View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20911_high_10 (Length: 255)
Name: NF20911_high_10
Description: NF20911
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20911_high_10 |
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Alignment Details
Target: chr1 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 36923674 - 36923913
Alignment:
| Q |
1 |
tggcagagaacctgccaaatcaggttaggcttctatatttgttgttttgttcttcatttatgtctttannnnnnngaatattttataattgagacgttag |
100 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
36923674 |
tggcagagaacctgccaaatcaggttaggcttctatttttgttgttttgttcttcatttatgtctttatttttttgaatattttataattgagacgttag |
36923773 |
T |
|
| Q |
101 |
cggaacctaatgtctggctttctagaatcacactaataatttgcatgatagtatacttcaaatttgcattgaccaatgtacactgccttagattgaaatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36923774 |
cggaacctaatgtctggctttctagaatcacactaataatttgcatgatagtatacttcaaatttgcattgaccaatgtacactgccttagattgaaatt |
36923873 |
T |
|
| Q |
201 |
tggttagtcaagacaaggtagtaca-ttttgagttatatg |
239 |
Q |
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||||||||||||||||||||||||| |||||||||||||| |
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| T |
36923874 |
tggttagtcaagacaaggtagtacatttttgagttatatg |
36923913 |
T |
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