||||||||||||||||| || ||||||  |||||||||||||| | | |||||| ||||| |||||||| |||||||    
T  9992601 gcagtattagtcctatctccctattttcaactccagaaacgcgtagaaatgacagttttaatccaaccatctatgctcaaccatgaaataaa 9992510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 10278620 - 10278739
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        ||||||||||||  ||||||| |||| ||||| || ||||||||| |||||||| ||| ||| |||||||    
T  10278620 aaaatcgtccctaaactatatgttttttt-gcagttttagtcctatctccccatttgcaactccagaaacgcacataaatgacaattttagtccaaccac 10278718  T
Q  101 ctatgttcaaccataaaataa 121  Q
    ||||| ||||| || ||||||    
T  10278719 ctatgctcaactatgaaataa 10278739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 44954326 - 44954409
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccat 114  Q
    ||||||||||||  ||||| || ||| ||||| || |||||||||||||||||||||| ||| ||||||| |||| ||||||||    
T  44954326 gcagttttagtcgtatctctctgtttccaactccagaaacgcacagaaatgacagttttagtccaaccacatatgctcaaccat 44954409  T

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Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 29439334 - 29439285
Alignment:
Q  74 cagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaat 123  Q
    ||||||||||||||| ||| ||||||||||||||||||||| ||||||||    
T  29439334 cagaaatgacagttttagtccaaccacctatgttcaaccatgaaataaat 29439285  T

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Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 50926669 - 50926596
Alignment:
Q  49 ccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||||||| ||||||| |||| |||||  ||||| ||| |||||||||||| || |||||||||||||    
T  50926669 ccctattttcaactccataaacacacataaatggtagttttagtccaaccacctatgctctaccataaaataaa 50926596  T

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Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 31 - 119
Target Start/End: Original strand, 44582157 - 44582245
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaat 119  Q
    ||||||||||||  |||||  | ||| ||||| |||||||||||| |||||||| ||| ||| |||||||||||| |||||||| ||||    
T  44582157 gcagttttagtcctatctctttgtttccaactccataaacgcacataaatgacaattttagtccaaccacctatgctcaaccatgaaat 44582245  T

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Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 29439031 - 29439122
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  ||||| |||||||||| |  | |||| |||| |||| ||||||| ||| |||||||||||| |||||||| |||||||    
T  29439031 gcagttttagtcctatctctctattttcaattcaaaaaacacacaaaaataacagttttagtccaaccacctatgctcaaccatgaaataaa 29439122  T

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Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 37505168 - 37505259
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  || ||||||||||||||| || ||| | |||||||||||||||| ||| || | | ||||| |||||||| |||||||    
T  37505168 gcagttttagtcctatttccctattttcaactccaaaaatgaacagaaatgacagttttagtccagctatctatgctcaaccatgaaataaa 37505259  T

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Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 50304882 - 50304973
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  ||||||||||||  |||| ||||||| |||| ||||| || ||| | | |||||||||||| |||||||| |||||||    
T  50304882 gcagttttagtcatatctccctatttcaaactccataaacacacaaaaatggcaattttaatccaaccacctatgctcaaccatgaaataaa 50304973  T

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Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 9833580 - 9833507
Alignment:
Q  49 ccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||||||| || |||||||||||||| ||| ||| ||| | |||||||||| ||||| || |||||||    
T  9833580 ccctattttcaactccagaaacgcacagaaataacatttttagtcctaccacctatgctcaactatgaaataaa 9833507  T

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Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 16298754 - 16298873
Alignment:
Q  1 aaaatcgtccctaaactatatgnnnnnnnngcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccac 100  Q
    ||||||||||||||||||||||        ||||||||||||  |||| ||||||| |||||    ||||||| | |||||| ||||| ||| |||||||    
T  16298754 aaaatcgtccctaaactatatgtttttt--gcagttttagtcctatctacctatttccaactctggaaacgcaaataaatgatagttttagtccaaccac 16298851  T
Q  101 ctatgttcaaccataaaataaa 122  Q
    ||||| |||||||| |||||||    
T  16298852 ctatgctcaaccatgaaataaa 16298873  T

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Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 106
Target Start/End: Complemental strand, 2868154 - 2868079
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgt 106  Q
    ||||||||||||  ||| |||||||| ||||| || ||||||||| || ||||||||| ||| ||||||| |||||    
T  2868154 gcagttttagtcatatccccctatttccaactccagaaacgcacataagtgacagttttagtccaaccacatatgt 2868079  T

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Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 4636102 - 4636163
Alignment:
Q  61 cttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||| ||||||| |||||||||||||| ||  | ||| ||||||||||||||| |||||||    
T  4636102 cttcaaaaacgcagagaaatgacagttttagacctaccccctatgttcaaccatgaaataaa 4636163  T

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Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 17088269 - 17088341
Alignment:
Q  50 cctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||||||||| ||| ||| ||||||| |||||| ||  | ||| |||||| |||||||| |||||||    
T  17088269 cctattttcaacttcagaaatgcagagaaatggcagttttagacctacctcctatgctcaaccatgaaataaa 17088341  T

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Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 50926351 - 50926423
Alignment:
Q  50 cctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||| || |||| |||| |||||  ||||| ||| |||||||||||| || ||||| |||||||    
T  50926351 cctattttcaactccagaaacacacataaatggtagttttagtccaaccacctatgctctaccatgaaataaa 50926423  T

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Target: scaffold0712 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 6492 - 6583
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||| ||||||| |||||||| |||||||||||||||||||||| | | ||||||| |||| ||||||||||||||||    
T  6492 gcagttttagtcctatcttcctatttccaacttcagaaacgcacagaaatgacagttttattccaaccacatatgctcaaccataaaataaa 6583  T

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Target: scaffold0712; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 6823 - 6746
Alignment:
Q  45 atctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||||||||||| || |||||||||||||||||||||| ||| ||||||| |||| |||||||| |||||||    
T  6823 atctccctattttcaactccagaaacgcacagaaatgacagttttagtccaaccacatatgctcaaccatgaaataaa 6746  T

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Target: scaffold0709 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 6510 - 6601
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||| ||||||| |||||||| |||||||||||||||||||||| | | ||||||| |||| ||||||||||||||||    
T  6510 gcagttttagtcctatcttcctatttccaacttcagaaacgcacagaaatgacagttttattccaaccacatatgctcaaccataaaataaa 6601  T

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Target: scaffold0709; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 6841 - 6764
Alignment:
Q  45 atctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||||||||||||| || |||||||||||||||||||||| ||| ||||||| |||| |||||||| |||||||    
T  6841 atctccctattttcaactccagaaacgcacagaaatgacagttttagtccaaccacatatgctcaaccatgaaataaa 6764  T

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Target: scaffold0097 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 46367 - 46458
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||  |||||||||||| ||| | |||||| ||||| |||||||||||| ||| |||||||||||| |||||||| |||||||    
T  46367 gcagttttagtcatatctccctatttccaattccataaatgcacaaaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa 46458  T

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Target: scaffold0097; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 46695 - 46622
Alignment:
Q  49 ccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    |||||||| ||||| || ||||||||| |||||||| |||  || |||||||||||| |||| ||| |||||||    
T  46695 ccctatttccaactccaaaaacgcacataaatgacaattttggtccaaccacctatgctcaatcatgaaataaa 46622  T

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Target: scaffold0025 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 120
Target Start/End: Original strand, 78417 - 78506
Alignment:
Q  31 gcagttttagtctcatctccctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaata 120  Q
    ||||||||||||  ||||| |||||| ||||| || ||| ||| |||||||||| ||| ||| |||||||||||| |||||||| |||||    
T  78417 gcagttttagtcctatctctctatttccaactccagaaatgcatagaaatgacaattttagtccaaccacctatgctcaaccatgaaata 78506  T

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Target: scaffold0108 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 80
Target Start/End: Original strand, 15231 - 15261
Alignment:
Q  50 cctattttcaacttcataaacgcacagaaat 80  Q
    |||||||||||||||||||||||||||||||    
T  15231 cctattttcaacttcataaacgcacagaaat 15261  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 205795 - 205723
Alignment:
Q  50 cctattttcaacttcataaacgcacagaaatgacagtttcagttcaaccacctatgttcaaccataaaataaa 122  Q
    ||||||||||||| || ||||||| ||||||| |||||| ||  | ||| |||||| |||||||| |||||||    
T  205795 cctattttcaactccaaaaacgcagagaaatggcagttttagacctaccccctatgctcaaccatgaaataaa 205723  T

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