View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20909_high_26 (Length: 247)
Name: NF20909_high_26
Description: NF20909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20909_high_26 |
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Alignment Details
Target: chr3 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 3618588 - 3618820
Alignment:
| Q |
1 |
tttggaaagaacagatcatagtttgatggaaaactggttttgaactcataagaacaagtttcaatctacagtttctatgattaagccttgtgcatgcatt |
100 |
Q |
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| T |
3618588 |
tttggaaagaacagatcatagtttgatggaaaactggttttgaactcataagaacaagtttcaatctacagtttctatgattaagccttgtgcatgcatt |
3618687 |
T |
|
| Q |
101 |
atctttccatagaaacaaatagtgcatatgattctgaaatgcattagccaaacttttgcaaaaaatattgtctggtttcatgaatgtaaacagcatgttc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3618688 |
atctttccatagaaacaaatagtgcatatgattctgaaatgcattagccaaacttttgcaaaaaatattgtctggtttcatgaatgtaaacagcatgttc |
3618787 |
T |
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| Q |
201 |
aaccagtgtcctcaatcaagcatcactaaaaat |
233 |
Q |
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|||||||||| |||||||||||||||||||||| |
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| T |
3618788 |
aaccagtgtcgtcaatcaagcatcactaaaaat |
3618820 |
T |
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