View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20909_low_30 (Length: 249)

Name: NF20909_low_30
Description: NF20909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20909_low_30
NF20909_low_30
[»] chr5 (23 HSPs)
chr5 (1-195)||(2211128-2211339)
chr5 (1-95)||(5246513-5246605)
chr5 (1-96)||(1349655-1349748)
chr5 (1-60)||(35781642-35781701)
chr5 (5-96)||(19134763-19134852)
chr5 (1-96)||(28794001-28794094)
chr5 (1-96)||(35040406-35040500)
chr5 (1-58)||(35040154-35040211)
chr5 (1-93)||(35781368-35781458)
chr5 (1-62)||(38184291-38184351)
chr5 (1-62)||(38214006-38214066)
chr5 (16-96)||(19135030-19135110)
chr5 (5-96)||(34383382-34383471)
chr5 (11-62)||(43582984-43583033)
chr5 (1-94)||(5249349-5249440)
chr5 (137-175)||(6429392-6429430)
chr5 (137-175)||(19135168-19135206)
chr5 (5-89)||(1349244-1349326)
chr5 (5-96)||(12545887-12545977)
chr5 (10-67)||(18585688-18585745)
chr5 (13-62)||(35039764-35039813)
chr5 (1-62)||(35040984-35041045)
chr5 (136-195)||(35781517-35781578)
[»] chr7 (23 HSPs)
chr7 (1-96)||(26246628-26246721)
chr7 (1-96)||(38319943-38320036)
chr7 (1-96)||(47222539-47222633)
chr7 (1-96)||(10283301-10283394)
chr7 (1-96)||(40261908-40262001)
chr7 (1-62)||(5801076-5801138)
chr7 (1-62)||(21696825-21696885)
chr7 (1-96)||(23640757-23640850)
chr7 (1-92)||(23808938-23809027)
chr7 (1-96)||(24688788-24688881)
chr7 (1-96)||(26970416-26970509)
chr7 (1-96)||(30121918-30122011)
chr7 (34-96)||(29854709-29854769)
chr7 (1-94)||(33857999-33858090)
chr7 (1-62)||(24162207-24162268)
chr7 (1-96)||(35526476-35526572)
chr7 (1-96)||(44434682-44434776)
chr7 (1-62)||(24689338-24689401)
chr7 (1-96)||(26970721-26970814)
chr7 (5-95)||(21696475-21696562)
chr7 (1-62)||(1644532-1644593)
chr7 (1-62)||(46897939-46898000)
chr7 (1-57)||(14312497-14312553)
[»] chr6 (9 HSPs)
chr6 (1-96)||(2258701-2258794)
chr6 (1-95)||(33438664-33438755)
chr6 (5-90)||(14094064-14094147)
chr6 (1-94)||(26001251-26001342)
chr6 (1-96)||(21980907-21981000)
chr6 (1-96)||(26209120-26209215)
chr6 (34-174)||(7204717-7204858)
chr6 (34-62)||(9740613-9740641)
chr6 (5-88)||(10780177-10780258)
[»] chr4 (14 HSPs)
chr4 (2-96)||(2494078-2494170)
chr4 (1-96)||(41692433-41692526)
chr4 (5-96)||(54175838-54175927)
chr4 (5-62)||(53130887-53130944)
chr4 (1-96)||(7238891-7238984)
chr4 (1-96)||(44886171-44886265)
chr4 (1-96)||(19298516-19298611)
chr4 (5-62)||(36889705-36889762)
chr4 (5-96)||(49897354-49897443)
chr4 (137-175)||(7238785-7238823)
chr4 (13-62)||(4780686-4780735)
chr4 (5-62)||(29618243-29618300)
chr4 (1-49)||(24739112-24739160)
chr4 (137-173)||(45133011-45133047)
[»] chr1 (26 HSPs)
chr1 (1-96)||(33674978-33675071)
chr1 (2-96)||(43325957-43326049)
chr1 (2-96)||(48738494-48738586)
chr1 (1-96)||(6844461-6844554)
chr1 (1-96)||(24686191-24686284)
chr1 (1-95)||(49243777-49243869)
chr1 (1-62)||(47795466-47795527)
chr1 (1-96)||(17054225-17054318)
chr1 (1-96)||(33241077-33241170)
chr1 (1-96)||(47795057-47795150)
chr1 (1-96)||(42834907-42834998)
chr1 (1-62)||(6318694-6318756)
chr1 (1-88)||(26271931-26272017)
chr1 (1-96)||(45296770-45296864)
chr1 (1-62)||(49480273-49480334)
chr1 (5-96)||(43114959-43115048)
chr1 (2-62)||(47795935-47795995)
chr1 (1-95)||(47796286-47796378)
chr1 (1-62)||(11981711-11981771)
chr1 (137-174)||(42429756-42429793)
chr1 (5-62)||(46675732-46675789)
chr1 (34-90)||(47794817-47794871)
chr1 (34-93)||(6318940-6318997)
chr1 (137-195)||(6844623-6844683)
chr1 (137-195)||(24686352-24686412)
chr1 (137-195)||(47794930-47794990)
[»] chr3 (33 HSPs)
chr3 (11-93)||(10297423-10297503)
chr3 (1-96)||(8708018-8708111)
chr3 (1-96)||(9059905-9059998)
chr3 (1-96)||(24842476-24842568)
chr3 (9-96)||(46515033-46515118)
chr3 (1-96)||(54356269-54356362)
chr3 (1-96)||(10333101-10333194)
chr3 (1-96)||(21388414-21388507)
chr3 (5-96)||(40285037-40285126)
chr3 (1-96)||(45586100-45586193)
chr3 (1-96)||(54981887-54981980)
chr3 (5-93)||(11633068-11633154)
chr3 (1-92)||(21459614-21459703)
chr3 (1-96)||(26760565-26760658)
chr3 (5-96)||(30498432-30498521)
chr3 (16-93)||(10317246-10317321)
chr3 (1-59)||(24485623-24485681)
chr3 (1-62)||(3942604-3942665)
chr3 (12-65)||(33832809-33832862)
chr3 (2-59)||(42583594-42583651)
chr3 (5-65)||(3789734-3789794)
chr3 (1-92)||(7433598-7433687)
chr3 (34-92)||(30917800-30917856)
chr3 (137-175)||(3942460-3942498)
chr3 (5-94)||(12101065-12101152)
chr3 (5-62)||(26167913-26167973)
chr3 (36-66)||(43185627-43185657)
chr3 (1-62)||(10332711-10332771)
chr3 (1-30)||(54981664-54981693)
chr3 (137-195)||(21388283-21388343)
chr3 (1-96)||(47567631-47567724)
chr3 (1-96)||(53877641-53877734)
chr3 (1-96)||(54142993-54143086)
[»] chr8 (22 HSPs)
chr8 (1-65)||(28022359-28022423)
chr8 (5-62)||(342712-342769)
chr8 (1-62)||(13916532-13916593)
chr8 (1-92)||(5424492-5424580)
chr8 (5-65)||(27882183-27882243)
chr8 (1-96)||(35308136-35308231)
chr8 (1-96)||(5424770-5424864)
chr8 (1-62)||(27881312-27881373)
chr8 (1-62)||(27917535-27917596)
chr8 (1-62)||(27963954-27964015)
chr8 (1-62)||(28021493-28021554)
chr8 (1-96)||(6007671-6007764)
chr8 (2-62)||(40737426-40737486)
chr8 (1-59)||(27964814-27964872)
chr8 (1-96)||(5764880-5764973)
chr8 (5-62)||(1030384-1030441)
chr8 (1-62)||(6008028-6008089)
chr8 (137-195)||(1028926-1028986)
chr8 (137-195)||(1153924-1153984)
chr8 (1-96)||(17073286-17073379)
chr8 (1-96)||(17574891-17574984)
chr8 (5-65)||(24981511-24981571)
[»] chr2 (21 HSPs)
chr2 (1-96)||(14787201-14787294)
chr2 (5-96)||(40662750-40662839)
chr2 (5-94)||(43968210-43968297)
chr2 (1-92)||(15458946-15459035)
chr2 (13-92)||(30632215-30632292)
chr2 (5-62)||(3196995-3197052)
chr2 (1-61)||(7495584-7495644)
chr2 (13-95)||(30666273-30666353)
chr2 (7-96)||(20612700-20612787)
chr2 (4-96)||(39844212-39844302)
chr2 (1-93)||(43968562-43968652)
chr2 (5-95)||(9420261-9420350)
chr2 (1-92)||(42676465-42676554)
chr2 (1-96)||(3256102-3256197)
chr2 (13-95)||(34454177-34454257)
chr2 (1-62)||(21479406-21479468)
chr2 (1-62)||(21479209-21479270)
chr2 (5-62)||(38722851-38722908)
chr2 (137-173)||(21479567-21479603)
chr2 (13-96)||(30668856-30668937)
chr2 (1-88)||(36950336-36950421)
[»] scaffold0016 (2 HSPs)
scaffold0016 (1-96)||(205245-205337)
scaffold0016 (1-96)||(106072-106165)
[»] scaffold0224 (1 HSPs)
scaffold0224 (1-96)||(21988-22079)
[»] scaffold0376 (1 HSPs)
scaffold0376 (2-96)||(1938-2029)
[»] scaffold0267 (1 HSPs)
scaffold0267 (14-65)||(3243-3294)
[»] scaffold0024 (1 HSPs)
scaffold0024 (5-96)||(150191-150280)


Alignment Details
Target: chr5 (Bit Score: 103; Significance: 2e-51; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 2211339 - 2211128
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctccact- 99  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||     
T  2211339 aaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaa--tttaatattttaaaccatattttctctctccacta 2211242  T
Q  100 nnnnnnntctattttttctagaaactgctcttaaca------------------gtttttagattctgattttattaaaaagcagtaacaaacgatgcaa 181  Q
           |||||||||||||||||||||||||||||                  ||||||||||||||||||||||||||||  ||||||||||||||||    
T  2211241 aaaaaaatctattttttctagaaactgctcttaacagtttcttattaagaaactgtttttagattctgattttattaaaaagtggtaacaaacgatgcaa 2211142  T
Q  182 caccttaaaagtga 195  Q
    ||||||||||||||    
T  2211141 caccttaaaagtga 2211128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 5246513 - 5246605
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctc 95  Q
    |||||||||||||||||||||| |||||||   ||||||||||||||||| |||||||||||   || ||| ||||||||| |||||||||||||    
T  5246513 aaacaaataatttagtttgtttggatacaactatataaaagagatttttttttacaaaatta--gttcaatcttttaaaccttattttctctctc 5246605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 1349655 - 1349748
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||||||| |||||||||| |||||||   |||||||| ||||||||||||||||||||   || ||| ||||||| ||||||||||||||||    
T  1349655 aaacaaataatctagtttgtttggatacaactatataaaagggattttttgttacaaaatta--gttcaatcttttaaatcatattttctctctcc 1349748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 35781701 - 35781642
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaat 60  Q
    ||||||||||||||||||||||||||||||   |||||||| ||||||||||||||||||    
T  35781701 aaacaaataatttagtttgttttgatacaactatataaaagggattttttgttacaaaat 35781642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 19134763 - 19134852
Alignment:
Q  5 aaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||| |||||||||| |||||||   |||||||| ||||||||||||||||||||   || ||| |||||||| |||||||||||||||    
T  19134763 aaataatctagtttgtttggatacaattatataaaagggattttttgttacaaaatta--gttcaatcttttaaacaatattttctctctcc 19134852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 28794001 - 28794094
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||||||||||||||| |||||||   |||||| | ||||||| ||||||||||||  ||| ||| ||||||||| |||||| |||||||    
T  28794001 aaacaaataatttagtttgtttggatacaactatataaacgggatttttcgttacaaaatta--tttcaatcttttaaaccgtattttttctctcc 28794094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 35040500 - 35040406
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagag-attttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||||||||||||||| |||||||   |||||||| | |||||||||||||||||||   || ||| ||||||| ||||||||||| ||||    
T  35040500 aaacaaataatttagtttgtttggatacaactatataaaagggaattttttgttacaaaatta--gttcaatcttttaaatcatattttctccctcc 35040406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 35040154 - 35040211
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaa 58  Q
    |||||||||||||||||||||| ||| ||| | ||||||||  |||||||||||||||    
T  35040154 aaacaaataatttagtttgtttggattcaaccatataaaaggaattttttgttacaaa 35040211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 35781368 - 35781458
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctc 93  Q
    ||||||| ||| ||||| |||| |||||||   ||||||| | |||||||||||||||||||   |||||| ||||||| |||||||||||||    
T  35781368 aaacaaaaaatctagttcgtttggatacaactatataaaatatattttttgttacaaaatta--gtttaatcttttaaatcatattttctctc 35781458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 38184291 - 38184351
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    |||||||||||||||||||||| | |||||   |||||||| ||||||||||||||||||||    
T  38184291 aaacaaataatttagtttgtttgggtacaactatataaaag-gattttttgttacaaaatta 38184351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 38214066 - 38214006
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    |||||||||||||||||||||| | |||||   |||||||| ||||||||||||||||||||    
T  38214066 aaacaaataatttagtttgtttgggtacaactatataaaag-gattttttgttacaaaatta 38214006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 19135030 - 19135110
Alignment:
Q  16 tttgttttgatacaaacttataaaagagatttttt--gttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||| |||||||   |||||||||||||||||  |||||||||||| ||   ||| ||||||||||||||||||||||||    
T  19135030 tttgtttggatacaactatataaaagagattttttttgttacaaaattagttc--aatcttttaaaccatattttctctctcc 19135110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 34383382 - 34383471
Alignment:
Q  5 aaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||||||| |||||| |||||||   |||||||| ||| |||||||||||||| ||  || ||| |||||| || ||||||||||||||    
T  34383382 aaataatttagattgtttggatacaactatataaaagggatattttgttacaaaatcaa--ttcaatcttttaagccttattttctctctcc 34383471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 43582984 - 43583033
Alignment:
Q  11 tttagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    |||||||||||| ||||||||  |||||||| ||||||||||||||||||||    
T  43582984 tttagtttgtttggatacaaa--tataaaagggattttttgttacaaaatta 43583033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 5249349 - 5249440
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctct 94  Q
    ||||||||||||||||| ||||  ||||||   |||||||| ||||||||||| ||||||||   || ||| ||||||| |||||||| |||||    
T  5249349 aaacaaataatttagttagtttgaatacaactatataaaagggattttttgttgcaaaatta--gttcaatcttttaaatcatattttttctct 5249440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 6429430 - 6429392
Alignment:
Q  137 tttttagattctgattttattaaaaagcagtaacaaacg 175  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  6429430 tttttagattctgatttttttaaaaagctgtaacaaacg 6429392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 175
Target Start/End: Original strand, 19135168 - 19135206
Alignment:
Q  137 tttttagattctgattttattaaaaagcagtaacaaacg 175  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  19135168 tttttagattctgatttttttaaaaagctgtaacaaacg 19135206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 1349244 - 1349326
Alignment:
Q  5 aaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttc 89  Q
    |||||||||||||||||| |||| ||   ||||||||| || ||||| ||||||||||   |||||| |||| ||||||||||||    
T  1349244 aaataatttagtttgtttagatataactatataaaagaaatgttttgatacaaaatta--gtttaatcttttgaaccatattttc 1349326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 12545977 - 12545887
Alignment:
Q  5 aaataatttagtttgttttgatacaaacttataaaagagattttttg-ttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||||||||||| ||| ||| | |||||||| ||||||||  ||||||| ||| ||   |||||||||||  |||||||||||||||    
T  12545977 aaataatttagtttgtttggattcaaccatataaaagcgatttttttattacaaatttagttc--aatattttaaattatattttctctctcc 12545887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 18585688 - 18585745
Alignment:
Q  10 atttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttt 67  Q
    ||||||||||||| |||||||   |||||||  |||||||||||||||||||| ||||    
T  18585688 atttagtttgtttggatacaactatataaaaacgattttttgttacaaaattactttt 18585745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 35039813 - 35039764
Alignment:
Q  13 tagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    |||||||||| |||||||   |||||||| ||||||||||||||||||||    
T  35039813 tagtttgtttggatacaactatataaaagggattttttgttacaaaatta 35039764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 35040984 - 35041045
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    ||||||||||| |||||||||  |||||||   |||||| |||||||| |||||||||||||    
T  35040984 aaacaaataatctagtttgttaggatacaactatataaatgagattttatgttacaaaatta 35041045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 35781517 - 35781578
Alignment:
Q  136 gtttttagattctgattttattaaaaagcagtaacaaac-gatgcaacac-cttaaaagtga 195  Q
    ||||||||||||||| ||| ||||||||| ||||||||| ||||||| || |||||||||||    
T  35781517 gtttttagattctgagttttttaaaaagctgtaacaaacggatgcaaaactcttaaaagtga 35781578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 26246721 - 26246628
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||||||| || ||||||| |||||||  ||||||||||||||||||||||||||||||   |||||| ||||||||| ||||||||||||||    
T  26246721 aaacaaataatctaatttgtttggatacaactttataaaagagattttttgttacaaaatta--gtttaatcttttaaaccctattttctctctcc 26246628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 38319943 - 38320036
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||||||| |||||||||| |||||||   |||||||||||||||||||||||||||||   || ||| |||||||||||||||||| |||||    
T  38319943 aaacaaataatctagtttgtttggatacaactatataaaagagattttttgttacaaaatta--gttcaatcttttaaaccatattttctatctcc 38320036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 47222633 - 47222539
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaa-gagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||||||| ||||||| |||| ||   ||||||| ||||||||||||||||||||||   || ||| ||||||||||||||||||||||||    
T  47222633 aaacaaataatttaatttgtttggatataactatataaaaagagattttttgttacaaaatta--gttcaatcttttaaaccatattttctctctcc 47222539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 10283394 - 10283301
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||||||||||||||| ||||||    |||||||| ||||||||||||||||||||   || |||  |||||||||||||| ||||||||    
T  10283394 aaacaaataatttagtttgtttcgatacagctatataaaagggattttttgttacaaaatta--gttcaatcgtttaaaccatatttcctctctcc 10283301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 40261908 - 40262001
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||||||||||||||| |||||||   |||||||  | ||||||||||||||||||   || ||||||||||| ||||||||| ||||||    
T  40261908 aaacaaataatttagtttgtttggatacaactatataaaaagggttttttgttacaaaatta--gttcaatattttaaaacatattttccctctcc 40262001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5801138 - 5801076
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagatt-ttttgttacaaaatta 62  Q
    |||||||||||||||||||||| |||||||   ||||||||||||| ||||||||||||||||    
T  5801138 aaacaaataatttagtttgtttggatacaactatataaaagagatttttttgttacaaaatta 5801076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 21696885 - 21696825
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    |||||||||||||| ||||||| |||||||   |||||||||||||||||||||||||||||    
T  21696885 aaacaaataatttactttgttt-gatacaactatataaaagagattttttgttacaaaatta 21696825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 23640850 - 23640757
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||||||| |||| || |||||||   ||||||||||||||||| |||||||||||   || ||| |||||| | |||||||||||||||    
T  23640850 aaacaaataatttaatttggttggatacaactctataaaagagatttttttttacaaaatta--gttcaatcttttaatctatattttctctctcc 23640757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 23809027 - 23808938
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctct 92  Q
    ||||||||||||||||||  || |||||||   |||||||| ||||||| |||||||||||||||    || ||||||||||||||||||||    
T  23809027 aaacaaataatttagtttagttggatacaactatataaaagggatttttcgttacaaaattaattag--attttttaaaccatattttctct 23808938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 24688881 - 24688788
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||||||||||||||   ||||||   |||||||  ||||||||||||| |||||| ||   ||| ||||||||||||||||||||||||    
T  24688881 aaacaaataatttagtttgttcgaatacaactatataaaaatgattttttgttaccaaattagttc--aatcttttaaaccatattttctctctcc 24688788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 26970509 - 26970416
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||||||||||||||| |||||||   ||| |||  ||||||||||||||||||||   || ||| ||||||| |||||||| |||||||    
T  26970509 aaacaaataatttagtttgtttggatacaactatatgaaaatgattttttgttacaaaatta--gttcaatgttttaaatcatattttatctctcc 26970416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 30122011 - 30121918
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||||||||||||||| |||||||   |||||||   |||||||||||||||||||   || ||| |||||| |||||||||||| ||||    
T  30122011 aaacaaataatttagtttgtttggatacaactatataaaaagaattttttgttacaaaatta--gttcaatcttttaatccatattttctccctcc 30121918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 29854709 - 29854769
Alignment:
Q  34 tataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||||||||| ||||||||||||   || |||||||| |||||||||||||||||||    
T  29854709 tataaaagagatttttcgttacaaaatta--gttcaatattttgaaccatattttctctctcc 29854769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 33858090 - 33857999
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctct 94  Q
    ||||||||||||| |||| ||| |||||||   ||||||||||||||||||||| |||||||   |||||| |||| || |||||||| |||||    
T  33858090 aaacaaataattttgtttatttggatacaactatataaaagagattttttgttaaaaaatta--gtttaatcttttgaatcatattttatctct 33857999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 24162268 - 24162207
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    ||||||||||| |||||||||| ||| ||    |||||||||||||||||||||||||||||    
T  24162268 aaacaaataatctagtttgtttggatgcatctatataaaagagattttttgttacaaaatta 24162207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 35526476 - 35526572
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagaga---ttttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||||||||||||||| |||||||   |||||||| ||   ||||||||||||||||||   |||||| |||||||  |||||||||| ||||    
T  35526476 aaacaaataatttagtttgtttggatacaactatataaaagggatttttttttgttacaaaatta--gtttaatcttttaaattatattttctcgctcc 35526572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 44434776 - 44434682
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagat-tttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||||||||||||||| |||||||   |||||||||||| |||||| ||||||| ||  ||| ||| ||||||  |||| |||||||||||    
T  44434776 aaacaaataatttagtttgtttggatacaactatataaaagagatatttttgatacaaaacta--tttcaatcttttaattcataatttctctctcc 44434682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 24689338 - 24689401
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagaga--ttttttgttacaaaatta 62  Q
    ||||||||||| |||||||||| |||||||   |||||||||||  ||||||||||||||||||    
T  24689338 aaacaaataatctagtttgtttggatacaactatataaaagagattttttttgttacaaaatta 24689401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 26970721 - 26970814
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||||||| |||||||  | |||||||   |||||||| || |||||||||||||||||   || ||| |||||||| |||||||||||||||    
T  26970721 aaacaaataatctagtttgcatggatacaattatataaaagggactttttgttacaaaatta--gttcaatcttttaaacaatattttctctctcc 26970814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 21696475 - 21696562
Alignment:
Q  5 aaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctc 95  Q
    ||||| |||||||||||| |||||||   |||||||| ||||||||||||||||||||   || ||| |||| || |||||||||||||||    
T  21696475 aaatagtttagtttgtttggatacaactatataaaag-gattttttgttacaaaatta--gttcaatcttttgaatcatattttctctctc 21696562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1644532 - 1644593
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    ||||||||||| ||||||||||| ||||||   |||||  | ||||||||||||||||||||    
T  1644532 aaacaaataatctagtttgttttaatacaactatataattgggattttttgttacaaaatta 1644593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 46897939 - 46898000
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    ||||||||||| |||||||||| |||| ||    ||||||| ||||||||||||||||||||    
T  46897939 aaacaaataatctagtttgtttggatataactagataaaagggattttttgttacaaaatta 46898000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 14312553 - 14312497
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaa 57  Q
    |||||||||||||| ||||||| |||||||   |||||||  |||||||||||||||    
T  14312553 aaacaaataatttaatttgtttagatacaactatataaaaaggattttttgttacaa 14312497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 2258794 - 2258701
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||   || ||| ||||||| ||||||||||||||||    
T  2258794 aaacaaataatctagtttgttttgatacaactatataaaagagattttttgttacaaaatta--gttcaatcttttaaatcatattttctctctcc 2258701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 33438664 - 33438755
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctc 95  Q
    ||||||||||||||||||||||  ||||||   ||||||||||| ||||||||| |||||||   || ||| |||||||||||||||||||||||    
T  33438664 aaacaaataatttagtttgtttgaatacaactatataaaagaga-tttttgttaaaaaatta--gttcaatcttttaaaccatattttctctctc 33438755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 14094147 - 14094064
Alignment:
Q  5 aaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttct 90  Q
    |||||||||||||||||| |||||||   |||||||| |||||||||||| ||||||||  |||||| |||| | |||||||||||    
T  14094147 aaataatttagtttgtttggatacaactatataaaagcgattttttgttataaaattaa--tttaattttttgatccatattttct 14094064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 26001342 - 26001251
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctct 94  Q
    |||||||||||||||||| ||| |||||||   ||||||||||||||||||||| |||||||   ||||||||||| ||  ||||||| |||||    
T  26001342 aaacaaataatttagtttatttggatacaactatataaaagagattttttgttaaaaaatta--gtttaatattttgaattatattttgtctct 26001251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 21980907 - 21981000
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||||||| |||||||||| |||||||   ||||||||  |||||||||||||||||||   || ||| |||||||  |||||||||||||||    
T  21980907 aaacaaataatgtagtttgtttggatacaactatataaaaggaattttttgttacaaaatta--gttcaatcttttaaaaaatattttctctctcc 21981000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 26209120 - 26209215
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaa--acttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||||||| ||||||| |||||||  |  |||| ||| ||||||||||||||||||||   ||||||||||||||   ||||||||||||||    
T  26209120 aaacaaataatttaatttgtttagatacaactatatatataagggattttttgttacaaaatta--gtttaatattttaaattctattttctctctcc 26209215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 174
Target Start/End: Complemental strand, 7204858 - 7204717
Alignment:
Q  34 tataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctccact-nnnnnnntctattttttctagaaactgctctta 132  Q
    |||||||||||||||||||||||||||||   || ||| ||||||| |||||||| ||||||| ||        ||||||||||  |||| |||||||||    
T  7204858 tataaaagagattttttgttacaaaatta--gttcaatcttttaaatcatattttttctctcctctaaaaaaaatctatttttt-gagaagctgctctta 7204762  T
Q  133 aca--gtttttagattctga-ttttattaaaaagcagtaacaaac 174  Q
    |||  ||||||||||||||| |||| ||||||||  |||||||||    
T  7204761 acaatgtttttagattctgattttttttaaaaagttgtaacaaac 7204717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 62
Target Start/End: Complemental strand, 9740641 - 9740613
Alignment:
Q  34 tataaaagagattttttgttacaaaatta 62  Q
    |||||||||||||||||||||||||||||    
T  9740641 tataaaagagattttttgttacaaaatta 9740613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 10780258 - 10780177
Alignment:
Q  5 aaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatatttt 88  Q
    ||||||||||||||||||  ||||||   ||||||| ||||||||||||| |||| ||   || ||| ||||||||||||||||    
T  10780258 aaataatttagtttgtttgtatacaactatataaaatagattttttgttagaaaacta--gttcaatcttttaaaccatatttt 10780177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 6e-21; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 2494170 - 2494078
Alignment:
Q  2 aacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||  |||||||||| |||||||   ||||||||||||||||||||||||||||||  || ||||||||||| ||||||||||||||||    
T  2494170 aacaaataacctagtttgtttggatacaactatataaaagagattttttgttacaaaattaa--ttcaatattttaaatcatattttctctctcc 2494078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 41692433 - 41692526
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||| ||||||||||||||||| |||||||   |||||||  |||||||||||||||||||||  || ||| ||||||| ||||||||||||||||    
T  41692433 aaactaataatttagtttgtttggatacaattatataaaaaggattttttgttacaaaattaa--ttcaatcttttaaatcatattttctctctcc 41692526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 54175838 - 54175927
Alignment:
Q  5 aaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||| |||||||||| |||||||   |||||||| ||||||||||||||||||||   || ||| ||||||||||||||||||||||||    
T  54175838 aaataatctagtttgtttggatacaactatataaaagggattttttgttacaaaatta--gttcaatcttttaaaccatattttctctctcc 54175927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 53130944 - 53130887
Alignment:
Q  5 aaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    |||||||||||||||||| |||||||   |||||||||||||||||||||||||||||    
T  53130944 aaataatttagtttgtttggatacaactatataaaagagattttttgttacaaaatta 53130887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 7238984 - 7238891
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||||||| |||||||||| |||||||   |||||||| || |||||||||||||||||   || ||| |||||||| |||||||||||||||    
T  7238984 aaacaaataatctagtttgtttggatacaactatataaaagggaatttttgttacaaaatta--gttcaatcttttaaacaatattttctctctcc 7238891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 44886171 - 44886265
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagaga-ttttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||||||||||| ||| |||||||   |||||||| || ||||||||||||||||||   || ||| ||||||| ||||||||||||||||    
T  44886171 aaacaaataatttagtttttttggatacaactatataaaagggatttttttgttacaaaatta--gttcaatcttttaaatcatattttctctctcc 44886265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 19298611 - 19298516
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagaga--ttttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||||||||||||||||||  ||||||   |||||||| ||  ||||||||||||||||||   || ||| ||||||| ||||||||||||||||    
T  19298611 aaacaaataatttagtttgtttgaatacaactatataaaagggattttttttgttacaaaatta--gttcaatcttttaaatcatattttctctctcc 19298516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 36889762 - 36889705
Alignment:
Q  5 aaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    |||||||||||||||||| |||||||   |||||||  ||||||||||||||||||||    
T  36889762 aaataatttagtttgtttggatacaacggtataaaaatgattttttgttacaaaatta 36889705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 49897443 - 49897354
Alignment:
Q  5 aaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||| |||||||||| |||||||   |||||||| |||| |||||||||||||||   || ||| |||||||| |||||||||| ||||    
T  49897443 aaataatctagtttgtttggatacaactatataaaagggattatttgttacaaaatta--gttcaatcttttaaacaatattttctccctcc 49897354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 7238823 - 7238785
Alignment:
Q  137 tttttagattctgattttattaaaaagcagtaacaaacg 175  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  7238823 tttttagattctgatttttttaaaaagctgtaacaaacg 7238785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 4780735 - 4780686
Alignment:
Q  13 tagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    |||||||||| |||||||   ||||||||||||||||| |||||||||||    
T  4780735 tagtttgtttggatacaactatataaaagagattttttattacaaaatta 4780686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 29618243 - 29618300
Alignment:
Q  5 aaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    |||||||||||||||||| |||||||   ||||||| |||||| || |||||||||||    
T  29618243 aaataatttagtttgtttagatacaactatataaaaaagatttgttattacaaaatta 29618300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 24739160 - 24739112
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttt 49  Q
    |||||||||||||||||||||| |||||||   |||||||| |||||||    
T  24739160 aaacaaataatttagtttgtttggatacaattatataaaagggattttt 24739112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 173
Target Start/End: Original strand, 45133011 - 45133047
Alignment:
Q  137 tttttagattctgattttattaaaaagcagtaacaaa 173  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  45133011 tttttagattctgatttttttaaaaagctgtaacaaa 45133047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 33674978 - 33675071
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||||||| |||| || |||||||   ||||||||||||||||||||||||||||||  || ||| |||||||| |||||||||||||||    
T  33674978 aaacaaataatttaatttgattggatacaactatataaaagagattttttgttacaaaattaa--ttcaatcttttaaacaatattttctctctcc 33675071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 43326049 - 43325957
Alignment:
Q  2 aacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||||||||| ||||||| |||||||   |||||||| ||||||||||||||||||||   |||||| ||||||| ||||||||||||||||    
T  43326049 aacaaataatttaatttgtttggatacaattatataaaagggattttttgttacaaaatta--gtttaatcttttaaaacatattttctctctcc 43325957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 48738494 - 48738586
Alignment:
Q  2 aacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||||||||||||||||| |||||||   |||||||| ||||||||||||||||||||   || ||| |||||||| |||||||||||||||    
T  48738494 aacaaataatttagtttgtttagatacaactgtataaaagtgattttttgttacaaaatta--gttcaatcttttaaacaatattttctctctcc 48738586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 6844461 - 6844554
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||||||| |||||||||| ||| |||   |||||||||||||||||||||||||||||   |||||| |||||||  |||||||||||||||    
T  6844461 aaacaaataatctagtttgtttggatgcaactatataaaagagattttttgttacaaaatta--gtttaatcttttaaataatattttctctctcc 6844554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 24686191 - 24686284
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||||||| |||||||||| ||||||    |||||||| ||||||||||||||||||||   || ||| |||||| |||||||||||||||||    
T  24686191 aaacaaataatctagtttgtttggatacagctatataaaagcgattttttgttacaaaatta--gttcaatcttttaatccatattttctctctcc 24686284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 49243777 - 49243869
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctc 95  Q
    ||||||||||| |||||||||| |||||||   |||||||| ||||||||||||||||||||   || ||| |||||||  ||||||||||||||    
T  49243777 aaacaaataatctagtttgtttggatacaactatataaaagggattttttgttacaaaatta--gttcaatcttttaaaagatattttctctctc 49243869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 47795527 - 47795466
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    ||||||||||| |||||||||||||||| |   |||||||| ||||||||||||||||||||    
T  47795527 aaacaaataatctagtttgttttgatacgactatataaaagggattttttgttacaaaatta 47795466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 17054225 - 17054318
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||||||| |||||||||| |||||||   |||||||   |||||||||||||||||||   || ||| |||||||| |||||||||||||||    
T  17054225 aaacaaataatctagtttgtttcgatacaactatataaaatgaattttttgttacaaaatta--gttcaatcttttaaacaatattttctctctcc 17054318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 33241077 - 33241170
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||||||||||||||| ||| ||| | |||||||| |||| ||||||||||| |||   || |||||||||||  |||||||||| ||||    
T  33241077 aaacaaataatttagtttgtttagattcaaccatataaaagggattctttgttacaaattta--gttcaatattttaaattatattttctccctcc 33241170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 47795150 - 47795057
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||||||| ||| ||| ||||||||  |||||||  ||||||||||||||||||||   || ||  ||||||| ||||||||||||||||    
T  47795150 aaacaaataatttattttttttggatacaaatatataaaatggattttttgttacaaaatta--gttcaaacttttaaatcatattttctctctcc 47795057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 42834907 - 42834998
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaact-tataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||||||||||||||| ||||   ||| |||||||| ||||||||||||||||||||   || ||| |||||| | |||||||||||||||    
T  42834907 aaacaaataatttagtttgtttggata---actatataaaagggattttttgttacaaaatta--gttcaatcttttaatctatattttctctctcc 42834998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6318756 - 6318694
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttat-aaaagagattttttgttacaaaatta 62  Q
    |||||||||||||||||||||||||||||| | ||| |||||| ||||| |||||| ||||||    
T  6318756 aaacaaataatttagtttgttttgatacaaccgtataaaaagaaattttatgttacgaaatta 6318694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 26271931 - 26272017
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagaga-ttttttgttacaaaattaatttttaatattttaaaccatatttt 88  Q
    ||||||||||||||||||||||  ||||||   ||||||||||| |||||| |||||||||||   || ||| ||||||||||||||||    
T  26271931 aaacaaataatttagtttgtttcaatacaactatataaaagagatttttttattacaaaatta--gttcaatcttttaaaccatatttt 26272017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 45296864 - 45296770
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaa-gagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||||| ||||||||||||  ||||||  ||| |||| |||||||||| |||||||||||   || ||| |||||||| |||||||||||||||    
T  45296864 aaacaaatagtttagtttgtttgaatacaactttacaaaaagagattttttattacaaaatta--gttcaatcttttaaactatattttctctctcc 45296770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 49480334 - 49480273
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    ||||||||||| ||||||||||||||||||   | ||||||  |||||||||||||||||||    
T  49480334 aaacaaataatctagtttgttttgatacaactatgtaaaaggaattttttgttacaaaatta 49480273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 43115048 - 43114959
Alignment:
Q  5 aaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||||||||||| ||||||    |||||||  ||||||||||||||||||||   |||||| ||| || | |||||||||||||||    
T  43115048 aaataatttagtttgtttggatacagctatataaaatcgattttttgttacaaaatta--gtttaatctttaaatctatattttctctctcc 43114959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 47795935 - 47795995
Alignment:
Q  2 aacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    |||||||||| |||||||||||||||| |   ||||||||  |||||||||||||||||||    
T  47795935 aacaaataatctagtttgttttgatacgactatataaaaggaattttttgttacaaaatta 47795995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 47796286 - 47796378
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctc 95  Q
    ||||||||||| | |||||||| |||||||   ||||||||| ||||||| ||||||||||| || |  || |||||||  ||||||||||||||    
T  47796286 aaacaaataatctcgtttgtttagatacaactatataaaagaaattttttattacaaaattagttct--atcttttaaagaatattttctctctc 47796378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 11981711 - 11981771
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    ||||||||||| |||||||||| |||||||   |||||||| || |||||||||||||||||    
T  11981711 aaacaaataatctagtttgtttggatacaactatataaaaggga-tttttgttacaaaatta 11981771  T

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Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 174
Target Start/End: Original strand, 42429756 - 42429793
Alignment:
Q  137 tttttagattctgattttattaaaaagcagtaacaaac 174  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  42429756 tttttagattctgatttttttaaaaagctgtaacaaac 42429793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 46675789 - 46675732
Alignment:
Q  5 aaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    |||||||||||||||||  ||||||    | |||||||||||||||||||||||||||    
T  46675789 aaataatttagtttgttaggatacacctatgtaaaagagattttttgttacaaaatta 46675732  T

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Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 47794871 - 47794817
Alignment:
Q  34 tataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttct 90  Q
    |||||||| ||||||||||||||||||||   || ||| ||||||||||||||||||    
T  47794871 tataaaagggattttttgttacaaaatta--gttcaatcttttaaaccatattttct 47794817  T

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Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 6318940 - 6318997
Alignment:
Q  34 tataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctc 93  Q
    |||||||| ||||||||||||||||||||   || ||| |||||| ||||||||||||||    
T  6318940 tataaaagggattttttgttacaaaatta--gttcaatcttttaatccatattttctctc 6318997  T

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Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 6844623 - 6844683
Alignment:
Q  137 tttttagattctgattttattaaaaagcagtaacaaac-gatgcaacac-cttaaaagtga 195  Q
    |||||||||||||||||| ||||||||  ||||||||| ||||||| || |||||||||||    
T  6844623 tttttagattctgatttttttaaaaagttgtaacaaacggatgcaaaactcttaaaagtga 6844683  T

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Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 24686352 - 24686412
Alignment:
Q  137 tttttagattctgattttattaaaaagcagtaacaaac-gatgcaacac-cttaaaagtga 195  Q
    |||||||||||||||||| ||||||||  ||||||||| ||||||| || |||||||||||    
T  24686352 tttttagattctgatttttttaaaaagttgtaacaaacggatgcaatactcttaaaagtga 24686412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 195
Target Start/End: Complemental strand, 47794990 - 47794930
Alignment:
Q  137 tttttagattctgattttattaaaaagcagtaacaaac-gatgcaacac-cttaaaagtga 195  Q
    |||||||||||||||||| ||||||||  ||||||||| ||||||| || |||||||||||    
T  47794990 tttttagattctgatttttttaaaaagttgtaacaaacggatgcaaaactcttaaaagtga 47794930  T

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Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 10297423 - 10297503
Alignment:
Q  11 tttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctc 93  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||   || ||| ||| |||||||||||||||||    
T  10297423 tttagtttgttttgatacaaatatataaaagagattttttgttacaaaatta--gttcaatttttaaaaccatattttctctc 10297503  T

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Target: chr3; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 8708018 - 8708111
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||||||| | ||||||||||||||||   ||||||||| |||||||||||||||||||   || ||| ||||||| ||||||||||||||||    
T  8708018 aaacaaataatcttgtttgttttgatacaactatataaaagaaattttttgttacaaaatta--gttcaatcttttaaatcatattttctctctcc 8708111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 9059905 - 9059998
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||||||| | ||||||||||||||||   ||||||||| |||||||||||||||||||   || ||| ||||||| ||||||||||||||||    
T  9059905 aaacaaataatcttgtttgttttgatacaactatataaaagaaattttttgttacaaaatta--gttcaatcttttaaatcatattttctctctcc 9059998  T

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Target: chr3; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 24842568 - 24842476
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||||||||||||||| |||||||   |||||||||| ||||||||||||||||||   || ||||||||||| ||||||||||| ||||    
T  24842568 aaacaaataatttagtttgtttggatacaactatataaaagag-ttttttgttacaaaatta--gttcaatattttaaatcatattttctccctcc 24842476  T

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Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 46515033 - 46515118
Alignment:
Q  9 aatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||||||  |||||||   |||||||||||||||||| ||||||||||   || ||||||||||||||||||||||||||||    
T  46515033 aatttagtttgttcagatacaacaatataaaagagattttttgatacaaaatta--gttcaatattttaaaccatattttctctctcc 46515118  T

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Target: chr3; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 54356269 - 54356362
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||||||||||||||| |||| ||   |||||||| ||||||||||||||||||||   || ||| ||||||| ||||||||||||||||    
T  54356269 aaacaaataatttagtttgtttggatataactatataaaagggattttttgttacaaaatta--gttcaatcttttaaatcatattttctctctcc 54356362  T

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Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 10333101 - 10333194
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||| |||| |||||||||| |||||||   |||||||| ||||||||||||||||||||   || ||| |||||||| |||||||||||||||    
T  10333101 aaacaagtaatctagtttgtttagatacaactatataaaagggattttttgttacaaaatta--gttcaatcttttaaacaatattttctctctcc 10333194  T

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Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 21388507 - 21388414
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||||||| |||||||||| |||||||   |||||||| |||||||||||| |||||||   || ||| |||||||| |||||||||||||||    
T  21388507 aaacaaataatctagtttgtttggatacaactatataaaagggattttttgttataaaatta--gttcaatcttttaaacaatattttctctctcc 21388414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 40285126 - 40285037
Alignment:
Q  5 aaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||| |||||| ||| |||||||   ||||||||  ||||||||||||||||||||  || ||||||||||| ||||||||||||||||    
T  40285126 aaataatctagtttatttggatacaactatataaaaggaattttttgttacaaaattaa--ttcaatattttaaatcatattttctctctcc 40285037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 45586100 - 45586193
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||||||||||||||||||  ||||||   ||||||||| |||||||||||||||||||   || ||| |||| |||||||||||| ||||||    
T  45586100 aaacaaataatttagtttgtttgaatacaacaatataaaagatattttttgttacaaaatta--gttcaatcttttgaaccatattttcactctcc 45586193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 54981887 - 54981980
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||||||| ||||||||||||||||||   |||||||  ||||||||||||||||||||   || ||| |||||||  |||||||||||||||    
T  54981887 aaacaaataatctagtttgttttgatacaactatataaaacggattttttgttacaaaatta--gttcaatcttttaaaatatattttctctctcc 54981980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 11633068 - 11633154
Alignment:
Q  5 aaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctc 93  Q
    ||||||| |||||||||| |||||||   ||||||||||||||||| |||||||||||   || ||| ||||||| |||||||||||||    
T  11633068 aaataatctagtttgtttggatacaactatataaaagagattttttattacaaaatta--gttcaatcttttaaatcatattttctctc 11633154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 21459614 - 21459703
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctct 92  Q
    |||||||||||||||||||| | | |||||   ||||||||  |||||||||||||||||||   |||||| ||||||| ||||||||||||    
T  21459614 aaacaaataatttagtttgtgtaggtacaactatataaaaggaattttttgttacaaaatta--gtttaatcttttaaaacatattttctct 21459703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 26760565 - 26760658
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||||||||||||||||||  ||||||   ||||||||| || |||||||| ||||||||||  |  | |||||||||||||||| |||||||    
T  26760565 aaacaaataatttagtttgtttgaatacaactatataaaagaaatattttgttaaaaaattaattcat--tcttttaaaccatattttttctctcc 26760658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 30498521 - 30498432
Alignment:
Q  5 aaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||| |||||||||||||||||||||   ||||||||||||||| ||||| |||||||   || |||||||| | | |||||||||||||||    
T  30498521 aaatgatttagtttgttttgatacaactatataaaagagattttctgttataaaatta--gttcaatattttgatctatattttctctctcc 30498432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 10317246 - 10317321
Alignment:
Q  16 tttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctc 93  Q
    ||||||||||||||||  || ||||||||||||| ||||||||||||   || ||| ||| |||||||||||||||||    
T  10317246 tttgttttgatacaaatataaaaaagagatttttcgttacaaaatta--gttcaatttttaaaaccatattttctctc 10317321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 24485681 - 24485623
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaa 59  Q
    |||||||||||||||||||||| |||||||   ||||||| || |||||||||||||||    
T  24485681 aaacaaataatttagtttgtttggatacaactatataaaataggttttttgttacaaaa 24485623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3942665 - 3942604
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    ||||||||||| ||||||||||  ||||||   |||||||| ||||||||||||||||||||    
T  3942665 aaacaaataatctagtttgtttgaatacaactatataaaagggattttttgttacaaaatta 3942604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 33832809 - 33832862
Alignment:
Q  12 ttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatt 65  Q
    ||||||||||| |||||||   ||||||||||||||||||| ||||||||||||    
T  33832809 ttagtttgtttggatacaactatataaaagagattttttgtcacaaaattaatt 33832862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 42583594 - 42583651
Alignment:
Q  2 aacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaa 59  Q
    |||||||||||||||||||||  ||||||   ||||||||||||||||||||| ||||    
T  42583594 aacaaataatttagtttgtttgaatacaactatataaaagagattttttgttataaaa 42583651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 3789734 - 3789794
Alignment:
Q  5 aaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatt 65  Q
    |||| ||||||||||||| |||||||   ||||||||  ||||||||||||||||||||||    
T  3789734 aaattatttagtttgtttggatacaattatataaaagttattttttgttacaaaattaatt 3789794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 7433687 - 7433598
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctct 92  Q
    ||||||||||| ||| |||||| |||||||   |||||||   |||||||||||||||||||   |||||| ||||||| ||||||||||||    
T  7433687 aaacaaataatctagcttgtttggatacaactatataaaatgaattttttgttacaaaatta--gtttaatcttttaaatcatattttctct 7433598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 30917800 - 30917856
Alignment:
Q  34 tataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctct 92  Q
    |||||||| |||||||||||||||| ||||  ||||||||||| | |||||||||||||    
T  30917800 tataaaagcgattttttgttacaaatttaa--tttaatattttgatccatattttctct 30917856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 3942498 - 3942460
Alignment:
Q  137 tttttagattctgattttattaaaaagcagtaacaaacg 175  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  3942498 tttttagattctgatttttttaaaaagctgtaacaaacg 3942460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 12101065 - 12101152
Alignment:
Q  5 aaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctct 94  Q
    ||||||| || ||||||| |||| ||   |||||||||||| ||||||||||||||||   || ||| |||||||| |||||||||||||    
T  12101065 aaataatctaatttgtttggatataactatataaaagagatgttttgttacaaaatta--gttcaatcttttaaacaatattttctctct 12101152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 26167973 - 26167913
Alignment:
Q  5 aaataatttagtttgttttgatacaaacttataaaagagatt---ttttgttacaaaatta 62  Q
    |||||||||||||||||| |||||||   |||||||||||||   ||||||||||||||||    
T  26167973 aaataatttagtttgtttggatacaactatataaaagagatttttttttgttacaaaatta 26167913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 66
Target Start/End: Original strand, 43185627 - 43185657
Alignment:
Q  36 taaaagagattttttgttacaaaattaattt 66  Q
    |||||||||||||||||||||||||||||||    
T  43185627 taaaagagattttttgttacaaaattaattt 43185657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 10332771 - 10332711
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    |||||||||||| ||||||||| |||||||   |||||||| || |||||||||||||||||    
T  10332771 aaacaaataattcagtttgtttggatacaactatataaaaggga-tttttgttacaaaatta 10332711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 54981693 - 54981664
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  54981693 aaacaaataatttagtttgttttgatacaa 54981664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 195
Target Start/End: Complemental strand, 21388343 - 21388283
Alignment:
Q  137 tttttagattctgattttattaaaaagcagtaacaaac-gatgcaacac-cttaaaagtga 195  Q
    |||||||||||||||||| ||| ||||| ||||||||| ||||||| || |||||||||||    
T  21388343 tttttagattctgatttttttagaaagctgtaacaaacggatgcaaaactcttaaaagtga 21388283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 47567724 - 47567631
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||||||| || ||||||| ||||| |   |||||||| |||||||||||||||| |||   || ||| |||||| | |||||||||||||||    
T  47567724 aaacaaataatataatttgtttggatactactatataaaagggattttttgttacaaagtta--gttcaatcttttaagcaatattttctctctcc 47567631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 53877641 - 53877734
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||||||||||| ||| |||| ||   |||||||| |||| |||||| |||||| |   || ||| ||||||| ||||||||||||||||    
T  53877641 aaacaaataatttagtttatttagatataactatataaaagggattatttgttgcaaaatca--gttcaatcttttaaatcatattttctctctcc 53877734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 54142993 - 54143086
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||| ||| ||||| |||| ||||| |   |||||||  ||||||||||||||||||||   || ||| |||||||| |||||||||||||||    
T  54142993 aaacaaaaaatctagttagtttggatacgactatataaaatggattttttgttacaaaatta--gttcaattttttaaacaatattttctctctcc 54143086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 9e-17; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 28022359 - 28022423
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatt 65  Q
    |||||||||||||||||||||| |||||||   |||||||||||||||||||||||||| |||||    
T  28022359 aaacaaataatttagtttgtttggatacaactatataaaagagattttttgttacaaaactaatt 28022423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 342769 - 342712
Alignment:
Q  5 aaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    |||||||||||||||||| |||||||   |||||||||||||||||||||||||||||    
T  342769 aaataatttagtttgtttggatacaactatataaaagagattttttgttacaaaatta 342712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13916532 - 13916593
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    |||||||||||||||||||||| |||||||   |||||||| ||||||||||||||||||||    
T  13916532 aaacaaataatttagtttgtttggatacaactatataaaagggattttttgttacaaaatta 13916593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 5424580 - 5424492
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctct 92  Q
    |||||||||||| ||||||||| |||||||   ||||||||||| ||||||||||||||||  | || ||| ||||||||||||||||||||    
T  5424580 aaacaaataatt-agtttgtttggatacaactatataaaagagactttttgttacaaaatt--tgttcaatcttttaaaccatattttctct 5424492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 27882183 - 27882243
Alignment:
Q  5 aaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatt 65  Q
    |||||||||||||||||| |||||||   |||||||||||||||||||||||||| |||||    
T  27882183 aaataatttagtttgtttggatacaactatataaaagagattttttgttacaaaactaatt 27882243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 35308231 - 35308136
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagaga--ttttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||||||||||||||| |||||||   |||||||| ||  ||||||||||||||||||   || ||| ||||||| ||||||||||||||||    
T  35308231 aaacaaataatttagtttgtttggatacaactatataaaagggattttttttgttacaaaatta--gttcaatcttttaaatcatattttctctctcc 35308136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 5424770 - 5424864
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagaga-ttttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||||||||||||||| |||||||   |||||||| || ||||||||||||||||||   || ||| ||||||| ||||||||| ||||||    
T  5424770 aaacaaataatttagtttgtttggatacaactatataaaagggatttttttgttacaaaatta--gttcaatcttttaaagcatattttcactctcc 5424864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 27881312 - 27881373
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    ||||||||||| |||||||||| |||||||   ||||||||| |||||||||||||||||||    
T  27881312 aaacaaataatctagtttgtttggatacaactatataaaagaaattttttgttacaaaatta 27881373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 27917535 - 27917596
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    ||||||||||| |||||||||| |||||||   ||||||||| |||||||||||||||||||    
T  27917535 aaacaaataatctagtttgtttggatacaactatataaaagaaattttttgttacaaaatta 27917596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 27963954 - 27964015
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    ||||||||||| |||||||||| |||||||   ||||||||| |||||||||||||||||||    
T  27963954 aaacaaataatctagtttgtttggatacaactatataaaagaaattttttgttacaaaatta 27964015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28021493 - 28021554
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    ||||||||||| |||||||||| |||||||   ||||||||| |||||||||||||||||||    
T  28021493 aaacaaataatctagtttgtttggatacaactatataaaagaaattttttgttacaaaatta 28021554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 6007671 - 6007764
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||||||| ||||||||||  ||||||   |||||||| ||||||||||| ||||||||   || ||| ||||||| ||||||||||||||||    
T  6007671 aaacaaataatctagtttgtttgaatacaactatataaaagggattttttgttgcaaaatta--gttcaatcttttaaatcatattttctctctcc 6007764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 40737426 - 40737486
Alignment:
Q  2 aacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    |||||||||| |||||||||| |||||||   ||||||||| |||||||||||||||||||    
T  40737426 aacaaataatctagtttgtttggatacaactatataaaagaaattttttgttacaaaatta 40737486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 27964814 - 27964872
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaa 59  Q
    |||||||||||| ||||||||| |||||||   |||||||| |||||||||||||||||    
T  27964814 aaacaaataattgagtttgtttggatacaactatataaaagggattttttgttacaaaa 27964872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 5764880 - 5764973
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||||||| |  ||||||| |||||||   |||||||| |||||||||||||||| |||   || |||||||||| | |||||||||||||||    
T  5764880 aaacaaataatctgatttgtttggatacaactatataaaagggattttttgttacaaagtta--cttcaatattttaagcaatattttctctctcc 5764973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 1030384 - 1030441
Alignment:
Q  5 aaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    |||| |||| |||||||| |||||||   |||||||| ||||||||||||||||||||    
T  1030384 aaattatttggtttgtttggatacaactatataaaagtgattttttgttacaaaatta 1030441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6008028 - 6008089
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    |||||||| || ||||||||||  ||||||   |||||||| ||||||||||||||||||||    
T  6008028 aaacaaattatctagtttgtttgcatacaattatataaaagggattttttgttacaaaatta 6008089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 195
Target Start/End: Complemental strand, 1028986 - 1028926
Alignment:
Q  137 tttttagattctgattttattaaaaagcagtaacaaac-gatgcaacac-cttaaaagtga 195  Q
    |||||||||||||||||| ||||||||  ||||||||| ||||||| || |||||||||||    
T  1028986 tttttagattctgatttttttaaaaagttgtaacaaacggatgcaagactcttaaaagtga 1028926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 1153924 - 1153984
Alignment:
Q  137 tttttagattctgattttattaaaaagcagtaacaaac-gatgcaacac-cttaaaagtga 195  Q
    |||||||||||||||||| ||||||||  ||||||||| ||||||| || |||||||||||    
T  1153924 tttttagattctgatttttttaaaaagttgtaacaaacggatgcaaaactcttaaaagtga 1153984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 17073286 - 17073379
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||| ||| |||||||||| |||| || | | |||||   ||||||||||||||||||| ||   ||| |||||||| |||||||||||||||    
T  17073286 aaacaaacaatctagtttgtttggatataaccgtgtaaaatgaattttttgttacaaaattagttc--aatcttttaaacaatattttctctctcc 17073379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 17574984 - 17574891
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||| ||| |||||||||| |||| || | | |||||   ||||||||||||||||||| ||   ||| |||||||| |||||||||||||||    
T  17574984 aaacaaacaatctagtttgtttggatataaccgtgtaaaatgaattttttgttacaaaattagttc--aatcttttaaacaatattttctctctcc 17574891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 24981511 - 24981571
Alignment:
Q  5 aaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatt 65  Q
    ||||||||||||||||||  |||| |   | |||||| |||||||||||||||||||||||    
T  24981511 aaataatttagtttgtttgaatacgactatgtaaaagggattttttgttacaaaattaatt 24981571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 9e-17; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 14787201 - 14787294
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||||||| || ||||||| |||||||   | ||||||||||||||||||||||||||||  || ||| |||||||| |||||||||||||||    
T  14787201 aaacaaataatctaatttgtttggatacaactatctaaaagagattttttgttacaaaattaa--ttcaatcttttaaacaatattttctctctcc 14787294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 40662839 - 40662750
Alignment:
Q  5 aaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||||||||||| |||||||   |||||||| ||||||||||||||||||||   || ||| ||||||| ||||||||||||||||    
T  40662839 aaataatttagtttgtttggatacaactatataaaagggattttttgttacaaaatta--gttcaattttttaaatcatattttctctctcc 40662750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 43968297 - 43968210
Alignment:
Q  5 aaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctct 94  Q
    |||||||||||||||||| |||||||   |||||||||||||||||||||||||||||   || ||| |||||| || ||||||||||||    
T  43968297 aaataatttagtttgtttggatacaacgatataaaagagattttttgttacaaaatta--gttcaatcttttaacccttattttctctct 43968210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 15458946 - 15459035
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctct 92  Q
    ||||||||||||| |||||||| |||||||   |||||||| ||||||||||||||||||||   || |||| || ||||||||||||||||    
T  15458946 aaacaaataatttggtttgtttggatacaactatataaaagtgattttttgttacaaaatta--gttcaatacttaaaaccatattttctct 15459035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 30632215 - 30632292
Alignment:
Q  13 tagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctct 92  Q
    |||||||||| |||||||   ||||||||||||||||||||||||||||||  || ||| ||||||| ||||||||||||    
T  30632215 tagtttgtttggatacaactatataaaagagattttttgttacaaaattaa--ttcaatcttttaaatcatattttctct 30632292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 3196995 - 3197052
Alignment:
Q  5 aaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    |||||||||||||||||||||||||    |||||||| ||||||||||||||||||||    
T  3196995 aaataatttagtttgttttgatacagctatataaaagtgattttttgttacaaaatta 3197052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7495584 - 7495644
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaatt 61  Q
    ||||||||||| |||||||||| |||||||   |||||||| |||||||||||||||||||    
T  7495584 aaacaaataatctagtttgtttggatacaactatataaaagggattttttgttacaaaatt 7495644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 30666273 - 30666353
Alignment:
Q  13 tagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctc 95  Q
    ||||||||||  |||||||  |||||||| |||||||||||||||||||  | || ||| ||||||| |||||||||||||||    
T  30666273 tagtttgtttgaatacaaatatataaaagggattttttgttacaaaatt--tgttcaatcttttaaatcatattttctctctc 30666353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 20612700 - 20612787
Alignment:
Q  7 ataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||| |||||| ||| |||||||   |||||||| ||||||||||| ||||||||   |||||| |||||||||||||||| |||||||    
T  20612700 ataatctagtttatttagatacaactatataaaagggattttttgtttcaaaatta--gtttaatcttttaaaccatattttttctctcc 20612787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 39844302 - 39844212
Alignment:
Q  4 caaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||| |||||||||| |||||||   |||||||| |||||| |||||||||||||   || ||| | |||||| |||||||||||||||    
T  39844302 caaataatctagtttgtttggatacaactatataaaagggattttctgttacaaaatta--gttcaatctattaaacaatattttctctctcc 39844212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 43968652 - 43968562
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctc 93  Q
    ||||||||||| |||| || || |||||||   |||||||| ||||||||||||||||||||   || ||| ||||||| |||||||||||||    
T  43968652 aaacaaataatctagtgtgcttggatacaactatataaaagggattttttgttacaaaatta--gttcaatcttttaaatcatattttctctc 43968562  T

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Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 9420261 - 9420350
Alignment:
Q  5 aaataatttagtttgttttgatacaaacttataaaagagatttttt-gttacaaaattaatttttaatattttaaaccatattttctctctc 95  Q
    ||||| |||| ||||||| |||||||   |||||||  |||||||| |||||||||||| |||  ||||||||||||||||||| |||||||    
T  9420261 aaatattttaatttgtttggatacaactatataaaatggatttttttgttacaaaattagttt--aatattttaaaccatatttcctctctc 9420350  T

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Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 42676465 - 42676554
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctct 92  Q
    ||||||| ||| ||||||||||  ||||||   |||||||| ||||||||||||||||||||   || ||| ||||||| ||||||||||||    
T  42676465 aaacaaaaaatctagtttgtttgcatacaactatataaaagggattttttgttacaaaatta--gttcaatcttttaaatcatattttctct 42676554  T

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Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 3256102 - 3256197
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagaga--ttttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||||||||||||||||||  ||||||   |||||||||||  |||||||||| ||||||    || ||| ||||||| ||||||||||||||||    
T  3256102 aaacaaataatttagtttgtttgtatacaactatataaaagagattttttttgttaaaaaatt--ggttcaatcttttaaatcatattttctctctcc 3256197  T

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Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 34454177 - 34454257
Alignment:
Q  13 tagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctc 95  Q
    |||||||||| ||||||    |||||||| |||||||| ||||||||||||  ||||||||||| |  |||||||||||||||    
T  34454177 tagtttgtttggatacatctatataaaagcgattttttcttacaaaattaa--tttaatattttgattcatattttctctctc 34454257  T

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Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 21479406 - 21479468
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagatttttt-gttacaaaatta 62  Q
    ||||||||||| |||||||||| |||||||   |||||||| |||||||| ||||||||||||    
T  21479406 aaacaaataatctagtttgtttggatacaactatataaaagggattttttcgttacaaaatta 21479468  T

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Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 21479209 - 21479270
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    ||||||||||| |||||||||| |||||||    |||||||  |||||||||||||||||||    
T  21479209 aaacaaataatctagtttgtttggatacaactacataaaaggcattttttgttacaaaatta 21479270  T

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Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 38722851 - 38722908
Alignment:
Q  5 aaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaatta 62  Q
    ||||||||||||||||||  ||||||   ||||||| ||||||||| |||||||||||    
T  38722851 aaataatttagtttgtttgaatacaactatataaaatagattttttattacaaaatta 38722908  T

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Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 173
Target Start/End: Original strand, 21479567 - 21479603
Alignment:
Q  137 tttttagattctgattttattaaaaagcagtaacaaa 173  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  21479567 tttttagattctgatttttttaaaaagctgtaacaaa 21479603  T

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Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 30668856 - 30668937
Alignment:
Q  13 tagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||| |||||||   ||||||   ||||||||||||||||||||   || ||| ||||||| ||||||||||||||||    
T  30668856 tagtttgtttggatacaattatataaacatgattttttgttacaaaatta--gttcaatcttttaaatcatattttctctctcc 30668937  T

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Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 36950421 - 36950336
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatatttt 88  Q
    ||||||| ||| |||||||||| ||| |||   |||||||  ||||||||||||||||||||   |||||| |||||||| |||||||    
T  36950421 aaacaaacaatctagtttgtttggattcaactatataaaatggattttttgttacaaaatta--gtttaattttttaaacaatatttt 36950336  T

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Target: scaffold0016 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 205245 - 205337
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||||||| |||||||||| |||||||   ||||||||| |||||||||||||||||||   || ||| |||||||| |||||||||||||||    
T  205245 aaacaaataatctagtttgtttagatacaactatataaaaga-attttttgttacaaaatta--gttcaatcttttaaacaatattttctctctcc 205337  T

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Target: scaffold0016; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 106165 - 106072
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    ||||||||||| | |||||||| |||||||   |||||||  ||||||||||||||||||||   || ||| ||||||| ||||||||||||||||    
T  106165 aaacaaataatcttgtttgtttggatacaactatataaaaaggattttttgttacaaaatta--gttcaatcttttaaatcatattttctctctcc 106072  T

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Target: scaffold0224 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 21988 - 22079
Alignment:
Q  1 aaacaaataatttagtttgttttgatacaaact-tataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||||||||||||||| ||||   ||| |||||||| ||||||||||||||||||||   || ||| |||||| | |||||||||||||||    
T  21988 aaacaaataatttagtttgtttggata---actatataaaagggattttttgttacaaaatta--gttcaatcttttaatctatattttctctctcc 22079  T

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Target: scaffold0376 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 2029 - 1938
Alignment:
Q  2 aacaaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||| ||||||||||||| ||||   |||||| | ||||||||||||||||||||   |||||| ||||||| | || |||||||||||    
T  2029 aacaaataatctagtttgttttgagacaactatataaagg-gattttttgttacaaaatta--gtttaatcttttaaatcgtaatttctctctcc 1938  T

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Target: scaffold0267 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 3243 - 3294
Alignment:
Q  14 agtttgttttgatacaaacttataaaagagattttttgttacaaaattaatt 65  Q
    ||||||||| |||||||   |||||||| |||||||||||||||||||||||    
T  3243 agtttgtttggatacaactatataaaagtgattttttgttacaaaattaatt 3294  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 150280 - 150191
Alignment:
Q  5 aaataatttagtttgttttgatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 96  Q
    |||||||||  ||||||| ||| |||   |||||||| |||||||| | ||||||||| ||   ||| ||||||||||||||||||||||||    
T  150280 aaataatttgatttgtttggatgcaattatataaaagggattttttataacaaaattagttc--aatcttttaaaccatattttctctctcc 150191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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